cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/util sort -r Homo_sapiens_assembly38.fasta -t 31 -o 1136_3MV-T1-TDNA-1_A23MHWWLT4_1.bam --sam2bam - This software is licensed to bgold@natera.com by Sentieon Inc. This software is licensed to bgold@natera.com by Sentieon Inc. version: sentieon-genomics-202308.03 [M::bwa_idx_load_from_disk] read 3171 ALT contigs [M::main_mem] bwa index loaded in 1903.160 CPU sec, 68.888 real sec [M::process] read 681720 sequences (100000107 bp) in 0.992 CPU sec, 1.001 real sec... [M::process] read 678256 sequences (100000135 bp) in 1.332 CPU sec, 1.381 real sec... [M::process] read 678780 sequences (100000165 bp) in 1.594 CPU sec, 1.602 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (39, 282562, 13, 65) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (210, 265, 454) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 942) [M::mem_pestat] mean and std.dev: (265.97, 123.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1186) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (209, 325, 456) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 950) [M::mem_pestat] mean and std.dev: (343.90, 166.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1197) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (117, 586, 1244) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3498) [M::mem_pestat] mean and std.dev: (915.23, 863.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4625) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (283, 408, 473) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 853) [M::mem_pestat] mean and std.dev: (356.21, 144.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1043) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 679552 sequences (100000130 bp) in 1.418 CPU sec, 1.427 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (49, 281107, 11, 43) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (214, 428, 505) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1087) [M::mem_pestat] mean and std.dev: (375.98, 187.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1378) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (230, 354, 485) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 995) [M::mem_pestat] mean and std.dev: (367.91, 171.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1250) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (807, 1089, 7028) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 19470) [M::mem_pestat] mean and std.dev: (3136.73, 3635.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 25691) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (192, 300, 539) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1233) [M::mem_pestat] mean and std.dev: (325.00, 172.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1580) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (48, 281138, 20, 57) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (166, 281, 370) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 778) [M::mem_pestat] mean and std.dev: (272.51, 159.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 982) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (225, 350, 483) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 999) [M::mem_pestat] mean and std.dev: (364.85, 172.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1257) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (129, 251, 2432) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7038) [M::mem_pestat] mean and std.dev: (998.75, 1590.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9341) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (227, 260, 344) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 578) [M::mem_pestat] mean and std.dev: (282.04, 109.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 721) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 681720 reads in 255.086 CPU sec, 8.177 real sec [M::mem_process_seqs] Processed 678256 reads in 171.036 CPU sec, 5.513 real sec [M::mem_process_seqs] Processed 678780 reads in 188.012 CPU sec, 6.068 real sec sorting block 0, #reads = 1074875 mem = 536880021 peak = 596967424 [M::process] read 680672 sequences (100000037 bp) in 2.252 CPU sec, 2.409 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (38, 281539, 11, 51) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (122, 251, 492) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1232) [M::mem_pestat] mean and std.dev: (370.14, 295.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1602) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (221, 344, 477) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 989) [M::mem_pestat] mean and std.dev: (359.62, 171.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1245) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (111, 354, 2599) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7575) [M::mem_pestat] mean and std.dev: (1038.00, 1142.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 10063) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (210, 363, 676) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1608) [M::mem_pestat] mean and std.dev: (396.26, 252.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2074) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 680738 sequences (100000222 bp) in 1.650 CPU sec, 1.655 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (48, 281876, 9, 34) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (237, 334, 440) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 846) [M::mem_pestat] mean and std.dev: (318.67, 134.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1049) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (213, 334, 469) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 981) [M::mem_pestat] mean and std.dev: (352.63, 170.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1237) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (151, 183, 436) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1006) [M::mem_pestat] mean and std.dev: (306.09, 226.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1291) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 679552 reads in 162.029 CPU sec, 5.122 real sec [M::process] read 681440 sequences (100000149 bp) in 1.530 CPU sec, 1.526 real sec... sorting block 1, #reads = 1074640 mem = 536878815 peak = 839188480 [M::mem_process_seqs] Processed 680672 reads in 104.422 CPU sec, 3.294 real sec sorting block 2, #reads = 1075958 mem = 536882750 peak = 895557632 [M::process] read 680864 sequences (100000271 bp) in 1.995 CPU sec, 2.091 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (47, 282504, 8, 42) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (240, 395, 1252) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3276) [M::mem_pestat] mean and std.dev: (652.49, 685.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4288) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (213, 333, 468) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 978) [M::mem_pestat] mean and std.dev: (351.66, 169.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1233) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (230, 332, 576) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1268) [M::mem_pestat] mean and std.dev: (314.14, 147.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1614) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677658 sequences (100000002 bp) in 1.700 CPU sec, 1.702 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (33, 282393, 5, 42) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (324, 459, 1362) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3438) [M::mem_pestat] mean and std.dev: (710.00, 676.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4476) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (211, 329, 463) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 967) [M::mem_pestat] mean and std.dev: (347.89, 168.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1219) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (175, 261, 376) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 778) [M::mem_pestat] mean and std.dev: (293.27, 175.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 997) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 680738 reads in 161.859 CPU sec, 5.147 real sec [M::mem_process_seqs] Processed 681440 reads in 103.574 CPU sec, 3.301 real sec sorting block 3, #reads = 1075965 mem = 536879299 peak = 895557632 [M::process] read 679838 sequences (100000282 bp) in 1.787 CPU sec, 1.916 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (45, 282061, 7, 76) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (181, 286, 831) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2131) [M::mem_pestat] mean and std.dev: (358.08, 320.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2781) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (214, 333, 469) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 979) [M::mem_pestat] mean and std.dev: (352.52, 170.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1234) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (243, 352, 513) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1053) [M::mem_pestat] mean and std.dev: (347.20, 147.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1323) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 681396 sequences (100000064 bp) in 1.350 CPU sec, 1.348 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (51, 281159, 11, 48) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (211, 255, 359) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 655) [M::mem_pestat] mean and std.dev: (272.06, 115.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 803) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (233, 359, 494) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1016) [M::mem_pestat] mean and std.dev: (373.18, 174.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1277) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (1976, 1976, 1976) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1976, 1976) [M::mem_pestat] mean and std.dev: (1976.00, 0.00) [M::mem_pestat] low and high boundaries for proper pairs: (1976, 1976) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (251, 431, 499) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 995) [M::mem_pestat] mean and std.dev: (362.71, 143.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1243) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (50, 281846, 8, 37) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (222, 286, 449) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 903) [M::mem_pestat] mean and std.dev: (307.24, 135.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1130) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (219, 342, 476) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 990) [M::mem_pestat] mean and std.dev: (358.59, 171.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1247) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (193, 348, 453) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 973) [M::mem_pestat] mean and std.dev: (301.39, 151.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1233) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 680864 reads in 229.135 CPU sec, 7.358 real sec [M::mem_process_seqs] Processed 677658 reads in 170.260 CPU sec, 5.495 real sec sorting block 4, #reads = 1076702 mem = 536880326 peak = 895557632 [M::mem_process_seqs] Processed 679838 reads in 185.729 CPU sec, 6.012 real sec sorting block 5, #reads = 1075245 mem = 536884582 peak = 895557632 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (34, 282022, 15, 50) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (156, 311, 729) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1875) [M::mem_pestat] mean and std.dev: (389.74, 320.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2448) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (210, 330, 466) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 978) [M::mem_pestat] mean and std.dev: (350.00, 171.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1234) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (106, 594, 2841) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 8311) [M::mem_pestat] mean and std.dev: (1360.53, 1526.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 11046) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (236, 362, 569) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1235) [M::mem_pestat] mean and std.dev: (348.02, 159.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1568) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 680520 sequences (100000146 bp) in 2.497 CPU sec, 2.745 real sec... [M::mem_process_seqs] Processed 681396 reads in 91.338 CPU sec, 3.024 real sec sorting block 6, #reads = 1077482 mem = 536879971 peak = 895557632 [M::process] read 680540 sequences (100000110 bp) in 2.258 CPU sec, 2.433 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (39, 281719, 8, 58) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (209, 294, 546) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1220) [M::mem_pestat] mean and std.dev: (336.57, 194.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1557) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (215, 336, 471) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 983) [M::mem_pestat] mean and std.dev: (353.83, 170.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1239) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (157, 236, 475) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1111) [M::mem_pestat] mean and std.dev: (322.59, 189.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1429) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 680686 sequences (100000240 bp) in 1.700 CPU sec, 1.692 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (30, 281540, 10, 60) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (172, 275, 869) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2263) [M::mem_pestat] mean and std.dev: (510.21, 468.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2960) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (215, 335, 470) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 980) [M::mem_pestat] mean and std.dev: (353.67, 170.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1235) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (120, 139, 1306) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3678) [M::mem_pestat] mean and std.dev: (781.70, 955.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4864) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (189, 295, 411) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 855) [M::mem_pestat] mean and std.dev: (311.51, 162.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1077) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 679936 sequences (100000076 bp) in 1.250 CPU sec, 1.251 real sec... [M::mem_process_seqs] Processed 680520 reads in 164.565 CPU sec, 5.204 real sec [M::process] read 678428 sequences (100000285 bp) in 1.781 CPU sec, 1.787 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (37, 282278, 9, 36) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (225, 322, 404) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 762) [M::mem_pestat] mean and std.dev: (324.31, 145.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 941) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (213, 332, 468) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 978) [M::mem_pestat] mean and std.dev: (351.52, 170.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1233) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (177, 275, 376) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 774) [M::mem_pestat] mean and std.dev: (280.18, 136.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 973) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 680686 reads in 92.824 CPU sec, 3.138 real sec sorting block 7, #reads = 1076834 mem = 536878766 peak = 895557632 [M::mem_process_seqs] Processed 680540 reads in 216.887 CPU sec, 7.086 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (34, 281603, 18, 35) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (197, 280, 369) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 713) [M::mem_pestat] mean and std.dev: (276.24, 112.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 885) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (216, 334, 468) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 972) [M::mem_pestat] mean and std.dev: (353.00, 169.