File Info
- Filename
- output/Reports/Adapter_Metrics.csv
- Full Path
- s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e6/1a973e9635583ceb00b90f4696f91d/output/Reports/Adapter_Metrics.csv
- Size
- 7.4 KB
- Attempt
Content
View in new tab| Lane | Sample_ID | index | index2 | ReadNumber | AdapterBases | SampleBases | % Adapter Bases |
| 5 | 1029_N5D-T1-TDNA-1_A23MHWWLT4_1 | TAGCGAGGCT | TTGCTCACGG | 1 | 0 | 19480694069 | 0.000 |
| 5 | 1029_N5D-T1-TDNA-1_A23MHWWLT4_1 | TAGCGAGGCT | TTGCTCACGG | 2 | 0 | 19480694069 | 0.000 |
| 5 | 1136_4Z5-T1-TDNA-1_A23MHWWLT4_1 | CCAACTGTAT | GCGCTAGAGA | 1 | 0 | 14155813761 | 0.000 |
| 5 | 1136_4Z5-T1-TDNA-1_A23MHWWLT4_1 | CCAACTGTAT | GCGCTAGAGA | 2 | 0 | 14155813761 | 0.000 |
| 5 | FFPE_HD789_01_p2_gDNA_01_A23MHWWLT4_1 | GAGTAGTGAC | GCGATGCCAA | 1 | 0 | 11946392029 | 0.000 |
| 5 | FFPE_HD789_01_p2_gDNA_01_A23MHWWLT4_1 | GAGTAGTGAC | GCGATGCCAA | 2 | 0 | 11946392029 | 0.000 |
| 5 | NTC_0002_0015_A23MHWWLT4_1 | CCAGTATTCT | ACGAAGCGAT | 1 | 0 | 908114 | 0.000 |
| 5 | NTC_0002_0015_A23MHWWLT4_1 | CCAGTATTCT | ACGAAGCGAT | 2 | 0 | 908114 | 0.000 |
| 5 | 1136_85O-T1-TDNA-1_A23MHWWLT4_1 | ATCATACCGC | ATGTCGTACT | 1 | 0 | 8117872797 | 0.000 |
| 5 | 1136_85O-T1-TDNA-1_A23MHWWLT4_1 | ATCATACCGC | ATGTCGTACT | 2 | 0 | 8117872797 | 0.000 |
| 5 | 1136_8DV-T1-TDNA-1_A23MHWWLT4_1 | ATTCGCACTA | TCTGTATGGT | 1 | 0 | 8567753137 | 0.000 |
| 5 | 1136_8DV-T1-TDNA-1_A23MHWWLT4_1 | ATTCGCACTA | TCTGTATGGT | 2 | 0 | 8567753137 | 0.000 |
| 5 | 1029_IWL-T1-TDNA-1_A23MHWWLT4_1 | CTCTTCAGCA | TTGTCTCTAC | 1 | 0 | 6616617660 | 0.000 |
| 5 | 1029_IWL-T1-TDNA-1_A23MHWWLT4_1 | CTCTTCAGCA | TTGTCTCTAC | 2 | 0 | 6616617660 | 0.000 |
| 5 | 659_cuO-T1-TDNA-1_A23MHWWLT4_1 | CTGTATGCCA | TTCCGGCTGT | 1 | 0 | 1688879130 | 0.000 |
| 5 | 659_cuO-T1-TDNA-1_A23MHWWLT4_1 | CTGTATGCCA | TTCCGGCTGT | 2 | 0 | 1688879130 | 0.000 |
| 5 | 1136_3U6-T1-TDNA-1_A23MHWWLT4_1 | TCTGACTATG | TAACCAGATC | 1 | 0 | 18190832892 | 0.000 |
| 5 | 1136_3U6-T1-TDNA-1_A23MHWWLT4_1 | TCTGACTATG | TAACCAGATC | 2 | 0 | 18190832892 | 0.000 |
| 5 | 659_dm4-T1-TDNA-1_A23MHWWLT4_1 | TGTGACGTAT | GCAGCGTTAG | 1 | 0 | 10360365039 | 0.000 |
| 5 | 659_dm4-T1-TDNA-1_A23MHWWLT4_1 | TGTGACGTAT | GCAGCGTTAG | 2 | 0 | 10360365039 | 0.000 |
| 5 | 659_bgw-T1-TDNA-1_A23MHWWLT4_1 | AGAAGATTGG | AGAAGGTACT | 1 | 0 | 12168290304 | 0.000 |
| 5 | 659_bgw-T1-TDNA-1_A23MHWWLT4_1 | AGAAGATTGG | AGAAGGTACT | 2 | 0 | 12168290304 | 0.000 |
