Detecting adapter sequence for read1...
>Illumina TruSeq Adapter Read 1
AGATCGGAAGAGCACACGTCTGAACTCCAGTCA
Detecting adapter sequence for read2...
>Illumina TruSeq Adapter Read 2
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT
Read1 before filtering:
total reads: 80231758
total bases: 12114995458
Q20 bases: 11767121649(97.1286%)
Q30 bases: 11108133220(91.6891%)
Q40 bases: 11108133220(91.6891%)
Read2 before filtering:
total reads: 80231758
total bases: 12114995458
Q20 bases: 11456776846(94.5669%)
Q30 bases: 10383936261(85.7114%)
Q40 bases: 10383936261(85.7114%)
Read1 after filtering:
total reads: 78420247
total bases: 11480649040
Q20 bases: 11208153662(97.6265%)
Q30 bases: 10627995454(92.5731%)
Q40 bases: 10627995454(92.5731%)
Read2 after filtering:
total reads: 78420247
total bases: 11481516348
Q20 bases: 10980297160(95.6346%)
Q30 bases: 10038791188(87.4344%)
Q40 bases: 10038791188(87.4344%)
Filtering result:
reads passed filter: 156840494
reads failed due to low quality: 3612130
reads failed due to too many N: 8470
reads failed due to too short: 2422
reads with adapter trimmed: 19778436
bases trimmed due to adapters: 723653116
Duplication rate: 11.2927%
Insert size peak (evaluated by paired-end reads): 261
JSON report: 1029_FZX-T1-TDNA-1_A23MHWWLT4_1.fastp.json
HTML report: 1029_FZX-T1-TDNA-1_A23MHWWLT4_1.fastp.html
fastp --in1 1029_FZX-T1-TDNA-1_A23MHWWLT4_1_S36_L004_R1_001.fastq.gz --in2 1029_FZX-T1-TDNA-1_A23MHWWLT4_1_S36_L004_R2_001.fastq.gz --out1 1029_FZX-T1-TDNA-1_A23MHWWLT4_1/1029_FZX-T1-TDNA-1_A23MHWWLT4_1_R1.fastq.gz --out2 1029_FZX-T1-TDNA-1_A23MHWWLT4_1/1029_FZX-T1-TDNA-1_A23MHWWLT4_1_R2.fastq.gz --detect_adapter_for_pe --length_required 15 --json 1029_FZX-T1-TDNA-1_A23MHWWLT4_1.fastp.json --html 1029_FZX-T1-TDNA-1_A23MHWWLT4_1.fastp.html --thread 4
fastp v1.0.1, time used: 716 seconds