This software is licensed to bgold@natera.com by Sentieon Inc. cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/util sort -r Homo_sapiens_assembly38.fasta -t 31 -o 1136_4ZB-T1-TDNA-1_A23MHWWLT4_1.bam --sam2bam - This software is licensed to bgold@natera.com by Sentieon Inc. version: sentieon-genomics-202308.03 [M::bwa_idx_load_from_disk] read 3171 ALT contigs [M::main_mem] bwa index loaded in 1552.245 CPU sec, 53.299 real sec [M::process] read 708392 sequences (100000207 bp) in 0.969 CPU sec, 0.975 real sec... [M::process] read 706544 sequences (100000076 bp) in 1.210 CPU sec, 1.205 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (61, 289491, 15, 62) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (175, 288, 421) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 913) [M::mem_pestat] mean and std.dev: (302.14, 184.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1159) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (146, 213, 306) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 626) [M::mem_pestat] mean and std.dev: (235.42, 114.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 786) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (318, 405, 1819) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4821) [M::mem_pestat] mean and std.dev: (746.36, 646.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6322) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (200, 284, 497) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1091) [M::mem_pestat] mean and std.dev: (317.77, 175.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1388) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 706506 sequences (100000216 bp) in 1.490 CPU sec, 1.495 real sec... [M::process] read 705906 sequences (100000185 bp) in 1.500 CPU sec, 1.501 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (65, 288964, 17, 64) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (166, 245, 804) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2080) [M::mem_pestat] mean and std.dev: (461.68, 478.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2718) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (149, 217, 313) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 641) [M::mem_pestat] mean and std.dev: (240.26, 117.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 805) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (108, 982, 1614) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4626) [M::mem_pestat] mean and std.dev: (1057.27, 1128.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6132) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (204, 317, 601) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1395) [M::mem_pestat] mean and std.dev: (366.48, 229.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1792) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 708392 reads in 162.331 CPU sec, 5.105 real sec [M::mem_process_seqs] Processed 706544 reads in 107.082 CPU sec, 3.404 real sec sorting block 0, #reads = 1087060 mem = 536881937 peak = 616603648 [M::process] read 705266 sequences (100000217 bp) in 1.838 CPU sec, 1.908 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (61, 289321, 26, 46) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (142, 245, 821) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2179) [M::mem_pestat] mean and std.dev: (476.14, 500.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2858) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (149, 219, 318) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 656) [M::mem_pestat] mean and std.dev: (243.32, 120.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 825) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (128, 374, 1207) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3365) [M::mem_pestat] mean and std.dev: (563.44, 549.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4444) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (185, 254, 345) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 665) [M::mem_pestat] mean and std.dev: (256.55, 116.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 825) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 705008 sequences (100000205 bp) in 1.480 CPU sec, 1.481 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (53, 288777, 24, 79) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (148, 218, 774) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2026) [M::mem_pestat] mean and std.dev: (385.40, 431.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2652) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (150, 219, 318) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 654) [M::mem_pestat] mean and std.dev: (243.70, 120.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 822) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (182, 663, 1038) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2750) [M::mem_pestat] mean and std.dev: (640.14, 515.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3606) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (184, 258, 503) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1141) [M::mem_pestat] mean and std.dev: (313.29, 205.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1460) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 706506 reads in 157.082 CPU sec, 4.982 real sec [M::mem_process_seqs] Processed 705906 reads in 175.322 CPU sec, 5.579 real sec sorting block 1, #reads = 1086607 mem = 536880081 peak = 748724224 [M::process] read 704146 sequences (100000042 bp) in 1.837 CPU sec, 1.900 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (44, 288492, 25, 77) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (172, 274, 313) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 595) [M::mem_pestat] mean and std.dev: (234.08, 93.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 736) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (151, 222, 323) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 667) [M::mem_pestat] mean and std.dev: (246.69, 121.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 839) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (146, 360, 1517) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4259) [M::mem_pestat] mean and std.dev: (795.71, 1014.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5630) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (169, 276, 368) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 766) [M::mem_pestat] mean and std.dev: (267.39, 134.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 965) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 703840 sequences (100000257 bp) in 1.430 CPU sec, 1.432 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (75, 289128, 34, 72) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (151, 246, 512) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1234) [M::mem_pestat] mean and std.dev: (338.34, 268.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1595) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (150, 221, 322) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 666) [M::mem_pestat] mean and std.dev: (246.18, 122.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 838) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (286, 507, 2526) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7006) [M::mem_pestat] mean and std.dev: (1435.97, 1653.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9246) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (168, 315, 610) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1494) [M::mem_pestat] mean and std.dev: (415.65, 355.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1936) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 705008 reads in 155.447 CPU sec, 4.935 real sec sorting block 2, #reads = 1085505 mem = 536877810 peak = 869650432 [M::mem_process_seqs] Processed 705266 reads in 173.726 CPU sec, 5.533 real sec [M::process] read 703900 sequences (100000121 bp) in 1.921 CPU sec, 2.022 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (40, 288939, 17, 64) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (144, 197, 324) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 684) [M::mem_pestat] mean and std.dev: (239.00, 128.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 864) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 224, 326) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 674) [M::mem_pestat] mean and std.dev: (248.78, 122.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 848) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (336, 944, 1593) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4107) [M::mem_pestat] mean and std.dev: (844.69, 664.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5364) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (205, 365, 658) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1564) [M::mem_pestat] mean and std.dev: (361.64, 251.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2017) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 703362 sequences (100000199 bp) in 1.280 CPU sec, 1.278 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (45, 287840, 17, 80) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (163, 219, 361) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 757) [M::mem_pestat] mean and std.dev: (226.76, 83.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 955) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (153, 226, 328) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 678) [M::mem_pestat] mean and std.dev: (249.96, 123.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 853) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (403, 596, 2705) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7309) [M::mem_pestat] mean and std.dev: (1530.31, 1945.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9611) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (180, 284, 1151) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3093) [M::mem_pestat] mean and std.dev: (550.24, 547.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4064) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (64, 288586, 21, 100) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (194, 304, 606) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1430) [M::mem_pestat] mean and std.dev: (344.32, 246.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1842) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 225, 328) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 680) [M::mem_pestat] mean and std.dev: (249.99, 124.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 856) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (126, 288, 863) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2337) [M::mem_pestat] mean and std.dev: (516.48, 507.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3074) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (234, 331, 515) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1077) [M::mem_pestat] mean and std.dev: (358.69, 196.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1358) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 704146 reads in 224.049 CPU sec, 7.156 real sec sorting block 3, #reads = 1085735 mem = 536880031 peak = 869650432 [M::mem_process_seqs] Processed 703840 reads in 171.354 CPU sec, 5.496 real sec [M::mem_process_seqs] Processed 703900 reads in 189.487 CPU sec, 6.100 real sec sorting block 4, #reads = 1084269 mem = 536878257 peak = 921673728 [M::process] read 702190 sequences (100000033 bp) in 2.163 CPU sec, 2.301 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (60, 287670, 23, 67) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (147, 220, 318) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 660) [M::mem_pestat] mean and std.dev: (208.87, 107.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 831) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (153, 227, 329) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 681) [M::mem_pestat] mean and std.dev: (251.16, 124.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 857) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (39, 593, 1915) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5667) [M::mem_pestat] mean and std.dev: (902.17, 930.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7543) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (188, 263, 494) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1106) [M::mem_pestat] mean and std.dev: (313.61, 200.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1412) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 701698 sequences (100000207 bp) in 1.849 CPU sec, 1.907 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (47, 287937, 18, 59) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (161, 226, 467) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1079) [M::mem_pestat] mean and std.dev: (295.36, 203.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1385) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (155, 229, 330) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 680) [M::mem_pestat] mean and std.dev: (252.23, 124.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 855) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (162, 917, 940) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2496) [M::mem_pestat] mean and std.dev: (571.44, 554.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3274) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (199, 282, 510) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1132) [M::mem_pestat] mean and std.dev: (293.44, 152.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1443) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 703362 reads in 158.428 CPU sec, 5.035 real sec sorting block 5, #reads = 1085541 mem = 536881576 peak = 921673728 [M::mem_process_seqs] Processed 702190 reads in 105.137 CPU sec, 3.308 real sec [M::process] read 701142 sequences (100000284 bp) in 1.944 CPU sec, 2.023 real sec... sorting block 6, #reads = 1084048 mem = 536882270 peak = 921673728 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (56, 287052, 7, 73) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (162, 252, 456) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1044) [M::mem_pestat] mean and std.dev: (282.00, 198.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1338) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (156, 230, 332) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 684) [M::mem_pestat] mean and std.dev: (253.35, 123.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 860) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (203, 280, 399) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 791) [M::mem_pestat] mean and std.dev: (287.28, 123.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 987) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 701742 sequences (100000012 bp) in 2.344 CPU sec, 2.454 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (71, 288009, 14, 71) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (188, 261, 1073) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2843) [M::mem_pestat] mean and std.dev: (484.80, 492.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3728) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (156, 232, 333) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 687) [M::mem_pestat] mean and std.dev: (254.56, 124.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 864) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (233, 489, 844) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2066) [M::mem_pestat] mean and std.dev: (463.85, 291.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2677) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (185, 240, 502) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1136) [M::mem_pestat] mean and std.dev: (317.02, 241.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1453) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 701672 sequences (100000155 bp) in 1.610 CPU sec, 1.608 real sec... [M::mem_process_seqs] Processed 701698 reads in 156.823 CPU sec, 4.992 real sec [M::mem_process_seqs] Processed 701142 reads in 104.128 CPU sec, 3.310 real sec sorting block 7, #reads = 1082749 mem = 536879228 peak = 921673728 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (59, 287395, 44, 61) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (135, 172, 526) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1308) [M::mem_pestat] mean and std.dev: (277.36, 235.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1699) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (156, 230, 332) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 684) [M::mem_pestat] mean and std.dev: (253.49, 124.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 860) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (269, 487, 886) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2120) [M::mem_pestat] mean and std.dev: (554.51, 448.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2737) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (179, 266, 415) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 887) [M::mem_pestat] mean and std.dev: (277.54, 138.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1123) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 701590 sequences (100000227 bp) in 2.230 CPU sec, 2.376 real sec... [M::process] read 701342 sequences (100000087 bp) in 1.390 CPU sec, 1.382 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (58, 287256, 25, 66) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (130, 258, 349) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 787) [M::mem_pestat] mean and std.dev: (237.24, 122.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1006) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (156, 229, 328) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 672) [M::mem_pestat] mean and std.dev: (250.91, 121.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 844) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (397, 1239, 1808) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4630) [M::mem_pestat] mean and std.dev: (874.00, 657.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6041) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (225, 294, 660) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1530) [M::mem_pestat] mean and std.dev: (371.88, 298.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1965) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 701742 reads in 156.788 CPU sec, 5.182 real sec [M::mem_process_seqs] Processed 701672 reads in 102.158 CPU sec, 3.335 real sec sorting block 8, #reads = 1081929 mem = 536878065 peak = 921673728 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (60, 287149, 14, 54) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (180, 246, 452) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 996) [M::mem_pestat] mean and std.dev: (276.23, 174.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1268) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (156, 230, 328) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 672) [M::mem_pestat] mean and std.dev: (251.41, 121.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 844) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (671, 1356, 2591) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6431) [M::mem_pestat] mean and std.dev: (1743.57, 1412.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8351) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (188, 251, 447) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 965) [M::mem_pestat] mean and std.dev: (278.15, 142.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1224) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 701794 sequences (100000171 bp) in 2.237 CPU sec, 2.385 real sec... [M::process] read 704400 sequences (100000285 bp) in 1.420 CPU sec, 1.423 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (66, 287279, 26, 83) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (133, 217, 332) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 730) [M::mem_pestat] mean and std.dev: (221.91, 120.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 929) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (156, 231, 333) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 687) [M::mem_pestat] mean and std.dev: (254.24, 124.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 864) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (203, 500, 1328) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3578) [M::mem_pestat] mean and std.dev: (676.96, 695.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4703) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (184, 307, 493) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1111) [M::mem_pestat] mean and std.dev: (290.65, 156.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1420) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 701590 reads in 170.934 CPU sec, 5.538 real sec sorting block 9, #reads = 1082204 mem = 536882128 peak = 921673728 [M::mem_process_seqs] Processed 701342 reads in 106.686 CPU sec, 3.489 real sec sorting block 10, #reads = 1079585 mem = 536881792 peak = 921673728 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (69, 287312, 19, 60) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (172, 250, 466) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1054) [M::mem_pestat] mean and std.dev: (293.12, 155.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1348) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (155, 229, 330) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 680) [M::mem_pestat] mean and std.dev: (252.50, 123.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 855) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (424, 542, 1327) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3133) [M::mem_pestat] mean and std.dev: (609.65, 478.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4036) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (188, 269, 357) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 695) [M::mem_pestat] mean and std.dev: (253.07, 92.