| 5 | 659_eKx-T1-TDNA-1_A23MHWWLT4_1 | ATCCAGCATG | AGAGCTCTAC | 1 | 0 | 35341399 | 0.000 |
| 5 | 659_eKx-T1-TDNA-1_A23MHWWLT4_1 | ATCCAGCATG | AGAGCTCTAC | 2 | 0 | 35341399 | 0.000 |
| 5 | 1136_4ZB-T1-TDNA-1_A23MHWWLT4_1 | GCGCCATATA | GAACCTCCTA | 1 | 0 | 7739930669 | 0.000 |
| 5 | 1136_4ZB-T1-TDNA-1_A23MHWWLT4_1 | GCGCCATATA | GAACCTCCTA | 2 | 0 | 7739930669 | 0.000 |
| 5 | 1136_5L2-T1-TDNA-1_A23MHWWLT4_1 | CACTCGCATA | GAACGCGACA | 1 | 0 | 9537142635 | 0.000 |
| 5 | 1136_5L2-T1-TDNA-1_A23MHWWLT4_1 | CACTCGCATA | GAACGCGACA | 2 | 0 | 9537142635 | 0.000 |
| 5 | 659_Lx-T1-TDNA-1_A23MHWWLT4_1 | AAGGTCAATG | GCATTATAGG | 1 | 0 | 42783585 | 0.000 |
| 5 | 659_Lx-T1-TDNA-1_A23MHWWLT4_1 | AAGGTCAATG | GCATTATAGG | 2 | 0 | 42783585 | 0.000 |
| 5 | 1136_4GR-T1-TDNA-1_A23MHWWLT4_1 | GTGACGCACA | CGTTGTTGCG | 1 | 0 | 9742705428 | 0.000 |
| 5 | 1136_4GR-T1-TDNA-1_A23MHWWLT4_1 | GTGACGCACA | CGTTGTTGCG | 2 | 0 | 9742705428 | 0.000 |
| 5 | 1136_6TL-T1-TDNA-1_A23MHWWLT4_1 | TGTCAGGCTT | GATTCCTTAC | 1 | 0 | 8492055176 | 0.000 |
| 5 | 1136_6TL-T1-TDNA-1_A23MHWWLT4_1 | TGTCAGGCTT | GATTCCTTAC | 2 | 0 | 8492055176 | 0.000 |
| 5 | 1136_27F-T1-TDNA-1_A23MHWWLT4_1 | CACGTGATGG | TACAACGTGT | 1 | 0 | 19197229470 | 0.000 |
| 5 | 1136_27F-T1-TDNA-1_A23MHWWLT4_1 | CACGTGATGG | TACAACGTGT | 2 | 0 | 19197229470 | 0.000 |
| 5 | 1029_T05-T1-TDNA-1_A23MHWWLT4_1 | CCATCACGTG | TCTCCTGGTT | 1 | 0 | 14507036741 | 0.000 |
| 5 | 1029_T05-T1-TDNA-1_A23MHWWLT4_1 | CCATCACGTG | TCTCCTGGTT | 2 | 0 | 14507036741 | 0.000 |
| 5 | 659_d0M-T1-TDNA-1_A23MHWWLT4_1 | ACCAGGAATT | AGCATGGCAT | 1 | 0 | 11732065196 | 0.000 |
| 5 | 659_d0M-T1-TDNA-1_A23MHWWLT4_1 | ACCAGGAATT | AGCATGGCAT | 2 | 0 | 11732065196 | 0.000 |
| 5 | 659_Kh-T1-TDNA-1_A23MHWWLT4_1 | TAAGGCTCAC | GACGTTACTT | 1 | 0 | 10942332025 | 0.000 |
| 5 | 659_Kh-T1-TDNA-1_A23MHWWLT4_1 | TAAGGCTCAC | GACGTTACTT | 2 | 0 | 10942332025 | 0.000 |
| 5 | 1029_BICJ-T1-TDNA-1_A23MHWWLT4_1 | TGGCACTGAT | GCCATAGAAT | 1 | 0 | 9294413608 | 0.000 |
| 5 | 1029_BICJ-T1-TDNA-1_A23MHWWLT4_1 | TGGCACTGAT | GCCATAGAAT | 2 | 0 | 9294413608 | 0.000 |
| 5 | 1029_HTI-T1-TDNA-1_A23MHWWLT4_1 | CATATGGTGC | ACAGATCTCA | 1 | 0 | 13608163639 | 0.000 |
| 5 | 1029_HTI-T1-TDNA-1_A23MHWWLT4_1 | CATATGGTGC | ACAGATCTCA | 2 | 0 | 13608163639 | 0.000 |
| 5 | 1136_86S-T1-TDNA-1_A23MHWWLT4_1 | GCACTACCAG | GAAGACTTAG | 1 | 0 | 13273374442 | 0.000 |
