cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i 1029_N5D-T1-TDNA-1_A23MHWWLT4_1.md.bam --algo AlignmentStat 1029_N5D-T1-TDNA-1_A23MHWWLT4_1.sentieon.alignment_summary_metrics --algo InsertSizeMetricAlgo 1029_N5D-T1-TDNA-1_A23MHWWLT4_1.sentieon.insert_size_metrics --algo QualDistribution 1029_N5D-T1-TDNA-1_A23MHWWLT4_1.sentieon.quality_distribution_metrics --algo BaseDistributionByCycle 1029_N5D-T1-TDNA-1_A23MHWWLT4_1.sentieon.base_distribution_by_cycle_metrics --algo MeanQualityByCycle 1029_N5D-T1-TDNA-1_A23MHWWLT4_1.sentieon.quality_by_cycle_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:187000001, elapsed 18.6s, est remaining 353.4s, peak mem 5814MB, user 407.3s, sys 5.5s, output queue size 150
progress 10% @chr2:38000001, elapsed 33.8s, est remaining 303.9s, peak mem 8977MB, user 934.1s, sys 9.3s, output queue size 117
progress 15% @chr3:8000001, elapsed 50.3s, est remaining 284.8s, peak mem 13025MB, user 1410.3s, sys 11.5s, output queue size 203
progress 20% @chr3:174000001, elapsed 64.6s, est remaining 258.5s, peak mem 13490MB, user 1846.5s, sys 14.6s, output queue size 283
progress 25% @chr4:135000001, elapsed 76.7s, est remaining 230.1s, peak mem 13856MB, user 2253.1s, sys 16.2s, output queue size 302
progress 30% @chr5:83000001, elapsed 86.1s, est remaining 201.0s, peak mem 14153MB, user 2516.7s, sys 17.2s, output queue size 464
progress 35% @chr6:86000001, elapsed 102.3s, est remaining 190.0s, peak mem 15121MB, user 2920.4s, sys 18.8s, output queue size 625
progress 40% @chr7:66000001, elapsed 120.2s, est remaining 180.3s, peak mem 15722MB, user 3412.9s, sys 20.4s, output queue size 786
progress 45% @chr8:74000001, elapsed 138.0s, est remaining 168.6s, peak mem 16520MB, user 4094.1s, sys 22.5s, output queue size 204
progress 50% @chr9:81000001, elapsed 153.0s, est remaining 153.0s, peak mem 16537MB, user 4473.3s, sys 23.8s, output queue size 366
progress 55% @chr10:103000001, elapsed 171.9s, est remaining 140.6s, peak mem 16804MB, user 4999.6s, sys 25.5s, output queue size 485
progress 60% @chr12:5000001, elapsed 190.4s, est remaining 126.9s, peak mem 16804MB, user 5573.3s, sys 27.3s, output queue size 562
progress 65% @chr13:26000001, elapsed 210.4s, est remaining 113.3s, peak mem 16913MB, user 6001.5s, sys 28.6s, output queue size 724
progress 70% @chr14:76000001, elapsed 222.1s, est remaining 95.2s, peak mem 17017MB, user 6394.2s, sys 29.9s, output queue size 885
progress 75% @chr16:42000001, elapsed 244.6s, est remaining 81.5s, peak mem 17272MB, user 7202.7s, sys 32.1s, output queue size 1047
progress 80% @chr18:1, elapsed 275.9s, est remaining 69.0s, peak mem 17495MB, user 8157.8s, sys 34.6s, output queue size 623
progress 85% @chr20:23000001, elapsed 304.7s, est remaining 53.8s, peak mem 17495MB, user 9008.3s, sys 36.6s, output queue size 785
progress 90% @chrX:42000001, elapsed 321.3s, est remaining 35.7s, peak mem 17495MB, user 9527.9s, sys 38.2s, output queue size 947
progress 95% @chrY:54000001, elapsed 331.1s, est remaining 17.4s, peak mem 17731MB, user 9823.5s, sys 39.0s, output queue size 1109
progress 100% @chr15:88000001, elapsed 390.4s, est remaining 0.0s, peak mem 17731MB, user 10488.3s, sys 40.5s, output queue size 4099
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 192
algo: AlignmentStat InsertSizeMetricAlgo QualDistribution BaseDistributionByCycle MeanQualityByCycle
license: sentieon:Metrics=31
input file size: 108867292734
reads: 2060211395
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1736.826 user 35.471 sys 1771.961 real
done: 1 calls 0.116 user 0.000 sys 0.122 real
exec_no_coor: 1 calls 0.037 user 0.000 sys 0.045 real
execute: 1 calls 0.008 user 0.002 sys 390.956 real
idle: 1635 calls 0.207 user 0.002 sys 1622.147 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 18592780288 mem 10490.991 user 41.287 sys 392.593 real