File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3c/d4c62250616ab328fc4beceae78730/.command.err
Size
100.8 KB
Task
DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (positive_somatic_control_1;chr6_138229684-138229952.bed)
Attempt

Content

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[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXtkK6r7/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXtkK6r7/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXtkK6r7/chr6_138229684-138229952.bed.gz.tbi
[2026-06-06T01:01:44.530746Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-06T01:01:44.531648Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-06T01:01:44.531659Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-06T01:01:44.531663Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-06T01:01:44.531667Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXtkK6r7'
[2026-06-06T01:01:44.531671Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-06T01:01:44.531676Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-06T01:01:44.531679Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-06T01:01:44.531683Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-06-06T01:01:44.531687Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-06T01:01:44.531690Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-06T01:01:44.531694Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-06T01:01:44.531698Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-06T01:01:44.531701Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-06T01:01:44.532212Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-06T01:01:44.532311Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-06T01:01:44.537884Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-06T01:01:44.538594Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-06T01:01:44.538954Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-06T01:01:44.539343Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.539530Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-06T01:01:44.540038Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.540146Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.540216Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.540332Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.540402Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.540682Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.540995Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.541086Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-06T01:01:44.541310Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.541469Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.542059Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.542375Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.543978Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.544146Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-06T01:01:44.544468Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.544762Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.544827Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.544937Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.545000Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.545201Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.545268Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.545380Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.545448Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.545556Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.545617Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.545873Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.546155Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.546275Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.546340Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.546450Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.546514Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.546638Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.546700Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.546810Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.546877Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.546983Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.547050Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.547202Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.547432Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.547918Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.547992Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.548107Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.548169Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.548282Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.548350Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.548462Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.548574Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.548692Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.548757Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.548864Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.548929Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.549063Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.549423Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.549942Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.550019Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.550142Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.550208Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.550319Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.550383Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.550499Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.550562Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.550676Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.550739Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.550899Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.551430Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.551548Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.551611Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.551723Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.551788Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.551901Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.551964Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.552077Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.552142Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.553471Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.554277Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.554485Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.554568Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.554688Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.554757Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.554872Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.554933Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.555054Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.555218Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.555905Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.555978Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.556095Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.556173Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.556288Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.556366Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.556484Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.556556Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.556666Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.556731Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.556855Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.557022Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.557743Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.557805Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.557916Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.557981Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.558142Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.558208Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.558322Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.558386Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.558508Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.558576Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.558684Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.558763Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.559014Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.559817Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.561829Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.562500Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.562782Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.562858Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.576346Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.577003Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-06T01:01:44.577108Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.578012Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-06T01:01:44.578329Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.578450Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-06-06T01:01:44.579196Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-06-06T01:01:44.579418Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.580105Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.580289Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-06T01:01:44.580723Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.581442Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-06-06T01:01:44.581744Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.582638Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-06-06T01:01:44.584120Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-06T01:01:44.584681Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.585588Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-06-06T01:01:44.589510Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.590126Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-06-06T01:01:44.590880Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0012] Task initiated on local node