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 864) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 707138 sequences (100000292 bp) in 2.215 CPU sec, 2.327 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (63, 288214, 31, 62) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (169, 315, 874) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2284) [M::mem_pestat] mean and std.dev: (582.25, 651.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3189) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 222, 322) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 662) [M::mem_pestat] mean and std.dev: (246.63, 121.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 832) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (401, 605, 1102) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2504) [M::mem_pestat] mean and std.dev: (627.74, 403.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3205) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (171, 263, 388) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 822) [M::mem_pestat] mean and std.dev: (283.77, 134.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1039) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 705674 sequences (100000075 bp) in 1.800 CPU sec, 1.799 real sec... [M::mem_process_seqs] Processed 701794 reads in 159.039 CPU sec, 5.117 real sec [M::mem_process_seqs] Processed 704400 reads in 102.570 CPU sec, 3.246 real sec sorting block 11, #reads = 1081261 mem = 536886536 peak = 921673728 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (50, 288997, 22, 78) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (166, 251, 328) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 652) [M::mem_pestat] mean and std.dev: (241.24, 109.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 814) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (148, 215, 310) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 634) [M::mem_pestat] mean and std.dev: (238.00, 116.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 796) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (428, 536, 1672) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4160) [M::mem_pestat] mean and std.dev: (961.65, 1122.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5451) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (194, 295, 449) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 959) [M::mem_pestat] mean and std.dev: (293.33, 142.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1214) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 705700 sequences (100000024 bp) in 2.399 CPU sec, 2.516 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (42, 288900, 18, 55) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (154, 256, 549) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1339) [M::mem_pestat] mean and std.dev: (310.26, 210.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1734) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (150, 219, 318) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 654) [M::mem_pestat] mean and std.dev: (243.08, 119.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 822) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (723, 1217, 1737) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3765) [M::mem_pestat] mean and std.dev: (1221.41, 736.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4779) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (234, 339, 455) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 897) [M::mem_pestat] mean and std.dev: (333.53, 154.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1118) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 705458 sequences (100000284 bp) in 1.800 CPU sec, 1.800 real sec... [M::mem_process_seqs] Processed 707138 reads in 151.959 CPU sec, 4.892 real sec [M::mem_process_seqs] Processed 705674 reads in 98.730 CPU sec, 3.121 real sec sorting block 12, #reads = 1084696 mem = 536878950 peak = 921673728 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (55, 288658, 10, 60) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (188, 301, 515) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1169) [M::mem_pestat] mean and std.dev: (307.66, 191.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1496) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (150, 220, 319) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 657) [M::mem_pestat] mean and std.dev: (244.20, 120.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 826) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (373, 1780, 2169) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5761) [M::mem_pestat] mean and std.dev: (1577.20, 888.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7557) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (184, 271, 880) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2272) [M::mem_pestat] mean and std.dev: (403.43, 369.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2968) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 704798 sequences (100000284 bp) in 2.468 CPU sec, 2.592 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (53, 288865, 24, 75) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (167, 386, 1703) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4775) [M::mem_pestat] mean and std.dev: (564.39, 777.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6311) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (150, 221, 320) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 660) [M::mem_pestat] mean and std.dev: (244.83, 120.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 830) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (280, 710, 996) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2428) [M::mem_pestat] mean and std.dev: (652.09, 536.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3144) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (170, 277, 499) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1157) [M::mem_pestat] mean and std.dev: (312.42, 186.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1486) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 705700 reads in 150.365 CPU sec, 4.789 real sec [M::process] read 705008 sequences (100000157 bp) in 1.790 CPU sec, 1.798 real sec... sorting block 13, #reads = 1087364 mem = 536881961 peak = 921673728 [M::mem_process_seqs] Processed 705458 reads in 99.604 CPU sec, 3.254 real sec sorting block 14, #reads = 1086391 mem = 536879055 peak = 921976832 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (54, 288326, 21, 56) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (161, 216, 363) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 767) [M::mem_pestat] mean and std.dev: (240.58, 127.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 969) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (151, 222, 323) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 667) [M::mem_pestat] mean and std.dev: (246.61, 122.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 839) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (97, 381, 817) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2257) [M::mem_pestat] mean and std.dev: (467.62, 433.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2977) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (178, 279, 805) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2059) [M::mem_pestat] mean and std.dev: (452.35, 399.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2686) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 704424 sequences (100000198 bp) in 2.301 CPU sec, 2.439 real sec... [M::process] read 703690 sequences (100000264 bp) in 1.420 CPU sec, 1.421 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (51, 288621, 31, 70) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (261, 326, 480) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 918) [M::mem_pestat] mean and std.dev: (268.07, 117.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1137) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (151, 222, 322) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 664) [M::mem_pestat] mean and std.dev: (246.43, 121.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 835) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (356, 697, 1648) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4232) [M::mem_pestat] mean and std.dev: (1037.42, 1010.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5524) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (151, 282, 463) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1087) [M::mem_pestat] mean and std.dev: (320.87, 210.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1399) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 704798 reads in 155.554 CPU sec, 5.043 real sec [M::mem_process_seqs] Processed 705008 reads in 100.463 CPU sec, 3.288 real sec sorting block 15, #reads = 1085369 mem = 536881171 peak = 921976832 [M::process] read 703684 sequences (100000083 bp) in 2.246 CPU sec, 2.373 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (56, 288396, 21, 51) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (159, 267, 439) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 999) [M::mem_pestat] mean and std.dev: (271.18, 152.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1279) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (153, 226, 327) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 675) [M::mem_pestat] mean and std.dev: (249.58, 123.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 849) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (429, 848, 2052) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5298) [M::mem_pestat] mean and std.dev: (1250.14, 910.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6921) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (170, 254, 628) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1544) [M::mem_pestat] mean and std.dev: (390.90, 283.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2002) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 703952 sequences (100000009 bp) in 1.820 CPU sec, 1.823 real sec... [M::mem_process_seqs] Processed 703690 reads in 84.752 CPU sec, 2.676 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (66, 288109, 13, 75) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (177, 245, 463) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1035) [M::mem_pestat] mean and std.dev: (315.93, 227.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1321) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 224, 325) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 671) [M::mem_pestat] mean and std.dev: (248.20, 123.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 844) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (50, 228, 1945) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5735) [M::mem_pestat] mean and std.dev: (720.77, 1109.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7630) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (235, 339, 768) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1834) [M::mem_pestat] mean and std.dev: (488.18, 360.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2367) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 16, #reads = 1084245 mem = 536878192 peak = 921976832 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (73, 288403, 18, 54) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (149, 253, 587) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1463) [M::mem_pestat] mean and std.dev: (330.64, 246.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1901) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (153, 226, 327) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 675) [M::mem_pestat] mean and std.dev: (249.39, 122.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 849) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (132, 443, 933) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2535) [M::mem_pestat] mean and std.dev: (654.29, 740.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3615) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (187, 271, 660) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1606) [M::mem_pestat] mean and std.dev: (429.04, 376.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2079) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 704424 reads in 226.784 CPU sec, 7.282 real sec [M::process] read 703190 sequences (100000086 bp) in 2.141 CPU sec, 2.159 real sec... [M::mem_process_seqs] Processed 703684 reads in 112.284 CPU sec, 3.558 real sec sorting block 17, #reads = 1085289 mem = 536878187 peak = 921976832 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (74, 287474, 32, 68) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (175, 246, 385) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 805) [M::mem_pestat] mean and std.dev: (284.51, 150.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1015) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (153, 225, 327) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 675) [M::mem_pestat] mean and std.dev: (249.81, 123.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 849) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (700, 1113, 2344) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5632) [M::mem_pestat] mean and std.dev: (1406.34, 1111.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7276) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (219, 310, 429) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 849) [M::mem_pestat] mean and std.dev: (313.79, 151.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1059) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 702578 sequences (100000263 bp) in 2.619 CPU sec, 2.775 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (69, 288639, 15, 53) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (183, 239, 369) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 741) [M::mem_pestat] mean and std.dev: (249.36, 94.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 927) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (154, 227, 328) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 676) [M::mem_pestat] mean and std.dev: (250.89, 123.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 850) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (460, 730, 1602) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3886) [M::mem_pestat] mean and std.dev: (970.00, 750.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5028) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (157, 270, 365) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 781) [M::mem_pestat] mean and std.dev: (249.64, 100.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 989) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 703952 reads in 146.526 CPU sec, 4.652 real sec [M::process] read 702012 sequences (100000191 bp) in 1.838 CPU sec, 1.887 real sec... [M::mem_process_seqs] Processed 703190 reads in 103.901 CPU sec, 3.280 real sec sorting block 18, #reads = 1084997 mem = 536878358 peak = 921976832 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (58, 287405, 23, 68) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (130, 242, 381) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 883) [M::mem_pestat] mean and std.dev: (281.91, 175.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1134) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (154, 228, 328) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 676) [M::mem_pestat] mean and std.dev: (251.12, 122.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 850) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (511, 819, 2883) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7627) [M::mem_pestat] mean and std.dev: (1527.95, 1448.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9999) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (179, 311, 485) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1097) [M::mem_pestat] mean and std.dev: (333.83, 213.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1403) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 702774 sequences (100000233 bp) in 2.426 CPU sec, 2.559 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (73, 287189, 19, 48) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (142, 183, 391) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 889) [M::mem_pestat] mean and std.dev: (239.11, 169.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1138) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (155, 228, 328) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 674) [M::mem_pestat] mean and std.dev: (251.16, 122.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 847) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (84, 371, 770) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2142) [M::mem_pestat] mean and std.dev: (442.11, 349.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2828) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (207, 301, 496) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1074) [M::mem_pestat] mean and std.dev: (329.98, 189.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1363) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 702578 reads in 155.024 CPU sec, 4.918 real sec [M::process] read 702454 sequences (100000252 bp) in 1.810 CPU sec, 1.808 real sec... [M::mem_process_seqs] Processed 702012 reads in 104.723 CPU sec, 3.301 real sec sorting block 19, #reads = 1084383 mem = 536878892 peak = 924569600 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (61, 287217, 28, 66) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (180, 258, 468) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1044) [M::mem_pestat] mean and std.dev: (303.44, 184.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1332) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (154, 227, 326) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 670) [M::mem_pestat] mean and std.dev: (249.67, 122.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 842) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (244, 655, 855) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2077) [M::mem_pestat] mean and std.dev: (629.43, 404.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2688) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (185, 297, 411) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 863) [M::mem_pestat] mean and std.dev: (302.40, 173.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1089) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 702160 sequences (100000050 bp) in 2.762 CPU sec, 2.883 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (69, 287780, 22, 77) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (180, 305, 689) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1707) [M::mem_pestat] mean and std.dev: (369.83, 274.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2216) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (154, 227, 325) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 667) [M::mem_pestat] mean and std.dev: (249.25, 121.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 838) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (345, 1089, 3123) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 8679) [M::mem_pestat] mean and std.dev: (1473.60, 1596.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 11457) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (192, 270, 841) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2139) [M::mem_pestat] mean and std.dev: (426.19, 350.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2788) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 702426 sequences (100000150 bp) in 1.810 CPU sec, 1.809 real sec... [M::mem_process_seqs] Processed 702774 reads in 156.603 CPU sec, 4.953 real sec sorting block 20, #reads = 1082938 mem = 536879285 peak = 932073472 [M::mem_process_seqs] Processed 702454 reads in 102.716 CPU sec, 3.240 real sec sorting block 21, #reads = 1082311 mem = 536882632 peak = 997523456 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (75, 287532, 17, 62) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (180, 284, 720) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1800) [M::mem_pestat] mean and std.dev: (373.12, 336.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2340) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (155, 228, 327) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 671) [M::mem_pestat] mean and std.dev: (250.75, 121.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 843) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (190, 987, 2377) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6751) [M::mem_pestat] mean and std.dev: (1231.56, 1382.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8938) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (168, 267, 370) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 774) [M::mem_pestat] mean and std.dev: (274.63, 135.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 976) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 702152 sequences (100000220 bp) in 2.125 CPU sec, 2.240 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (51, 286941, 33, 56) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (171, 370, 880) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2298) [M::mem_pestat] mean and std.dev: (447.59, 430.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3007) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (154, 228, 328) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 676) [M::mem_pestat] mean and std.dev: (250.83, 122.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 850) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (216, 950, 1629) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4455) [M::mem_pestat] mean and std.dev: (976.60, 844.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5868) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (226, 280, 452) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 904) [M::mem_pestat] mean and std.dev: (293.24, 135.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1130) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 704994 sequences (100000162 bp) in 1.530 CPU sec, 1.527 real sec... [M::mem_process_seqs] Processed 702160 reads in 150.029 CPU sec, 4.771 real sec [M::mem_process_seqs] Processed 702426 reads in 98.988 CPU sec, 3.133 real sec sorting block 22, #reads = 1082612 mem = 536880519 peak = 997523456 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (56, 287766, 6, 44) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (186, 270, 401) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 831) [M::mem_pestat] mean and std.dev: (264.38, 135.