This software is licensed to bgold@natera.com by Sentieon Inc. cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/util sort -r Homo_sapiens_assembly38.fasta -t 31 -o 1136_27F-T1-TDNA-1_A23MHWWLT4_1.bam --sam2bam - This software is licensed to bgold@natera.com by Sentieon Inc. No more license available for sentieon:klib version: sentieon-genomics-202308.03 No more license available for sentieon:klib [M::bwa_idx_load_from_disk] read 3171 ALT contigs No more license available for sentieon:klib No more license available for sentieon:klib No more license available for sentieon:klib No more license available for sentieon:klib No more license available for sentieon:klib No more license available for sentieon:klib No more license available for sentieon:klib No more license available for sentieon:klib [M::main_mem] bwa index loaded in 1788.788 CPU sec, 608.883 real sec [M::process] read 700560 sequences (100000046 bp) in 0.959 CPU sec, 0.968 real sec... [M::process] read 700456 sequences (100000084 bp) in 1.240 CPU sec, 1.235 real sec... [M::process] read 699956 sequences (100000019 bp) in 1.289 CPU sec, 1.294 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (68, 291597, 25, 74) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (152, 272, 684) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1748) [M::mem_pestat] mean and std.dev: (413.27, 368.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2280) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (158, 235, 340) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 704) [M::mem_pestat] mean and std.dev: (259.52, 129.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 886) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (183, 376, 2726) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7812) [M::mem_pestat] mean and std.dev: (1206.12, 1721.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 10355) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (161, 264, 618) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1532) [M::mem_pestat] mean and std.dev: (365.00, 315.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1989) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 699446 sequences (100000211 bp) in 1.169 CPU sec, 1.170 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (62, 292122, 11, 55) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (128, 212, 495) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1229) [M::mem_pestat] mean and std.dev: (263.85, 203.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1596) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (158, 236, 342) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 710) [M::mem_pestat] mean and std.dev: (260.72, 130.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 894) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (585, 1196, 2212) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5466) [M::mem_pestat] mean and std.dev: (1278.27, 843.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7093) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (169, 259, 732) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1858) [M::mem_pestat] mean and std.dev: (401.08, 388.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2421) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (66, 292032, 15, 69) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (146, 223, 493) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1187) [M::mem_pestat] mean and std.dev: (269.36, 184.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1534) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (160, 238, 347) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 721) [M::mem_pestat] mean and std.dev: (263.37, 131.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 908) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (512, 586, 1010) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2006) [M::mem_pestat] mean and std.dev: (726.50, 361.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2504) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (171, 250, 468) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1062) [M::mem_pestat] mean and std.dev: (328.39, 235.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1359) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 700560 reads in 216.004 CPU sec, 6.870 real sec [M::mem_process_seqs] Processed 700456 reads in 141.640 CPU sec, 4.553 real sec [M::mem_process_seqs] Processed 699956 reads in 153.399 CPU sec, 4.953 real sec sorting block 0, #reads = 1091556 mem = 536880464 peak = 590557184 [M::process] read 697338 sequences (100000013 bp) in 1.848 CPU sec, 2.017 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (55, 292148, 21, 57) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (174, 303, 917) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2403) [M::mem_pestat] mean and std.dev: (450.09, 496.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3146) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (160, 239, 349) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 727) [M::mem_pestat] mean and std.dev: (264.87, 133.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 916) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (417, 734, 1789) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4533) [M::mem_pestat] mean and std.dev: (991.20, 875.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5905) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (217, 325, 640) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1486) [M::mem_pestat] mean and std.dev: (405.66, 287.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1909) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 696540 sequences (100000295 bp) in 1.356 CPU sec, 1.378 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (47, 290831, 24, 62) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (163, 246, 346) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 712) [M::mem_pestat] mean and std.dev: (231.45, 105.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 895) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 247, 360) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 752) [M::mem_pestat] mean and std.dev: (273.04, 137.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 948) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (237, 406, 2204) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6138) [M::mem_pestat] mean and std.dev: (1181.09, 1259.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8105) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (227, 370, 873) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2165) [M::mem_pestat] mean and std.dev: (493.21, 359.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2811) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 699446 reads in 133.315 CPU sec, 4.246 real sec sorting block 1, #reads = 1091268 mem = 536880236 peak = 811024384 [M::process] read 696208 sequences (100000262 bp) in 1.253 CPU sec, 1.285 real sec... [M::mem_process_seqs] Processed 697338 reads in 83.981 CPU sec, 2.648 real sec sorting block 2, #reads = 1090431 mem = 536880077 peak = 875458560 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (74, 290598, 26, 61) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (238, 340, 735) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1729) [M::mem_pestat] mean and std.dev: (460.33, 350.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2226) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 249, 363) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 759) [M::mem_pestat] mean and std.dev: (274.81, 137.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 957) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (49, 620, 793) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2281) [M::mem_pestat] mean and std.dev: (479.00, 467.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3025) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (238, 303, 488) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 988) [M::mem_pestat] mean and std.dev: (296.53, 130.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1238) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 694908 sequences (100000025 bp) in 1.744 CPU sec, 1.817 real sec... [M::process] read 694214 sequences (100000082 bp) in 1.264 CPU sec, 1.263 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (64, 290720, 16, 48) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (164, 227, 305) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 587) [M::mem_pestat] mean and std.dev: (213.00, 81.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 728) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 248, 358) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 744) [M::mem_pestat] mean and std.dev: (272.30, 135.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 937) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (372, 564, 1506) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3774) [M::mem_pestat] mean and std.dev: (783.56, 613.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4908) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (252, 447, 673) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1515) [M::mem_pestat] mean and std.dev: (427.21, 252.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1936) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 696540 reads in 132.728 CPU sec, 4.225 real sec [M::mem_process_seqs] Processed 696208 reads in 83.307 CPU sec, 2.654 real sec sorting block 3, #reads = 1088450 mem = 536877640 peak = 875458560 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (84, 290109, 22, 67) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (189, 292, 508) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1146) [M::mem_pestat] mean and std.dev: (342.31, 241.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1465) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (169, 254, 366) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 760) [M::mem_pestat] mean and std.dev: (278.17, 138.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 957) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (247, 920, 1254) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3268) [M::mem_pestat] mean and std.dev: (759.24, 600.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4275) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (186, 296, 606) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1446) [M::mem_pestat] mean and std.dev: (385.62, 289.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1866) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 694492 sequences (100000179 bp) in 1.761 CPU sec, 1.839 real sec... [M::process] read 693820 sequences (100000061 bp) in 1.250 CPU sec, 1.251 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (59, 289653, 35, 72) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (187, 297, 888) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2290) [M::mem_pestat] mean and std.dev: (474.25, 469.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2991) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (170, 255, 366) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 758) [M::mem_pestat] mean and std.dev: (278.63, 137.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 954) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (393, 660, 1033) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2313) [M::mem_pestat] mean and std.dev: (755.91, 560.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2997) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (150, 239, 520) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1260) [M::mem_pestat] mean and std.dev: (355.37, 289.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1630) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 694908 reads in 132.103 CPU sec, 4.203 real sec [M::mem_process_seqs] Processed 694214 reads in 83.472 CPU sec, 2.658 real sec sorting block 4, #reads = 1088293 mem = 536881150 peak = 875458560 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (73, 289923, 23, 82) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (192, 266, 708) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1740) [M::mem_pestat] mean and std.dev: (347.67, 261.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2256) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (169, 253, 364) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 754) [M::mem_pestat] mean and std.dev: (276.47, 136.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 949) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (139, 501, 1015) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2767) [M::mem_pestat] mean and std.dev: (566.05, 591.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3643) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (184, 283, 559) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1309) [M::mem_pestat] mean and std.dev: (324.88, 189.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1684) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 693278 sequences (100000292 bp) in 1.883 CPU sec, 2.061 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (89, 289775, 26, 70) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (167, 288, 641) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1589) [M::mem_pestat] mean and std.dev: (400.08, 319.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2063) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (171, 256, 366) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 756) [M::mem_pestat] mean and std.dev: (278.39, 136.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 951) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (93, 498, 1506) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4332) [M::mem_pestat] mean and std.dev: (838.76, 846.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5745) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (163, 317, 801) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2077) [M::mem_pestat] mean and std.dev: (438.19, 397.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2715) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 700024 sequences (100000009 bp) in 1.304 CPU sec, 1.304 real sec... [M::mem_process_seqs] Processed 694492 reads in 132.732 CPU sec, 4.225 real sec sorting block 5, #reads = 1087007 mem = 536877773 peak = 875458560 [M::mem_process_seqs] Processed 693820 reads in 83.346 CPU sec, 2.643 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (66, 289559, 25, 49) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (181, 307, 733) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1837) [M::mem_pestat] mean and std.dev: (387.98, 348.