[2026-06-06T01:01:44.591067Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-06T01:01:44.593765Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0001] Task initiated on local node
[2026-06-06T01:01:44.597622Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-06-06T01:01:44.598134Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0000] Task initiated on local node
[2026-06-06T01:01:44.602552Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0007] Task initiated on local node
[2026-06-06T01:01:44.604618Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-06-06T01:01:44.605862Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0002] Task initiated on local node
[2026-06-06T01:01:44.669267Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-06T01:01:44.669334Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-06T01:01:44.670278Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-06-06T01:01:44.670547Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-06-06T01:01:44.674039Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0002] Task initiated on local node
[2026-06-06T01:01:44.674913Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0004] Task initiated on local node
[2026-06-06T01:02:07.946611Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-06-06T01:02:07.948318Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-06-06T01:02:07.951129Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0002] Task initiated on local node
[2026-06-06T01:02:08.012481Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-06-06T01:02:08.013528Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-06T01:02:08.016417Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-06-06T01:02:08.228087Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-06T01:02:08.228170Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-06-06T01:02:08.229180Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-06-06T01:02:08.229621Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-06-06T01:02:08.232516Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0009] Task initiated on local node
[2026-06-06T01:02:08.233558Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0003] Task initiated on local node
[2026-06-06T01:02:19.599207Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-06-06T01:02:19.601110Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-06-06T01:02:19.604457Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0002] Task initiated on local node
[2026-06-06T01:02:38.930008Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-06-06T01:02:38.931856Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-06-06T01:02:38.935027Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0004] Task initiated on local node
[2026-06-06T01:03:56.819929Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-06-06T01:03:56.821502Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-06-06T01:03:56.824191Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0005] Task initiated on local node
[2026-06-06T01:03:58.088763Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-06-06T01:03:58.089930Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-06-06T01:03:58.092974Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0006] Task initiated on local node
[2026-06-06T01:04:02.264023Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:02.265153Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-06-06T01:04:02.268276Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0000] Task initiated on local node
[2026-06-06T01:04:03.582395Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:03.583525Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-06-06T01:04:03.586409Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0011] Task initiated on local node
[2026-06-06T01:04:03.647911Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:03.648922Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-06-06T01:04:03.651865Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0010] Task initiated on local node
[2026-06-06T01:04:22.675330Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:22.677132Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-06-06T01:04:22.679956Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0009] Task initiated on local node
[2026-06-06T01:04:22.741564Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:22.742498Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-06-06T01:04:22.745186Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0007] Task initiated on local node
[2026-06-06T01:04:32.519002Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:32.520054Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-06T01:04:32.522628Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-06-06T01:04:32.552157Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:32.553234Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-06-06T01:04:32.556087Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0003] Task initiated on local node
[2026-06-06T01:04:35.624737Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:35.625764Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-06-06T01:04:35.628651Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0000] Task initiated on local node
[2026-06-06T01:04:35.690301Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:35.691313Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-06T01:04:35.694017Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-06-06T01:04:35.755442Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:35.756362Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-06T01:04:35.758866Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-06-06T01:04:36.020974Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:36.021887Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-06T01:04:36.024732Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-06-06T01:05:00.050265Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:00.051926Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-06-06T01:05:00.054763Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0011] Task initiated on local node
[2026-06-06T01:05:06.821815Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:06.822856Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-06-06T01:05:06.825877Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0005] Task initiated on local node
[2026-06-06T01:05:06.854982Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:06.855959Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-06T01:05:06.858210Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-06-06T01:05:06.887894Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:06.888767Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-06T01:05:06.891179Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-06-06T01:05:06.920614Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:06.921461Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-06-06T01:05:06.923758Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0012] Task initiated on local node
[2026-06-06T01:05:06.985481Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:06.986330Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-06T01:05:06.988746Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-06-06T01:05:07.018236Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:07.019097Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-06-06T01:05:07.021386Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0011] Task initiated on local node
[2026-06-06T01:05:13.889485Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:13.890525Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-06-06T01:05:13.893277Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0007] Task initiated on local node
[2026-06-06T01:05:13.954701Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:13.955645Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-06-06T01:05:13.958279Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0008] Task initiated on local node
[2026-06-06T01:05:28.482827Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:28.484540Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-06-06T01:05:28.487362Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0010] Task initiated on local node
[2026-06-06T01:06:15.911930Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-06-06T01:06:15.913716Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-06T01:06:15.917048Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-06-06T01:06:15.977831Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-06T01:06:15.979018Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-06-06T01:06:15.981647Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0005] Task initiated on local node
[2026-06-06T01:06:28.600304Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-06-06T01:06:28.601650Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-06-06T01:06:28.604494Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0005] Task initiated on local node
[2026-06-06T01:06:28.633808Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-06-06T01:06:28.634662Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-06T01:06:28.637166Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-06-06T01:06:28.666843Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-06T01:06:28.667685Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-06-06T01:06:28.669981Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0006] Task initiated on local node