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1046) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (155, 228, 329) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 677) [M::mem_pestat] mean and std.dev: (251.91, 123.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 851) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (195, 308, 846) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2148) [M::mem_pestat] mean and std.dev: (513.02, 493.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2799) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 707162 sequences (100000115 bp) in 2.545 CPU sec, 2.659 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (71, 288705, 34, 63) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (143, 232, 462) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1100) [M::mem_pestat] mean and std.dev: (264.74, 204.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1419) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (151, 221, 318) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 652) [M::mem_pestat] mean and std.dev: (243.98, 119.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 819) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (591, 1116, 1429) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3105) [M::mem_pestat] mean and std.dev: (1010.66, 569.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3943) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (176, 258, 711) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1781) [M::mem_pestat] mean and std.dev: (438.41, 398.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2316) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 705214 sequences (100000291 bp) in 1.500 CPU sec, 1.506 real sec... [M::mem_process_seqs] Processed 702152 reads in 155.285 CPU sec, 4.929 real sec [M::mem_process_seqs] Processed 704994 reads in 105.089 CPU sec, 3.334 real sec sorting block 23, #reads = 1082286 mem = 536878768 peak = 997523456 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (65, 289344, 25, 56) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (197, 320, 458) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 980) [M::mem_pestat] mean and std.dev: (303.84, 153.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1241) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (148, 216, 311) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 637) [M::mem_pestat] mean and std.dev: (238.74, 116.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 800) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (293, 503, 2335) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6419) [M::mem_pestat] mean and std.dev: (1474.56, 1615.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8461) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (186, 283, 494) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1110) [M::mem_pestat] mean and std.dev: (314.28, 182.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1418) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 704956 sequences (100000075 bp) in 2.118 CPU sec, 2.228 real sec... [M::process] read 704502 sequences (100000088 bp) in 1.490 CPU sec, 1.497 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (40, 288773, 21, 65) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (118, 204, 817) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2215) [M::mem_pestat] mean and std.dev: (369.76, 437.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2914) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (151, 221, 319) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 655) [M::mem_pestat] mean and std.dev: (244.33, 119.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 823) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (502, 1067, 2034) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5098) [M::mem_pestat] mean and std.dev: (1142.47, 886.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6630) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (159, 277, 588) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1446) [M::mem_pestat] mean and std.dev: (343.08, 249.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1875) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 707162 reads in 155.044 CPU sec, 5.163 real sec sorting block 24, #reads = 1083130 mem = 536877646 peak = 997523456 [M::mem_process_seqs] Processed 705214 reads in 100.774 CPU sec, 3.205 real sec sorting block 25, #reads = 1086739 mem = 536877728 peak = 1052200960 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (61, 288224, 30, 68) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (181, 423, 1389) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3805) [M::mem_pestat] mean and std.dev: (790.48, 825.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5013) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (151, 222, 321) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 661) [M::mem_pestat] mean and std.dev: (246.02, 121.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 831) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (403, 812, 1874) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4816) [M::mem_pestat] mean and std.dev: (1222.13, 989.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6287) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (274, 392, 544) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1084) [M::mem_pestat] mean and std.dev: (392.07, 197.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1354) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 704258 sequences (100000089 bp) in 2.104 CPU sec, 2.220 real sec... [M::process] read 704030 sequences (100000301 bp) in 1.420 CPU sec, 1.425 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (51, 288017, 23, 78) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (149, 274, 629) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1589) [M::mem_pestat] mean and std.dev: (380.70, 334.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2069) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (151, 223, 324) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 670) [M::mem_pestat] mean and std.dev: (247.29, 121.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 843) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (399, 739, 2232) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5898) [M::mem_pestat] mean and std.dev: (1178.27, 931.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7731) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (183, 271, 391) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 807) [M::mem_pestat] mean and std.dev: (285.81, 144.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1015) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 704956 reads in 153.754 CPU sec, 4.890 real sec [M::mem_process_seqs] Processed 704502 reads in 110.145 CPU sec, 3.513 real sec sorting block 26, #reads = 1084074 mem = 536881437 peak = 1052200960 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (64, 288676, 26, 54) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (202, 300, 499) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1093) [M::mem_pestat] mean and std.dev: (331.32, 193.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1390) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 224, 326) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 674) [M::mem_pestat] mean and std.dev: (248.68, 123.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 848) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (149, 566, 873) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2321) [M::mem_pestat] mean and std.dev: (683.42, 641.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3251) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (223, 312, 532) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1150) [M::mem_pestat] mean and std.dev: (339.63, 179.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1459) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 703686 sequences (100000080 bp) in 2.213 CPU sec, 2.330 real sec... [M::process] read 704550 sequences (100000292 bp) in 1.500 CPU sec, 1.502 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (36, 288582, 24, 72) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (154, 204, 338) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 706) [M::mem_pestat] mean and std.dev: (213.65, 87.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 890) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 224, 326) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 674) [M::mem_pestat] mean and std.dev: (249.07, 123.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 848) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (39, 275, 786) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2280) [M::mem_pestat] mean and std.dev: (482.25, 540.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3027) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (185, 328, 628) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1514) [M::mem_pestat] mean and std.dev: (345.52, 196.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1957) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 704258 reads in 153.342 CPU sec, 4.882 real sec [M::mem_process_seqs] Processed 704030 reads in 108.776 CPU sec, 3.471 real sec sorting block 27, #reads = 1084865 mem = 536886971 peak = 1052200960 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (73, 288282, 20, 59) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (162, 257, 858) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2250) [M::mem_pestat] mean and std.dev: (401.17, 367.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2946) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (153, 226, 329) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 681) [M::mem_pestat] mean and std.dev: (251.01, 124.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 857) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (1040, 1947, 2459) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5297) [M::mem_pestat] mean and std.dev: (1471.53, 845.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6716) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (191, 245, 409) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 845) [M::mem_pestat] mean and std.dev: (257.33, 137.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1063) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 703018 sequences (100000045 bp) in 2.210 CPU sec, 2.332 real sec... [M::process] read 702856 sequences (100000232 bp) in 1.510 CPU sec, 1.512 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (54, 288379, 24, 46) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (198, 366, 515) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1149) [M::mem_pestat] mean and std.dev: (341.86, 214.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1466) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (151, 222, 323) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 667) [M::mem_pestat] mean and std.dev: (246.95, 122.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 839) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (147, 809, 4367) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 12807) [M::mem_pestat] mean and std.dev: (1865.50, 2034.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 17027) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (172, 378, 534) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1258) [M::mem_pestat] mean and std.dev: (368.68, 282.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1620) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 703686 reads in 157.388 CPU sec, 5.007 real sec sorting block 28, #reads = 1085172 mem = 536885489 peak = 1052200960 [M::mem_process_seqs] Processed 704550 reads in 105.428 CPU sec, 3.347 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (45, 287828, 22, 47) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (241, 497, 961) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2401) [M::mem_pestat] mean and std.dev: (555.02, 410.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3121) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (153, 226, 328) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 678) [M::mem_pestat] mean and std.dev: (250.63, 124.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 853) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (122, 502, 1921) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5519) [M::mem_pestat] mean and std.dev: (1267.77, 1533.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7403) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (170, 296, 497) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1151) [M::mem_pestat] mean and std.dev: (306.14, 185.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1478) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 29, #reads = 1086157 mem = 536883581 peak = 1052200960 [M::process] read 702204 sequences (100000264 bp) in 2.214 CPU sec, 2.332 real sec... [M::process] read 702222 sequences (100000169 bp) in 1.430 CPU sec, 1.433 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (65, 288006, 17, 75) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (213, 328, 815) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2019) [M::mem_pestat] mean and std.dev: (478.62, 398.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2621) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (154, 227, 329) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 679) [M::mem_pestat] mean and std.dev: (251.18, 123.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 854) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (180, 520, 2328) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6624) [M::mem_pestat] mean and std.dev: (840.12, 901.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8772) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (211, 282, 545) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1213) [M::mem_pestat] mean and std.dev: (297.42, 143.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1547) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 703018 reads in 157.662 CPU sec, 5.249 real sec [M::mem_process_seqs] Processed 702856 reads in 101.435 CPU sec, 3.225 real sec sorting block 30, #reads = 1082957 mem = 536879467 peak = 1052200960 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (46, 287448, 9, 62) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (179, 255, 375) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 767) [M::mem_pestat] mean and std.dev: (253.66, 120.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 963) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (155, 229, 331) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 683) [M::mem_pestat] mean and std.dev: (252.89, 124.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 859) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (172, 262, 335) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 661) [M::mem_pestat] mean and std.dev: (244.71, 103.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 824) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 702388 sequences (100000104 bp) in 2.156 CPU sec, 2.272 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (73, 287558, 18, 57) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (138, 222, 349) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 771) [M::mem_pestat] mean and std.dev: (220.19, 121.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 982) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (155, 227, 328) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 674) [M::mem_pestat] mean and std.dev: (251.03, 122.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 847) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (197, 493, 696) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1694) [M::mem_pestat] mean and std.dev: (417.07, 310.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2193) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (213, 312, 511) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1107) [M::mem_pestat] mean and std.dev: (362.38, 235.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1405) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 702834 sequences (100000217 bp) in 1.840 CPU sec, 1.844 real sec... [M::mem_process_seqs] Processed 702204 reads in 154.174 CPU sec, 4.953 real sec [M::mem_process_seqs] Processed 702222 reads in 100.709 CPU sec, 3.266 real sec sorting block 31, #reads = 1083985 mem = 536882359 peak = 1052200960 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (66, 287525, 17, 66) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (158, 296, 531) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1277) [M::mem_pestat] mean and std.dev: (355.48, 236.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1650) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (154, 226, 325) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 667) [M::mem_pestat] mean and std.dev: (249.27, 121.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 838) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (218, 375, 1049) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2711) [M::mem_pestat] mean and std.dev: (403.60, 288.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3542) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (193, 288, 799) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2011) [M::mem_pestat] mean and std.dev: (412.34, 377.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2617) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 702348 sequences (100000062 bp) in 2.451 CPU sec, 2.563 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (58, 288111, 32, 54) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (189, 384, 601) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1425) [M::mem_pestat] mean and std.dev: (411.77, 326.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1837) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (153, 224, 324) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 666) [M::mem_pestat] mean and std.dev: (248.30, 121.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 837) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (349, 686, 1391) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3475) [M::mem_pestat] mean and std.dev: (803.30, 688.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4517) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (174, 258, 447) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 993) [M::mem_pestat] mean and std.dev: (288.19, 178.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1266) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 701802 sequences (100000079 bp) in 1.840 CPU sec, 1.832 real sec... [M::mem_process_seqs] Processed 702388 reads in 159.792 CPU sec, 5.149 real sec [M::mem_process_seqs] Processed 702834 reads in 104.494 CPU sec, 3.313 real sec sorting block 32, #reads = 1083263 mem = 536878905 peak = 1052200960 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (63, 288125, 17, 57) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (195, 289, 622) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1476) [M::mem_pestat] mean and std.dev: (320.43, 239.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1903) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (155, 228, 328) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 674) [M::mem_pestat] mean and std.dev: (250.82, 122.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 847) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (381, 735, 1569) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3945) [M::mem_pestat] mean and std.dev: (766.07, 646.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5133) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (193, 264, 587) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1375) [M::mem_pestat] mean and std.dev: (367.57, 302.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1769) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 702006 sequences (100000004 bp) in 2.452 CPU sec, 2.551 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (73, 287583, 23, 72) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (180, 299, 529) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1227) [M::mem_pestat] mean and std.dev: (332.64, 214.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1576) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (155, 229, 330) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 680) [M::mem_pestat] mean and std.dev: (252.21, 123.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 855) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (470, 1651, 4441) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 12383) [M::mem_pestat] mean and std.dev: (2066.09, 1884.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 16354) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (208, 307, 860) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2164) [M::mem_pestat] mean and std.dev: (451.47, 355.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2816) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 702348 reads in 155.705 CPU sec, 4.943 real sec [M::process] read 702226 sequences (100000148 bp) in 1.820 CPU sec, 1.820 real sec... sorting block 33, #reads = 1082375 mem = 536879123 peak = 1052200960 [M::mem_process_seqs] Processed 701802 reads in 105.277 CPU sec, 3.324 real sec sorting block 34, #reads = 1082690 mem = 536880337 peak = 1052200960 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (71, 287208, 22, 65) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (172, 280, 357) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 727) [M::mem_pestat] mean and std.dev: (239.31, 99.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 912) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (155, 229, 330) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 680) [M::mem_pestat] mean and std.dev: (252.38, 124.