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2389) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 259, 370) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 766) [M::mem_pestat] mean and std.dev: (281.41, 138.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 964) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (195, 749, 1175) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3135) [M::mem_pestat] mean and std.dev: (645.87, 506.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4115) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (182, 299, 857) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2207) [M::mem_pestat] mean and std.dev: (454.42, 408.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2882) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 6, #reads = 1087583 mem = 536887623 peak = 875458560 [M::process] read 700520 sequences (100000224 bp) in 2.126 CPU sec, 2.278 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (60, 291375, 18, 55) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (185, 278, 421) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 893) [M::mem_pestat] mean and std.dev: (279.92, 133.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1129) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (159, 237, 345) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 717) [M::mem_pestat] mean and std.dev: (262.20, 131.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 903) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (223, 228, 1357) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3625) [M::mem_pestat] mean and std.dev: (672.47, 707.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4759) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (207, 290, 559) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1263) [M::mem_pestat] mean and std.dev: (328.27, 257.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1615) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 699878 sequences (100000286 bp) in 1.310 CPU sec, 1.309 real sec... [M::mem_process_seqs] Processed 693278 reads in 133.895 CPU sec, 4.256 real sec [M::mem_process_seqs] Processed 700024 reads in 85.232 CPU sec, 2.703 real sec sorting block 7, #reads = 1086568 mem = 536879340 peak = 875458560 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (55, 292146, 36, 75) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (144, 268, 429) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 999) [M::mem_pestat] mean and std.dev: (290.12, 200.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1284) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (158, 236, 345) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 719) [M::mem_pestat] mean and std.dev: (262.26, 132.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 906) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (159, 667, 1490) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4152) [M::mem_pestat] mean and std.dev: (863.89, 915.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5483) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (201, 302, 839) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2115) [M::mem_pestat] mean and std.dev: (439.84, 365.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2753) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 698790 sequences (100000186 bp) in 1.917 CPU sec, 2.076 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (56, 291662, 32, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (204, 401, 826) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2070) [M::mem_pestat] mean and std.dev: (424.00, 330.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2692) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (159, 239, 350) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 732) [M::mem_pestat] mean and std.dev: (265.18, 134.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 923) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (277, 585, 1458) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3820) [M::mem_pestat] mean and std.dev: (579.74, 454.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5001) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (252, 353, 728) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1680) [M::mem_pestat] mean and std.dev: (446.91, 393.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2156) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 697384 sequences (100000284 bp) in 1.340 CPU sec, 1.343 real sec... [M::mem_process_seqs] Processed 700520 reads in 133.138 CPU sec, 4.243 real sec [M::mem_process_seqs] Processed 699878 reads in 84.507 CPU sec, 2.683 real sec sorting block 8, #reads = 1092002 mem = 536880342 peak = 875458560 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (65, 291507, 33, 62) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (176, 290, 555) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1313) [M::mem_pestat] mean and std.dev: (299.29, 203.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1692) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (162, 242, 355) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 741) [M::mem_pestat] mean and std.dev: (269.02, 136.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 934) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (472, 837, 1684) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4108) [M::mem_pestat] mean and std.dev: (880.32, 604.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5320) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (202, 317, 722) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1762) [M::mem_pestat] mean and std.dev: (445.37, 366.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2282) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 696874 sequences (100000112 bp) in 2.227 CPU sec, 2.363 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (83, 290742, 33, 68) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (176, 266, 489) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1115) [M::mem_pestat] mean and std.dev: (306.21, 205.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1428) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 248, 362) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 758) [M::mem_pestat] mean and std.dev: (274.17, 138.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 956) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (166, 1022, 1444) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4000) [M::mem_pestat] mean and std.dev: (990.60, 1001.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5278) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (259, 385, 714) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1624) [M::mem_pestat] mean and std.dev: (431.03, 283.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2079) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 695922 sequences (100000218 bp) in 1.380 CPU sec, 1.381 real sec... [M::mem_process_seqs] Processed 698790 reads in 133.294 CPU sec, 4.233 real sec [M::mem_process_seqs] Processed 697384 reads in 83.845 CPU sec, 2.658 real sec sorting block 9, #reads = 1090576 mem = 536878809 peak = 875458560 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (56, 290934, 41, 74) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (162, 345, 618) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1530) [M::mem_pestat] mean and std.dev: (393.79, 308.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1986) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 250, 365) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 765) [M::mem_pestat] mean and std.dev: (275.56, 139.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 965) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (129, 616, 1418) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3996) [M::mem_pestat] mean and std.dev: (743.05, 715.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5285) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (181, 315, 723) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1807) [M::mem_pestat] mean and std.dev: (448.81, 420.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2349) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 694672 sequences (100000231 bp) in 2.009 CPU sec, 2.151 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (79, 290227, 26, 92) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (163, 337, 529) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1261) [M::mem_pestat] mean and std.dev: (369.96, 247.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1627) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 252, 366) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 764) [M::mem_pestat] mean and std.dev: (276.51, 138.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 963) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (237, 834, 1739) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4743) [M::mem_pestat] mean and std.dev: (1035.76, 1068.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6245) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (172, 263, 568) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1360) [M::mem_pestat] mean and std.dev: (358.23, 304.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1756) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 696874 reads in 134.042 CPU sec, 4.272 real sec [M::process] read 694120 sequences (100000007 bp) in 1.419 CPU sec, 1.413 real sec... sorting block 10, #reads = 1090181 mem = 536881396 peak = 875458560 [M::mem_process_seqs] Processed 695922 reads in 85.290 CPU sec, 2.695 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (70, 290228, 29, 54) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (179, 294, 692) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1718) [M::mem_pestat] mean and std.dev: (343.39, 279.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2231) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (169, 255, 368) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 766) [M::mem_pestat] mean and std.dev: (279.28, 138.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 965) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (83, 431, 1203) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3443) [M::mem_pestat] mean and std.dev: (597.90, 541.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4563) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (194, 313, 566) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1310) [M::mem_pestat] mean and std.dev: (344.09, 233.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1682) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 11, #reads = 1089152 mem = 536877959 peak = 936345600 [M::process] read 694382 sequences (100000143 bp) in 2.319 CPU sec, 2.497 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (63, 289584, 31, 59) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (166, 256, 605) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1483) [M::mem_pestat] mean and std.dev: (360.13, 267.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1922) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (170, 256, 368) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 764) [M::mem_pestat] mean and std.dev: (279.48, 138.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 962) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (203, 377, 854) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2156) [M::mem_pestat] mean and std.dev: (524.41, 470.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2807) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (247, 430, 715) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1651) [M::mem_pestat] mean and std.dev: (401.98, 248.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2119) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 694672 reads in 132.473 CPU sec, 4.208 real sec [M::process] read 694454 sequences (100000022 bp) in 1.380 CPU sec, 1.381 real sec... [M::mem_process_seqs] Processed 694120 reads in 84.633 CPU sec, 2.675 real sec sorting block 12, #reads = 1086963 mem = 536881869 peak = 936345600 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (56, 289674, 26, 66) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (182, 310, 718) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1790) [M::mem_pestat] mean and std.dev: (371.68, 360.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2326) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (169, 254, 365) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 757) [M::mem_pestat] mean and std.dev: (277.16, 136.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 953) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (246, 667, 1290) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3378) [M::mem_pestat] mean and std.dev: (737.67, 690.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4422) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (193, 282, 596) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1402) [M::mem_pestat] mean and std.dev: (339.97, 233.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1805) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 694224 sequences (100000060 bp) in 1.985 CPU sec, 2.086 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (60, 289935, 23, 68) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (135, 185, 474) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1152) [M::mem_pestat] mean and std.dev: (222.90, 135.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1491) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (169, 254, 364) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 754) [M::mem_pestat] mean and std.dev: (276.97, 136.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 949) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (135, 429, 1353) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3789) [M::mem_pestat] mean and std.dev: (600.70, 658.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5007) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (223, 335, 734) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1756) [M::mem_pestat] mean and std.dev: (446.66, 361.