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1224) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (146, 171, 969) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2615) [M::mem_pestat] mean and std.dev: (460.25, 549.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3438) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (208, 354, 508) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1108) [M::mem_pestat] mean and std.dev: (391.15, 241.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1408) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 680232 sequences (100000080 bp) in 2.412 CPU sec, 2.562 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (59, 280526, 16, 77) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (191, 283, 423) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 887) [M::mem_pestat] mean and std.dev: (290.73, 137.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1119) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (226, 347, 481) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 991) [M::mem_pestat] mean and std.dev: (363.15, 170.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1246) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (155, 2163, 7349) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 21737) [M::mem_pestat] mean and std.dev: (3566.38, 3278.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 28931) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (218, 384, 663) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1553) [M::mem_pestat] mean and std.dev: (399.77, 197.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1998) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 680840 sequences (100000280 bp) in 1.830 CPU sec, 1.824 real sec... [M::mem_process_seqs] Processed 679936 reads in 182.906 CPU sec, 5.816 real sec sorting block 8, #reads = 1075934 mem = 536876826 peak = 895557632 [M::mem_process_seqs] Processed 678428 reads in 108.781 CPU sec, 3.446 real sec sorting block 9, #reads = 1074916 mem = 536881583 peak = 895557632 [M::process] read 678660 sequences (100000216 bp) in 2.220 CPU sec, 2.371 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (38, 281624, 6, 34) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (221, 255, 345) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 593) [M::mem_pestat] mean and std.dev: (249.06, 95.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 717) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (214, 329, 462) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 958) [M::mem_pestat] mean and std.dev: (348.94, 167.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1206) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (201, 301, 433) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 897) [M::mem_pestat] mean and std.dev: (301.29, 153.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1129) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 680064 sequences (100000210 bp) in 1.790 CPU sec, 1.782 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (64, 281655, 7, 47) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (147, 196, 456) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1074) [M::mem_pestat] mean and std.dev: (254.21, 164.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1383) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (211, 327, 460) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 958) [M::mem_pestat] mean and std.dev: (346.74, 167.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1207) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (236, 294, 473) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 947) [M::mem_pestat] mean and std.dev: (334.24, 170.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1184) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 680232 reads in 169.930 CPU sec, 5.410 real sec [M::mem_process_seqs] Processed 680840 reads in 108.223 CPU sec, 3.452 real sec sorting block 10, #reads = 1075279 mem = 536877782 peak = 895557632 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (42, 281047, 18, 45) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (200, 272, 544) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1232) [M::mem_pestat] mean and std.dev: (327.09, 230.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1576) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (224, 346, 479) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 989) [M::mem_pestat] mean and std.dev: (362.19, 170.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1244) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (115, 331, 456) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1138) [M::mem_pestat] mean and std.dev: (302.35, 272.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1479) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (226, 262, 463) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 937) [M::mem_pestat] mean and std.dev: (306.10, 159.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1174) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 679774 sequences (100000061 bp) in 2.604 CPU sec, 2.741 real sec... [M::process] read 680250 sequences (100000013 bp) in 1.820 CPU sec, 1.822 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (45, 281570, 14, 85) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (153, 287, 528) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1278) [M::mem_pestat] mean and std.dev: (314.10, 211.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1653) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (215, 330, 462) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 956) [M::mem_pestat] mean and std.dev: (348.71, 166.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1203) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (249, 485, 560) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1182) [M::mem_pestat] mean and std.dev: (370.82, 181.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1493) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (235, 348, 541) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1153) [M::mem_pestat] mean and std.dev: (348.85, 166.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1459) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 678660 reads in 171.798 CPU sec, 5.468 real sec [M::mem_process_seqs] Processed 680064 reads in 110.219 CPU sec, 3.498 real sec sorting block 11, #reads = 1075221 mem = 536879192 peak = 895557632 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (45, 281331, 10, 56) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (204, 270, 556) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1260) [M::mem_pestat] mean and std.dev: (321.19, 174.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1612) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (215, 331, 461) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 953) [M::mem_pestat] mean and std.dev: (349.11, 166.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1199) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (35, 635, 866) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2528) [M::mem_pestat] mean and std.dev: (477.60, 473.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3359) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (210, 294, 412) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 816) [M::mem_pestat] mean and std.dev: (309.06, 167.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1018) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 678462 sequences (100000073 bp) in 2.625 CPU sec, 2.754 real sec... [M::process] read 678464 sequences (100000260 bp) in 1.730 CPU sec, 1.731 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (50, 281820, 21, 47) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (204, 384, 485) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1047) [M::mem_pestat] mean and std.dev: (320.29, 143.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1328) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (213, 328, 460) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 954) [M::mem_pestat] mean and std.dev: (347.47, 166.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1201) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (39, 2588, 8223) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 24591) [M::mem_pestat] mean and std.dev: (2955.52, 3284.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 32775) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (225, 318, 480) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 990) [M::mem_pestat] mean and std.dev: (317.62, 165.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1245) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 679774 reads in 169.754 CPU sec, 5.401 real sec sorting block 12, #reads = 1076244 mem = 536880668 peak = 895557632 [M::mem_process_seqs] Processed 680250 reads in 109.775 CPU sec, 3.489 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (50, 280843, 14, 46) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (194, 293, 474) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1034) [M::mem_pestat] mean and std.dev: (314.43, 171.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1314) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (223, 341, 472) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 970) [M::mem_pestat] mean and std.dev: (357.72, 168.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1219) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (386, 813, 2405) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6443) [M::mem_pestat] mean and std.dev: (1151.50, 903.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8462) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (170, 284, 319) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 617) [M::mem_pestat] mean and std.dev: (256.42, 121.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 766) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 13, #reads = 1075618 mem = 536883483 peak = 895557632 [M::process] read 680324 sequences (100000020 bp) in 2.483 CPU sec, 2.617 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (52, 280821, 17, 42) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (146, 312, 758) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1982) [M::mem_pestat] mean and std.dev: (418.67, 417.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2594) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (224, 342, 472) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 968) [M::mem_pestat] mean and std.dev: (358.74, 168.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1216) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (345, 685, 1119) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2667) [M::mem_pestat] mean and std.dev: (742.88, 532.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3441) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (205, 333, 567) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1291) [M::mem_pestat] mean and std.dev: (431.03, 339.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1789) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 680262 sequences (100000257 bp) in 1.750 CPU sec, 1.749 real sec... [M::mem_process_seqs] Processed 678462 reads in 161.582 CPU sec, 5.130 real sec [M::mem_process_seqs] Processed 678464 reads in 106.247 CPU sec, 3.365 real sec sorting block 14, #reads = 1075852 mem = 536881916 peak = 895557632 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (29, 281027, 10, 42) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (145, 239, 1014) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2752) [M::mem_pestat] mean and std.dev: (400.31, 437.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3621) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (213, 326, 456) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 942) [M::mem_pestat] mean and std.dev: (345.90, 165.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1185) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (222, 659, 3110) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 8886) [M::mem_pestat] mean and std.dev: (1335.40, 1361.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 11774) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (232, 518, 859) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2113) [M::mem_pestat] mean and std.dev: (509.10, 303.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2740) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 679402 sequences (100000301 bp) in 2.664 CPU sec, 2.810 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (52, 281302, 7, 51) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (233, 327, 526) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1112) [M::mem_pestat] mean and std.dev: (349.26, 174.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1405) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (213, 328, 458) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 948) [M::mem_pestat] mean and std.dev: (346.56, 166.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1193) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (311, 359, 581) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1121) [M::mem_pestat] mean and std.dev: (362.45, 136.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1391) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 679580 sequences (100000202 bp) in 1.780 CPU sec, 1.782 real sec... [M::mem_process_seqs] Processed 680324 reads in 161.135 CPU sec, 5.103 real sec [M::mem_process_seqs] Processed 680262 reads in 105.078 CPU sec, 3.324 real sec sorting block 15, #reads = 1076051 mem = 536883602 peak = 895557632 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (37, 281445, 12, 56) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (276, 490, 834) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1950) [M::mem_pestat] mean and std.dev: (468.38, 274.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2508) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (219, 335, 465) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 957) [M::mem_pestat] mean and std.dev: (352.63, 167.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1203) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (711, 2550, 3126) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7956) [M::mem_pestat] mean and std.dev: (1800.83, 1185.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 10371) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (174, 276, 406) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 870) [M::mem_pestat] mean and std.dev: (301.77, 151.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1102) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 680220 sequences (100000220 bp) in 2.761 CPU sec, 2.937 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (53, 281332, 24, 65) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (224, 318, 493) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1031) [M::mem_pestat] mean and std.dev: (334.48, 173.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1300) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (217, 333, 465) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 961) [M::mem_pestat] mean and std.dev: (352.05, 168.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1209) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (160, 316, 1280) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3520) [M::mem_pestat] mean and std.dev: (593.21, 722.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4640) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (290, 470, 1105) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2735) [M::mem_pestat] mean and std.dev: (453.33, 304.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3550) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 679402 reads in 156.308 CPU sec, 4.943 real sec [M::process] read 679918 sequences (100000000 bp) in 1.867 CPU sec, 1.868 real sec... [M::mem_process_seqs] Processed 679580 reads in 102.186 CPU sec, 3.226 real sec sorting block 16, #reads = 1075562 mem = 536879516 peak = 895557632 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (35, 282180, 21, 43) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (255, 404, 496) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 978) [M::mem_pestat] mean and std.dev: (368.31, 200.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1219) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (215, 333, 466) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 968) [M::mem_pestat] mean and std.dev: (352.01, 169.