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 855) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (237, 526, 997) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2517) [M::mem_pestat] mean and std.dev: (766.19, 707.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3595) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (204, 277, 376) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 720) [M::mem_pestat] mean and std.dev: (264.76, 106.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 892) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 707724 sequences (100000114 bp) in 2.419 CPU sec, 2.515 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (54, 287555, 23, 81) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (144, 265, 395) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 897) [M::mem_pestat] mean and std.dev: (279.25, 172.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1148) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (155, 228, 332) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 686) [M::mem_pestat] mean and std.dev: (252.96, 125.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 863) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (710, 822, 1339) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2597) [M::mem_pestat] mean and std.dev: (840.24, 447.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3226) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (190, 244, 737) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1831) [M::mem_pestat] mean and std.dev: (387.71, 365.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2378) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 706424 sequences (100000094 bp) in 1.820 CPU sec, 1.816 real sec... [M::mem_process_seqs] Processed 702006 reads in 163.064 CPU sec, 5.174 real sec [M::mem_process_seqs] Processed 702226 reads in 111.025 CPU sec, 3.512 real sec sorting block 35, #reads = 1081451 mem = 536878911 peak = 1052200960 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (70, 288821, 20, 39) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (158, 269, 623) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1553) [M::mem_pestat] mean and std.dev: (334.26, 262.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2018) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (147, 213, 306) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 624) [M::mem_pestat] mean and std.dev: (235.77, 114.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 783) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (731, 1022, 1492) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3014) [M::mem_pestat] mean and std.dev: (952.21, 554.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3775) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (191, 307, 566) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1316) [M::mem_pestat] mean and std.dev: (377.83, 286.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1691) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 704778 sequences (100000021 bp) in 2.469 CPU sec, 2.561 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (54, 288679, 16, 56) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (131, 244, 667) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1739) [M::mem_pestat] mean and std.dev: (350.57, 342.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2275) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (149, 218, 315) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 647) [M::mem_pestat] mean and std.dev: (241.48, 118.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 813) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (326, 565, 2681) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7391) [M::mem_pestat] mean and std.dev: (1533.06, 1780.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9746) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (205, 320, 552) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1246) [M::mem_pestat] mean and std.dev: (356.52, 251.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1593) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 704536 sequences (100000161 bp) in 1.800 CPU sec, 1.800 real sec... [M::mem_process_seqs] Processed 707724 reads in 157.613 CPU sec, 5.240 real sec [M::mem_process_seqs] Processed 706424 reads in 99.244 CPU sec, 3.227 real sec sorting block 36, #reads = 1080552 mem = 536880878 peak = 1052200960 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (79, 288996, 13, 55) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (156, 269, 541) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1311) [M::mem_pestat] mean and std.dev: (310.85, 193.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1696) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (151, 222, 321) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 661) [M::mem_pestat] mean and std.dev: (246.13, 121.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 831) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (360, 531, 894) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1962) [M::mem_pestat] mean and std.dev: (619.08, 376.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2496) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (174, 288, 453) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1011) [M::mem_pestat] mean and std.dev: (287.45, 162.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1290) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 703776 sequences (100000203 bp) in 2.202 CPU sec, 2.299 real sec... [M::process] read 703372 sequences (100000032 bp) in 1.410 CPU sec, 1.413 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (75, 288831, 24, 57) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (161, 272, 401) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 881) [M::mem_pestat] mean and std.dev: (279.79, 148.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1121) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 223, 324) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 668) [M::mem_pestat] mean and std.dev: (247.67, 122.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 840) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (442, 1084, 1863) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4705) [M::mem_pestat] mean and std.dev: (1160.74, 1151.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6126) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (182, 229, 689) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1703) [M::mem_pestat] mean and std.dev: (375.67, 390.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2210) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 704778 reads in 151.848 CPU sec, 4.910 real sec sorting block 37, #reads = 1086638 mem = 536877179 peak = 1052200960 [M::mem_process_seqs] Processed 704536 reads in 97.367 CPU sec, 3.088 real sec sorting block 38, #reads = 1087527 mem = 536881510 peak = 1068457984 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (55, 288170, 17, 47) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (219, 288, 582) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1308) [M::mem_pestat] mean and std.dev: (338.19, 242.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1671) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (153, 225, 327) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 675) [M::mem_pestat] mean and std.dev: (249.56, 123.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 849) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (128, 777, 1477) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4175) [M::mem_pestat] mean and std.dev: (978.18, 885.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5524) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (171, 280, 368) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 762) [M::mem_pestat] mean and std.dev: (260.60, 124.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 959) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 703436 sequences (100000019 bp) in 2.250 CPU sec, 2.348 real sec... [M::process] read 703124 sequences (100000098 bp) in 1.440 CPU sec, 1.441 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (41, 287896, 31, 64) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (160, 336, 1879) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5317) [M::mem_pestat] mean and std.dev: (1137.29, 1501.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7142) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (153, 225, 328) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 678) [M::mem_pestat] mean and std.dev: (250.67, 124.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 853) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (189, 368, 927) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2403) [M::mem_pestat] mean and std.dev: (412.96, 343.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3141) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (186, 278, 450) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 978) [M::mem_pestat] mean and std.dev: (307.67, 165.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1242) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 703776 reads in 156.488 CPU sec, 5.063 real sec [M::mem_process_seqs] Processed 703372 reads in 102.354 CPU sec, 3.248 real sec sorting block 39, #reads = 1084155 mem = 536879886 peak = 1068457984 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (65, 288398, 24, 66) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (173, 248, 500) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1154) [M::mem_pestat] mean and std.dev: (320.05, 259.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1481) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (153, 226, 329) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 681) [M::mem_pestat] mean and std.dev: (251.06, 124.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 857) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (707, 1085, 2466) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5984) [M::mem_pestat] mean and std.dev: (1714.96, 1979.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9631) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (197, 248, 362) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 692) [M::mem_pestat] mean and std.dev: (254.67, 128.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 857) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 703754 sequences (100000016 bp) in 2.189 CPU sec, 2.273 real sec... [M::process] read 702430 sequences (100000281 bp) in 1.400 CPU sec, 1.403 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (59, 287736, 24, 49) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (196, 274, 625) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1483) [M::mem_pestat] mean and std.dev: (386.84, 284.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1912) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (153, 226, 329) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 681) [M::mem_pestat] mean and std.dev: (250.81, 124.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 857) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (170, 445, 2399) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6857) [M::mem_pestat] mean and std.dev: (1241.29, 1686.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9086) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (198, 256, 423) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 873) [M::mem_pestat] mean and std.dev: (267.36, 135.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1098) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 703436 reads in 157.847 CPU sec, 5.066 real sec [M::mem_process_seqs] Processed 703124 reads in 104.173 CPU sec, 3.328 real sec sorting block 40, #reads = 1086536 mem = 536878808 peak = 1068457984 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (62, 288473, 20, 51) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (168, 260, 543) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1293) [M::mem_pestat] mean and std.dev: (324.36, 235.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1668) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (153, 224, 325) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 669) [M::mem_pestat] mean and std.dev: (248.79, 123.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 841) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (184, 552, 908) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2356) [M::mem_pestat] mean and std.dev: (648.95, 580.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3080) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (173, 241, 517) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1205) [M::mem_pestat] mean and std.dev: (368.53, 280.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1549) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 701758 sequences (100000130 bp) in 2.450 CPU sec, 2.529 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (67, 288129, 36, 42) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (168, 258, 387) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 825) [M::mem_pestat] mean and std.dev: (255.76, 119.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1044) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (154, 228, 332) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 688) [M::mem_pestat] mean and std.dev: (253.17, 125.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 866) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (243, 967, 5422) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 15780) [M::mem_pestat] mean and std.dev: (2119.64, 2412.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 20959) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (227, 326, 769) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1853) [M::mem_pestat] mean and std.dev: (427.79, 314.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2395) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 701600 sequences (100000132 bp) in 1.998 CPU sec, 2.001 real sec... [M::mem_process_seqs] Processed 703754 reads in 156.154 CPU sec, 4.941 real sec sorting block 41, #reads = 1084727 mem = 536879374 peak = 1068457984 [M::mem_process_seqs] Processed 702430 reads in 103.914 CPU sec, 3.516 real sec sorting block 42, #reads = 1084118 mem = 536878493 peak = 1068457984 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (62, 287408, 12, 66) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (163, 362, 767) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1975) [M::mem_pestat] mean and std.dev: (476.98, 414.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2579) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (156, 229, 329) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 675) [M::mem_pestat] mean and std.dev: (251.76, 122.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 848) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (567, 726, 1422) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3132) [M::mem_pestat] mean and std.dev: (742.55, 525.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3987) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (199, 295, 514) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1144) [M::mem_pestat] mean and std.dev: (310.70, 184.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1459) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 701618 sequences (100000028 bp) in 2.215 CPU sec, 2.335 real sec... [M::process] read 701624 sequences (100000130 bp) in 1.420 CPU sec, 1.419 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (56, 287428, 20, 77) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (202, 447, 747) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1837) [M::mem_pestat] mean and std.dev: (478.69, 343.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2382) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (155, 229, 328) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 674) [M::mem_pestat] mean and std.dev: (251.30, 121.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 847) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (147, 1078, 1529) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4293) [M::mem_pestat] mean and std.dev: (871.06, 950.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5675) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (197, 393, 691) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1679) [M::mem_pestat] mean and std.dev: (371.17, 241.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2173) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 701758 reads in 155.220 CPU sec, 5.183 real sec [M::mem_process_seqs] Processed 701600 reads in 101.160 CPU sec, 3.267 real sec sorting block 43, #reads = 1082198 mem = 536882821 peak = 1068457984 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (64, 286856, 28, 58) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (165, 239, 779) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2007) [M::mem_pestat] mean and std.dev: (445.83, 502.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2621) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (155, 228, 328) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 674) [M::mem_pestat] mean and std.dev: (251.14, 121.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 847) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (304, 854, 2681) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7435) [M::mem_pestat] mean and std.dev: (1324.61, 1420.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9812) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (219, 389, 759) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1839) [M::mem_pestat] mean and std.dev: (457.85, 414.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2379) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 701878 sequences (100000032 bp) in 2.480 CPU sec, 2.542 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (76, 287253, 19, 63) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (205, 311, 461) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 973) [M::mem_pestat] mean and std.dev: (370.65, 237.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1321) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (155, 228, 328) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 674) [M::mem_pestat] mean and std.dev: (251.16, 122.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 847) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (545, 644, 1263) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2699) [M::mem_pestat] mean and std.dev: (800.83, 440.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3417) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (198, 288, 456) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 972) [M::mem_pestat] mean and std.dev: (331.62, 177.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1230) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 701686 sequences (100000223 bp) in 1.810 CPU sec, 1.803 real sec... [M::mem_process_seqs] Processed 701618 reads in 159.728 CPU sec, 5.108 real sec [M::mem_process_seqs] Processed 701624 reads in 103.115 CPU sec, 3.256 real sec sorting block 44, #reads = 1081748 mem = 536880491 peak = 1068457984 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (68, 287283, 17, 41) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (167, 224, 345) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 701) [M::mem_pestat] mean and std.dev: (218.11, 121.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 879) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (155, 228, 328) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 674) [M::mem_pestat] mean and std.dev: (251.13, 122.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 847) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (139, 538, 2976) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 8650) [M::mem_pestat] mean and std.dev: (1359.53, 1777.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 11487) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (145, 274, 646) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1648) [M::mem_pestat] mean and std.dev: (259.85, 158.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2149) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 701738 sequences (100000098 bp) in 2.371 CPU sec, 2.458 real sec... [M::process] read 701680 sequences (100000157 bp) in 1.480 CPU sec, 1.475 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (57, 287012, 17, 49) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (207, 361, 667) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1587) [M::mem_pestat] mean and std.dev: (433.22, 328.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2047) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (155, 228, 328) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 674) [M::mem_pestat] mean and std.dev: (251.47, 122.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 847) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (130, 428, 531) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1333) [M::mem_pestat] mean and std.dev: (344.69, 245.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1734) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (215, 281, 1263) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3359) [M::mem_pestat] mean and std.dev: (624.15, 659.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4407) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 701878 reads in 155.632 CPU sec, 4.945 real sec sorting block 45, #reads = 1082216 mem = 536877789 peak = 1068457984 [M::mem_process_seqs] Processed 701686 reads in 103.438 CPU sec, 3.278 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (58, 287117, 23, 72) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (179, 304, 510) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1172) [M::mem_pestat] mean and std.dev: (309.62, 188.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1503) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (156, 230, 332) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 684) [M::mem_pestat] mean and std.dev: (253.47, 124.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 860) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (463, 747, 823) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1543) [M::mem_pestat] mean and std.dev: (596.84, 279.