cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i 1136_6TL-T1-TDNA-1_A23MHWWLT4_1.md.bam --algo AlignmentStat 1136_6TL-T1-TDNA-1_A23MHWWLT4_1.sentieon.alignment_summary_metrics --algo InsertSizeMetricAlgo 1136_6TL-T1-TDNA-1_A23MHWWLT4_1.sentieon.insert_size_metrics --algo QualDistribution 1136_6TL-T1-TDNA-1_A23MHWWLT4_1.sentieon.quality_distribution_metrics --algo BaseDistributionByCycle 1136_6TL-T1-TDNA-1_A23MHWWLT4_1.sentieon.base_distribution_by_cycle_metrics --algo MeanQualityByCycle 1136_6TL-T1-TDNA-1_A23MHWWLT4_1.sentieon.quality_by_cycle_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:172000001, elapsed 6.9s, est remaining 131.4s, peak mem 2421MB, user 173.5s, sys 2.4s, output queue size 44
progress 10% @chr2:90000001, elapsed 13.4s, est remaining 120.4s, peak mem 3405MB, user 375.5s, sys 3.8s, output queue size 96
progress 15% @chr3:8000001, elapsed 19.8s, est remaining 112.1s, peak mem 4045MB, user 568.4s, sys 4.8s, output queue size 122
progress 20% @chr3:176000001, elapsed 24.9s, est remaining 99.7s, peak mem 4064MB, user 731.5s, sys 5.4s, output queue size 174
progress 25% @chr4:135000001, elapsed 30.3s, est remaining 90.9s, peak mem 4211MB, user 891.3s, sys 6.0s, output queue size 302
progress 30% @chr5:107000001, elapsed 34.7s, est remaining 81.1s, peak mem 4342MB, user 1021.9s, sys 6.5s, output queue size 464
progress 35% @chr6:63000001, elapsed 41.2s, est remaining 76.4s, peak mem 4474MB, user 1207.7s, sys 7.2s, output queue size 625
progress 40% @chr7:79000001, elapsed 48.2s, est remaining 72.3s, peak mem 4844MB, user 1392.3s, sys 7.9s, output queue size 786
progress 45% @chr8:69000001, elapsed 57.5s, est remaining 70.3s, peak mem 5371MB, user 1685.9s, sys 8.8s, output queue size 204
progress 50% @chr9:87000001, elapsed 70.6s, est remaining 70.6s, peak mem 6901MB, user 2029.4s, sys 9.9s, output queue size 366
progress 55% @chr10:97000001, elapsed 78.8s, est remaining 64.5s, peak mem 6978MB, user 2297.5s, sys 10.9s, output queue size 527
progress 60% @chr11:130000001, elapsed 85.0s, est remaining 56.7s, peak mem 6978MB, user 2523.1s, sys 11.7s, output queue size 510
progress 65% @chr12:123000001, elapsed 93.0s, est remaining 50.1s, peak mem 6978MB, user 2763.7s, sys 12.2s, output queue size 577
progress 70% @chr14:50000001, elapsed 97.3s, est remaining 41.7s, peak mem 6978MB, user 2929.8s, sys 12.9s, output queue size 635
progress 75% @chr16:42000001, elapsed 105.4s, est remaining 35.1s, peak mem 6978MB, user 3166.0s, sys 13.7s, output queue size 461
progress 80% @chr18:9000001, elapsed 115.9s, est remaining 29.0s, peak mem 6978MB, user 3437.3s, sys 14.5s, output queue size 623
progress 85% @chr20:23000001, elapsed 123.9s, est remaining 21.9s, peak mem 6978MB, user 3666.0s, sys 15.2s, output queue size 785
progress 90% @chrX:35000001, elapsed 130.6s, est remaining 14.5s, peak mem 6978MB, user 3905.6s, sys 15.9s, output queue size 947
progress 95% @chrY:54000001, elapsed 136.0s, est remaining 7.2s, peak mem 6978MB, user 4023.1s, sys 16.3s, output queue size 1109
progress 100% @chrX:67000001, elapsed 158.1s, est remaining 0.0s, peak mem 7032MB, user 4287.5s, sys 16.8s, output queue size 3540
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
signature: 000a06d1
features: 1f8bfbff fffab20b
extended: f1bf27eb 1b407f7e
amd bits: 2c100800 00000121
brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 192
algo: AlignmentStat InsertSizeMetricAlgo QualDistribution BaseDistributionByCycle MeanQualityByCycle
license: sentieon:Metrics=31
input file size: 44707427019
reads: 902411031
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 728.279 user 14.093 sys 744.966 real
done: 1 calls 0.043 user 0.000 sys 0.047 real
exec_no_coor: 1 calls 0.006 user 0.013 sys 0.028 real
execute: 1 calls 0.003 user 0.003 sys 158.191 real
idle: 656 calls 0.182 user 0.011 sys 630.011 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 7374274560 mem 4289.654 user 17.188 sys 159.477 real