cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i FFPE_HD789_01_p2_gDNA_01_A23MHWWLT4_1.md.bam --algo HsMetricAlgo --targets_list targets/xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_AND_foresight_clarity.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed FFPE_HD789_01_p2_gDNA_01_A23MHWWLT4_1_xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_AND_foresight_clarity.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:181000001, elapsed 4.9s, est remaining 93.3s, peak mem 3680MB, user 107.5s, sys 2.4s, output queue size 146
progress 10% @chr2:91000001, elapsed 9.1s, est remaining 82.3s, peak mem 5324MB, user 238.7s, sys 4.8s, output queue size 166
progress 15% @chr3:11000001, elapsed 13.3s, est remaining 75.6s, peak mem 8204MB, user 353.9s, sys 6.4s, output queue size 220
progress 20% @chr3:158000001, elapsed 16.8s, est remaining 67.1s, peak mem 9649MB, user 470.9s, sys 8.2s, output queue size 364
progress 25% @chr4:133000001, elapsed 19.8s, est remaining 59.5s, peak mem 9775MB, user 573.7s, sys 10.9s, output queue size 302
progress 30% @chr5:102000001, elapsed 22.1s, est remaining 51.6s, peak mem 9775MB, user 633.0s, sys 11.3s, output queue size 464
progress 35% @chr6:91000001, elapsed 25.9s, est remaining 48.1s, peak mem 9928MB, user 737.7s, sys 12.2s, output queue size 625
progress 40% @chr7:66000001, elapsed 30.3s, est remaining 45.5s, peak mem 10269MB, user 860.4s, sys 13.3s, output queue size 786
progress 45% @chr8:78000001, elapsed 35.4s, est remaining 43.3s, peak mem 10746MB, user 1021.7s, sys 14.5s, output queue size 204
progress 50% @chr9:102000001, elapsed 39.7s, est remaining 39.7s, peak mem 11583MB, user 1135.1s, sys 15.5s, output queue size 366
progress 55% @chr10:117000001, elapsed 44.5s, est remaining 36.4s, peak mem 11816MB, user 1291.6s, sys 16.6s, output queue size 348
progress 60% @chr11:130000001, elapsed 49.9s, est remaining 33.3s, peak mem 11816MB, user 1444.8s, sys 17.3s, output queue size 510
progress 65% @chr13:35000001, elapsed 54.7s, est remaining 29.4s, peak mem 11879MB, user 1592.9s, sys 18.4s, output queue size 672
progress 70% @chr14:85000001, elapsed 57.3s, est remaining 24.6s, peak mem 11879MB, user 1697.2s, sys 19.0s, output queue size 635
progress 75% @chr16:42000001, elapsed 62.7s, est remaining 20.9s, peak mem 12114MB, user 1858.8s, sys 20.0s, output queue size 461
progress 80% @chr18:28000001, elapsed 71.7s, est remaining 17.9s, peak mem 12326MB, user 2077.4s, sys 21.1s, output queue size 623
progress 85% @chr20:23000001, elapsed 80.1s, est remaining 14.1s, peak mem 12463MB, user 2361.0s, sys 22.6s, output queue size 785
progress 90% @chr22:39000001, elapsed 84.5s, est remaining 9.4s, peak mem 12481MB, user 2534.4s, sys 23.6s, output queue size 513
progress 95% @chrY:55000001, elapsed 87.2s, est remaining 4.6s, peak mem 12530MB, user 2606.6s, sys 24.0s, output queue size 675
progress 100% @chr22:23000001, elapsed 96.9s, est remaining 0.0s, peak mem 12551MB, user 2742.3s, sys 24.8s, output queue size 3635
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
signature: 000a06d1
features: 1f8bfbff fffab20b
extended: f1bf27eb 1b407f7e
amd bits: 2c100800 00000121
brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 192
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 68397013038
reads: 1261745363
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1057.858 user 21.491 sys 1080.055 real
done: 1 calls 0.279 user 0.039 sys 0.320 real
exec_no_coor: 1 calls 0.008 user 0.000 sys 0.012 real
execute: 1 calls 0.001 user 0.001 sys 96.925 real
idle: 299 calls 0.177 user 0.001 sys 276.712 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 13161250816 mem 2744.289 user 25.296 sys 98.957 real