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1903) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (170, 241, 361) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 743) [M::mem_pestat] mean and std.dev: (232.80, 99.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 934) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 46, #reads = 1083384 mem = 536881636 peak = 1095802880 [M::process] read 704850 sequences (100000236 bp) in 2.356 CPU sec, 2.418 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (68, 287375, 18, 75) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (138, 225, 446) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1062) [M::mem_pestat] mean and std.dev: (274.15, 192.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1370) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (155, 230, 332) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 686) [M::mem_pestat] mean and std.dev: (253.75, 125.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 863) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (685, 1201, 1310) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2560) [M::mem_pestat] mean and std.dev: (907.20, 377.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3185) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (170, 237, 349) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 707) [M::mem_pestat] mean and std.dev: (238.65, 114.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 886) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 710514 sequences (100000093 bp) in 1.890 CPU sec, 1.886 real sec... [M::mem_process_seqs] Processed 701738 reads in 156.984 CPU sec, 4.975 real sec [M::mem_process_seqs] Processed 701680 reads in 105.755 CPU sec, 3.336 real sec sorting block 47, #reads = 1082666 mem = 536880261 peak = 1095802880 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (68, 288102, 24, 88) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (153, 239, 398) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 888) [M::mem_pestat] mean and std.dev: (235.45, 131.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1133) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (151, 221, 320) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 658) [M::mem_pestat] mean and std.dev: (245.20, 121.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 827) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (438, 816, 995) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2109) [M::mem_pestat] mean and std.dev: (743.18, 438.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2666) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (188, 314, 424) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 896) [M::mem_pestat] mean and std.dev: (297.16, 146.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1132) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 709530 sequences (100000139 bp) in 2.215 CPU sec, 2.293 real sec... [M::process] read 708600 sequences (100000147 bp) in 1.460 CPU sec, 1.465 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (86, 289916, 12, 61) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (162, 261, 486) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1134) [M::mem_pestat] mean and std.dev: (317.19, 231.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1458) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (144, 207, 297) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 603) [M::mem_pestat] mean and std.dev: (229.30, 111.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 756) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (117, 392, 899) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2463) [M::mem_pestat] mean and std.dev: (498.91, 533.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3245) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (180, 256, 495) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1125) [M::mem_pestat] mean and std.dev: (331.11, 254.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1440) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 704850 reads in 170.025 CPU sec, 5.415 real sec [M::mem_process_seqs] Processed 710514 reads in 114.667 CPU sec, 3.652 real sec sorting block 48, #reads = 1080671 mem = 536878799 peak = 1095802880 [M::process] read 707576 sequences (100000011 bp) in 2.553 CPU sec, 2.604 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (54, 290230, 24, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (163, 262, 587) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1435) [M::mem_pestat] mean and std.dev: (377.12, 300.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1859) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (146, 212, 307) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 629) [M::mem_pestat] mean and std.dev: (236.41, 116.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 790) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (23, 123, 327) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 935) [M::mem_pestat] mean and std.dev: (143.73, 127.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1239) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (197, 280, 771) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1919) [M::mem_pestat] mean and std.dev: (367.75, 323.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2493) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 707284 sequences (100000158 bp) in 1.910 CPU sec, 1.914 real sec... [M::mem_process_seqs] Processed 708600 reads in 91.012 CPU sec, 2.861 real sec sorting block 49, #reads = 1084570 mem = 536884146 peak = 1095802880 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (53, 290454, 27, 73) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (149, 273, 414) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 944) [M::mem_pestat] mean and std.dev: (288.10, 181.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1209) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (145, 210, 304) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 622) [M::mem_pestat] mean and std.dev: (234.27, 115.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 781) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (457, 547, 829) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1573) [M::mem_pestat] mean and std.dev: (504.74, 284.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1945) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (169, 264, 400) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 862) [M::mem_pestat] mean and std.dev: (284.45, 160.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1093) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (65, 290159, 28, 42) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (158, 263, 685) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1739) [M::mem_pestat] mean and std.dev: (462.84, 417.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2266) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (147, 216, 314) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 648) [M::mem_pestat] mean and std.dev: (240.50, 119.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 815) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (241, 947, 1557) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4189) [M::mem_pestat] mean and std.dev: (712.38, 543.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5505) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (165, 273, 419) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 927) [M::mem_pestat] mean and std.dev: (314.83, 195.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1181) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 709530 reads in 251.015 CPU sec, 7.960 real sec [M::process] read 706556 sequences (100000258 bp) in 1.998 CPU sec, 2.026 real sec... [M::mem_process_seqs] Processed 707576 reads in 126.280 CPU sec, 4.032 real sec sorting block 50, #reads = 1086150 mem = 536880432 peak = 1095802880 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (51, 290387, 36, 46) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (218, 326, 679) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1601) [M::mem_pestat] mean and std.dev: (414.62, 363.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2062) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (148, 216, 315) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 649) [M::mem_pestat] mean and std.dev: (241.31, 119.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 816) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (695, 1145, 1426) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2888) [M::mem_pestat] mean and std.dev: (1013.09, 595.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3619) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (194, 374, 817) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2063) [M::mem_pestat] mean and std.dev: (477.86, 426.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2686) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 706470 sequences (100000281 bp) in 2.148 CPU sec, 2.250 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (61, 289718, 27, 45) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (144, 239, 405) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 927) [M::mem_pestat] mean and std.dev: (293.49, 219.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1188) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (148, 217, 317) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 655) [M::mem_pestat] mean and std.dev: (242.89, 121.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 824) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (270, 929, 2395) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6645) [M::mem_pestat] mean and std.dev: (1028.09, 909.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8770) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (172, 211, 485) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1111) [M::mem_pestat] mean and std.dev: (262.62, 166.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1424) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 706620 sequences (100000020 bp) in 1.860 CPU sec, 1.863 real sec... [M::mem_process_seqs] Processed 707284 reads in 155.371 CPU sec, 4.937 real sec [M::mem_process_seqs] Processed 706556 reads in 101.311 CPU sec, 3.200 real sec sorting block 51, #reads = 1087289 mem = 536877512 peak = 1095802880 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (53, 289968, 15, 59) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (155, 250, 481) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1133) [M::mem_pestat] mean and std.dev: (295.42, 201.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1459) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (149, 218, 318) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 656) [M::mem_pestat] mean and std.dev: (243.51, 121.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 825) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (638, 747, 1904) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4436) [M::mem_pestat] mean and std.dev: (1090.36, 999.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5702) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (155, 219, 359) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 767) [M::mem_pestat] mean and std.dev: (218.78, 99.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 971) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 706052 sequences (100000019 bp) in 2.248 CPU sec, 2.411 real sec... [M::process] read 706240 sequences (100000075 bp) in 1.440 CPU sec, 1.441 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (42, 289588, 24, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (208, 278, 516) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1132) [M::mem_pestat] mean and std.dev: (362.02, 229.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1440) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (149, 218, 319) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 659) [M::mem_pestat] mean and std.dev: (243.97, 121.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 829) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (224, 644, 1393) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3731) [M::mem_pestat] mean and std.dev: (882.39, 768.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4900) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (184, 279, 392) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 808) [M::mem_pestat] mean and std.dev: (271.19, 119.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1016) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 706470 reads in 157.935 CPU sec, 5.059 real sec sorting block 52, #reads = 1087030 mem = 536879407 peak = 1095802880 [M::mem_process_seqs] Processed 706620 reads in 100.785 CPU sec, 3.212 real sec sorting block 53, #reads = 1086570 mem = 536879181 peak = 1129734144 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (61, 289573, 21, 57) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (182, 257, 413) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 875) [M::mem_pestat] mean and std.dev: (282.71, 139.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1106) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (149, 218, 318) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 656) [M::mem_pestat] mean and std.dev: (243.97, 121.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 825) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (236, 610, 1758) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4802) [M::mem_pestat] mean and std.dev: (798.14, 691.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6324) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (194, 243, 1166) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3110) [M::mem_pestat] mean and std.dev: (669.62, 808.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4082) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 705904 sequences (100000001 bp) in 2.148 CPU sec, 2.280 real sec... [M::process] read 705256 sequences (100000076 bp) in 1.460 CPU sec, 1.465 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (62, 289833, 24, 69) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (231, 374, 817) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1989) [M::mem_pestat] mean and std.dev: (505.89, 403.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2575) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (149, 218, 319) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 659) [M::mem_pestat] mean and std.dev: (243.79, 121.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 829) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (436, 607, 1399) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3325) [M::mem_pestat] mean and std.dev: (961.54, 825.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4288) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (159, 288, 471) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1095) [M::mem_pestat] mean and std.dev: (329.26, 235.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1407) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 706052 reads in 160.869 CPU sec, 5.142 real sec [M::mem_process_seqs] Processed 706240 reads in 102.819 CPU sec, 3.351 real sec sorting block 54, #reads = 1084886 mem = 536878491 peak = 1129734144 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (77, 289581, 7, 69) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (151, 211, 413) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 937) [M::mem_pestat] mean and std.dev: (232.15, 121.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1199) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (150, 219, 319) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 657) [M::mem_pestat] mean and std.dev: (244.56, 121.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 826) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (183, 208, 319) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 591) [M::mem_pestat] mean and std.dev: (228.16, 91.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 727) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 704482 sequences (100000068 bp) in 2.114 CPU sec, 2.231 real sec... [M::process] read 704062 sequences (100000158 bp) in 1.440 CPU sec, 1.445 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (58, 289455, 23, 56) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (125, 213, 445) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1085) [M::mem_pestat] mean and std.dev: (265.65, 187.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1405) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (150, 221, 322) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 666) [M::mem_pestat] mean and std.dev: (245.99, 122.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 838) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (314, 812, 1982) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5318) [M::mem_pestat] mean and std.dev: (972.35, 939.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6986) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (160, 257, 512) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1216) [M::mem_pestat] mean and std.dev: (293.12, 197.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1568) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 705904 reads in 161.683 CPU sec, 5.225 real sec [M::mem_process_seqs] Processed 705256 reads in 102.576 CPU sec, 3.257 real sec sorting block 55, #reads = 1084245 mem = 536881762 peak = 1129734144 [M::process] read 703136 sequences (100000187 bp) in 2.233 CPU sec, 2.328 real sec... [M::process] read 703100 sequences (100000060 bp) in 1.430 CPU sec, 1.428 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (60, 287922, 29, 62) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (149, 263, 623) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1571) [M::mem_pestat] mean and std.dev: (296.44, 271.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2045) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 224, 323) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 665) [M::mem_pestat] mean and std.dev: (247.76, 121.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 836) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (136, 420, 1079) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2965) [M::mem_pestat] mean and std.dev: (627.21, 584.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3908) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (166, 308, 549) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1315) [M::mem_pestat] mean and std.dev: (362.97, 220.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1698) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 704062 reads in 84.933 CPU sec, 2.719 real sec sorting block 56, #reads = 1083891 mem = 536879251 peak = 1129734144 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (55, 288586, 20, 63) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (198, 266, 477) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1035) [M::mem_pestat] mean and std.dev: (308.82, 166.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1314) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (151, 222, 322) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 664) [M::mem_pestat] mean and std.dev: (246.48, 121.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 835) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (321, 519, 2107) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5679) [M::mem_pestat] mean and std.dev: (959.32, 843.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7465) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (217, 268, 598) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1360) [M::mem_pestat] mean and std.dev: (329.80, 205.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1741) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (44, 287998, 19, 69) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (162, 211, 343) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 705) [M::mem_pestat] mean and std.dev: (224.74, 115.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 886) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (153, 225, 326) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 672) [M::mem_pestat] mean and std.dev: (249.22, 122.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 845) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (415, 1201, 1597) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3961) [M::mem_pestat] mean and std.dev: (850.62, 657.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5143) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (221, 335, 686) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1616) [M::mem_pestat] mean and std.dev: (435.05, 347.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2081) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 703190 sequences (100000077 bp) in 1.656 CPU sec, 1.662 real sec... [M::mem_process_seqs] Processed 704482 reads in 245.930 CPU sec, 7.846 real sec [M::mem_process_seqs] Processed 703136 reads in 123.264 CPU sec, 4.049 real sec sorting block 57, #reads = 1081346 mem = 536877719 peak = 1153581056 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (81, 287540, 28, 75) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (189, 282, 361) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 705) [M::mem_pestat] mean and std.dev: (254.01, 92.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 877) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (154, 227, 328) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 676) [M::mem_pestat] mean and std.dev: (250.57, 123.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 850) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (279, 449, 729) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1629) [M::mem_pestat] mean and std.dev: (424.16, 224.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2079) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (173, 282, 522) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1220) [M::mem_pestat] mean and std.dev: (325.54, 207.