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1219) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (105, 1765, 2599) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7587) [M::mem_pestat] mean and std.dev: (1440.19, 1164.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 10081) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (207, 400, 853) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2145) [M::mem_pestat] mean and std.dev: (518.16, 388.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2791) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 679190 sequences (100000234 bp) in 2.786 CPU sec, 2.965 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (41, 281985, 15, 42) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (239, 335, 450) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 872) [M::mem_pestat] mean and std.dev: (327.11, 145.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1083) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (216, 334, 468) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 972) [M::mem_pestat] mean and std.dev: (353.20, 169.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1224) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (1200, 2018, 2018) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3654) [M::mem_pestat] mean and std.dev: (1585.13, 626.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4472) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (188, 282, 520) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1184) [M::mem_pestat] mean and std.dev: (288.83, 142.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1516) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 680220 reads in 155.813 CPU sec, 4.938 real sec [M::process] read 680006 sequences (100000121 bp) in 1.961 CPU sec, 1.990 real sec... [M::mem_process_seqs] Processed 679918 reads in 101.285 CPU sec, 3.187 real sec sorting block 17, #reads = 1075250 mem = 536879437 peak = 895557632 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (48, 280954, 9, 47) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (186, 300, 517) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1179) [M::mem_pestat] mean and std.dev: (283.60, 128.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1510) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (219, 338, 472) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 978) [M::mem_pestat] mean and std.dev: (357.09, 171.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1231) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (227, 264, 573) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1265) [M::mem_pestat] mean and std.dev: (349.64, 271.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1611) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 18, #reads = 1076457 mem = 536879420 peak = 895557632 [M::process] read 680500 sequences (100000267 bp) in 2.734 CPU sec, 2.918 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (27, 281515, 13, 45) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (188, 281, 441) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 947) [M::mem_pestat] mean and std.dev: (286.64, 129.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1200) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (217, 336, 466) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 964) [M::mem_pestat] mean and std.dev: (352.99, 168.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1213) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (311, 825, 2609) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7205) [M::mem_pestat] mean and std.dev: (1255.17, 1087.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9503) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (213, 341, 491) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1047) [M::mem_pestat] mean and std.dev: (326.39, 161.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1325) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 679190 reads in 154.053 CPU sec, 4.895 real sec [M::mem_process_seqs] Processed 680006 reads in 100.690 CPU sec, 3.170 real sec [M::process] read 679940 sequences (100000017 bp) in 2.029 CPU sec, 2.065 real sec... sorting block 19, #reads = 1074540 mem = 536878781 peak = 895557632 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (44, 281732, 13, 58) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (215, 265, 986) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2528) [M::mem_pestat] mean and std.dev: (640.60, 752.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3652) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (215, 334, 465) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 965) [M::mem_pestat] mean and std.dev: (352.23, 170.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1215) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (237, 429, 1590) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4296) [M::mem_pestat] mean and std.dev: (1027.92, 1085.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5649) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (172, 253, 354) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 718) [M::mem_pestat] mean and std.dev: (257.55, 101.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 900) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 679096 sequences (100000073 bp) in 2.645 CPU sec, 2.806 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (59, 281574, 18, 45) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (183, 310, 704) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1746) [M::mem_pestat] mean and std.dev: (351.66, 228.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2267) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (218, 337, 469) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 971) [M::mem_pestat] mean and std.dev: (354.75, 170.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1222) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (70, 765, 2633) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7759) [M::mem_pestat] mean and std.dev: (1092.62, 1104.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 10322) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (242, 375, 672) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1532) [M::mem_pestat] mean and std.dev: (497.41, 378.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2011) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 680500 reads in 152.815 CPU sec, 4.855 real sec [M::process] read 680248 sequences (100000017 bp) in 1.880 CPU sec, 1.912 real sec... [M::mem_process_seqs] Processed 679940 reads in 99.273 CPU sec, 3.125 real sec sorting block 20, #reads = 1076636 mem = 536881358 peak = 895557632 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (41, 281402, 14, 58) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (174, 394, 564) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1344) [M::mem_pestat] mean and std.dev: (324.67, 177.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1734) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (224, 348, 480) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 992) [M::mem_pestat] mean and std.dev: (363.35, 173.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1248) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (262, 861, 2707) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7597) [M::mem_pestat] mean and std.dev: (1417.07, 1307.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 10042) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (313, 455, 790) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1744) [M::mem_pestat] mean and std.dev: (562.14, 334.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2221) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 679590 sequences (100000013 bp) in 2.643 CPU sec, 2.799 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (52, 281850, 8, 70) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (180, 276, 341) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 663) [M::mem_pestat] mean and std.dev: (241.87, 99.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 824) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (217, 338, 471) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 979) [M::mem_pestat] mean and std.dev: (355.62, 171.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1233) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (255, 484, 788) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1854) [M::mem_pestat] mean and std.dev: (487.37, 310.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2387) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 679096 reads in 152.195 CPU sec, 4.834 real sec [M::process] read 679492 sequences (100000152 bp) in 1.829 CPU sec, 1.858 real sec... [M::mem_process_seqs] Processed 680248 reads in 99.625 CPU sec, 3.134 real sec sorting block 21, #reads = 1077543 mem = 536879243 peak = 895557632 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (68, 281935, 8, 47) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (152, 293, 348) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 740) [M::mem_pestat] mean and std.dev: (233.88, 105.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 936) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (220, 344, 477) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 991) [M::mem_pestat] mean and std.dev: (360.76, 173.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1248) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (281, 442, 758) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1712) [M::mem_pestat] mean and std.dev: (455.18, 277.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2189) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 680062 sequences (100000152 bp) in 2.675 CPU sec, 2.849 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (50, 281282, 13, 30) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (272, 333, 482) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 902) [M::mem_pestat] mean and std.dev: (365.17, 171.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1112) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (221, 344, 476) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 986) [M::mem_pestat] mean and std.dev: (360.22, 172.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1241) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (101, 1712, 2295) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6683) [M::mem_pestat] mean and std.dev: (1371.85, 1050.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8877) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (235, 336, 527) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1111) [M::mem_pestat] mean and std.dev: (382.28, 218.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1403) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 679590 reads in 150.648 CPU sec, 4.791 real sec sorting block 22, #reads = 1077021 mem = 536879546 peak = 895557632 [M::process] read 679826 sequences (100000028 bp) in 1.663 CPU sec, 1.686 real sec... [M::mem_process_seqs] Processed 679492 reads in 97.653 CPU sec, 3.080 real sec sorting block 23, #reads = 1076916 mem = 536879414 peak = 895557632 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (50, 281926, 4, 42) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (178, 328, 472) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1060) [M::mem_pestat] mean and std.dev: (282.02, 135.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1354) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (216, 336, 468) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 972) [M::mem_pestat] mean and std.dev: (353.96, 170.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1224) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (259, 389, 544) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1114) [M::mem_pestat] mean and std.dev: (336.15, 136.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1399) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 678556 sequences (100000158 bp) in 2.290 CPU sec, 2.427 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (33, 281505, 4, 69) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (213, 262, 474) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 996) [M::mem_pestat] mean and std.dev: (318.83, 168.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1257) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (219, 340, 475) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 987) [M::mem_pestat] mean and std.dev: (358.28, 173.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1243) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (243, 355, 410) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 744) [M::mem_pestat] mean and std.dev: (326.71, 101.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 911) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 680216 sequences (100000215 bp) in 1.390 CPU sec, 1.384 real sec... [M::mem_process_seqs] Processed 680062 reads in 148.531 CPU sec, 4.726 real sec [M::mem_process_seqs] Processed 679826 reads in 96.776 CPU sec, 3.069 real sec sorting block 24, #reads = 1077921 mem = 536879700 peak = 895557632 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (48, 281341, 15, 30) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (155, 270, 404) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 902) [M::mem_pestat] mean and std.dev: (257.62, 115.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1151) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (227, 351, 482) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 992) [M::mem_pestat] mean and std.dev: (365.84, 173.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1247) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (2420, 2745, 9012) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 22196) [M::mem_pestat] mean and std.dev: (4095.93, 3070.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 28788) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (225, 288, 346) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 588) [M::mem_pestat] mean and std.dev: (273.07, 74.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 709) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 680484 sequences (100000213 bp) in 2.768 CPU sec, 2.950 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (61, 281424, 7, 38) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (284, 519, 893) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2111) [M::mem_pestat] mean and std.dev: (602.03, 431.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2720) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (217, 338, 471) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 979) [M::mem_pestat] mean and std.dev: (355.63, 171.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1233) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (175, 349, 496) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1138) [M::mem_pestat] mean and std.dev: (335.74, 214.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1459) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 678556 reads in 150.423 CPU sec, 4.761 real sec [M::process] read 680096 sequences (100000027 bp) in 1.837 CPU sec, 1.847 real sec... [M::mem_process_seqs] Processed 680216 reads in 99.117 CPU sec, 3.126 real sec sorting block 25, #reads = 1076320 mem = 536884599 peak = 895557632 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (42, 282700, 3, 60) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (138, 330, 416) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 972) [M::mem_pestat] mean and std.dev: (295.47, 201.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1250) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (216, 337, 471) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 981) [M::mem_pestat] mean and std.dev: (355.23, 172.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1236) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (255, 326, 627) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1371) [M::mem_pestat] mean and std.dev: (368.33, 231.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1743) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 680124 sequences (100000245 bp) in 2.645 CPU sec, 2.773 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (32, 281998, 15, 46) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (185, 253, 415) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 875) [M::mem_pestat] mean and std.dev: (220.00, 79.