cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i 1136_5L2-T1-TDNA-1_A23MHWWLT4_1.md.bam --algo AlignmentStat 1136_5L2-T1-TDNA-1_A23MHWWLT4_1.sentieon.alignment_summary_metrics --algo InsertSizeMetricAlgo 1136_5L2-T1-TDNA-1_A23MHWWLT4_1.sentieon.insert_size_metrics --algo QualDistribution 1136_5L2-T1-TDNA-1_A23MHWWLT4_1.sentieon.quality_distribution_metrics --algo BaseDistributionByCycle 1136_5L2-T1-TDNA-1_A23MHWWLT4_1.sentieon.base_distribution_by_cycle_metrics --algo MeanQualityByCycle 1136_5L2-T1-TDNA-1_A23MHWWLT4_1.sentieon.quality_by_cycle_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:160000001, elapsed 8.7s, est remaining 166.0s, peak mem 2991MB, user 216.0s, sys 2.1s, output queue size 146
progress 10% @chr1:205000001, elapsed 16.0s, est remaining 144.2s, peak mem 4279MB, user 444.2s, sys 3.8s, output queue size 117
progress 15% @chr3:13000001, elapsed 24.2s, est remaining 137.4s, peak mem 6167MB, user 681.8s, sys 5.1s, output queue size 203
progress 20% @chr3:174000001, elapsed 30.8s, est remaining 123.1s, peak mem 6273MB, user 882.0s, sys 6.7s, output queue size 283
progress 25% @chr4:133000001, elapsed 36.3s, est remaining 108.9s, peak mem 6273MB, user 1067.8s, sys 7.5s, output queue size 302
progress 30% @chr4:186000001, elapsed 40.8s, est remaining 95.1s, peak mem 6429MB, user 1205.2s, sys 8.1s, output queue size 464
progress 35% @chr6:91000001, elapsed 47.0s, est remaining 87.3s, peak mem 6613MB, user 1378.0s, sys 8.8s, output queue size 625
progress 40% @chr7:79000001, elapsed 55.3s, est remaining 82.9s, peak mem 7092MB, user 1577.5s, sys 9.5s, output queue size 786
progress 45% @chr8:75000001, elapsed 63.7s, est remaining 77.9s, peak mem 7387MB, user 1849.2s, sys 10.6s, output queue size 948
progress 50% @chr9:102000001, elapsed 71.4s, est remaining 71.4s, peak mem 7543MB, user 2034.9s, sys 11.2s, output queue size 1110
progress 55% @chr10:73000001, elapsed 81.1s, est remaining 66.3s, peak mem 7602MB, user 2350.0s, sys 12.0s, output queue size 527
progress 60% @chr12:2000001, elapsed 89.8s, est remaining 59.8s, peak mem 7602MB, user 2631.0s, sys 12.7s, output queue size 689
progress 65% @chr12:113000001, elapsed 99.5s, est remaining 53.6s, peak mem 7602MB, user 2924.2s, sys 13.5s, output queue size 672
progress 70% @chr14:69000001, elapsed 105.0s, est remaining 45.0s, peak mem 7680MB, user 3074.4s, sys 13.9s, output queue size 833
progress 75% @chr16:42000001, elapsed 115.2s, est remaining 38.4s, peak mem 7715MB, user 3338.2s, sys 14.5s, output queue size 995
progress 80% @chr18:29000001, elapsed 127.8s, est remaining 32.0s, peak mem 7720MB, user 3722.8s, sys 15.6s, output queue size 1157
progress 85% @chr19:42000001, elapsed 139.9s, est remaining 24.7s, peak mem 7756MB, user 4136.1s, sys 16.7s, output queue size 785
progress 90% @chrX:34000001, elapsed 146.9s, est remaining 16.3s, peak mem 7882MB, user 4401.0s, sys 17.7s, output queue size 947
progress 95% @chrY:55000001, elapsed 151.1s, est remaining 8.0s, peak mem 7882MB, user 4493.2s, sys 18.0s, output queue size 1109
progress 100% @chr15:88000001, elapsed 165.1s, est remaining 0.0s, peak mem 7882MB, user 4760.2s, sys 18.7s, output queue size 4099
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 192
algo: AlignmentStat InsertSizeMetricAlgo QualDistribution BaseDistributionByCycle MeanQualityByCycle
license: sentieon:Metrics=31
input file size: 52593107263
reads: 1002659546
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 830.371 user 15.885 sys 850.715 real
done: 1 calls 0.034 user 0.000 sys 0.044 real
exec_no_coor: 1 calls 0.014 user 0.000 sys 0.017 real
execute: 1 calls 0.003 user 0.002 sys 165.402 real
idle: 401 calls 0.148 user 0.000 sys 368.892 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 8264892416 mem 4762.403 user 18.938 sys 166.378 real