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1569) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 710120 sequences (100000077 bp) in 2.375 CPU sec, 2.526 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (60, 287941, 26, 53) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (160, 215, 416) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 928) [M::mem_pestat] mean and std.dev: (254.92, 161.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1184) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (153, 226, 327) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 675) [M::mem_pestat] mean and std.dev: (250.34, 124.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 849) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (222, 1064, 3405) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 9771) [M::mem_pestat] mean and std.dev: (1780.35, 1926.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 12954) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (174, 251, 577) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1383) [M::mem_pestat] mean and std.dev: (354.53, 283.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1786) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 715704 sequences (100000014 bp) in 1.910 CPU sec, 1.905 real sec... [M::mem_process_seqs] Processed 703100 reads in 165.259 CPU sec, 5.329 real sec sorting block 58, #reads = 1080306 mem = 536878993 peak = 1153581056 [M::mem_process_seqs] Processed 703190 reads in 108.109 CPU sec, 3.427 real sec sorting block 59, #reads = 1080769 mem = 536878181 peak = 1153581056 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (66, 289523, 17, 72) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (130, 254, 411) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 973) [M::mem_pestat] mean and std.dev: (259.82, 146.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1254) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (144, 209, 300) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 612) [M::mem_pestat] mean and std.dev: (231.76, 113.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 768) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (96, 467, 1857) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5379) [M::mem_pestat] mean and std.dev: (924.35, 1023.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7140) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (184, 265, 905) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2347) [M::mem_pestat] mean and std.dev: (424.58, 459.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3068) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 713614 sequences (100000135 bp) in 2.420 CPU sec, 2.534 real sec... [M::process] read 712430 sequences (100000150 bp) in 1.500 CPU sec, 1.502 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (43, 291304, 21, 44) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (153, 266, 325) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 669) [M::mem_pestat] mean and std.dev: (249.68, 123.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 841) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (139, 198, 283) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 571) [M::mem_pestat] mean and std.dev: (219.51, 105.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 715) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (82, 224, 965) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2731) [M::mem_pestat] mean and std.dev: (504.57, 515.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3614) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (184, 337, 414) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 874) [M::mem_pestat] mean and std.dev: (283.16, 117.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1104) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 710120 reads in 189.697 CPU sec, 6.043 real sec [M::mem_process_seqs] Processed 715704 reads in 129.574 CPU sec, 4.125 real sec sorting block 60, #reads = 1077695 mem = 536878203 peak = 1153581056 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (69, 292022, 22, 46) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (150, 198, 455) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1065) [M::mem_pestat] mean and std.dev: (257.34, 205.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1370) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (141, 201, 289) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 585) [M::mem_pestat] mean and std.dev: (224.35, 108.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 733) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (285, 752, 1053) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2589) [M::mem_pestat] mean and std.dev: (724.95, 583.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3357) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (162, 282, 484) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1128) [M::mem_pestat] mean and std.dev: (315.33, 180.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1450) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 710554 sequences (100000227 bp) in 2.800 CPU sec, 2.903 real sec... [M::process] read 709262 sequences (100000029 bp) in 1.710 CPU sec, 1.711 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (56, 291775, 19, 36) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (161, 232, 464) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1070) [M::mem_pestat] mean and std.dev: (307.06, 203.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1373) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (142, 205, 295) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 601) [M::mem_pestat] mean and std.dev: (228.05, 111.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 754) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (565, 795, 2834) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7372) [M::mem_pestat] mean and std.dev: (1654.37, 1749.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9641) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (142, 244, 603) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1525) [M::mem_pestat] mean and std.dev: (328.94, 285.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1986) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 713614 reads in 180.849 CPU sec, 5.734 real sec [M::mem_process_seqs] Processed 712430 reads in 120.373 CPU sec, 3.826 real sec sorting block 61, #reads = 1079119 mem = 536877848 peak = 1153581056 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (57, 290848, 22, 61) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (172, 266, 546) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1294) [M::mem_pestat] mean and std.dev: (399.02, 334.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1738) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (144, 208, 301) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 615) [M::mem_pestat] mean and std.dev: (232.00, 113.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 772) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (273, 475, 1545) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4089) [M::mem_pestat] mean and std.dev: (871.40, 798.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5361) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (215, 273, 407) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 791) [M::mem_pestat] mean and std.dev: (288.39, 110.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 983) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 708286 sequences (100000048 bp) in 2.416 CPU sec, 2.512 real sec... [M::process] read 707830 sequences (100000082 bp) in 1.800 CPU sec, 1.799 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (63, 290372, 26, 57) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (151, 264, 416) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 946) [M::mem_pestat] mean and std.dev: (266.00, 185.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1211) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (145, 211, 306) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 628) [M::mem_pestat] mean and std.dev: (235.64, 116.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 789) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (458, 708, 1321) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3047) [M::mem_pestat] mean and std.dev: (810.17, 633.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3910) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (176, 289, 504) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1160) [M::mem_pestat] mean and std.dev: (287.57, 172.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1488) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 710554 reads in 176.157 CPU sec, 5.589 real sec sorting block 62, #reads = 1080232 mem = 536877146 peak = 1153581056 [M::mem_process_seqs] Processed 709262 reads in 116.445 CPU sec, 3.699 real sec sorting block 63, #reads = 1082546 mem = 536879971 peak = 1153581056 [M::process] read 707204 sequences (100000189 bp) in 2.193 CPU sec, 2.256 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (51, 290477, 15, 56) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (145, 214, 389) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 877) [M::mem_pestat] mean and std.dev: (230.77, 119.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1121) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (146, 213, 308) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 632) [M::mem_pestat] mean and std.dev: (237.08, 116.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 794) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (450, 658, 982) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2046) [M::mem_pestat] mean and std.dev: (523.77, 367.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2578) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (177, 285, 480) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1086) [M::mem_pestat] mean and std.dev: (294.57, 141.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1389) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 708286 reads in 98.029 CPU sec, 3.419 real sec [M::process] read 707390 sequences (100000150 bp) in 2.218 CPU sec, 2.438 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (68, 290181, 14, 82) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (159, 217, 360) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 762) [M::mem_pestat] mean and std.dev: (229.18, 122.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 963) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (147, 214, 311) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 639) [M::mem_pestat] mean and std.dev: (238.89, 117.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 803) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (537, 1191, 2286) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5784) [M::mem_pestat] mean and std.dev: (1145.25, 913.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7533) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (186, 359, 1073) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2847) [M::mem_pestat] mean and std.dev: (639.39, 792.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3807) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 706754 sequences (100000024 bp) in 1.999 CPU sec, 1.999 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (64, 290207, 25, 42) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (167, 234, 475) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1091) [M::mem_pestat] mean and std.dev: (318.84, 252.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1399) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (148, 215, 312) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 640) [M::mem_pestat] mean and std.dev: (239.92, 118.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 804) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (180, 491, 2242) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6366) [M::mem_pestat] mean and std.dev: (1222.16, 1283.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8428) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (191, 330, 742) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1844) [M::mem_pestat] mean and std.dev: (400.94, 350.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2395) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 707830 reads in 189.815 CPU sec, 6.048 real sec sorting block 64, #reads = 1082243 mem = 536879191 peak = 1153581056 [M::mem_process_seqs] Processed 707204 reads in 207.579 CPU sec, 6.632 real sec sorting block 65, #reads = 1082359 mem = 536881451 peak = 1153581056 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (43, 289984, 19, 59) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (175, 273, 510) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1180) [M::mem_pestat] mean and std.dev: (264.97, 134.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1515) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (148, 215, 312) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 640) [M::mem_pestat] mean and std.dev: (239.42, 117.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 804) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (373, 556, 908) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1978) [M::mem_pestat] mean and std.dev: (501.75, 315.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2513) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (177, 292, 510) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1176) [M::mem_pestat] mean and std.dev: (329.15, 235.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1509) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 705916 sequences (100000076 bp) in 2.246 CPU sec, 2.383 real sec... [M::process] read 705304 sequences (100000204 bp) in 1.870 CPU sec, 1.870 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (52, 289925, 19, 57) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (198, 265, 620) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1464) [M::mem_pestat] mean and std.dev: (305.05, 179.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1886) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (148, 217, 315) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 649) [M::mem_pestat] mean and std.dev: (241.90, 120.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 816) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (259, 1668, 4834) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 13984) [M::mem_pestat] mean and std.dev: (2210.95, 2054.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 18559) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (156, 243, 374) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 810) [M::mem_pestat] mean and std.dev: (265.94, 129.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1028) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 707390 reads in 165.878 CPU sec, 5.258 real sec [M::mem_process_seqs] Processed 706754 reads in 110.117 CPU sec, 3.495 real sec sorting block 66, #reads = 1083666 mem = 536882209 peak = 1153581056 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (60, 288958, 15, 70) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (191, 375, 503) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1127) [M::mem_pestat] mean and std.dev: (407.52, 260.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1450) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (149, 218, 319) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 659) [M::mem_pestat] mean and std.dev: (244.30, 122.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 829) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (316, 580, 1512) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3904) [M::mem_pestat] mean and std.dev: (600.00, 420.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5100) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (194, 283, 490) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1082) [M::mem_pestat] mean and std.dev: (303.63, 179.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1378) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 704476 sequences (100000128 bp) in 2.400 CPU sec, 2.506 real sec... [M::process] read 704060 sequences (100000243 bp) in 1.890 CPU sec, 1.885 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (57, 289221, 14, 44) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (179, 284, 552) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1298) [M::mem_pestat] mean and std.dev: (324.84, 230.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1671) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (150, 219, 319) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 657) [M::mem_pestat] mean and std.dev: (244.59, 121.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 826) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (513, 1223, 2034) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5076) [M::mem_pestat] mean and std.dev: (1165.14, 771.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6597) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (180, 271, 556) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1308) [M::mem_pestat] mean and std.dev: (338.60, 271.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1684) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 705916 reads in 168.086 CPU sec, 5.400 real sec [M::mem_process_seqs] Processed 705304 reads in 111.897 CPU sec, 3.543 real sec sorting block 67, #reads = 1083861 mem = 536879766 peak = 1153581056 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (54, 288709, 14, 72) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (126, 199, 277) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 579) [M::mem_pestat] mean and std.dev: (210.20, 108.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 730) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (151, 221, 322) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 664) [M::mem_pestat] mean and std.dev: (246.63, 122.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 835) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (98, 128, 735) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2009) [M::mem_pestat] mean and std.dev: (414.54, 505.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2646) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (209, 317, 428) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 866) [M::mem_pestat] mean and std.dev: (320.52, 149.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1085) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 704146 sequences (100000016 bp) in 2.415 CPU sec, 2.521 real sec... [M::process] read 704318 sequences (100000090 bp) in 1.880 CPU sec, 1.882 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (81, 288479, 23, 56) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (205, 289, 645) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1525) [M::mem_pestat] mean and std.dev: (358.63, 270.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1965) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 222, 324) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 668) [M::mem_pestat] mean and std.dev: (247.73, 123.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 840) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (227, 577, 5571) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 16259) [M::mem_pestat] mean and std.dev: (2305.83, 2912.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 21603) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (179, 298, 517) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1193) [M::mem_pestat] mean and std.dev: (312.71, 169.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1531) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 704476 reads in 168.793 CPU sec, 5.458 real sec sorting block 68, #reads = 1082629 mem = 536883255 peak = 1153581056 [M::mem_process_seqs] Processed 704060 reads in 109.989 CPU sec, 3.486 real sec sorting block 69, #reads = 1081947 mem = 536882778 peak = 1153581056 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (66, 288403, 16, 65) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (191, 248, 391) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 791) [M::mem_pestat] mean and std.dev: (240.85, 110.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 991) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 223, 325) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 671) [M::mem_pestat] mean and std.dev: (248.47, 124.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 844) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (123, 605, 1688) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4818) [M::mem_pestat] mean and std.dev: (1060.38, 1181.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6383) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (209, 272, 433) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 881) [M::mem_pestat] mean and std.dev: (309.45, 167.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1105) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 710654 sequences (100000229 bp) in 2.409 CPU sec, 2.527 real sec... [M::process] read 708178 sequences (100000023 bp) in 1.450 CPU sec, 1.453 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (66, 287956, 26, 65) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (175, 238, 368) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 754) [M::mem_pestat] mean and std.dev: (257.45, 119.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 947) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 223, 325) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 671) [M::mem_pestat] mean and std.dev: (248.28, 123.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 844) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (491, 836, 1032) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2114) [M::mem_pestat] mean and std.dev: (775.40, 368.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2655) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (173, 303, 354) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 716) [M::mem_pestat] mean and std.dev: (248.42, 93.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 897) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 704146 reads in 172.800 CPU sec, 5.508 real sec [M::mem_process_seqs] Processed 704318 reads in 120.735 CPU sec, 3.936 real sec sorting block 70, #reads = 1080664 mem = 536876805 peak = 1153581056 [M::process] read 707528 sequences (100000029 bp) in 2.129 CPU sec, 2.221 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (59, 290010, 13, 54) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (150, 224, 381) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 843) [M::mem_pestat] mean and std.dev: (263.47, 168.