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1105) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (218, 338, 471) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 977) [M::mem_pestat] mean and std.dev: (356.06, 171.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1230) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (189, 629, 1061) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2805) [M::mem_pestat] mean and std.dev: (638.93, 558.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3677) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (295, 392, 961) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2293) [M::mem_pestat] mean and std.dev: (566.10, 527.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2959) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 680014 sequences (100000172 bp) in 1.720 CPU sec, 1.722 real sec... [M::mem_process_seqs] Processed 680484 reads in 152.076 CPU sec, 4.813 real sec sorting block 26, #reads = 1077379 mem = 536878756 peak = 895557632 [M::mem_process_seqs] Processed 680096 reads in 99.214 CPU sec, 3.133 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (50, 282741, 13, 48) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (185, 303, 362) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 716) [M::mem_pestat] mean and std.dev: (242.53, 98.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 893) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (217, 337, 470) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 976) [M::mem_pestat] mean and std.dev: (355.38, 171.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1229) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (240, 240, 1377) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3651) [M::mem_pestat] mean and std.dev: (594.23, 572.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4788) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (213, 319, 487) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1035) [M::mem_pestat] mean and std.dev: (311.38, 111.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1309) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 678976 sequences (100000200 bp) in 2.498 CPU sec, 2.686 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (22, 282200, 13, 43) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (132, 285, 2975) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 8661) [M::mem_pestat] mean and std.dev: (1655.27, 2486.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 11603) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (217, 339, 472) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 982) [M::mem_pestat] mean and std.dev: (356.56, 172.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1237) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (4, 4, 1194) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3574) [M::mem_pestat] mean and std.dev: (393.50, 548.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4764) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (257, 396, 465) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 881) [M::mem_pestat] mean and std.dev: (343.03, 126.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1089) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 677414 sequences (100000071 bp) in 1.440 CPU sec, 1.431 real sec... [M::mem_process_seqs] Processed 680124 reads in 153.610 CPU sec, 4.884 real sec sorting block 27, #reads = 1077481 mem = 536880828 peak = 895557632 [M::mem_process_seqs] Processed 680014 reads in 98.968 CPU sec, 3.135 real sec sorting block 28, #reads = 1077878 mem = 536877150 peak = 904241152 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (45, 281275, 15, 59) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (260, 375, 798) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1874) [M::mem_pestat] mean and std.dev: (473.68, 355.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2412) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (221, 340, 471) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 971) [M::mem_pestat] mean and std.dev: (357.82, 170.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1221) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (87, 686, 955) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2691) [M::mem_pestat] mean and std.dev: (527.87, 386.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3559) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (217, 326, 649) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1513) [M::mem_pestat] mean and std.dev: (435.84, 284.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1945) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 679750 sequences (100000113 bp) in 2.619 CPU sec, 2.777 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (55, 280324, 6, 47) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (165, 216, 297) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 561) [M::mem_pestat] mean and std.dev: (234.83, 90.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 693) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (234, 357, 489) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 999) [M::mem_pestat] mean and std.dev: (372.26, 174.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1254) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (149, 203, 472) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1118) [M::mem_pestat] mean and std.dev: (317.52, 248.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1441) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 680180 sequences (100000014 bp) in 1.518 CPU sec, 1.517 real sec... [M::mem_process_seqs] Processed 678976 reads in 150.616 CPU sec, 4.778 real sec [M::mem_process_seqs] Processed 677414 reads in 96.698 CPU sec, 3.054 real sec sorting block 29, #reads = 1076454 mem = 536879348 peak = 904241152 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (44, 281647, 15, 48) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (172, 286, 448) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1000) [M::mem_pestat] mean and std.dev: (314.23, 197.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1276) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (218, 336, 468) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 968) [M::mem_pestat] mean and std.dev: (354.59, 170.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1218) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (247, 913, 1725) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4681) [M::mem_pestat] mean and std.dev: (907.64, 1037.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6159) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (173, 248, 387) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 815) [M::mem_pestat] mean and std.dev: (279.70, 126.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1029) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 679630 sequences (100000270 bp) in 2.252 CPU sec, 2.416 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (43, 281617, 5, 66) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (225, 282, 711) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1683) [M::mem_pestat] mean and std.dev: (433.62, 393.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2169) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (215, 332, 465) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 965) [M::mem_pestat] mean and std.dev: (351.33, 169.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1215) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (238, 348, 480) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 964) [M::mem_pestat] mean and std.dev: (371.30, 213.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1226) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 680278 sequences (100000036 bp) in 1.770 CPU sec, 1.775 real sec... [M::mem_process_seqs] Processed 679750 reads in 148.951 CPU sec, 4.725 real sec [M::mem_process_seqs] Processed 680180 reads in 96.771 CPU sec, 3.063 real sec sorting block 30, #reads = 1075471 mem = 536889140 peak = 904241152 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (48, 281353, 12, 48) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (275, 326, 572) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1166) [M::mem_pestat] mean and std.dev: (379.40, 205.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1463) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (218, 338, 475) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 989) [M::mem_pestat] mean and std.dev: (358.09, 173.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1246) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (361, 1453, 6706) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 19396) [M::mem_pestat] mean and std.dev: (2167.92, 2668.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 25741) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (270, 333, 503) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 969) [M::mem_pestat] mean and std.dev: (337.56, 156.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1202) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 680338 sequences (100000129 bp) in 2.743 CPU sec, 2.900 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (39, 282301, 13, 53) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (176, 284, 388) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 812) [M::mem_pestat] mean and std.dev: (315.23, 159.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1024) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (214, 333, 469) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 979) [M::mem_pestat] mean and std.dev: (353.61, 172.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1234) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (282, 482, 853) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1995) [M::mem_pestat] mean and std.dev: (552.92, 328.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2566) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (198, 433, 2087) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5865) [M::mem_pestat] mean and std.dev: (835.94, 1096.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7754) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 679630 reads in 150.994 CPU sec, 4.787 real sec [M::process] read 680300 sequences (100000146 bp) in 1.999 CPU sec, 2.030 real sec... [M::mem_process_seqs] Processed 680278 reads in 100.361 CPU sec, 3.157 real sec sorting block 31, #reads = 1076264 mem = 536877949 peak = 904241152 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (45, 281726, 9, 54) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (266, 411, 646) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1406) [M::mem_pestat] mean and std.dev: (417.41, 208.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1786) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (214, 333, 468) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 976) [M::mem_pestat] mean and std.dev: (353.44, 172.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1230) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (226, 283, 423) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 817) [M::mem_pestat] mean and std.dev: (299.43, 115.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1014) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 32, #reads = 1077246 mem = 536879936 peak = 904241152 [M::process] read 678292 sequences (100000287 bp) in 2.750 CPU sec, 2.932 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (54, 281357, 7, 40) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (165, 210, 339) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 687) [M::mem_pestat] mean and std.dev: (223.83, 89.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 861) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (213, 327, 458) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 948) [M::mem_pestat] mean and std.dev: (347.57, 168.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1193) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (208, 260, 395) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 769) [M::mem_pestat] mean and std.dev: (281.31, 134.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 956) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 680338 reads in 161.978 CPU sec, 5.160 real sec [M::process] read 678948 sequences (100000216 bp) in 2.005 CPU sec, 2.032 real sec... [M::mem_process_seqs] Processed 680300 reads in 110.175 CPU sec, 3.474 real sec sorting block 33, #reads = 1077594 mem = 536877610 peak = 904241152 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (29, 280882, 8, 47) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (309, 440, 1713) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4521) [M::mem_pestat] mean and std.dev: (655.58, 659.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5925) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (225, 345, 476) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 978) [M::mem_pestat] mean and std.dev: (362.07, 171.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1229) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (244, 354, 438) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 826) [M::mem_pestat] mean and std.dev: (333.00, 152.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1020) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 680316 sequences (100000276 bp) in 2.578 CPU sec, 2.712 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (46, 281967, 5, 40) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (223, 337, 447) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 895) [M::mem_pestat] mean and std.dev: (309.45, 114.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1119) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (221, 338, 471) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 971) [M::mem_pestat] mean and std.dev: (357.33, 170.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1221) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (196, 283, 689) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1675) [M::mem_pestat] mean and std.dev: (390.70, 280.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2168) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 680146 sequences (100000049 bp) in 1.705 CPU sec, 1.709 real sec... [M::mem_process_seqs] Processed 678292 reads in 166.919 CPU sec, 5.316 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (54, 282170, 16, 53) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (216, 349, 484) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1020) [M::mem_pestat] mean and std.dev: (325.11, 160.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1288) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (213, 329, 461) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 957) [M::mem_pestat] mean and std.dev: (349.25, 169.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1205) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (409, 567, 1532) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3778) [M::mem_pestat] mean and std.dev: (693.36, 498.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4901) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (214, 263, 519) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1129) [M::mem_pestat] mean and std.dev: (360.30, 222.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1434) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 680264 sequences (100000172 bp) in 2.222 CPU sec, 2.231 real sec... [M::mem_process_seqs] Processed 680316 reads in 96.005 CPU sec, 3.225 real sec sorting block 34, #reads = 1074791 mem = 536879206 peak = 904241152 [M::mem_process_seqs] Processed 678948 reads in 231.435 CPU sec, 7.527 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (64, 281704, 20, 50) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (240, 301, 660) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1500) [M::mem_pestat] mean and std.dev: (405.70, 248.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1920) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (214, 330, 462) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 958) [M::mem_pestat] mean and std.dev: (350.10, 169.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1206) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (153, 641, 2403) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6903) [M::mem_pestat] mean and std.dev: (1026.65, 1125.