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2267) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 699574 sequences (100000102 bp) in 1.400 CPU sec, 1.399 real sec... [M::mem_process_seqs] Processed 694382 reads in 134.813 CPU sec, 4.296 real sec [M::mem_process_seqs] Processed 694454 reads in 85.597 CPU sec, 2.708 real sec sorting block 13, #reads = 1086615 mem = 536879083 peak = 936345600 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (62, 290224, 26, 70) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (172, 294, 529) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1243) [M::mem_pestat] mean and std.dev: (347.11, 242.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1600) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (170, 255, 366) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 758) [M::mem_pestat] mean and std.dev: (278.09, 137.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 954) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (102, 612, 1221) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3459) [M::mem_pestat] mean and std.dev: (657.04, 592.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4578) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (164, 299, 609) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1499) [M::mem_pestat] mean and std.dev: (370.92, 286.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1944) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 700736 sequences (100000270 bp) in 2.415 CPU sec, 2.573 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (56, 291262, 27, 58) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (191, 327, 513) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1157) [M::mem_pestat] mean and std.dev: (321.68, 199.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1479) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (160, 239, 349) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 727) [M::mem_pestat] mean and std.dev: (264.92, 133.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 916) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (441, 672, 1469) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3525) [M::mem_pestat] mean and std.dev: (756.21, 640.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4553) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (206, 279, 500) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1088) [M::mem_pestat] mean and std.dev: (293.92, 157.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1382) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 694224 reads in 135.355 CPU sec, 4.300 real sec [M::process] read 699682 sequences (100000023 bp) in 1.455 CPU sec, 1.466 real sec... sorting block 14, #reads = 1086592 mem = 536877488 peak = 936345600 [M::mem_process_seqs] Processed 699574 reads in 86.265 CPU sec, 2.724 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (51, 291971, 18, 61) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (174, 280, 751) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1905) [M::mem_pestat] mean and std.dev: (419.28, 335.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2482) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (158, 236, 345) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 719) [M::mem_pestat] mean and std.dev: (261.55, 131.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 906) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (38, 511, 1267) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3725) [M::mem_pestat] mean and std.dev: (646.25, 723.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4954) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (207, 270, 450) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 936) [M::mem_pestat] mean and std.dev: (297.55, 137.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1179) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 15, #reads = 1088333 mem = 536886192 peak = 936345600 [M::process] read 698828 sequences (100000172 bp) in 2.667 CPU sec, 2.915 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (58, 292172, 36, 80) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (190, 333, 588) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1384) [M::mem_pestat] mean and std.dev: (433.77, 305.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1782) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (160, 239, 348) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 724) [M::mem_pestat] mean and std.dev: (264.20, 132.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 912) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (417, 713, 1203) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2775) [M::mem_pestat] mean and std.dev: (778.51, 514.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3561) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (235, 324, 707) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1651) [M::mem_pestat] mean and std.dev: (371.57, 251.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2123) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 700736 reads in 135.021 CPU sec, 4.320 real sec [M::mem_process_seqs] Processed 699682 reads in 86.781 CPU sec, 2.748 real sec [M::process] read 697620 sequences (100000164 bp) in 2.033 CPU sec, 2.157 real sec... sorting block 16, #reads = 1091155 mem = 536878690 peak = 936345600 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (60, 291764, 34, 58) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (189, 297, 753) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1881) [M::mem_pestat] mean and std.dev: (390.73, 342.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2445) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (161, 242, 354) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 740) [M::mem_pestat] mean and std.dev: (268.21, 135.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 933) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (162, 481, 1207) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3297) [M::mem_pestat] mean and std.dev: (558.77, 492.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4342) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (180, 245, 438) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 954) [M::mem_pestat] mean and std.dev: (283.35, 172.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1212) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 697160 sequences (100000155 bp) in 2.016 CPU sec, 2.152 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (78, 291579, 25, 55) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (187, 239, 460) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1006) [M::mem_pestat] mean and std.dev: (280.55, 145.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1279) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 247, 362) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 758) [M::mem_pestat] mean and std.dev: (273.69, 138.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 956) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (276, 924, 1708) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4572) [M::mem_pestat] mean and std.dev: (967.29, 834.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6004) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (189, 271, 621) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1485) [M::mem_pestat] mean and std.dev: (381.76, 296.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1917) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 698828 reads in 135.521 CPU sec, 4.320 real sec [M::mem_process_seqs] Processed 697620 reads in 86.138 CPU sec, 2.722 real sec [M::process] read 696546 sequences (100000090 bp) in 1.644 CPU sec, 1.706 real sec... sorting block 17, #reads = 1089967 mem = 536878700 peak = 936345600 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (56, 290868, 40, 86) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (151, 287, 1061) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2881) [M::mem_pestat] mean and std.dev: (618.79, 697.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3791) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 248, 364) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 762) [M::mem_pestat] mean and std.dev: (274.91, 139.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 961) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (178, 836, 1547) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4285) [M::mem_pestat] mean and std.dev: (824.11, 843.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5654) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (181, 361, 536) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1246) [M::mem_pestat] mean and std.dev: (376.94, 255.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1601) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 695872 sequences (100000176 bp) in 2.155 CPU sec, 2.338 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (68, 290542, 28, 76) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (239, 447, 1201) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3125) [M::mem_pestat] mean and std.dev: (695.18, 583.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4087) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 250, 366) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 766) [M::mem_pestat] mean and std.dev: (276.47, 139.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 966) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (385, 1165, 1562) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3916) [M::mem_pestat] mean and std.dev: (1072.70, 938.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5093) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (186, 293, 709) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1755) [M::mem_pestat] mean and std.dev: (361.62, 279.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2278) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 697160 reads in 135.671 CPU sec, 4.341 real sec [M::mem_process_seqs] Processed 696546 reads in 86.445 CPU sec, 2.735 real sec sorting block 18, #reads = 1089971 mem = 536878015 peak = 936345600 [M::process] read 695754 sequences (100000210 bp) in 1.742 CPU sec, 1.797 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (83, 290437, 24, 74) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (221, 345, 694) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1640) [M::mem_pestat] mean and std.dev: (397.71, 267.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2113) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 250, 364) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 758) [M::mem_pestat] mean and std.dev: (275.76, 138.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 955) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (177, 321, 558) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1320) [M::mem_pestat] mean and std.dev: (321.52, 224.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1701) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (203, 365, 955) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2459) [M::mem_pestat] mean and std.dev: (588.52, 585.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3211) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 19, #reads = 1088565 mem = 536878650 peak = 936345600 [M::process] read 695880 sequences (100000287 bp) in 2.244 CPU sec, 2.398 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (72, 290109, 24, 69) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (175, 282, 583) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1399) [M::mem_pestat] mean and std.dev: (339.35, 268.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1807) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 249, 359) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 745) [M::mem_pestat] mean and std.dev: (272.88, 135.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 938) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (226, 520, 881) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2191) [M::mem_pestat] mean and std.dev: (599.17, 460.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2846) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (161, 237, 463) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1067) [M::mem_pestat] mean and std.dev: (322.42, 235.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1369) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 695872 reads in 135.892 CPU sec, 4.328 real sec [M::process] read 694940 sequences (100000177 bp) in 1.471 CPU sec, 1.498 real sec... [M::mem_process_seqs] Processed 695754 reads in 86.344 CPU sec, 2.729 real sec sorting block 20, #reads = 1088396 mem = 536879891 peak = 936345600 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (60, 290166, 21, 85) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (168, 241, 702) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1770) [M::mem_pestat] mean and std.dev: (343.56, 269.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2304) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 250, 360) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 748) [M::mem_pestat] mean and std.dev: (273.66, 135.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 942) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (269, 525, 2434) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6764) [M::mem_pestat] mean and std.dev: (1137.55, 1619.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8929) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (177, 307, 493) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1125) [M::mem_pestat] mean and std.dev: (288.15, 154.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1441) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 694150 sequences (100000236 bp) in 2.091 CPU sec, 2.212 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (70, 290010, 31, 46) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (162, 278, 590) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1446) [M::mem_pestat] mean and std.dev: (335.43, 257.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1874) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (168, 253, 364) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 756) [M::mem_pestat] mean and std.dev: (276.78, 137.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 952) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (340, 625, 981) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2263) [M::mem_pestat] mean and std.dev: (556.74, 394.