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1074) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (144, 207, 297) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 603) [M::mem_pestat] mean and std.dev: (229.22, 110.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 756) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (157, 449, 720) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1846) [M::mem_pestat] mean and std.dev: (469.83, 414.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2409) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (187, 258, 436) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 934) [M::mem_pestat] mean and std.dev: (288.98, 144.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1183) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 707108 sequences (100000079 bp) in 1.430 CPU sec, 1.432 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (58, 290239, 20, 71) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (143, 236, 581) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1457) [M::mem_pestat] mean and std.dev: (280.19, 226.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1895) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (147, 213, 309) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 633) [M::mem_pestat] mean and std.dev: (236.82, 116.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 795) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (196, 696, 1327) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3589) [M::mem_pestat] mean and std.dev: (594.28, 522.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4720) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (170, 260, 566) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1358) [M::mem_pestat] mean and std.dev: (357.24, 289.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1754) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (44, 290269, 12, 75) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (180, 339, 427) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 921) [M::mem_pestat] mean and std.dev: (298.92, 163.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1168) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (148, 215, 312) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 640) [M::mem_pestat] mean and std.dev: (239.34, 117.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 804) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (282, 518, 852) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1992) [M::mem_pestat] mean and std.dev: (530.25, 343.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2562) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (177, 216, 523) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1215) [M::mem_pestat] mean and std.dev: (294.34, 197.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1561) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 710654 reads in 241.671 CPU sec, 7.815 real sec [M::mem_process_seqs] Processed 708178 reads in 175.056 CPU sec, 5.609 real sec sorting block 71, #reads = 1076341 mem = 536882952 peak = 1153581056 [M::mem_process_seqs] Processed 707528 reads in 193.423 CPU sec, 6.215 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (61, 289170, 39, 67) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (177, 260, 538) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1260) [M::mem_pestat] mean and std.dev: (380.03, 296.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1621) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (148, 216, 313) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 643) [M::mem_pestat] mean and std.dev: (240.08, 118.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 808) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (143, 361, 950) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2564) [M::mem_pestat] mean and std.dev: (583.83, 695.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3371) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (193, 303, 683) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1663) [M::mem_pestat] mean and std.dev: (376.23, 267.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2153) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 706326 sequences (100000158 bp) in 2.741 CPU sec, 2.909 real sec... sorting block 72, #reads = 1085891 mem = 536879500 peak = 1153581056 [M::mem_process_seqs] Processed 707108 reads in 91.301 CPU sec, 2.997 real sec [M::process] read 705210 sequences (100000017 bp) in 2.585 CPU sec, 2.778 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (52, 289440, 14, 70) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (163, 264, 391) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 847) [M::mem_pestat] mean and std.dev: (269.37, 158.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1075) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (149, 218, 316) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 650) [M::mem_pestat] mean and std.dev: (242.15, 119.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 817) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (115, 584, 903) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2479) [M::mem_pestat] mean and std.dev: (517.54, 374.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3267) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (163, 296, 354) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 736) [M::mem_pestat] mean and std.dev: (262.48, 130.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 927) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 73, #reads = 1086444 mem = 536877604 peak = 1153581056 [M::process] read 705620 sequences (100000195 bp) in 1.768 CPU sec, 1.867 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (46, 289301, 18, 65) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (130, 271, 588) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1504) [M::mem_pestat] mean and std.dev: (316.27, 250.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1962) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (150, 220, 319) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 657) [M::mem_pestat] mean and std.dev: (244.44, 120.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 826) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (80, 338, 605) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1655) [M::mem_pestat] mean and std.dev: (304.06, 250.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2180) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (178, 284, 538) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1258) [M::mem_pestat] mean and std.dev: (354.00, 252.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1618) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 706326 reads in 159.245 CPU sec, 5.097 real sec [M::mem_process_seqs] Processed 705210 reads in 104.642 CPU sec, 3.296 real sec [M::process] read 705426 sequences (100000025 bp) in 2.127 CPU sec, 2.211 real sec... sorting block 74, #reads = 1085074 mem = 536881902 peak = 1153581056 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (60, 289261, 21, 75) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (192, 314, 590) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1386) [M::mem_pestat] mean and std.dev: (365.11, 237.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1784) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (150, 221, 322) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 666) [M::mem_pestat] mean and std.dev: (245.71, 122.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 838) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (106, 142, 764) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2080) [M::mem_pestat] mean and std.dev: (366.05, 309.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2738) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (152, 248, 437) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1007) [M::mem_pestat] mean and std.dev: (279.63, 151.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1292) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 705814 sequences (100000122 bp) in 2.451 CPU sec, 2.564 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (55, 289000, 19, 41) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (188, 248, 368) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 728) [M::mem_pestat] mean and std.dev: (243.67, 120.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 908) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (150, 220, 318) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 654) [M::mem_pestat] mean and std.dev: (243.92, 120.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 822) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (153, 407, 934) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2496) [M::mem_pestat] mean and std.dev: (572.61, 504.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3277) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (148, 197, 284) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 556) [M::mem_pestat] mean and std.dev: (217.74, 87.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 692) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 705620 reads in 155.672 CPU sec, 4.939 real sec [M::process] read 706048 sequences (100000145 bp) in 1.820 CPU sec, 1.842 real sec... [M::mem_process_seqs] Processed 705426 reads in 104.124 CPU sec, 3.297 real sec sorting block 75, #reads = 1084879 mem = 536882538 peak = 1153581056 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (56, 289465, 17, 57) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (182, 300, 457) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1007) [M::mem_pestat] mean and std.dev: (309.18, 176.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1282) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (150, 219, 317) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 651) [M::mem_pestat] mean and std.dev: (243.28, 119.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 818) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (670, 825, 3133) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 8059) [M::mem_pestat] mean and std.dev: (1565.59, 1320.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 10522) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (176, 249, 958) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2522) [M::mem_pestat] mean and std.dev: (497.75, 567.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3304) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 704408 sequences (100000012 bp) in 2.404 CPU sec, 2.505 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (65, 289206, 16, 45) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (157, 256, 502) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1192) [M::mem_pestat] mean and std.dev: (310.82, 230.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1537) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (149, 218, 317) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 653) [M::mem_pestat] mean and std.dev: (243.28, 120.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 821) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (610, 871, 4445) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 12115) [M::mem_pestat] mean and std.dev: (2042.62, 2137.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 15950) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (243, 294, 613) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1353) [M::mem_pestat] mean and std.dev: (402.33, 244.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1723) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 704448 sequences (100000174 bp) in 1.800 CPU sec, 1.793 real sec... [M::mem_process_seqs] Processed 705814 reads in 159.219 CPU sec, 5.069 real sec [M::mem_process_seqs] Processed 706048 reads in 103.224 CPU sec, 3.256 real sec sorting block 76, #reads = 1085088 mem = 536879141 peak = 1153581056 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (64, 288669, 16, 51) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (241, 352, 453) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 877) [M::mem_pestat] mean and std.dev: (315.04, 147.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1089) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (151, 221, 321) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 661) [M::mem_pestat] mean and std.dev: (246.12, 121.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 831) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (461, 891, 1456) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3446) [M::mem_pestat] mean and std.dev: (919.06, 690.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4441) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (232, 312, 702) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1642) [M::mem_pestat] mean and std.dev: (419.79, 311.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2112) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 704068 sequences (100000026 bp) in 2.316 CPU sec, 2.416 real sec... [M::process] read 705024 sequences (100000025 bp) in 1.610 CPU sec, 1.607 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (48, 288524, 16, 73) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (146, 312, 466) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1106) [M::mem_pestat] mean and std.dev: (355.74, 278.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1469) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (151, 222, 324) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 670) [M::mem_pestat] mean and std.dev: (247.60, 123.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 843) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (472, 753, 1838) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4570) [M::mem_pestat] mean and std.dev: (765.57, 571.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5936) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (224, 330, 767) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1853) [M::mem_pestat] mean and std.dev: (414.70, 294.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2396) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 704408 reads in 163.319 CPU sec, 5.286 real sec sorting block 77, #reads = 1084321 mem = 536878501 peak = 1153581056 [M::mem_process_seqs] Processed 704448 reads in 106.651 CPU sec, 3.389 real sec sorting block 78, #reads = 1083793 mem = 536878544 peak = 1200246784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (56, 288627, 31, 59) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (178, 283, 476) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1072) [M::mem_pestat] mean and std.dev: (297.04, 149.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1370) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 222, 323) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 665) [M::mem_pestat] mean and std.dev: (247.45, 122.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 836) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (329, 873, 1555) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4007) [M::mem_pestat] mean and std.dev: (855.11, 885.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5233) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (172, 277, 529) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1243) [M::mem_pestat] mean and std.dev: (344.26, 278.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1600) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 703692 sequences (100000135 bp) in 2.027 CPU sec, 2.127 real sec... [M::process] read 703744 sequences (100000122 bp) in 1.760 CPU sec, 1.761 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (54, 288597, 24, 72) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (167, 301, 752) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1922) [M::mem_pestat] mean and std.dev: (357.24, 314.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2507) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (151, 220, 318) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 652) [M::mem_pestat] mean and std.dev: (244.41, 120.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 819) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (273, 657, 827) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1935) [M::mem_pestat] mean and std.dev: (559.50, 336.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2489) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (189, 288, 602) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1428) [M::mem_pestat] mean and std.dev: (390.80, 347.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1841) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 704068 reads in 167.399 CPU sec, 5.331 real sec [M::mem_process_seqs] Processed 705024 reads in 108.607 CPU sec, 3.517 real sec sorting block 79, #reads = 1082846 mem = 536877339 peak = 1200246784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (75, 288471, 16, 55) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (167, 253, 414) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 908) [M::mem_pestat] mean and std.dev: (274.08, 165.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1155) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 223, 323) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 665) [M::mem_pestat] mean and std.dev: (247.74, 122.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 836) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (568, 1321, 5244) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 14596) [M::mem_pestat] mean and std.dev: (2775.12, 2766.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 19272) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (162, 288, 580) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1416) [M::mem_pestat] mean and std.dev: (359.64, 262.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1834) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 703996 sequences (100000234 bp) in 2.210 CPU sec, 2.322 real sec... [M::process] read 704034 sequences (100000296 bp) in 1.460 CPU sec, 1.464 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (38, 288267, 19, 68) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (138, 216, 704) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1836) [M::mem_pestat] mean and std.dev: (398.17, 416.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2402) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 223, 323) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 665) [M::mem_pestat] mean and std.dev: (247.43, 122.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 836) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (462, 822, 2132) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5472) [M::mem_pestat] mean and std.dev: (1277.18, 1295.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7142) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (197, 282, 414) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 848) [M::mem_pestat] mean and std.dev: (287.02, 136.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1065) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 703692 reads in 169.534 CPU sec, 5.464 real sec [M::mem_process_seqs] Processed 703744 reads in 110.169 CPU sec, 3.505 real sec sorting block 80, #reads = 1082962 mem = 536876713 peak = 1200246784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (53, 287827, 17, 62) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (147, 250, 455) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1071) [M::mem_pestat] mean and std.dev: (294.00, 236.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1379) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 222, 322) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 662) [M::mem_pestat] mean and std.dev: (246.91, 122.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 832) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (257, 700, 921) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2249) [M::mem_pestat] mean and std.dev: (601.25, 387.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2913) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (194, 297, 374) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 734) [M::mem_pestat] mean and std.dev: (275.23, 115.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 914) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 716568 sequences (100000032 bp) in 2.468 CPU sec, 2.554 real sec... [M::process] read 712396 sequences (100000234 bp) in 1.940 CPU sec, 1.940 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (64, 287799, 26, 56) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (153, 257, 401) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 897) [M::mem_pestat] mean and std.dev: (279.78, 173.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1145) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 222, 322) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 662) [M::mem_pestat] mean and std.dev: (246.83, 122.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 832) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (448, 869, 2064) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5296) [M::mem_pestat] mean and std.dev: (1323.92, 1344.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6912) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (211, 331, 551) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1231) [M::mem_pestat] mean and std.dev: (354.39, 198.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1571) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 703996 reads in 180.195 CPU sec, 5.737 real sec sorting block 81, #reads = 1079692 mem = 536878912 peak = 1200246784 [M::mem_process_seqs] Processed 704034 reads in 123.303 CPU sec, 3.902 real sec sorting block 82, #reads = 1076901 mem = 536878163 peak = 1236287488 [M::process] read 710752 sequences (100000268 bp) in 2.248 CPU sec, 2.331 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (49, 291708, 21, 45) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (163, 233, 495) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1159) [M::mem_pestat] mean and std.dev: (346.15, 256.