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9153) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (256, 538, 962) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2374) [M::mem_pestat] mean and std.dev: (534.62, 389.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3080) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 35, #reads = 1076032 mem = 536878525 peak = 961642496 [M::process] read 680098 sequences (100000145 bp) in 3.178 CPU sec, 3.365 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (26, 281536, 11, 62) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (174, 245, 492) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1128) [M::mem_pestat] mean and std.dev: (364.27, 263.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1446) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (214, 330, 461) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 955) [M::mem_pestat] mean and std.dev: (349.65, 169.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1202) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (254, 262, 1076) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2720) [M::mem_pestat] mean and std.dev: (480.20, 451.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3542) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (211, 321, 408) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 802) [M::mem_pestat] mean and std.dev: (275.10, 100.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 999) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 680146 reads in 179.357 CPU sec, 5.697 real sec [M::mem_process_seqs] Processed 680264 reads in 105.435 CPU sec, 3.331 real sec [M::process] read 680924 sequences (100000163 bp) in 2.507 CPU sec, 2.648 real sec... sorting block 36, #reads = 1076547 mem = 536877295 peak = 961642496 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (36, 281675, 10, 61) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (150, 203, 321) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 663) [M::mem_pestat] mean and std.dev: (216.09, 92.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 834) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (214, 330, 462) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 958) [M::mem_pestat] mean and std.dev: (349.85, 168.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1206) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (240, 799, 1620) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4380) [M::mem_pestat] mean and std.dev: (862.78, 813.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5760) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (171, 282, 441) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 981) [M::mem_pestat] mean and std.dev: (308.93, 187.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1251) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 680656 sequences (100000014 bp) in 2.420 CPU sec, 2.555 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (47, 281986, 15, 40) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (168, 243, 361) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 747) [M::mem_pestat] mean and std.dev: (264.49, 126.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 940) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (213, 330, 465) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 969) [M::mem_pestat] mean and std.dev: (350.47, 170.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1221) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (172, 497, 4810) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 14086) [M::mem_pestat] mean and std.dev: (1558.27, 1976.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 18724) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (187, 234, 439) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 943) [M::mem_pestat] mean and std.dev: (276.59, 177.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1195) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 680098 reads in 160.295 CPU sec, 5.092 real sec [M::mem_process_seqs] Processed 680924 reads in 106.212 CPU sec, 3.344 real sec [M::process] read 680532 sequences (100000025 bp) in 2.312 CPU sec, 2.409 real sec... sorting block 37, #reads = 1075941 mem = 536883710 peak = 961642496 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (38, 282386, 11, 51) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (262, 346, 540) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1096) [M::mem_pestat] mean and std.dev: (317.74, 128.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1374) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (213, 331, 466) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 972) [M::mem_pestat] mean and std.dev: (351.59, 171.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1225) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (472, 472, 1822) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4522) [M::mem_pestat] mean and std.dev: (1084.27, 1233.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6020) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (220, 293, 466) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 958) [M::mem_pestat] mean and std.dev: (325.70, 157.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1204) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 681940 sequences (100000096 bp) in 2.649 CPU sec, 2.789 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (57, 281722, 13, 45) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (214, 293, 552) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1228) [M::mem_pestat] mean and std.dev: (351.72, 226.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1566) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (212, 328, 462) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 962) [M::mem_pestat] mean and std.dev: (348.67, 169.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1212) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (252, 457, 670) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1506) [M::mem_pestat] mean and std.dev: (359.91, 205.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1924) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (214, 292, 393) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 751) [M::mem_pestat] mean and std.dev: (300.65, 119.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 930) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 680656 reads in 158.427 CPU sec, 5.041 real sec [M::mem_process_seqs] Processed 680532 reads in 106.359 CPU sec, 3.349 real sec sorting block 38, #reads = 1075898 mem = 536879458 peak = 961642496 [M::process] read 680968 sequences (100000238 bp) in 2.222 CPU sec, 2.287 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (33, 283065, 17, 74) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (189, 269, 608) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1446) [M::mem_pestat] mean and std.dev: (291.18, 176.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1865) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (208, 322, 450) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 934) [M::mem_pestat] mean and std.dev: (340.32, 163.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1176) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (917, 1366, 2757) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6437) [M::mem_pestat] mean and std.dev: (1851.88, 1059.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8277) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (181, 392, 498) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1132) [M::mem_pestat] mean and std.dev: (371.66, 213.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1449) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 39, #reads = 1075020 mem = 536878338 peak = 961642496 [M::process] read 681522 sequences (100000039 bp) in 2.215 CPU sec, 2.346 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (54, 281567, 9, 46) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (204, 379, 436) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 900) [M::mem_pestat] mean and std.dev: (319.40, 141.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1132) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (213, 329, 454) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 936) [M::mem_pestat] mean and std.dev: (344.17, 162.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1177) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (160, 318, 367) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 781) [M::mem_pestat] mean and std.dev: (292.96, 127.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 988) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 680722 sequences (100000038 bp) in 1.815 CPU sec, 1.839 real sec... [M::mem_process_seqs] Processed 681940 reads in 171.682 CPU sec, 5.497 real sec [M::mem_process_seqs] Processed 680968 reads in 113.855 CPU sec, 3.638 real sec sorting block 40, #reads = 1075066 mem = 536878094 peak = 961642496 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (53, 281796, 16, 59) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (183, 328, 568) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1338) [M::mem_pestat] mean and std.dev: (359.22, 244.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1723) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (211, 327, 453) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 937) [M::mem_pestat] mean and std.dev: (342.73, 163.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1179) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (695, 731, 1898) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4304) [M::mem_pestat] mean and std.dev: (1194.06, 989.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5507) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (251, 262, 488) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 962) [M::mem_pestat] mean and std.dev: (300.96, 142.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1199) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 680294 sequences (100000164 bp) in 2.880 CPU sec, 3.112 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (41, 282614, 1, 66) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (245, 408, 607) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1331) [M::mem_pestat] mean and std.dev: (376.47, 200.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1693) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (214, 331, 457) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 943) [M::mem_pestat] mean and std.dev: (346.59, 163.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1186) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (255, 420, 560) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1170) [M::mem_pestat] mean and std.dev: (406.82, 184.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1475) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 681522 reads in 173.999 CPU sec, 5.627 real sec [M::process] read 679738 sequences (100000271 bp) in 1.615 CPU sec, 1.700 real sec... [M::mem_process_seqs] Processed 680722 reads in 114.641 CPU sec, 3.697 real sec sorting block 41, #reads = 1074959 mem = 536884015 peak = 961642496 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (48, 281800, 5, 61) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (236, 368, 951) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2381) [M::mem_pestat] mean and std.dev: (631.08, 454.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3096) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (216, 333, 458) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 942) [M::mem_pestat] mean and std.dev: (347.75, 163.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1184) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (176, 306, 584) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1400) [M::mem_pestat] mean and std.dev: (379.05, 224.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1808) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677924 sequences (100000025 bp) in 2.656 CPU sec, 3.094 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (43, 281278, 6, 33) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (228, 334, 1430) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3834) [M::mem_pestat] mean and std.dev: (592.97, 566.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5036) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (217, 338, 467) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 967) [M::mem_pestat] mean and std.dev: (353.32, 167.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1217) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (156, 288, 450) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1038) [M::mem_pestat] mean and std.dev: (297.58, 167.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1332) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 680294 reads in 173.490 CPU sec, 5.606 real sec [M::process] read 678830 sequences (100000018 bp) in 1.882 CPU sec, 1.898 real sec... [M::mem_process_seqs] Processed 679738 reads in 116.357 CPU sec, 3.744 real sec sorting block 42, #reads = 1076423 mem = 536879306 peak = 961642496 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (23, 281030, 8, 63) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (208, 221, 324) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 556) [M::mem_pestat] mean and std.dev: (239.73, 99.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 672) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (232, 358, 486) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 994) [M::mem_pestat] mean and std.dev: (369.44, 171.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1248) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (230, 272, 392) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 716) [M::mem_pestat] mean and std.dev: (292.90, 108.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 878) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 680788 sequences (100000153 bp) in 2.579 CPU sec, 2.855 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (29, 281356, 8, 59) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (193, 306, 803) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2023) [M::mem_pestat] mean and std.dev: (475.59, 371.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2633) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (225, 347, 475) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 975) [M::mem_pestat] mean and std.dev: (360.58, 168.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1225) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (270, 395, 607) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1281) [M::mem_pestat] mean and std.dev: (463.76, 224.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1618) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 677924 reads in 172.862 CPU sec, 5.609 real sec [M::process] read 680912 sequences (100000219 bp) in 1.641 CPU sec, 1.687 real sec... sorting block 43, #reads = 1075692 mem = 536879292 peak = 961642496 [M::mem_process_seqs] Processed 678830 reads in 113.228 CPU sec, 3.660 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (32, 282252, 12, 36) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (201, 400, 632) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1494) [M::mem_pestat] mean and std.dev: (340.67, 181.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1925) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (212, 329, 458) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 950) [M::mem_pestat] mean and std.dev: (346.96, 166.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1196) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (137, 2452, 2601) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7529) [M::mem_pestat] mean and std.dev: (1658.42, 1371.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9993) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (236, 326, 463) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 917) [M::mem_pestat] mean and std.dev: (330.15, 155.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1144) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 44, #reads = 1075215 mem = 536880950 peak = 990425088 [M::process] read 680528 sequences (100000255 bp) in 2.809 CPU sec, 3.098 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (32, 282291, 21, 44) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (203, 231, 301) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (7, 497) [M::mem_pestat] mean and std.dev: (235.53, 97.