File Info

Filename
.command.sh
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c4/5125c9c0aee49638dc731eb33b897e/.command.sh
Size
1.1 KB
Attempt
#!/bin/bash -Ceuo pipefail
cat 1136_3LU-T1-TDNA-1_A23MHWWLT4_1_S43_L001_R1_001.fastq.gz 1136_3LU-T1-TDNA-1_A23MHWWLT4_1_S43_L002_R1_001.fastq.gz 1136_3LU-T1-TDNA-1_A23MHWWLT4_1_S43_L003_R1_001.fastq.gz 1136_3LU-T1-TDNA-1_A23MHWWLT4_1_S43_L004_R1_001.fastq.gz 1136_3LU-T1-TDNA-1_A23MHWWLT4_1_S43_L005_R1_001.fastq.gz 1136_3LU-T1-TDNA-1_A23MHWWLT4_1_S43_L006_R1_001.fastq.gz 1136_3LU-T1-TDNA-1_A23MHWWLT4_1_S43_L007_R1_001.fastq.gz 1136_3LU-T1-TDNA-1_A23MHWWLT4_1_S43_L008_R1_001.fastq.gz > 1136_3LU-T1-TDNA-1_A23MHWWLT4_1_R1.fastq.gz
cat 1136_3LU-T1-TDNA-1_A23MHWWLT4_1_S43_L001_R2_001.fastq.gz 1136_3LU-T1-TDNA-1_A23MHWWLT4_1_S43_L002_R2_001.fastq.gz 1136_3LU-T1-TDNA-1_A23MHWWLT4_1_S43_L003_R2_001.fastq.gz 1136_3LU-T1-TDNA-1_A23MHWWLT4_1_S43_L004_R2_001.fastq.gz 1136_3LU-T1-TDNA-1_A23MHWWLT4_1_S43_L005_R2_001.fastq.gz 1136_3LU-T1-TDNA-1_A23MHWWLT4_1_S43_L006_R2_001.fastq.gz 1136_3LU-T1-TDNA-1_A23MHWWLT4_1_S43_L007_R2_001.fastq.gz 1136_3LU-T1-TDNA-1_A23MHWWLT4_1_S43_L008_R2_001.fastq.gz > 1136_3LU-T1-TDNA-1_A23MHWWLT4_1_R2.fastq.gz

cat <<-END_VERSIONS > versions.yml
"DAQ:CAT_FASTQ":
    cat: $(cat --version | head -1 | awk '{print $NF}')
END_VERSIONS