[2026-06-06T01:06:37.691620Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-06-06T01:06:37.692533Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-06-06T01:06:37.695550Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0001] Task initiated on local node
[2026-06-06T01:06:47.619431Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-06-06T01:06:47.620650Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-06-06T01:06:47.623763Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0012] Task initiated on local node
[2026-06-06T01:07:20.556356Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-06-06T01:07:20.560424Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-06-06T01:07:20.566868Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0011] Task initiated on local node
[2026-06-06T01:07:20.678819Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-06-06T01:07:20.679767Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-06T01:07:20.682255Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-06-06T01:07:20.744348Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-06T01:07:20.746322Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-06T01:07:20.750279Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-06-06T01:07:20.860903Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-06T01:07:20.863620Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-06T01:07:20.870583Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-06-06T01:07:20.932998Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-06T01:07:20.934797Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-06-06T01:07:20.939248Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0004] Task initiated on local node
[2026-06-06T01:07:21.049317Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-06-06T01:07:21.050950Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-06-06T01:07:21.055241Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0009] Task initiated on local node
[2026-06-06T01:07:21.969547Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-06-06T01:07:21.970823Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-06-06T01:07:21.974363Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0007] Task initiated on local node
[2026-06-06T01:07:34.090512Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-06-06T01:07:34.092035Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-06T01:07:34.094836Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-06-06T01:07:34.156384Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-06T01:07:34.157312Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-06T01:07:34.159758Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_005_chr6_0000] Task initiated on local node
[2026-06-06T01:07:34.221243Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-06T01:07:34.222250Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-06T01:07:34.224627Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-06-06T01:07:34.254040Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-06T01:07:34.254897Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-06T01:07:34.257774Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-06-06T01:07:34.318939Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-06T01:07:34.319778Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-06-06T01:07:34.322498Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0008] Task initiated on local node
[2026-06-06T01:07:42.942698Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-06-06T01:07:42.943654Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-06T01:07:42.946379Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-06-06T01:07:43.008015Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-06T01:07:43.008845Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-06T01:07:43.011361Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-06-06T01:07:43.072901Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-06T01:07:43.073693Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-06-06T01:07:43.076059Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0002] Task initiated on local node
[2026-06-06T01:07:43.137777Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-06-06T01:07:43.138598Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-06T01:07:43.141264Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-06-06T01:08:44.517313Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-06-06T01:08:44.518815Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-06-06T01:08:44.522081Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0003] Task initiated on local node
[2026-06-06T01:08:44.583020Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-06-06T01:08:44.583898Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-06T01:08:44.586787Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-06-06T01:08:44.647785Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-06T01:08:44.648541Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-06T01:08:44.650945Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-06-06T01:08:44.680397Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-06T01:08:44.681124Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-06-06T01:08:44.683595Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0011] Task initiated on local node
[2026-06-06T01:08:44.712920Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-06-06T01:08:44.713634Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-06-06T01:08:44.716344Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0007] Task initiated on local node
[2026-06-06T01:08:44.777933Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-06-06T01:08:44.778642Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-06T01:08:44.781207Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-06-06T01:08:44.842667Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-06T01:08:44.843454Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-06T01:08:44.846128Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-06-06T01:08:44.875242Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-06T01:08:44.875925Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-06-06T01:08:44.878313Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0007] Task initiated on local node
[2026-06-06T01:08:44.939849Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-06-06T01:08:44.940799Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-06-06T01:08:44.943543Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0010] Task initiated on local node
[2026-06-06T01:08:45.004728Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-06-06T01:08:45.005683Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-06-06T01:08:45.008110Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0010] Task initiated on local node
[2026-06-06T01:08:45.037455Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-06-06T01:08:45.038377Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-06-06T01:08:45.041082Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0009] Task initiated on local node
[2026-06-06T01:08:45.070256Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-06-06T01:08:45.071205Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-06-06T01:08:45.073892Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0013] Task initiated on local node
[2026-06-06T01:08:56.841076Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-06-06T01:08:56.842586Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-06-06T01:08:56.845637Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0011] Task initiated on local node
[2026-06-06T01:08:56.906800Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-06-06T01:08:56.907503Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-06-06T01:08:56.909795Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0004] Task initiated on local node
[2026-06-06T01:08:56.939383Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-06-06T01:08:56.940040Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-06-06T01:08:56.942361Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0006] Task initiated on local node
[2026-06-06T01:08:56.971967Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-06-06T01:08:56.972628Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-06-06T01:08:56.975310Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0000] Task initiated on local node
[2026-06-06T01:08:57.036574Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-06-06T01:08:57.037225Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-06-06T01:08:57.039793Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0003] Task initiated on local node
[2026-06-06T01:08:57.101285Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-06-06T01:08:57.101936Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-06-06T01:08:57.104445Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0010] Task initiated on local node
[2026-06-06T01:08:57.133876Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-06-06T01:08:57.134506Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-06-06T01:08:57.136867Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0006] Task initiated on local node
[2026-06-06T01:08:57.166340Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-06-06T01:08:57.166976Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-06-06T01:08:57.169093Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0008] Task initiated on local node
[2026-06-06T01:08:57.230892Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-06-06T01:08:57.231559Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-06T01:08:57.234153Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-06-06T01:08:57.295892Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-06T01:08:57.296524Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-06T01:08:57.298992Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-06-06T01:08:57.328369Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-06T01:08:57.328969Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-06-06T01:08:57.331227Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0004] Task initiated on local node