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 626) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (213, 333, 464) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 966) [M::mem_pestat] mean and std.dev: (350.51, 168.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1217) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (297, 725, 4006) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 11424) [M::mem_pestat] mean and std.dev: (1449.48, 1483.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 15133) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (221, 319, 450) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 908) [M::mem_pestat] mean and std.dev: (331.43, 175.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1137) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 680606 sequences (100000037 bp) in 1.846 CPU sec, 1.852 real sec... [M::mem_process_seqs] Processed 680788 reads in 175.222 CPU sec, 5.791 real sec [M::mem_process_seqs] Processed 680912 reads in 114.639 CPU sec, 3.837 real sec sorting block 45, #reads = 1076509 mem = 536877926 peak = 990425088 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (34, 281833, 8, 54) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (149, 210, 472) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1118) [M::mem_pestat] mean and std.dev: (317.52, 239.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1441) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (215, 334, 463) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 959) [M::mem_pestat] mean and std.dev: (350.25, 167.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1207) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (257, 400, 464) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 878) [M::mem_pestat] mean and std.dev: (347.11, 132.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1085) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 680400 sequences (100000178 bp) in 2.817 CPU sec, 3.183 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (49, 282078, 8, 65) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (220, 282, 441) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 883) [M::mem_pestat] mean and std.dev: (277.55, 113.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1104) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (215, 333, 463) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 959) [M::mem_pestat] mean and std.dev: (349.45, 166.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1207) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (207, 343, 548) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1230) [M::mem_pestat] mean and std.dev: (347.19, 188.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1571) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 680528 reads in 173.904 CPU sec, 5.645 real sec [M::process] read 680408 sequences (100000281 bp) in 1.756 CPU sec, 1.856 real sec... [M::mem_process_seqs] Processed 680606 reads in 114.634 CPU sec, 3.729 real sec sorting block 46, #reads = 1077326 mem = 536884971 peak = 990425088 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (47, 281728, 8, 50) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (178, 294, 732) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1840) [M::mem_pestat] mean and std.dev: (337.21, 231.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2394) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (215, 333, 462) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 956) [M::mem_pestat] mean and std.dev: (350.16, 167.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1203) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (195, 314, 413) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 849) [M::mem_pestat] mean and std.dev: (298.81, 157.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1067) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 680240 sequences (100000212 bp) in 2.704 CPU sec, 3.073 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (43, 281931, 11, 53) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (163, 401, 864) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2266) [M::mem_pestat] mean and std.dev: (552.17, 464.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2967) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (216, 335, 468) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 972) [M::mem_pestat] mean and std.dev: (352.69, 169.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1224) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (623, 770, 2003) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4763) [M::mem_pestat] mean and std.dev: (745.56, 481.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6143) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (191, 306, 417) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 869) [M::mem_pestat] mean and std.dev: (321.21, 163.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1095) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 680400 reads in 176.879 CPU sec, 5.723 real sec [M::process] read 678290 sequences (100000117 bp) in 1.997 CPU sec, 2.023 real sec... [M::mem_process_seqs] Processed 680408 reads in 117.197 CPU sec, 3.795 real sec sorting block 47, #reads = 1076996 mem = 536881283 peak = 990425088 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (44, 282059, 5, 58) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (157, 206, 403) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 895) [M::mem_pestat] mean and std.dev: (295.11, 202.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1141) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (216, 337, 470) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 978) [M::mem_pestat] mean and std.dev: (354.43, 170.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1232) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (180, 268, 351) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 693) [M::mem_pestat] mean and std.dev: (269.57, 135.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 864) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 678212 sequences (100000180 bp) in 2.618 CPU sec, 3.214 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (65, 280382, 18, 78) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (236, 307, 557) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1199) [M::mem_pestat] mean and std.dev: (369.15, 190.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1520) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (228, 349, 478) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 978) [M::mem_pestat] mean and std.dev: (362.85, 169.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1228) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (280, 350, 1376) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3568) [M::mem_pestat] mean and std.dev: (638.76, 565.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4664) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (206, 263, 359) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 665) [M::mem_pestat] mean and std.dev: (273.62, 124.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 818) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 680240 reads in 176.667 CPU sec, 5.963 real sec sorting block 48, #reads = 1077221 mem = 536880767 peak = 990425088 [M::mem_process_seqs] Processed 678290 reads in 117.174 CPU sec, 3.839 real sec [M::process] read 680130 sequences (100000061 bp) in 2.001 CPU sec, 2.355 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (49, 281244, 17, 47) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (188, 253, 403) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 833) [M::mem_pestat] mean and std.dev: (261.26, 108.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1048) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (229, 351, 479) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 979) [M::mem_pestat] mean and std.dev: (364.68, 169.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1229) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (2, 34, 651) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1949) [M::mem_pestat] mean and std.dev: (197.44, 258.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2598) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (268, 310, 594) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1246) [M::mem_pestat] mean and std.dev: (408.91, 199.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1572) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 49, #reads = 1075054 mem = 536879403 peak = 990425088 [M::process] read 680030 sequences (100000011 bp) in 2.519 CPU sec, 2.982 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (43, 281378, 10, 53) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (158, 257, 506) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1202) [M::mem_pestat] mean and std.dev: (347.58, 257.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1550) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (216, 333, 463) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 957) [M::mem_pestat] mean and std.dev: (350.41, 167.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1204) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (918, 918, 2076) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4392) [M::mem_pestat] mean and std.dev: (1233.56, 944.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5550) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (247, 314, 475) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 931) [M::mem_pestat] mean and std.dev: (313.45, 150.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1159) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 678212 reads in 174.286 CPU sec, 5.835 real sec [M::mem_process_seqs] Processed 680130 reads in 117.189 CPU sec, 3.883 real sec [M::process] read 679862 sequences (100000205 bp) in 2.168 CPU sec, 2.590 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (42, 281164, 7, 41) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (171, 288, 552) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1314) [M::mem_pestat] mean and std.dev: (364.24, 270.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1695) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (216, 335, 468) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 972) [M::mem_pestat] mean and std.dev: (353.42, 169.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1224) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (182, 265, 443) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 965) [M::mem_pestat] mean and std.dev: (309.79, 178.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1226) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 50, #reads = 1075902 mem = 536879516 peak = 990425088 [M::process] read 679850 sequences (100000001 bp) in 2.521 CPU sec, 3.240 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (41, 281367, 23, 44) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (144, 218, 472) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1128) [M::mem_pestat] mean and std.dev: (286.86, 261.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1456) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (216, 334, 467) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 969) [M::mem_pestat] mean and std.dev: (353.00, 169.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1220) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (485, 664, 1555) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3695) [M::mem_pestat] mean and std.dev: (786.59, 534.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4765) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (196, 323, 463) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 997) [M::mem_pestat] mean and std.dev: (334.27, 185.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1264) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 680030 reads in 180.463 CPU sec, 6.101 real sec [M::mem_process_seqs] Processed 679862 reads in 119.142 CPU sec, 4.013 real sec [M::process] read 680226 sequences (100000155 bp) in 2.229 CPU sec, 2.377 real sec... sorting block 51, #reads = 1075156 mem = 536878357 peak = 990425088 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (29, 281470, 10, 46) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (139, 247, 462) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1108) [M::mem_pestat] mean and std.dev: (307.89, 206.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1431) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (216, 333, 466) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 966) [M::mem_pestat] mean and std.dev: (352.09, 169.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1216) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (125, 1620, 3444) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 10082) [M::mem_pestat] mean and std.dev: (1957.10, 2253.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 13401) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (186, 272, 729) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1815) [M::mem_pestat] mean and std.dev: (387.43, 274.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2358) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 680254 sequences (100000170 bp) in 2.433 CPU sec, 2.993 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (68, 281178, 11, 39) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (223, 309, 501) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1057) [M::mem_pestat] mean and std.dev: (348.38, 215.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1335) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (215, 332, 464) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 962) [M::mem_pestat] mean and std.dev: (351.31, 169.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1211) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (226, 540, 1170) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3058) [M::mem_pestat] mean and std.dev: (864.18, 773.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4002) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (218, 358, 401) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 767) [M::mem_pestat] mean and std.dev: (313.78, 117.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 950) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 679850 reads in 180.719 CPU sec, 5.834 real sec [M::mem_process_seqs] Processed 680226 reads in 118.623 CPU sec, 3.787 real sec sorting block 52, #reads = 1076300 mem = 536880091 peak = 990425088 [M::process] read 680278 sequences (100000268 bp) in 2.132 CPU sec, 2.213 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (55, 280810, 8, 39) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (188, 288, 1227) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3305) [M::mem_pestat] mean and std.dev: (599.77, 664.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4344) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (213, 327, 457) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 945) [M::mem_pestat] mean and std.dev: (346.61, 166.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1189) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (208, 288, 495) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1069) [M::mem_pestat] mean and std.dev: (352.13, 197.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1356) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 53, #reads = 1075794 mem = 536878567 peak = 990425088 [M::process] read 680244 sequences (100000022 bp) in 2.890 CPU sec, 3.288 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (35, 281312, 8, 47) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (170, 384, 720) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1820) [M::mem_pestat] mean and std.dev: (430.91, 295.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2370) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (213, 329, 462) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 960) [M::mem_pestat] mean and std.dev: (349.62, 169.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1209) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (150, 267, 413) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 939) [M::mem_pestat] mean and std.dev: (263.38, 133.