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1491) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (138, 196, 279) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 561) [M::mem_pestat] mean and std.dev: (216.77, 103.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 702) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (183, 650, 1526) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4212) [M::mem_pestat] mean and std.dev: (705.26, 606.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5555) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (147, 243, 694) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1788) [M::mem_pestat] mean and std.dev: (384.60, 379.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2335) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 709048 sequences (100000165 bp) in 1.480 CPU sec, 1.473 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (45, 291419, 42, 64) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (180, 315, 834) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2142) [M::mem_pestat] mean and std.dev: (460.02, 432.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2796) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (142, 204, 294) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 598) [M::mem_pestat] mean and std.dev: (227.54, 111.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 750) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (240, 677, 1545) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4155) [M::mem_pestat] mean and std.dev: (727.46, 689.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5460) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (232, 292, 1184) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3088) [M::mem_pestat] mean and std.dev: (525.80, 571.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4040) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (47, 290854, 19, 74) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (146, 198, 441) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1031) [M::mem_pestat] mean and std.dev: (269.05, 175.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1326) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (144, 208, 300) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 612) [M::mem_pestat] mean and std.dev: (231.57, 113.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 768) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (96, 660, 884) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2460) [M::mem_pestat] mean and std.dev: (536.11, 464.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3248) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (275, 367, 481) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 893) [M::mem_pestat] mean and std.dev: (354.55, 151.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1099) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 716568 reads in 269.975 CPU sec, 8.623 real sec [M::mem_process_seqs] Processed 712396 reads in 209.238 CPU sec, 6.731 real sec [M::mem_process_seqs] Processed 710752 reads in 222.169 CPU sec, 7.161 real sec sorting block 83, #reads = 1074039 mem = 536877445 peak = 1236287488 [M::process] read 708374 sequences (100000271 bp) in 2.703 CPU sec, 2.852 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (60, 289841, 19, 81) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (163, 271, 355) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 739) [M::mem_pestat] mean and std.dev: (268.80, 143.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 931) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (146, 212, 307) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 629) [M::mem_pestat] mean and std.dev: (236.16, 116.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 790) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (351, 520, 799) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1695) [M::mem_pestat] mean and std.dev: (483.38, 263.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2143) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (193, 266, 499) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1111) [M::mem_pestat] mean and std.dev: (335.59, 226.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1417) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 84, #reads = 1078534 mem = 536878869 peak = 1236287488 [M::mem_process_seqs] Processed 709048 reads in 103.117 CPU sec, 3.372 real sec [M::process] read 706788 sequences (100000221 bp) in 2.622 CPU sec, 2.803 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (53, 289787, 22, 63) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (167, 285, 418) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 920) [M::mem_pestat] mean and std.dev: (265.87, 158.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1171) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (147, 214, 312) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 642) [M::mem_pestat] mean and std.dev: (239.11, 118.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 807) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (335, 719, 1165) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2825) [M::mem_pestat] mean and std.dev: (746.00, 545.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3655) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (212, 398, 535) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1181) [M::mem_pestat] mean and std.dev: (390.80, 249.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1504) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 706866 sequences (100000238 bp) in 1.910 CPU sec, 1.916 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (61, 289036, 16, 65) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (196, 299, 794) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1990) [M::mem_pestat] mean and std.dev: (443.31, 362.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2588) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (148, 217, 316) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 652) [M::mem_pestat] mean and std.dev: (241.91, 120.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 820) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (942, 1415, 2924) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6888) [M::mem_pestat] mean and std.dev: (1784.50, 1326.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8870) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (146, 235, 592) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1484) [M::mem_pestat] mean and std.dev: (304.84, 259.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1930) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 708374 reads in 200.068 CPU sec, 6.334 real sec [M::process] read 705314 sequences (100000153 bp) in 1.794 CPU sec, 1.794 real sec... sorting block 85, #reads = 1080421 mem = 536878492 peak = 1236287488 [M::mem_process_seqs] Processed 706788 reads in 119.147 CPU sec, 3.807 real sec sorting block 86, #reads = 1080278 mem = 536878876 peak = 1236287488 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (54, 289000, 19, 70) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (235, 304, 580) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1270) [M::mem_pestat] mean and std.dev: (333.83, 212.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1615) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (148, 216, 315) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 649) [M::mem_pestat] mean and std.dev: (241.58, 120.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 816) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (298, 813, 3057) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 8575) [M::mem_pestat] mean and std.dev: (910.25, 886.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 11334) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (163, 244, 371) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 787) [M::mem_pestat] mean and std.dev: (266.06, 140.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 995) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 704922 sequences (100000109 bp) in 2.203 CPU sec, 2.325 real sec... [M::process] read 704380 sequences (100000187 bp) in 1.800 CPU sec, 1.804 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (55, 288199, 24, 70) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (210, 343, 522) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1146) [M::mem_pestat] mean and std.dev: (332.28, 219.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1458) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (150, 221, 321) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 663) [M::mem_pestat] mean and std.dev: (246.14, 122.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 834) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (372, 719, 1477) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3687) [M::mem_pestat] mean and std.dev: (785.59, 572.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4792) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (169, 259, 400) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 862) [M::mem_pestat] mean and std.dev: (284.22, 145.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1093) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 706866 reads in 181.230 CPU sec, 5.821 real sec [M::mem_process_seqs] Processed 705314 reads in 115.689 CPU sec, 3.671 real sec sorting block 87, #reads = 1078793 mem = 536879302 peak = 1236287488 [M::process] read 703900 sequences (100000157 bp) in 2.043 CPU sec, 2.156 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (85, 287955, 24, 72) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (248, 372, 518) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1058) [M::mem_pestat] mean and std.dev: (339.21, 184.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1328) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (151, 221, 322) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 664) [M::mem_pestat] mean and std.dev: (246.77, 123.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 835) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (279, 475, 644) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1374) [M::mem_pestat] mean and std.dev: (362.53, 186.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1739) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (221, 306, 521) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1121) [M::mem_pestat] mean and std.dev: (340.44, 184.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1421) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 703102 sequences (100000121 bp) in 1.878 CPU sec, 1.877 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (77, 287917, 15, 59) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (144, 242, 523) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1281) [M::mem_pestat] mean and std.dev: (295.84, 232.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1660) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 223, 322) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 662) [M::mem_pestat] mean and std.dev: (247.11, 121.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 832) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (177, 352, 598) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1440) [M::mem_pestat] mean and std.dev: (349.23, 268.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1861) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (176, 279, 594) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1430) [M::mem_pestat] mean and std.dev: (311.02, 216.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1848) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (65, 288893, 17, 58) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (146, 243, 686) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1766) [M::mem_pestat] mean and std.dev: (377.80, 352.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2306) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 222, 322) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 662) [M::mem_pestat] mean and std.dev: (246.89, 122.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 832) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (704, 840, 3509) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 9119) [M::mem_pestat] mean and std.dev: (1717.29, 1532.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 11924) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (217, 358, 577) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1297) [M::mem_pestat] mean and std.dev: (381.90, 236.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1657) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 704922 reads in 244.790 CPU sec, 7.912 real sec [M::mem_process_seqs] Processed 703900 reads in 184.753 CPU sec, 5.913 real sec sorting block 88, #reads = 1080012 mem = 536878328 peak = 1236287488 [M::mem_process_seqs] Processed 704380 reads in 204.214 CPU sec, 6.550 real sec sorting block 89, #reads = 1080863 mem = 536887602 peak = 1236287488 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (58, 288134, 24, 88) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (171, 240, 445) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 993) [M::mem_pestat] mean and std.dev: (262.62, 162.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1267) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::process] read 702930 sequences (100000168 bp) in 2.587 CPU sec, 2.760 real sec... [M::mem_pestat] (25, 50, 75) percentile: (153, 223, 323) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 663) [M::mem_pestat] mean and std.dev: (247.62, 121.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 833) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (247, 824, 1245) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3241) [M::mem_pestat] mean and std.dev: (809.13, 743.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4239) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (166, 225, 357) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 739) [M::mem_pestat] mean and std.dev: (243.68, 126.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 930) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 702712 sequences (100000196 bp) in 1.826 CPU sec, 1.873 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (63, 287298, 31, 95) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (221, 306, 518) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1112) [M::mem_pestat] mean and std.dev: (330.98, 205.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1409) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (154, 224, 325) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 667) [M::mem_pestat] mean and std.dev: (248.73, 122.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 838) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (303, 896, 2323) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6363) [M::mem_pestat] mean and std.dev: (1387.63, 1471.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8383) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (221, 382, 622) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1424) [M::mem_pestat] mean and std.dev: (374.94, 233.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1825) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 703102 reads in 167.297 CPU sec, 5.371 real sec [M::mem_process_seqs] Processed 702930 reads in 112.199 CPU sec, 3.539 real sec [M::process] read 703204 sequences (100000126 bp) in 1.681 CPU sec, 1.730 real sec... sorting block 90, #reads = 1081105 mem = 536876219 peak = 1236287488 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (72, 287951, 23, 71) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (144, 274, 463) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1101) [M::mem_pestat] mean and std.dev: (295.18, 240.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1420) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (154, 226, 326) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 670) [M::mem_pestat] mean and std.dev: (249.75, 122.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 842) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (247, 481, 1328) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3490) [M::mem_pestat] mean and std.dev: (581.25, 680.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4571) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (198, 257, 695) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1689) [M::mem_pestat] mean and std.dev: (377.97, 320.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2186) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 702830 sequences (100000119 bp) in 2.475 CPU sec, 2.606 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (83, 287919, 16, 58) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (167, 269, 676) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1694) [M::mem_pestat] mean and std.dev: (362.25, 269.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2203) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (153, 225, 326) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 672) [M::mem_pestat] mean and std.dev: (249.43, 123.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 845) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (284, 502, 752) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1688) [M::mem_pestat] mean and std.dev: (481.29, 335.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2156) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (249, 389, 539) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1119) [M::mem_pestat] mean and std.dev: (378.15, 193.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1409) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 640246 sequences (91025711 bp) in 1.660 CPU sec, 1.664 real sec... [M::mem_process_seqs] Processed 702712 reads in 162.221 CPU sec, 5.147 real sec sorting block 91, #reads = 1080757 mem = 536878124 peak = 1236287488 [M::mem_process_seqs] Processed 703204 reads in 108.050 CPU sec, 3.421 real sec sorting block 92, #reads = 1081384 mem = 536879995 peak = 1249062912 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (54, 287906, 16, 56) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (144, 277, 412) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 948) [M::mem_pestat] mean and std.dev: (264.27, 156.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1216) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (154, 225, 326) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 670) [M::mem_pestat] mean and std.dev: (249.66, 123.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 842) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (64, 391, 2331) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6865) [M::mem_pestat] mean and std.dev: (838.20, 977.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9132) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (187, 318, 689) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1693) [M::mem_pestat] mean and std.dev: (396.08, 264.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2195) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (81, 262033, 21, 45) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (205, 346, 508) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1114) [M::mem_pestat] mean and std.dev: (337.41, 196.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1417) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 224, 325) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 671) [M::mem_pestat] mean and std.dev: (248.80, 123.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 844) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (288, 406, 1448) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3768) [M::mem_pestat] mean and std.dev: (575.11, 474.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4928) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (210, 269, 470) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 990) [M::mem_pestat] mean and std.dev: (320.74, 174.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1250) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 702830 reads in 151.258 CPU sec, 4.893 real sec [M::mem_process_seqs] Processed 640246 reads in 98.151 CPU sec, 3.167 real sec sorting block 93, #reads = 1082469 mem = 536881188 peak = 1249062912 os version: Linux 6.12.88 cpu vendor: GenuineIntel signature: 000a06d1 features: 1f8bfbff fffab20b extended: f1bf27eb 1b407f7e amd bits: 2c100800 00000121 brand: Intel(R) Xeon(R) 6975P-C threads: 31 algo: bwa-mem license: sentieon:klib=31 reads: 101456352 overall: 70447022080 mem 14257.940 user 159.242 sys 473.321 real [main] Version: 0.7.17-r1188 [main] CMD: /opt/conda/share/sentieon-202308.03-3/libexec/bwa mem -K 100000000 -Y -R @RG\tID:A23MHWWLT4.1136_4ZB-T1-TDNA-1_A23MHWWLT4_1.L005\tPU:L005\tSM:1136_4ZB-T1-TDNA-1_A23MHWWLT4_1\tLB:1136_4ZB-T1-TDNA-1_A23MHWWLT4_1\tDS:s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta\tPL:ILLUMINA -t 31 ./BWAIndex/Homo_sapiens_assembly38.fasta.64 1136_4ZB-T1-TDNA-1_A23MHWWLT4_1_R1.fastq.gz 1136_4ZB-T1-TDNA-1_A23MHWWLT4_1_R2.fastq.gz [main] Real time: 473.352 sec; CPU: 14417.185 sec sorting block 94, #reads = 366724 mem = 182453473 peak = 1249062912 uniq header count 1 merging 95 blocks sw version: sentieon-genomics-202308.03 os version: Linux 6.12.88 cpu vendor: GenuineIntel signature: 000a06d1 features: 1f8bfbff fffab20b extended: f1bf27eb 1b407f7e amd bits: 2c100800 00000121 brand: Intel(R) Xeon(R) 6975P-C threads: 31 max 64 algo: util-sort license: sentieon:util=1 output file size: 5748633106 output reads: 102176992 bam_mem_sort: 95 calls 48.542 user 0.674 sys 49.451 real bam_write: 95 calls 22.056 user 1.322 sys 23.675 real execute: 1 calls 28.173 user 0.901 sys 507.368 real merge_files: 1 calls 28.154 user 0.874 sys 33.825 real parse_chunk: 1510 calls 59.238 user 15.793 sys 76.161 real read_chunk: 4085 calls 32.375 user 27.515 sys 428.845 real sort_block: 1 calls 22.142 user 27.084 sys 414.133 real write_chunk: 2573 calls 27.808 user 0.655 sys 33.037 real overall: 3197771776 mem 1324.339 user 55.664 sys 507.385 real ls: cannot access '*.cram': No such file or directory