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2904) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (198, 283, 437) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 915) [M::mem_pestat] mean and std.dev: (311.79, 180.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1154) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 695880 reads in 136.484 CPU sec, 4.359 real sec [M::process] read 699344 sequences (100000171 bp) in 1.460 CPU sec, 1.484 real sec... [M::mem_process_seqs] Processed 694940 reads in 86.408 CPU sec, 2.734 real sec sorting block 21, #reads = 1086179 mem = 536878071 peak = 936345600 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (51, 289755, 25, 93) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (180, 275, 742) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1866) [M::mem_pestat] mean and std.dev: (381.14, 428.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2428) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (170, 255, 366) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 758) [M::mem_pestat] mean and std.dev: (278.21, 137.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 954) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (314, 777, 1080) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2612) [M::mem_pestat] mean and std.dev: (592.24, 345.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3378) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (186, 276, 479) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1065) [M::mem_pestat] mean and std.dev: (329.51, 211.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1358) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 700216 sequences (100000032 bp) in 2.335 CPU sec, 2.492 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (67, 291687, 23, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (156, 295, 473) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1107) [M::mem_pestat] mean and std.dev: (307.15, 216.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1424) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (161, 240, 350) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 728) [M::mem_pestat] mean and std.dev: (265.83, 133.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 917) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (164, 367, 1555) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4337) [M::mem_pestat] mean and std.dev: (722.76, 814.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5728) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (195, 237, 574) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1332) [M::mem_pestat] mean and std.dev: (397.84, 316.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1711) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 694150 reads in 135.831 CPU sec, 4.324 real sec [M::process] read 698986 sequences (100000297 bp) in 1.400 CPU sec, 1.397 real sec... [M::mem_process_seqs] Processed 699344 reads in 86.378 CPU sec, 2.743 real sec sorting block 22, #reads = 1086460 mem = 536879531 peak = 936345600 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (80, 291862, 31, 65) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (164, 244, 410) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 902) [M::mem_pestat] mean and std.dev: (236.08, 116.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1148) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (159, 238, 348) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 726) [M::mem_pestat] mean and std.dev: (264.00, 133.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 915) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (198, 448, 1120) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2964) [M::mem_pestat] mean and std.dev: (656.66, 595.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3886) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (222, 385, 841) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2079) [M::mem_pestat] mean and std.dev: (585.89, 503.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2698) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 698272 sequences (100000211 bp) in 2.054 CPU sec, 2.194 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (67, 291598, 18, 63) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (183, 255, 364) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 726) [M::mem_pestat] mean and std.dev: (264.84, 120.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 907) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (161, 241, 352) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 734) [M::mem_pestat] mean and std.dev: (267.41, 135.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 925) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (216, 1168, 2576) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7296) [M::mem_pestat] mean and std.dev: (1292.50, 1070.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9656) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (209, 319, 523) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1151) [M::mem_pestat] mean and std.dev: (366.60, 234.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1465) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 700216 reads in 134.767 CPU sec, 4.303 real sec [M::process] read 697384 sequences (100000096 bp) in 1.510 CPU sec, 1.516 real sec... sorting block 23, #reads = 1089216 mem = 536881252 peak = 936345600 [M::mem_process_seqs] Processed 698986 reads in 85.515 CPU sec, 2.708 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (58, 291084, 21, 79) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (189, 310, 833) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2121) [M::mem_pestat] mean and std.dev: (605.02, 631.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3132) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (163, 245, 357) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 745) [M::mem_pestat] mean and std.dev: (270.62, 136.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 939) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (134, 375, 1822) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5198) [M::mem_pestat] mean and std.dev: (1057.52, 1306.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6886) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (246, 401, 809) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1935) [M::mem_pestat] mean and std.dev: (442.64, 315.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2498) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 24, #reads = 1090272 mem = 536878518 peak = 970223616 [M::process] read 696974 sequences (100000098 bp) in 2.401 CPU sec, 2.556 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (69, 291334, 28, 69) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (189, 367, 618) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1476) [M::mem_pestat] mean and std.dev: (413.27, 305.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1905) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 247, 360) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 752) [M::mem_pestat] mean and std.dev: (272.91, 137.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 948) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (426, 1200, 2235) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5853) [M::mem_pestat] mean and std.dev: (1227.32, 1164.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7662) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (254, 407, 1490) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3962) [M::mem_pestat] mean and std.dev: (830.30, 805.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5198) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 698272 reads in 134.460 CPU sec, 4.284 real sec [M::process] read 696824 sequences (100000217 bp) in 1.573 CPU sec, 1.604 real sec... [M::mem_process_seqs] Processed 697384 reads in 85.586 CPU sec, 2.702 real sec sorting block 25, #reads = 1089515 mem = 536881036 peak = 970223616 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (71, 291147, 30, 68) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (200, 363, 695) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1685) [M::mem_pestat] mean and std.dev: (456.06, 389.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2180) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 248, 363) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 761) [M::mem_pestat] mean and std.dev: (274.81, 139.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 960) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (381, 583, 805) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1653) [M::mem_pestat] mean and std.dev: (529.68, 267.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2077) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (195, 384, 866) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2208) [M::mem_pestat] mean and std.dev: (588.17, 579.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2908) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 697296 sequences (100000193 bp) in 2.142 CPU sec, 2.314 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (68, 290759, 26, 60) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (153, 366, 745) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1929) [M::mem_pestat] mean and std.dev: (442.26, 405.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2521) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 248, 361) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 753) [M::mem_pestat] mean and std.dev: (274.22, 138.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 949) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (525, 889, 1704) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4062) [M::mem_pestat] mean and std.dev: (1162.69, 934.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5241) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (209, 321, 668) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1586) [M::mem_pestat] mean and std.dev: (375.28, 289.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2045) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 696974 reads in 134.372 CPU sec, 4.293 real sec [M::mem_process_seqs] Processed 696824 reads in 85.973 CPU sec, 2.715 real sec [M::process] read 696930 sequences (100000058 bp) in 1.623 CPU sec, 1.658 real sec... sorting block 26, #reads = 1089337 mem = 536884882 peak = 970223616 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (82, 290646, 24, 71) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (188, 261, 507) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1145) [M::mem_pestat] mean and std.dev: (330.23, 227.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1464) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 245, 358) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 746) [M::mem_pestat] mean and std.dev: (271.50, 137.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 940) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (514, 679, 1139) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2389) [M::mem_pestat] mean and std.dev: (792.57, 478.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3014) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (192, 369, 567) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1317) [M::mem_pestat] mean and std.dev: (392.61, 258.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1692) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 696442 sequences (100000185 bp) in 2.192 CPU sec, 2.381 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (57, 290767, 25, 66) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (208, 279, 579) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1321) [M::mem_pestat] mean and std.dev: (361.21, 273.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1692) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 245, 355) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 737) [M::mem_pestat] mean and std.dev: (270.42, 135.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 928) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (431, 807, 1868) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4742) [M::mem_pestat] mean and std.dev: (959.92, 821.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6179) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (164, 241, 448) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1016) [M::mem_pestat] mean and std.dev: (317.95, 242.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1300) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 697296 reads in 136.204 CPU sec, 4.354 real sec [M::mem_process_seqs] Processed 696930 reads in 86.060 CPU sec, 2.718 real sec [M::process] read 695946 sequences (100000166 bp) in 1.715 CPU sec, 1.766 real sec... sorting block 27, #reads = 1089047 mem = 536880934 peak = 970223616 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (62, 290301, 22, 71) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (194, 314, 778) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1946) [M::mem_pestat] mean and std.dev: (387.89, 294.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2530) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 246, 355) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 735) [M::mem_pestat] mean and std.dev: (270.82, 134.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 925) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (195, 395, 1807) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5031) [M::mem_pestat] mean and std.dev: (1133.10, 1445.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6914) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (213, 333, 428) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 858) [M::mem_pestat] mean and std.dev: (318.02, 144.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1073) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 28, #reads = 1088752 mem = 536883419 peak = 970223616 [M::process] read 695064 sequences (100000142 bp) in 2.143 CPU sec, 2.309 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (55, 290373, 24, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (217, 357, 1089) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2833) [M::mem_pestat] mean and std.dev: (588.74, 563.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3705) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 250, 360) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 748) [M::mem_pestat] mean and std.dev: (273.86, 136.