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1202) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 680254 reads in 178.918 CPU sec, 5.735 real sec [M::process] read 680526 sequences (100000013 bp) in 1.953 CPU sec, 1.993 real sec... [M::mem_process_seqs] Processed 680278 reads in 118.711 CPU sec, 3.752 real sec sorting block 54, #reads = 1075473 mem = 536880994 peak = 990425088 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (49, 280958, 24, 81) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (189, 241, 471) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1035) [M::mem_pestat] mean and std.dev: (269.27, 141.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1317) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (213, 327, 459) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 951) [M::mem_pestat] mean and std.dev: (347.64, 167.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1197) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (168, 231, 1663) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4653) [M::mem_pestat] mean and std.dev: (583.10, 704.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6148) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (301, 388, 517) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 949) [M::mem_pestat] mean and std.dev: (362.26, 125.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1165) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 680258 sequences (100000266 bp) in 2.622 CPU sec, 2.837 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (31, 281758, 9, 47) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (270, 339, 3046) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 8598) [M::mem_pestat] mean and std.dev: (1278.87, 1497.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 11374) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (213, 328, 460) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 954) [M::mem_pestat] mean and std.dev: (348.00, 168.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1201) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (232, 435, 620) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1396) [M::mem_pestat] mean and std.dev: (428.33, 273.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1784) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 680108 sequences (100000247 bp) in 1.780 CPU sec, 1.782 real sec... [M::mem_process_seqs] Processed 680244 reads in 175.700 CPU sec, 5.607 real sec [M::mem_process_seqs] Processed 680526 reads in 113.937 CPU sec, 3.618 real sec sorting block 55, #reads = 1076507 mem = 536882279 peak = 990425088 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (25, 281623, 10, 33) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (177, 288, 391) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 819) [M::mem_pestat] mean and std.dev: (321.32, 187.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1070) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (214, 329, 460) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 952) [M::mem_pestat] mean and std.dev: (348.84, 168.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1198) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (725, 3774, 9719) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 27707) [M::mem_pestat] mean and std.dev: (4698.10, 4189.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 36701) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (246, 340, 597) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1299) [M::mem_pestat] mean and std.dev: (381.35, 186.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1650) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 680488 sequences (100000197 bp) in 2.789 CPU sec, 2.928 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (56, 281390, 7, 58) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (170, 277, 622) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1526) [M::mem_pestat] mean and std.dev: (355.52, 267.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1978) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (214, 331, 464) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 964) [M::mem_pestat] mean and std.dev: (350.29, 169.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1214) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (260, 356, 462) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 866) [M::mem_pestat] mean and std.dev: (335.74, 137.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1068) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 680162 sequences (100000020 bp) in 1.861 CPU sec, 1.869 real sec... [M::mem_process_seqs] Processed 680258 reads in 172.592 CPU sec, 5.479 real sec [M::mem_process_seqs] Processed 680108 reads in 112.503 CPU sec, 3.556 real sec sorting block 56, #reads = 1076824 mem = 536878034 peak = 990425088 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (31, 281887, 12, 51) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (138, 246, 435) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1029) [M::mem_pestat] mean and std.dev: (265.86, 154.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1326) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (212, 329, 464) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 968) [M::mem_pestat] mean and std.dev: (350.09, 170.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1220) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (877, 1114, 2211) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4879) [M::mem_pestat] mean and std.dev: (1265.17, 775.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6213) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (267, 316, 554) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1128) [M::mem_pestat] mean and std.dev: (338.05, 168.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1415) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 680756 sequences (100000044 bp) in 3.055 CPU sec, 3.194 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (47, 281722, 16, 33) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (217, 299, 401) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 769) [M::mem_pestat] mean and std.dev: (291.79, 104.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 953) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (214, 332, 464) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 964) [M::mem_pestat] mean and std.dev: (351.00, 169.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1214) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (386, 587, 2062) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5414) [M::mem_pestat] mean and std.dev: (1020.12, 961.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7090) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (194, 301, 383) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 761) [M::mem_pestat] mean and std.dev: (276.28, 122.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 950) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 680894 sequences (100000183 bp) in 1.890 CPU sec, 1.891 real sec... [M::mem_process_seqs] Processed 680488 reads in 177.655 CPU sec, 5.647 real sec sorting block 57, #reads = 1077754 mem = 536880513 peak = 990425088 [M::mem_process_seqs] Processed 680162 reads in 118.214 CPU sec, 3.738 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (44, 282421, 4, 45) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (157, 293, 519) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1243) [M::mem_pestat] mean and std.dev: (313.70, 188.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1605) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (211, 327, 463) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 967) [M::mem_pestat] mean and std.dev: (348.80, 171.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1219) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (278, 367, 662) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1430) [M::mem_pestat] mean and std.dev: (424.14, 230.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1814) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 58, #reads = 1076110 mem = 536882125 peak = 990425088 [M::process] read 679232 sequences (100000152 bp) in 2.966 CPU sec, 3.181 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (48, 281436, 10, 71) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (204, 302, 465) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 987) [M::mem_pestat] mean and std.dev: (319.49, 171.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1248) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (211, 326, 455) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 943) [M::mem_pestat] mean and std.dev: (344.33, 165.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1187) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (150, 1163, 1592) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4476) [M::mem_pestat] mean and std.dev: (879.90, 620.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5918) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (254, 324, 403) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 701) [M::mem_pestat] mean and std.dev: (302.77, 105.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 850) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 678814 sequences (100000154 bp) in 1.886 CPU sec, 1.890 real sec... [M::mem_process_seqs] Processed 680756 reads in 179.262 CPU sec, 5.705 real sec [M::mem_process_seqs] Processed 680894 reads in 118.393 CPU sec, 3.750 real sec sorting block 59, #reads = 1075527 mem = 536879262 peak = 990425088 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (42, 280543, 9, 59) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (273, 437, 841) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1977) [M::mem_pestat] mean and std.dev: (587.68, 475.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2545) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (221, 335, 460) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 938) [M::mem_pestat] mean and std.dev: (350.50, 163.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1177) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (191, 254, 405) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 833) [M::mem_pestat] mean and std.dev: (266.66, 104.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1047) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 678990 sequences (100000159 bp) in 2.558 CPU sec, 2.708 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (70, 280469, 8, 48) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (240, 266, 546) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1158) [M::mem_pestat] mean and std.dev: (350.50, 175.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1464) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (223, 341, 466) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 952) [M::mem_pestat] mean and std.dev: (355.18, 164.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1195) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (192, 298, 380) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 756) [M::mem_pestat] mean and std.dev: (280.67, 116.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 944) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 679298 sequences (100000045 bp) in 1.701 CPU sec, 1.708 real sec... [M::mem_process_seqs] Processed 679232 reads in 169.764 CPU sec, 5.415 real sec [M::mem_process_seqs] Processed 678814 reads in 112.415 CPU sec, 3.563 real sec sorting block 60, #reads = 1076101 mem = 536879151 peak = 990425088 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (40, 280247, 7, 23) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (179, 285, 364) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 734) [M::mem_pestat] mean and std.dev: (280.66, 145.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 919) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (222, 340, 464) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 948) [M::mem_pestat] mean and std.dev: (353.92, 164.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1190) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (220, 293, 584) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1312) [M::mem_pestat] mean and std.dev: (310.29, 151.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1676) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 679664 sequences (100000060 bp) in 2.581 CPU sec, 2.748 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (58, 281323, 7, 56) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (204, 270, 394) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 774) [M::mem_pestat] mean and std.dev: (275.37, 110.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 964) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (220, 336, 461) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 943) [M::mem_pestat] mean and std.dev: (351.46, 164.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1184) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (182, 246, 425) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 911) [M::mem_pestat] mean and std.dev: (275.04, 129.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1154) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 680080 sequences (100000076 bp) in 1.852 CPU sec, 1.857 real sec... [M::mem_process_seqs] Processed 678990 reads in 171.265 CPU sec, 5.450 real sec [M::mem_process_seqs] Processed 679298 reads in 111.344 CPU sec, 3.523 real sec sorting block 61, #reads = 1075655 mem = 536880740 peak = 990425088 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (22, 281821, 12, 48) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (134, 317, 443) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1061) [M::mem_pestat] mean and std.dev: (274.05, 133.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1370) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (219, 334, 457) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 933) [M::mem_pestat] mean and std.dev: (348.80, 163.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1171) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (4, 66, 4881) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 14635) [M::mem_pestat] mean and std.dev: (1314.50, 2072.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 19512) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (277, 436, 3859) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 11023) [M::mem_pestat] mean and std.dev: (1562.42, 1638.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 14605) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 677256 sequences (100000084 bp) in 2.619 CPU sec, 2.776 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (41, 280971, 7, 64) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (240, 344, 468) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 924) [M::mem_pestat] mean and std.dev: (339.67, 132.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1152) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (216, 332, 458) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 942) [M::mem_pestat] mean and std.dev: (348.63, 164.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1184) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (261, 323, 631) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1371) [M::mem_pestat] mean and std.dev: (339.38, 187.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1741) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 679664 reads in 169.697 CPU sec, 5.410 real sec [M::process] read 677922 sequences (100000164 bp) in 1.914 CPU sec, 1.922 real sec... sorting block 62, #reads = 1077227 mem = 536878076 peak = 990425088 [M::mem_process_seqs] Processed 680080 reads in 112.673 CPU sec, 3.561 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (41, 280554, 10, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (323, 433, 769) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1661) [M::mem_pestat] mean and std.dev: (413.03, 228.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2107) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (234, 356, 482) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 978) [M::mem_pestat] mean and std.dev: (368.47, 169.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1226) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (149, 1578, 1578) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4436) [M::mem_pestat] mean and std.dev: (879.38, 706.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5865) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (198, 321, 494) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1086) [M::mem_pestat] mean and std.dev: (328.08, 136.