| 5 | 1136_86S-T1-TDNA-1_A23MHWWLT4_1 | GCACTACCAG | GAAGACTTAG | 2 | 0 | 13273374442 | 0.000 |
| 5 | 1136_5KC-T1-TDNA-1_A23MHWWLT4_1 | GCATAAGATC | GAGAACTGGA | 1 | 0 | 9335618035 | 0.000 |
| 5 | 1136_5KC-T1-TDNA-1_A23MHWWLT4_1 | GCATAAGATC | GAGAACTGGA | 2 | 0 | 9335618035 | 0.000 |
| 5 | 1136_5TB-T1-TDNA-1_A23MHWWLT4_1 | AAGGTGTACT | AGCGCTACAG | 1 | 0 | 17050012641 | 0.000 |
| 5 | 1136_5TB-T1-TDNA-1_A23MHWWLT4_1 | AAGGTGTACT | AGCGCTACAG | 2 | 0 | 17050012641 | 0.000 |
| 5 | 1029_I9B-T1-TDNA-1_A23MHWWLT4_1 | CTTCTAACCG | TGATCAGTCT | 1 | 0 | 14513406676 | 0.000 |
| 5 | 1029_I9B-T1-TDNA-1_A23MHWWLT4_1 | CTTCTAACCG | TGATCAGTCT | 2 | 0 | 14513406676 | 0.000 |
| 5 | 1136_00H-T1-TDNA-1_A23MHWWLT4_1 | TCGACCAGCA | GTTCGAACTC | 1 | 0 | 12921527983 | 0.000 |
| 5 | 1136_00H-T1-TDNA-1_A23MHWWLT4_1 | TCGACCAGCA | GTTCGAACTC | 2 | 0 | 12921527983 | 0.000 |
| 5 | 1029_BCAN-T1-TDNA-1_A23MHWWLT4_1 | GTGACACGTC | CTTACACTGA | 1 | 0 | 4995443004 | 0.000 |
| 5 | 1029_BCAN-T1-TDNA-1_A23MHWWLT4_1 | GTGACACGTC | CTTACACTGA | 2 | 0 | 4995443004 | 0.000 |
| 5 | 1136_253-T1-TDNA-1_A23MHWWLT4_1 | AATGGACGCG | AAGTGCACCG | 1 | 0 | 12099342798 | 0.000 |
| 5 | 1136_253-T1-TDNA-1_A23MHWWLT4_1 | AATGGACGCG | AAGTGCACCG | 2 | 0 | 12099342798 | 0.000 |
| 5 | 1136_5Q-T1-TDNA-1_A23MHWWLT4_1 | TCTCCGTACT | AGTTGTGATC | 1 | 0 | 11375465408 | 0.000 |
| 5 | 1136_5Q-T1-TDNA-1_A23MHWWLT4_1 | TCTCCGTACT | AGTTGTGATC | 2 | 0 | 11375465408 | 0.000 |
| 5 | 659_cfy-T1-TDNA-1_A23MHWWLT4_1 | TGGAAGCACA | TCCAACACCG | 1 | 0 | 13294384129 | 0.000 |
| 5 | 659_cfy-T1-TDNA-1_A23MHWWLT4_1 | TGGAAGCACA | TCCAACACCG | 2 | 0 | 13294384129 | 0.000 |
| 5 | 1136_7OW-T1-TDNA-1_A23MHWWLT4_1 | GATAGACAAC | GTGTTCACGT | 1 | 0 | 12253759173 | 0.000 |
| 5 | 1136_7OW-T1-TDNA-1_A23MHWWLT4_1 | GATAGACAAC | GTGTTCACGT | 2 | 0 | 12253759173 | 0.000 |
| 5 | 1136_87O-T1-TDNA-1_A23MHWWLT4_1 | AGCGTCTCAT | CCTAGGCGAT | 1 | 0 | 12212954292 | 0.000 |
| 5 | 1136_87O-T1-TDNA-1_A23MHWWLT4_1 | AGCGTCTCAT | CCTAGGCGAT | 2 | 0 | 12212954292 | 0.000 |
| 5 | 1029_FRC-T1-TDNA-1_A23MHWWLT4_1 | CTCTATACTG | CGTTCAACCG | 1 | 0 | 13286639943 | 0.000 |
| 5 | 1029_FRC-T1-TDNA-1_A23MHWWLT4_1 | CTCTATACTG | CGTTCAACCG | 2 | 0 | 13286639943 | 0.000 |
| 5 | 1029_FZX-T1-TDNA-1_A23MHWWLT4_1 | ATAGCCGGTT | TCTTATCCGG | 1 | 0 | 12047508575 | 0.000 |
| 5 | 1029_FZX-T1-TDNA-1_A23MHWWLT4_1 | ATAGCCGGTT | TCTTATCCGG | 2 | 0 | 12047508575 | 0.000 |