[2026-06-06T01:08:57.360770Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-06-06T01:08:57.361378Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-06-06T01:08:57.363833Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0000] Task initiated on local node
[2026-06-06T01:09:05.583392Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-06-06T01:09:05.584072Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-06-06T01:09:05.587038Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0002] Task initiated on local node
[2026-06-06T01:09:05.648226Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-06-06T01:09:05.648888Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-06-06T01:09:05.651500Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0009] Task initiated on local node
[2026-06-06T01:09:13.970834Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-06-06T01:09:13.972272Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-06-06T01:09:13.975028Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0012] Task initiated on local node
[2026-06-06T01:09:14.036253Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-06-06T01:09:14.036884Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-06-06T01:09:14.039186Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0001] Task initiated on local node
[2026-06-06T01:09:14.100839Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-06-06T01:09:14.101432Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-06-06T01:09:14.103976Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0001] Task initiated on local node
[2026-06-06T01:09:43.378402Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-06-06T01:09:43.379733Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-06-06T01:09:43.382640Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0009] Task initiated on local node
[2026-06-06T01:09:43.443681Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-06-06T01:09:43.444289Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-06-06T01:09:43.446921Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0008] Task initiated on local node
[2026-06-06T01:10:18.713112Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-06-06T01:10:18.714614Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-06-06T01:10:18.717583Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0005] Task initiated on local node
[2026-06-06T01:10:25.282991Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-06-06T01:10:25.283596Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-06T01:10:25.286542Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-06-06T01:10:25.347980Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-06T01:10:25.348558Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-06-06T01:10:25.351198Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0006] Task initiated on local node
[2026-06-06T01:10:30.763923Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-06-06T01:10:30.764466Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-06-06T01:10:30.767089Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0001] Task initiated on local node
[2026-06-06T01:10:30.828455Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-06-06T01:10:30.829012Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-06-06T01:10:30.831723Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0003] Task initiated on local node
[2026-06-06T01:10:56.648509Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-06-06T01:10:56.649694Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-06-06T01:10:56.652770Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0013] Task initiated on local node
[2026-06-06T01:10:56.713915Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-06-06T01:10:56.714469Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-06T01:10:56.717028Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-06-06T01:10:56.778431Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-06T01:10:56.778966Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-06-06T01:10:56.781396Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0000] Task initiated on local node
[2026-06-06T01:10:56.842997Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-06-06T01:10:56.843553Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-06T01:10:56.845747Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-06-06T01:10:56.875452Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-06T01:10:56.875965Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-06-06T01:10:56.878191Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0005] Task initiated on local node
[2026-06-06T01:10:56.907769Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-06-06T01:10:56.908275Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-06-06T01:10:56.910687Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0010] Task initiated on local node
[2026-06-06T01:10:56.940128Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-06-06T01:10:56.940629Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-06T01:10:56.943348Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-06-06T01:10:56.972518Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-06T01:10:56.973066Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-06T01:10:56.975425Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-06-06T01:10:57.005049Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-06T01:11:08.573812Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-06-06T01:11:08.575310Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-06-06T01:11:08.577805Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0006] Task initiated on local node
[2026-06-06T01:11:08.607461Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-06-06T01:11:08.972539Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-06-06T01:11:08.973111Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-06-06T01:11:08.975735Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0008] Task initiated on local node
[2026-06-06T01:11:09.037260Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-06-06T01:12:10.862589Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-06T01:12:10.863911Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-06T01:12:10.866352Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-06-06T01:12:10.927808Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-06T01:12:17.295819Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-06-06T01:12:17.296366Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-06-06T01:12:17.299060Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0001] Task initiated on local node
[2026-06-06T01:12:17.360420Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-06-06T01:12:25.582971Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-06-06T01:12:25.583541Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-06-06T01:12:25.586356Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0003] Task initiated on local node
[2026-06-06T01:12:25.647475Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-06-06T01:14:05.332094Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-06-06T01:14:05.333454Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-06-06T01:14:05.336128Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0008] Task initiated on local node
[2026-06-06T01:14:05.397811Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-06-06T01:16:20.335088Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-06-06T01:16:20.335714Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-06-06T01:16:20.338755Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0004] Task initiated on local node
[2026-06-06T01:16:20.400142Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-06-06T01:16:20.400430Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-06T01:16:20.400545Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-06T01:16:20.400979Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-06T01:16:20.401506Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-06T01:16:20.404835Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-06T01:16:20.405991Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-06T01:16:20.406923Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-06T01:16:20.434489Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-06T01:16:20.434716Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-06T01:16:20.436899Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-06T01:16:20.436968Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-06T01:16:20.437160Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-06T01:16:20.437475Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-06T01:16:20.439451Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-06T01:16:20.501385Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-06T01:16:20.501448Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-06T01:16:20.501618Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-06T01:16:20.503999Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-06T01:16:20.534014Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-06T01:16:33.656066Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-06T01:16:48.460304Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-06T01:16:48.460304Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] 
[2026-06-06T01:16:48.460304Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-06T01:16:48.460359Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] 
[2026-06-06T01:16:48.460366Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-06T01:16:48.460372Z] [nf-3cd4c62250616ab328fc4beceae78730-8da4c-8hbx4] [605_1] [WorkflowRunner] Elapsed time for full workflow: 903 sec