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 942) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (240, 744, 2313) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6459) [M::mem_pestat] mean and std.dev: (1214.57, 1415.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8532) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (172, 289, 457) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1027) [M::mem_pestat] mean and std.dev: (284.19, 148.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1312) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 696442 reads in 135.847 CPU sec, 4.344 real sec [M::mem_process_seqs] Processed 695946 reads in 86.075 CPU sec, 2.721 real sec [M::process] read 700404 sequences (100000025 bp) in 1.798 CPU sec, 1.871 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (67, 290305, 31, 62) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (198, 297, 448) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 948) [M::mem_pestat] mean and std.dev: (295.50, 161.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1198) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (168, 251, 362) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 750) [M::mem_pestat] mean and std.dev: (275.51, 136.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 944) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (288, 1282, 2487) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6885) [M::mem_pestat] mean and std.dev: (1976.87, 2040.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 10138) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (208, 265, 525) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1159) [M::mem_pestat] mean and std.dev: (332.09, 188.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1476) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 29, #reads = 1087673 mem = 536882303 peak = 970223616 [M::process] read 704630 sequences (100000164 bp) in 2.362 CPU sec, 2.490 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (64, 292148, 25, 76) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (190, 302, 510) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1150) [M::mem_pestat] mean and std.dev: (337.89, 229.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1470) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (158, 236, 344) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 716) [M::mem_pestat] mean and std.dev: (261.90, 132.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 902) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (520, 633, 1344) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2992) [M::mem_pestat] mean and std.dev: (892.00, 661.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3816) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (175, 309, 549) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1297) [M::mem_pestat] mean and std.dev: (324.27, 196.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1671) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 695064 reads in 138.641 CPU sec, 4.420 real sec [M::mem_process_seqs] Processed 700404 reads in 90.615 CPU sec, 2.861 real sec [M::process] read 702598 sequences (100000165 bp) in 1.689 CPU sec, 1.739 real sec... sorting block 30, #reads = 1087921 mem = 536877179 peak = 970223616 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (49, 293634, 29, 47) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (169, 327, 668) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1666) [M::mem_pestat] mean and std.dev: (384.73, 300.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2165) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 222, 327) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 677) [M::mem_pestat] mean and std.dev: (250.17, 127.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 852) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (211, 642, 2204) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6190) [M::mem_pestat] mean and std.dev: (1193.29, 1378.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8183) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (161, 199, 415) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 923) [M::mem_pestat] mean and std.dev: (232.82, 154.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1177) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 702528 sequences (100000169 bp) in 2.105 CPU sec, 2.214 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (58, 293403, 25, 62) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (185, 272, 747) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1871) [M::mem_pestat] mean and std.dev: (425.33, 358.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2433) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (155, 229, 337) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 701) [M::mem_pestat] mean and std.dev: (256.95, 131.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 883) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (199, 490, 1154) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3064) [M::mem_pestat] mean and std.dev: (692.84, 630.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4019) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (196, 270, 407) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 829) [M::mem_pestat] mean and std.dev: (270.06, 132.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1040) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 700432 sequences (100000029 bp) in 1.420 CPU sec, 1.422 real sec... [M::mem_process_seqs] Processed 704630 reads in 141.483 CPU sec, 4.509 real sec [M::mem_process_seqs] Processed 702598 reads in 87.529 CPU sec, 2.769 real sec sorting block 31, #reads = 1089057 mem = 536882322 peak = 970223616 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (52, 293228, 23, 59) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (169, 322, 542) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1288) [M::mem_pestat] mean and std.dev: (369.71, 277.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1661) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (155, 228, 336) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 698) [M::mem_pestat] mean and std.dev: (255.86, 130.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 879) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (210, 355, 829) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2067) [M::mem_pestat] mean and std.dev: (464.05, 313.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2686) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (200, 306, 505) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1115) [M::mem_pestat] mean and std.dev: (350.00, 228.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1420) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 699886 sequences (100000218 bp) in 2.511 CPU sec, 2.671 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (68, 292478, 23, 63) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (201, 356, 840) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2118) [M::mem_pestat] mean and std.dev: (526.66, 478.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2757) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (158, 235, 348) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 728) [M::mem_pestat] mean and std.dev: (264.13, 135.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 918) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (357, 709, 1333) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3285) [M::mem_pestat] mean and std.dev: (895.87, 658.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4261) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (230, 294, 650) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1490) [M::mem_pestat] mean and std.dev: (423.97, 278.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1910) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 702528 reads in 140.208 CPU sec, 4.459 real sec [M::process] read 699728 sequences (100000202 bp) in 1.511 CPU sec, 1.521 real sec... sorting block 32, #reads = 1091038 mem = 536885968 peak = 970223616 [M::mem_process_seqs] Processed 700432 reads in 87.851 CPU sec, 2.777 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (65, 292109, 25, 64) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (153, 270, 590) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1464) [M::mem_pestat] mean and std.dev: (359.51, 302.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1901) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (159, 238, 351) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 735) [M::mem_pestat] mean and std.dev: (266.32, 136.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 927) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (346, 579, 892) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1984) [M::mem_pestat] mean and std.dev: (567.26, 362.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2530) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (203, 326, 811) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2027) [M::mem_pestat] mean and std.dev: (429.02, 381.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2635) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 33, #reads = 1091262 mem = 536880555 peak = 1033736192 [M::process] read 698306 sequences (100000235 bp) in 2.090 CPU sec, 2.249 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (62, 292013, 33, 69) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (180, 329, 763) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1929) [M::mem_pestat] mean and std.dev: (532.92, 539.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2689) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (159, 235, 346) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 720) [M::mem_pestat] mean and std.dev: (263.48, 134.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 907) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (319, 1055, 1324) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3334) [M::mem_pestat] mean and std.dev: (822.90, 531.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4339) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (169, 276, 529) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1249) [M::mem_pestat] mean and std.dev: (353.63, 249.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1609) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 696736 sequences (100000285 bp) in 1.450 CPU sec, 1.447 real sec... [M::mem_process_seqs] Processed 699886 reads in 141.914 CPU sec, 4.526 real sec [M::mem_process_seqs] Processed 699728 reads in 89.948 CPU sec, 2.847 real sec sorting block 34, #reads = 1088077 mem = 536876876 peak = 1033736192 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (68, 291794, 36, 57) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (199, 298, 664) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1594) [M::mem_pestat] mean and std.dev: (382.25, 321.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2059) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (162, 242, 357) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 747) [M::mem_pestat] mean and std.dev: (270.54, 138.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 942) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (157, 374, 1053) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2845) [M::mem_pestat] mean and std.dev: (572.94, 518.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3741) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (227, 316, 570) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1256) [M::mem_pestat] mean and std.dev: (360.14, 223.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1599) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 695672 sequences (100000059 bp) in 2.447 CPU sec, 2.614 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (72, 290988, 24, 80) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (160, 284, 547) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1321) [M::mem_pestat] mean and std.dev: (338.30, 263.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1708) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 248, 363) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 759) [M::mem_pestat] mean and std.dev: (274.18, 138.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 957) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (135, 724, 1412) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3966) [M::mem_pestat] mean and std.dev: (909.21, 921.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5243) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (178, 254, 593) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1423) [M::mem_pestat] mean and std.dev: (365.78, 296.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1838) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 695258 sequences (100000128 bp) in 1.449 CPU sec, 1.447 real sec... [M::mem_process_seqs] Processed 698306 reads in 142.752 CPU sec, 4.537 real sec [M::mem_process_seqs] Processed 696736 reads in 89.630 CPU sec, 2.837 real sec sorting block 35, #reads = 1087490 mem = 536880017 peak = 1033736192 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (77, 290456, 41, 60) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (211, 307, 473) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 997) [M::mem_pestat] mean and std.dev: (317.58, 151.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1259) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 251, 366) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 764) [M::mem_pestat] mean and std.dev: (277.11, 139.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 963) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (221, 1280, 2487) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7019) [M::mem_pestat] mean and std.dev: (1490.44, 1507.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9285) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (222, 367, 638) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1470) [M::mem_pestat] mean and std.dev: (416.33, 283.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1886) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 701746 sequences (100000218 bp) in 2.620 CPU sec, 2.771 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (78, 290339, 22, 72) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (141, 292, 551) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1371) [M::mem_pestat] mean and std.dev: (326.80, 287.