| 5 | 1136_3MV-T1-TDNA-1_A23MHWWLT4_1 | GTTCTCATCA | CCTCCATTCT | 1 | 0 | 11856828946 | 0.000 |
| 5 | 1136_3MV-T1-TDNA-1_A23MHWWLT4_1 | GTTCTCATCA | CCTCCATTCT | 2 | 0 | 11856828946 | 0.000 |
| 5 | 659_bR4-T1-TDNA-1_A23MHWWLT4_1 | CAATGCGTGT | ATGTTCGCGC | 1 | 0 | 15269069264 | 0.000 |
| 5 | 659_bR4-T1-TDNA-1_A23MHWWLT4_1 | CAATGCGTGT | ATGTTCGCGC | 2 | 0 | 15269069264 | 0.000 |
| 5 | 659_cVw-T1-TDNA-1_A23MHWWLT4_1 | TGAGTGTACA | ATTCGCCGGT | 1 | 0 | 14824489628 | 0.000 |
| 5 | 659_cVw-T1-TDNA-1_A23MHWWLT4_1 | TGAGTGTACA | ATTCGCCGGT | 2 | 0 | 14824489628 | 0.000 |
| 5 | 1136_7GC-T1-TDNA-1_A23MHWWLT4_1 | TGCTTCCAAG | CAGATGTTAC | 1 | 0 | 14296903782 | 0.000 |
| 5 | 1136_7GC-T1-TDNA-1_A23MHWWLT4_1 | TGCTTCCAAG | CAGATGTTAC | 2 | 0 | 14296903782 | 0.000 |
| 5 | 1136_76X-T1-TDNA-1_A23MHWWLT4_1 | CCTACTCTGC | TGCAATTGGC | 1 | 0 | 10226834682 | 0.000 |
| 5 | 1136_76X-T1-TDNA-1_A23MHWWLT4_1 | CCTACTCTGC | TGCAATTGGC | 2 | 0 | 10226834682 | 0.000 |
| 5 | 1047_JG-T1-TDNA-1_A23MHWWLT4_1 | TCGCTGAGAG | AATGCTCTAG | 1 | 0 | 28979915017 | 0.000 |
| 5 | 1047_JG-T1-TDNA-1_A23MHWWLT4_1 | TCGCTGAGAG | AATGCTCTAG | 2 | 0 | 28979915017 | 0.000 |
| 5 | 1136_3LU-T1-TDNA-1_A23MHWWLT4_1 | CGCTAATTGC | CCATCGCATT | 1 | 0 | 13506559212 | 0.000 |
| 5 | 1136_3LU-T1-TDNA-1_A23MHWWLT4_1 | CGCTAATTGC | CCATCGCATT | 2 | 0 | 13506559212 | 0.000 |
| 5 | 659_cAd-T1-TDNA-1_A23MHWWLT4_1 | TCAGCTGTCA | ACAGCTCCTG | 1 | 0 | 11530230744 | 0.000 |
| 5 | 659_cAd-T1-TDNA-1_A23MHWWLT4_1 | TCAGCTGTCA | ACAGCTCCTG | 2 | 0 | 11530230744 | 0.000 |
| 5 | 1136_3WJ-T1-TDNA-1_A23MHWWLT4_1 | AGACGACAGA | GAGCTGGAAT | 1 | 0 | 6958812803 | 0.000 |
| 5 | 1136_3WJ-T1-TDNA-1_A23MHWWLT4_1 | AGACGACAGA | GAGCTGGAAT | 2 | 0 | 6958812803 | 0.000 |
| 5 | 1136_6G2-T1-TDNA-1_A23MHWWLT4_1 | TAGGTCCAGA | TGCTCATCCG | 1 | 0 | 10193765984 | 0.000 |
| 5 | 1136_6G2-T1-TDNA-1_A23MHWWLT4_1 | TAGGTCCAGA | TGCTCATCCG | 2 | 0 | 10193765984 | 0.000 |
| 5 | 1136_4XR-T1-TDNA-1_A23MHWWLT4_1 | TAACCTGAAC | TCAATTGACG | 1 | 0 | 11384309176 | 0.000 |
| 5 | 1136_4XR-T1-TDNA-1_A23MHWWLT4_1 | TAACCTGAAC | TCAATTGACG | 2 | 0 | 11384309176 | 0.000 |
| 5 | 1136_81F-T1-TDNA-1_A23MHWWLT4_1 | GATAGGTGAA | AGACGCAAGA | 1 | 0 | 11030792808 | 0.000 |
| 5 | 1136_81F-T1-TDNA-1_A23MHWWLT4_1 | GATAGGTGAA | AGACGCAAGA | 2 | 0 | 11030792808 | 0.000 |
| 5 | Undetermined | 1 | 0 | 21449872083 | 0.000 | ||
| 5 | Undetermined | 2 | 0 | 21449872083 | 0.000 |
99 rows