Detecting adapter sequence for read1...
>Illumina TruSeq Adapter Read 1
AGATCGGAAGAGCACACGTCTGAACTCCAGTCA
Detecting adapter sequence for read2...
>Illumina TruSeq Adapter Read 2
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT
Read1 before filtering:
total reads: 33082404
total bases: 4995443004
Q20 bases: 4741714855(94.9208%)
Q30 bases: 4474730707(89.5763%)
Q40 bases: 4474730707(89.5763%)
Read2 before filtering:
total reads: 33082404
total bases: 4995443004
Q20 bases: 4802225478(96.1321%)
Q30 bases: 4527327388(90.6291%)
Q40 bases: 4527327388(90.6291%)
Read1 after filtering:
total reads: 32759191
total bases: 3773956531
Q20 bases: 3708357697(98.2618%)
Q30 bases: 3567840094(94.5385%)
Q40 bases: 3567840094(94.5385%)
Read2 after filtering:
total reads: 32759191
total bases: 3776395905
Q20 bases: 3709686359(98.2335%)
Q30 bases: 3579582345(94.7883%)
Q40 bases: 3579582345(94.7883%)
Filtering result:
reads passed filter: 65518382
reads failed due to low quality: 640456
reads failed due to too many N: 2782
reads failed due to too short: 3188
reads with adapter trimmed: 49586849
bases trimmed due to adapters: 2351679326
Duplication rate: 5.69978%
Insert size peak (evaluated by paired-end reads): 98
JSON report: 1029_BCAN-T1-TDNA-1_A23MHWWLT4_1.fastp.json
HTML report: 1029_BCAN-T1-TDNA-1_A23MHWWLT4_1.fastp.html
fastp --in1 1029_BCAN-T1-TDNA-1_A23MHWWLT4_1_S29_L005_R1_001.fastq.gz --in2 1029_BCAN-T1-TDNA-1_A23MHWWLT4_1_S29_L005_R2_001.fastq.gz --out1 1029_BCAN-T1-TDNA-1_A23MHWWLT4_1/1029_BCAN-T1-TDNA-1_A23MHWWLT4_1_R1.fastq.gz --out2 1029_BCAN-T1-TDNA-1_A23MHWWLT4_1/1029_BCAN-T1-TDNA-1_A23MHWWLT4_1_R2.fastq.gz --detect_adapter_for_pe --length_required 15 --json 1029_BCAN-T1-TDNA-1_A23MHWWLT4_1.fastp.json --html 1029_BCAN-T1-TDNA-1_A23MHWWLT4_1.fastp.html --thread 4
fastp v1.0.1, time used: 130 seconds