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1781) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (168, 252, 367) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 765) [M::mem_pestat] mean and std.dev: (278.13, 139.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 964) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (304, 621, 1992) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5368) [M::mem_pestat] mean and std.dev: (767.05, 822.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7056) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (194, 333, 1150) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3062) [M::mem_pestat] mean and std.dev: (694.65, 690.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4018) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 695672 reads in 142.730 CPU sec, 4.554 real sec [M::mem_process_seqs] Processed 695258 reads in 91.433 CPU sec, 2.888 real sec sorting block 36, #reads = 1084995 mem = 536878249 peak = 1033736192 [M::process] read 707752 sequences (100000124 bp) in 2.288 CPU sec, 2.402 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (62, 292465, 38, 67) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (159, 238, 395) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 867) [M::mem_pestat] mean and std.dev: (278.12, 163.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1103) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (156, 231, 340) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 708) [M::mem_pestat] mean and std.dev: (258.93, 131.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 892) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (192, 629, 799) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2013) [M::mem_pestat] mean and std.dev: (593.22, 494.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2620) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (204, 333, 558) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1266) [M::mem_pestat] mean and std.dev: (366.40, 225.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1620) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 37, #reads = 1083986 mem = 536886561 peak = 1033736192 [M::process] read 704604 sequences (100000036 bp) in 2.491 CPU sec, 2.615 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (57, 294926, 23, 62) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (137, 243, 395) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 911) [M::mem_pestat] mean and std.dev: (269.10, 190.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1169) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (148, 215, 314) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 646) [M::mem_pestat] mean and std.dev: (240.92, 120.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 812) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (238, 683, 1008) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2548) [M::mem_pestat] mean and std.dev: (629.14, 397.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3318) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (192, 296, 445) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 951) [M::mem_pestat] mean and std.dev: (298.85, 156.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1204) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 701746 reads in 153.486 CPU sec, 4.892 real sec [M::mem_process_seqs] Processed 707752 reads in 98.974 CPU sec, 3.126 real sec [M::process] read 701842 sequences (100000280 bp) in 2.009 CPU sec, 2.068 real sec... sorting block 38, #reads = 1087118 mem = 536878228 peak = 1033736192 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (55, 293889, 23, 47) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (214, 300, 561) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1255) [M::mem_pestat] mean and std.dev: (379.37, 265.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1602) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 224, 328) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 680) [M::mem_pestat] mean and std.dev: (250.39, 126.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 856) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (269, 479, 835) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1967) [M::mem_pestat] mean and std.dev: (509.33, 413.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2533) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (185, 260, 1110) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2960) [M::mem_pestat] mean and std.dev: (506.02, 499.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3885) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 701174 sequences (100000149 bp) in 2.518 CPU sec, 2.655 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (58, 293401, 23, 72) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (175, 252, 351) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 703) [M::mem_pestat] mean and std.dev: (253.85, 108.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 879) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (156, 231, 339) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 705) [M::mem_pestat] mean and std.dev: (257.91, 130.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 888) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (297, 653, 1114) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2748) [M::mem_pestat] mean and std.dev: (665.86, 593.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3565) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (202, 495, 826) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2074) [M::mem_pestat] mean and std.dev: (564.29, 430.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2698) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 704604 reads in 148.546 CPU sec, 4.748 real sec [M::mem_process_seqs] Processed 701842 reads in 94.410 CPU sec, 2.987 real sec [M::process] read 700084 sequences (100000216 bp) in 2.234 CPU sec, 2.348 real sec... sorting block 39, #reads = 1087313 mem = 536882506 peak = 1033736192 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (68, 292586, 34, 57) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (195, 346, 689) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1677) [M::mem_pestat] mean and std.dev: (446.27, 387.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2171) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (157, 234, 344) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 718) [M::mem_pestat] mean and std.dev: (261.66, 133.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 905) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (124, 417, 1485) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4207) [M::mem_pestat] mean and std.dev: (693.29, 768.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5568) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (201, 279, 660) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1578) [M::mem_pestat] mean and std.dev: (399.51, 307.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2037) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 699126 sequences (100000062 bp) in 2.548 CPU sec, 2.684 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (69, 292551, 27, 60) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (175, 306, 792) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2026) [M::mem_pestat] mean and std.dev: (393.40, 353.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2643) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (159, 237, 348) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 726) [M::mem_pestat] mean and std.dev: (264.38, 134.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 915) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (131, 559, 1101) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3041) [M::mem_pestat] mean and std.dev: (639.16, 668.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4011) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (185, 300, 881) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2273) [M::mem_pestat] mean and std.dev: (564.59, 545.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2969) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 701174 reads in 149.225 CPU sec, 4.759 real sec [M::mem_process_seqs] Processed 700084 reads in 93.788 CPU sec, 2.965 real sec sorting block 40, #reads = 1086887 mem = 536878453 peak = 1033736192 [M::process] read 698312 sequences (100000233 bp) in 2.134 CPU sec, 2.233 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (52, 291790, 21, 67) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (203, 273, 525) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1169) [M::mem_pestat] mean and std.dev: (345.42, 214.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1491) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (160, 239, 353) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 739) [M::mem_pestat] mean and std.dev: (267.33, 135.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 932) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (190, 392, 1435) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3925) [M::mem_pestat] mean and std.dev: (754.50, 864.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5170) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (215, 313, 561) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1253) [M::mem_pestat] mean and std.dev: (329.26, 181.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1599) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 41, #reads = 1084917 mem = 536878467 peak = 1033736192 [M::process] read 696784 sequences (100000188 bp) in 2.341 CPU sec, 2.469 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (70, 291810, 28, 58) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (190, 288, 985) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2575) [M::mem_pestat] mean and std.dev: (581.75, 607.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3370) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (162, 242, 356) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 744) [M::mem_pestat] mean and std.dev: (269.80, 137.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 938) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (593, 844, 2646) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6752) [M::mem_pestat] mean and std.dev: (1177.42, 1047.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8805) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (176, 301, 665) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1643) [M::mem_pestat] mean and std.dev: (436.67, 357.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2132) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 699126 reads in 143.650 CPU sec, 4.596 real sec [M::mem_process_seqs] Processed 698312 reads in 90.559 CPU sec, 2.866 real sec [M::process] read 696404 sequences (100000235 bp) in 2.286 CPU sec, 2.401 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (70, 290465, 35, 99) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (211, 387, 950) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2428) [M::mem_pestat] mean and std.dev: (649.42, 567.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3167) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 248, 365) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 765) [M::mem_pestat] mean and std.dev: (275.67, 140.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 965) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (297, 713, 1450) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3756) [M::mem_pestat] mean and std.dev: (758.21, 625.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4909) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (195, 334, 941) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2433) [M::mem_pestat] mean and std.dev: (509.82, 502.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3179) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 42, #reads = 1086404 mem = 536881127 peak = 1033736192 [M::process] read 696710 sequences (100000201 bp) in 2.500 CPU sec, 2.618 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (60, 290821, 38, 87) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (199, 359, 558) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1276) [M::mem_pestat] mean and std.dev: (358.08, 240.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1635) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 247, 362) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 756) [M::mem_pestat] mean and std.dev: (274.68, 139.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 953) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (190, 389, 1365) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3715) [M::mem_pestat] mean and std.dev: (808.25, 959.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4890) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (182, 283, 395) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 821) [M::mem_pestat] mean and std.dev: (280.03, 133.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1034) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 696784 reads in 142.348 CPU sec, 4.550 real sec [M::mem_process_seqs] Processed 696404 reads in 90.960 CPU sec, 2.880 real sec [M::process] read 705476 sequences (100000072 bp) in 2.409 CPU sec, 2.559 real sec... sorting block 43, #reads = 1085566 mem = 536879341 peak = 1033736192 [M::process] read 702850 sequences (100000062 bp) in 2.325 CPU sec, 2.447 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (39, 293831, 25, 68) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (190, 305, 463) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1009) [M::mem_pestat] mean and std.dev: (319.20, 178.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1282) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (151, 221, 324) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 670) [M::mem_pestat] mean and std.dev: (247.48, 124.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 843) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (184, 921, 2277) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6463) [M::mem_pestat] mean and std.dev: (1161.04, 1348.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8556) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (186, 340, 607) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1449) [M::mem_pestat] mean and std.dev: (399.62, 286.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1870) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 705476 reads in 80.292 CPU sec, 2.534 real sec sorting block 44, #reads = 1087094 mem = 536877697 peak = 1033736192 [M::process] read 701180 sequences (100000004 bp) in 2.204 CPU sec, 2.315 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (59, 290292, 33, 57) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (169, 238, 380) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 802) [M::mem_pestat] mean and std.dev: (269.59, 160.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1013) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 244, 358) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 746) [M::mem_pestat] mean and std.dev: (272.36, 138.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 940) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (151, 550, 1053) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2857) [M::mem_pestat] mean and std.dev: (607.06, 506.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3759) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (258, 367, 536) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1092) [M::mem_pestat] mean and std.dev: (370.96, 166.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1370) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (79, 292865, 23, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (210, 296, 927) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2361) [M::mem_pestat] mean and std.dev: (432.47, 382.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3078) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (155, 228, 334) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 692) [M::mem_pestat] mean and std.dev: (255.15, 129.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 871) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (256, 535, 1222) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3154) [M::mem_pestat] mean and std.dev: (581.82, 446.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4120) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (196, 254, 536) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1216) [M::mem_pestat] mean and std.dev: (311.04, 200.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1556) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 696710 reads in 227.418 CPU sec, 7.240 real sec [M::mem_process_seqs] Processed 702850 reads in 103.517 CPU sec, 3.277 real sec [M::process] read 700158 sequences (100000164 bp) in 2.435 CPU sec, 2.553 real sec... sorting block 45, #reads = 1084146 mem = 536880150 peak = 1033736192 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (43, 292789, 23, 58) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (163, 245, 407) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 895) [M::mem_pestat] mean and std.dev: (230.89, 119.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1139) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (157, 233, 343) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 715) [M::mem_pestat] mean and std.dev: (260.33, 132.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 901) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (249, 644, 1057) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2673) [M::mem_pestat] mean and std.dev: (664.05, 599.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3481) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (213, 338, 786) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1932) [M::mem_pestat] mean and std.dev: (463.85, 369.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2505) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 699426 sequences (100000129 bp) in 2.446 CPU sec, 2.582 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (76, 292507, 24, 73) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (211, 354, 536) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1186) [M::mem_pestat] mean and std.dev: (345.70, 221.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1511) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (159, 237, 350) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 732) [M::mem_pestat] mean and std.dev: (264.94, 135.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 923) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (310, 779, 1586) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4138) [M::mem_pestat] mean and std.dev: (788.09, 703.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5414) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (191, 317, 415) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 863) [M::mem_pestat] mean and std.dev: (287.52, 147.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1087) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 701180 reads in 137.553 CPU sec, 4.401 real sec [M::mem_process_seqs] Processed 700158 reads in 87.391 CPU sec, 2.772 real sec sorting block 46, #reads = 1090333 mem = 536884719 peak = 1033736192 [M::process] read 698956 sequences (100000147 bp) in 2.414 CPU sec, 2.562 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (75, 292071, 15, 61) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (184, 283, 687) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1693) [M::mem_pestat] mean and std.dev: (406.70, 359.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2196) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (160, 239, 353) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 739) [M::mem_pestat] mean and std.dev: (267.04, 135.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 932) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (339, 539, 761) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1605) [M::mem_pestat] mean and std.dev: (516.43, 332.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2027) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (153, 255, 456) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1062) [M::mem_pestat] mean and std.dev: (282.87, 175.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1365) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (54, 292204, 16, 61) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (132, 223, 470) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1146) [M::mem_pestat] mean and std.dev: (283.71, 199.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1484) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (161, 240, 355) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 743) [M::mem_pestat] mean and std.dev: (268.71, 137.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 937) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (220, 464, 960) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2440) [M::mem_pestat] mean and std.dev: (443.60, 332.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3180) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (190, 287, 575) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1345) [M::mem_pestat] mean and std.dev: (293.14, 171.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1730) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 698260 sequences (100000110 bp) in 2.319 CPU sec, 2.428 real sec... [M::mem_process_seqs] Processed 699426 reads in 138.119 CPU sec, 4.420 real sec [M::mem_process_seqs] Processed 698956 reads in 87.312 CPU sec, 2.763 real sec sorting block 47, #reads = 1090087 mem = 536883563 peak = 1033736192 [M::process] read 697620 sequences (100000004 bp) in 2.354 CPU sec, 2.463 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (67, 291088, 24, 60) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (171, 271, 358) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 732) [M::mem_pestat] mean and std.dev: (255.02, 122.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 919) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (162, 242, 357) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 747) [M::mem_pestat] mean and std.dev: (270.45, 138.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 942) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (169, 462, 912) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2398) [M::mem_pestat] mean and std.dev: (584.42, 533.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3141) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (174, 306, 676) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1680) [M::mem_pestat] mean and std.dev: (416.04, 384.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2182) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 48, #reads = 1088445 mem = 536879940 peak = 1033736192 [M::process] read 697640 sequences (100000300 bp) in 2.153 CPU sec, 2.229 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (71, 291370, 23, 78) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (196, 283, 650) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1558) [M::mem_pestat] mean and std.dev: (314.43, 213.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2012) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (163, 244, 357) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 745) [M::mem_pestat] mean and std.dev: (270.73, 136.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 939) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (116, 474, 1438) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4082) [M::mem_pestat] mean and std.dev: (585.05, 552.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5404) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (213, 287, 516) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1122) [M::mem_pestat] mean and std.dev: (318.38, 172.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1425) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 698260 reads in 139.450 CPU sec, 4.461 real sec [M::mem_process_seqs] Processed 697620 reads in 89.941 CPU sec, 2.845 real sec [M::process] read 697418 sequences (100000012 bp) in 2.295 CPU sec, 2.443 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (81, 290970, 31, 78) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (192, 340, 729) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1803) [M::mem_pestat] mean and std.dev: (400.04, 304.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2340) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (163, 244, 356) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 742) [M::mem_pestat] mean and std.dev: (270.50, 136.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 935) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (294, 673, 1336) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3420) [M::mem_pestat] mean and std.dev: (843.90, 693.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4462) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (211, 295, 455) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 943) [M::mem_pestat] mean and std.dev: (326.76, 180.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1187) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 49, #reads = 1086075 mem = 536884495 peak = 1033736192 [M::process] read 697136 sequences (100000079 bp) in 2.463 CPU sec, 2.594 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (58, 291107, 36, 74) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (181, 231, 364) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 730) [M::mem_pestat] mean and std.dev: (250.02, 123.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 913) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (163, 243, 356) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 742) [M::mem_pestat] mean and std.dev: (270.28, 136.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 935) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (339, 780, 1223) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2991) [M::mem_pestat] mean and std.dev: (812.26, 686.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3875) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (192, 348, 581) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1359) [M::mem_pestat] mean and std.dev: (351.24, 239.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1748) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 697640 reads in 143.839 CPU sec, 4.604 real sec [M::mem_process_seqs] Processed 697418 reads in 92.268 CPU sec, 2.922 real sec sorting block 50, #reads = 1085319 mem = 536879193 peak = 1033736192 [M::process] read 707092 sequences (100000005 bp) in 2.327 CPU sec, 2.436 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (80, 290559, 24, 88) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (205, 314, 909) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2317) [M::mem_pestat] mean and std.dev: (431.59, 414.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3021) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 244, 356) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 740) [M::mem_pestat] mean and std.dev: (270.46, 136.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 932) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (222, 694, 1983) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5505) [M::mem_pestat] mean and std.dev: (904.50, 1034.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7266) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (230, 359, 673) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1559) [M::mem_pestat] mean and std.dev: (455.45, 350.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2002) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 707414 sequences (100000204 bp) in 2.291 CPU sec, 2.381 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (58, 294265, 30, 56) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (165, 313, 615) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1515) [M::mem_pestat] mean and std.dev: (367.69, 310.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1965) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (149, 218, 318) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 656) [M::mem_pestat] mean and std.dev: (243.80, 123.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 825) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (144, 749, 1560) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4392) [M::mem_pestat] mean and std.dev: (969.90, 884.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5808) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (164, 283, 388) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 836) [M::mem_pestat] mean and std.dev: (292.46, 170.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1060) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 697136 reads in 153.458 CPU sec, 4.892 real sec sorting block 51, #reads = 1084566 mem = 536879974 peak = 1033736192 [M::process] read 704182 sequences (100000163 bp) in 2.065 CPU sec, 2.136 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (58, 294590, 14, 76) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (166, 315, 587) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1429) [M::mem_pestat] mean and std.dev: (383.00, 288.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1850) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (148, 216, 315) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 649) [M::mem_pestat] mean and std.dev: (241.75, 120.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 816) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (266, 781, 2176) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5996) [M::mem_pestat] mean and std.dev: (696.55, 629.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7906) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (207, 560, 1239) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3303) [M::mem_pestat] mean and std.dev: (797.12, 801.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4335) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 701968 sequences (100000151 bp) in 1.492 CPU sec, 1.500 real sec... [M::mem_process_seqs] Processed 707414 reads in 84.775 CPU sec, 2.684 real sec sorting block 52, #reads = 1082623 mem = 536879244 peak = 1033736192 [M::mem_process_seqs] Processed 707092 reads in 206.484 CPU sec, 6.542 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (55, 293723, 18, 55) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (191, 296, 672) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1634) [M::mem_pestat] mean and std.dev: (400.69, 358.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2115) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (153, 225, 331) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 687) [M::mem_pestat] mean and std.dev: (252.22, 127.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 865) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (107, 527, 861) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2369) [M::mem_pestat] mean and std.dev: (504.06, 415.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3123) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (183, 226, 408) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 858) [M::mem_pestat] mean and std.dev: (262.57, 154.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1083) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 700944 sequences (100000266 bp) in 2.735 CPU sec, 2.871 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (73, 293229, 25, 69) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (152, 228, 755) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1961) [M::mem_pestat] mean and std.dev: (289.77, 269.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2564) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (156, 232, 341) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 711) [M::mem_pestat] mean and std.dev: (259.10, 131.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 896) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (86, 138, 748) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2072) [M::mem_pestat] mean and std.dev: (385.46, 422.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2734) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (176, 245, 816) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2096) [M::mem_pestat] mean and std.dev: (505.55, 511.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2736) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 704182 reads in 157.622 CPU sec, 5.009 real sec [M::mem_process_seqs] Processed 701968 reads in 91.367 CPU sec, 2.886 real sec sorting block 53, #reads = 1083956 mem = 536876406 peak = 1033736192 [M::process] read 700122 sequences (100000221 bp) in 2.021 CPU sec, 2.131 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (71, 292772, 18, 80) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (182, 272, 534) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1238) [M::mem_pestat] mean and std.dev: (325.10, 222.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1590) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (158, 235, 347) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 725) [M::mem_pestat] mean and std.dev: (263.45, 134.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 914) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (345, 806, 1959) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5187) [M::mem_pestat] mean and std.dev: (1279.41, 1125.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6801) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (222, 379, 432) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 852) [M::mem_pestat] mean and std.dev: (353.58, 175.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1062) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 54, #reads = 1085311 mem = 536884990 peak = 1075724288 [M::process] read 699178 sequences (100000166 bp) in 2.257 CPU sec, 2.368 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (83, 292228, 25, 72) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (182, 260, 439) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 953) [M::mem_pestat] mean and std.dev: (308.08, 190.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1210) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (159, 237, 350) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 732) [M::mem_pestat] mean and std.dev: (265.62, 135.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 923) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (108, 437, 897) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2475) [M::mem_pestat] mean and std.dev: (558.08, 550.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3264) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (196, 325, 485) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1063) [M::mem_pestat] mean and std.dev: (319.15, 195.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1352) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 700944 reads in 141.507 CPU sec, 4.502 real sec [M::mem_process_seqs] Processed 700122 reads in 90.420 CPU sec, 2.851 real sec [M::process] read 698734 sequences (100000252 bp) in 1.702 CPU sec, 1.730 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (53, 292142, 28, 72) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (169, 264, 800) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2062) [M::mem_pestat] mean and std.dev: (476.12, 541.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2693) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (161, 239, 350) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 728) [M::mem_pestat] mean and std.dev: (266.18, 135.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 917) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (184, 365, 1206) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3250) [M::mem_pestat] mean and std.dev: (446.78, 383.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4272) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (211, 330, 629) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1465) [M::mem_pestat] mean and std.dev: (372.67, 273.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1883) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 55, #reads = 1086830 mem = 536880197 peak = 1075724288 [M::process] read 697808 sequences (100000264 bp) in 2.407 CPU sec, 2.557 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (86, 291305, 26, 44) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (156, 315, 465) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1083) [M::mem_pestat] mean and std.dev: (300.99, 198.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1392) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (161, 239, 350) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 728) [M::mem_pestat] mean and std.dev: (266.38, 135.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 917) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (376, 1020, 2177) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5779) [M::mem_pestat] mean and std.dev: (1506.15, 1588.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7859) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (221, 312, 516) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1106) [M::mem_pestat] mean and std.dev: (343.13, 198.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1401) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 699178 reads in 138.216 CPU sec, 4.414 real sec [M::mem_process_seqs] Processed 698734 reads in 89.008 CPU sec, 2.812 real sec [M::process] read 696968 sequences (100000035 bp) in 1.908 CPU sec, 1.980 real sec... sorting block 56, #reads = 1085955 mem = 536878586 peak = 1075724288 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (60, 291138, 20, 62) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (181, 312, 681) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1681) [M::mem_pestat] mean and std.dev: (477.31, 422.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2181) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (163, 242, 355) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 739) [M::mem_pestat] mean and std.dev: (269.44, 136.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 931) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (124, 362, 1982) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5698) [M::mem_pestat] mean and std.dev: (824.74, 998.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7556) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (201, 330, 705) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1713) [M::mem_pestat] mean and std.dev: (392.21, 256.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2217) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 584782 sequences (83875725 bp) in 2.163 CPU sec, 2.290 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (63, 290943, 34, 77) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (180, 280, 827) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2121) [M::mem_pestat] mean and std.dev: (447.54, 420.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2768) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 245, 359) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 749) [M::mem_pestat] mean and std.dev: (272.09, 138.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 944) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (131, 368, 923) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2507) [M::mem_pestat] mean and std.dev: (462.76, 496.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3299) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (207, 342, 529) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1173) [M::mem_pestat] mean and std.dev: (334.63, 181.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1495) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 697808 reads in 132.499 CPU sec, 4.261 real sec [M::mem_process_seqs] Processed 696968 reads in 83.898 CPU sec, 2.697 real sec sorting block 57, #reads = 1086330 mem = 536878196 peak = 1113403392 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (50, 244052, 17, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (154, 221, 357) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 763) [M::mem_pestat] mean and std.dev: (232.55, 107.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 966) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 244, 358) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 746) [M::mem_pestat] mean and std.dev: (271.89, 138.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 940) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (4, 256, 1166) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3490) [M::mem_pestat] mean and std.dev: (523.82, 645.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4652) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (224, 345, 1440) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3872) [M::mem_pestat] mean and std.dev: (726.52, 748.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5088) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 584782 reads in 62.821 CPU sec, 2.103 real sec sorting block 58, #reads = 1086436 mem = 536882241 peak = 1217142784 os version: Linux 6.12.88 cpu vendor: GenuineIntel signature: 000a06d1 features: 1f8bfbff fffab20b extended: f1bf27eb 1b407f7e amd bits: 2c100800 00000121 brand: Intel(R) Xeon(R) 6975P-C threads: 31 algo: bwa-mem license: sentieon:klib=31 reads: 64154908 overall: 69994541056 mem 8331.518 user 434.994 sys 838.758 real [main] Version: 0.7.17-r1188 [main] CMD: /opt/conda/share/sentieon-202308.03-3/libexec/bwa mem -K 100000000 -Y -R @RG\tID:A23MHWWLT4.1136_27F-T1-TDNA-1_A23MHWWLT4_1.L003\tPU:L003\tSM:1136_27F-T1-TDNA-1_A23MHWWLT4_1\tLB:1136_27F-T1-TDNA-1_A23MHWWLT4_1\tDS:s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta\tPL:ILLUMINA -t 31 ./BWAIndex/Homo_sapiens_assembly38.fasta.64 0003.1136_27F-T1-TDNA-1_A23MHWWLT4_1_R1.fastq.gz 0003.1136_27F-T1-TDNA-1_A23MHWWLT4_1_R2.fastq.gz [main] Real time: 838.793 sec; CPU: 8766.516 sec sorting block 59, #reads = 514560 mem = 254558086 peak = 1217142784 uniq header count 1 merging 60 blocks sw version: sentieon-genomics-202308.03 os version: Linux 6.12.88 cpu vendor: GenuineIntel signature: 000a06d1 features: 1f8bfbff fffab20b extended: f1bf27eb 1b407f7e amd bits: 2c100800 00000121 brand: Intel(R) Xeon(R) 6975P-C threads: 31 max 192 algo: util-sort license: sentieon:util=1 output file size: 3629696332 output reads: 64696172 bam_mem_sort: 60 calls 22.439 user 0.238 sys 22.801 real bam_write: 60 calls 19.952 user 0.756 sys 20.841 real execute: 1 calls 12.199 user 0.529 sys 858.132 real merge_files: 1 calls 12.188 user 0.500 sys 18.608 real parse_chunk: 952 calls 32.000 user 8.763 sys 41.740 real read_chunk: 2573 calls 27.208 user 23.705 sys 230.393 real sort_block: 1 calls 21.880 user 23.190 sys 222.775 real write_chunk: 1619 calls 11.776 user 0.357 sys 17.842 real overall: 2794487808 mem 723.215 user 41.437 sys 858.153 real ls: cannot access '*.cram': No such file or directory