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1382) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 63, #reads = 1077403 mem = 536878126 peak = 1004511232 [M::process] read 681040 sequences (100000183 bp) in 2.890 CPU sec, 3.035 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (33, 280613, 3, 71) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (108, 280, 481) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1227) [M::mem_pestat] mean and std.dev: (284.21, 185.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1600) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (230, 352, 479) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 977) [M::mem_pestat] mean and std.dev: (365.09, 169.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1226) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (231, 263, 396) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 726) [M::mem_pestat] mean and std.dev: (273.94, 96.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 891) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 677256 reads in 169.997 CPU sec, 5.409 real sec [M::process] read 680662 sequences (100000046 bp) in 1.932 CPU sec, 1.941 real sec... [M::mem_process_seqs] Processed 677922 reads in 111.740 CPU sec, 3.531 real sec sorting block 64, #reads = 1076047 mem = 536882995 peak = 1004511232 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (75, 281538, 10, 39) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (160, 210, 366) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 778) [M::mem_pestat] mean and std.dev: (246.27, 123.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 984) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (212, 330, 459) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 953) [M::mem_pestat] mean and std.dev: (347.02, 166.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1200) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (145, 384, 759) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1987) [M::mem_pestat] mean and std.dev: (402.00, 279.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2601) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (188, 245, 531) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1217) [M::mem_pestat] mean and std.dev: (354.42, 263.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1560) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 681206 sequences (100000231 bp) in 2.820 CPU sec, 2.973 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (32, 281352, 9, 41) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (227, 507, 2512) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7082) [M::mem_pestat] mean and std.dev: (996.59, 1008.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9367) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (214, 333, 464) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 964) [M::mem_pestat] mean and std.dev: (350.00, 167.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1214) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (167, 267, 1067) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2867) [M::mem_pestat] mean and std.dev: (327.45, 273.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3767) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 681040 reads in 174.420 CPU sec, 5.549 real sec [M::process] read 680994 sequences (100000010 bp) in 1.911 CPU sec, 1.914 real sec... [M::mem_process_seqs] Processed 680662 reads in 114.883 CPU sec, 3.632 real sec sorting block 65, #reads = 1077849 mem = 536884274 peak = 1004511232 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (38, 281953, 13, 48) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (160, 355, 563) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1369) [M::mem_pestat] mean and std.dev: (384.31, 259.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1772) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (212, 328, 457) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 947) [M::mem_pestat] mean and std.dev: (345.61, 165.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1192) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (497, 996, 2082) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5252) [M::mem_pestat] mean and std.dev: (1407.00, 958.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6837) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (195, 276, 398) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 804) [M::mem_pestat] mean and std.dev: (251.76, 105.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1007) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 681054 sequences (100000104 bp) in 2.869 CPU sec, 3.003 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (59, 281821, 9, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (198, 379, 592) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1380) [M::mem_pestat] mean and std.dev: (401.52, 320.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1774) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (212, 328, 456) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 944) [M::mem_pestat] mean and std.dev: (345.06, 164.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1188) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (179, 386, 549) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1289) [M::mem_pestat] mean and std.dev: (367.65, 206.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1659) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 681096 sequences (100000009 bp) in 1.895 CPU sec, 1.899 real sec... [M::mem_process_seqs] Processed 681206 reads in 176.287 CPU sec, 5.601 real sec sorting block 66, #reads = 1077026 mem = 536876224 peak = 1004511232 [M::mem_process_seqs] Processed 680994 reads in 115.851 CPU sec, 3.663 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (35, 281747, 14, 45) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (172, 235, 290) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 526) [M::mem_pestat] mean and std.dev: (224.62, 80.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 644) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (212, 330, 461) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 959) [M::mem_pestat] mean and std.dev: (348.27, 167.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1208) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (446, 773, 3996) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 11096) [M::mem_pestat] mean and std.dev: (1610.43, 1864.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 14646) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (267, 299, 481) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 909) [M::mem_pestat] mean and std.dev: (316.15, 108.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1123) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 67, #reads = 1077273 mem = 536877921 peak = 1004511232 [M::process] read 680728 sequences (100000100 bp) in 2.635 CPU sec, 2.788 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (55, 281680, 13, 65) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (151, 347, 439) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1015) [M::mem_pestat] mean and std.dev: (329.23, 203.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1303) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (212, 330, 460) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 956) [M::mem_pestat] mean and std.dev: (347.26, 166.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1204) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (1238, 2575, 3580) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 8264) [M::mem_pestat] mean and std.dev: (2371.23, 1123.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 10606) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (250, 282, 424) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 772) [M::mem_pestat] mean and std.dev: (304.45, 103.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 946) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 678828 sequences (100000190 bp) in 1.903 CPU sec, 1.913 real sec... [M::mem_process_seqs] Processed 681054 reads in 179.871 CPU sec, 5.732 real sec [M::mem_process_seqs] Processed 681096 reads in 120.795 CPU sec, 3.861 real sec sorting block 68, #reads = 1076891 mem = 536879243 peak = 1004511232 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (38, 281682, 23, 40) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (142, 235, 605) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1531) [M::mem_pestat] mean and std.dev: (335.32, 232.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1994) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (213, 331, 462) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 960) [M::mem_pestat] mean and std.dev: (348.73, 167.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1209) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (444, 756, 1592) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3888) [M::mem_pestat] mean and std.dev: (1007.78, 896.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5036) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (216, 457, 468) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 972) [M::mem_pestat] mean and std.dev: (356.46, 142.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1224) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 678974 sequences (100000264 bp) in 2.833 CPU sec, 3.069 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (50, 280972, 16, 25) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (138, 228, 380) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 864) [M::mem_pestat] mean and std.dev: (277.00, 179.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1106) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (225, 347, 477) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 981) [M::mem_pestat] mean and std.dev: (361.86, 170.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1233) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (39, 385, 1799) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5319) [M::mem_pestat] mean and std.dev: (648.40, 728.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7079) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (210, 288, 370) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 690) [M::mem_pestat] mean and std.dev: (274.33, 85.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 850) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 680406 sequences (100000059 bp) in 1.751 CPU sec, 1.770 real sec... [M::mem_process_seqs] Processed 680728 reads in 180.986 CPU sec, 5.796 real sec [M::mem_process_seqs] Processed 678828 reads in 118.296 CPU sec, 3.769 real sec sorting block 69, #reads = 1077155 mem = 536881794 peak = 1004511232 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (46, 280895, 17, 54) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (195, 353, 492) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1086) [M::mem_pestat] mean and std.dev: (339.82, 178.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1383) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (224, 345, 473) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 971) [M::mem_pestat] mean and std.dev: (359.04, 167.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1220) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (1647, 1647, 2493) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4185) [M::mem_pestat] mean and std.dev: (1558.47, 874.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5057) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (220, 461, 515) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1105) [M::mem_pestat] mean and std.dev: (380.22, 201.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1400) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 680224 sequences (100000134 bp) in 2.760 CPU sec, 2.909 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (42, 281827, 12, 50) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (158, 273, 587) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1445) [M::mem_pestat] mean and std.dev: (363.87, 313.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1874) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (215, 333, 465) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 965) [M::mem_pestat] mean and std.dev: (350.70, 167.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1215) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (572, 4570, 4570) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 12566) [M::mem_pestat] mean and std.dev: (2698.58, 1915.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 16564) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (212, 291, 534) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1178) [M::mem_pestat] mean and std.dev: (329.23, 149.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1500) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 679566 sequences (100000245 bp) in 1.850 CPU sec, 1.849 real sec... [M::mem_process_seqs] Processed 678974 reads in 175.806 CPU sec, 5.593 real sec [M::mem_process_seqs] Processed 680406 reads in 115.913 CPU sec, 3.674 real sec sorting block 70, #reads = 1076209 mem = 536881131 peak = 1004511232 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (38, 281854, 6, 29) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (141, 176, 230) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 408) [M::mem_pestat] mean and std.dev: (182.24, 63.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 497) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (215, 333, 464) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 962) [M::mem_pestat] mean and std.dev: (350.72, 167.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1211) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (226, 302, 369) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 655) [M::mem_pestat] mean and std.dev: (286.37, 105.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 798) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 679444 sequences (100000039 bp) in 3.146 CPU sec, 3.283 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (54, 280865, 21, 54) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (169, 238, 292) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 538) [M::mem_pestat] mean and std.dev: (239.76, 104.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 661) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (220, 339, 471) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 973) [M::mem_pestat] mean and std.dev: (355.94, 168.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1224) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (198, 465, 831) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2097) [M::mem_pestat] mean and std.dev: (432.26, 324.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2730) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (232, 358, 695) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1621) [M::mem_pestat] mean and std.dev: (462.24, 305.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2084) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 680204 sequences (100000035 bp) in 1.840 CPU sec, 1.846 real sec... [M::mem_process_seqs] Processed 680224 reads in 182.616 CPU sec, 5.803 real sec sorting block 71, #reads = 1076459 mem = 536879701 peak = 1004511232 [M::mem_process_seqs] Processed 679566 reads in 121.862 CPU sec, 3.859 real sec sorting block 72, #reads = 1076877 mem = 536878911 peak = 1004511232 [M::process] read 680092 sequences (100000231 bp) in 2.968 CPU sec, 3.132 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (43, 281144, 13, 54) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (189, 228, 559) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1299) [M::mem_pestat] mean and std.dev: (351.61, 237.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1669) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (216, 333, 464) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 960) [M::mem_pestat] mean and std.dev: (350.60, 166.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1208) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (517, 547, 2268) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5770) [M::mem_pestat] mean and std.dev: (1179.85, 1051.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7521) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (195, 356, 635) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1515) [M::mem_pestat] mean and std.dev: (352.82, 242.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1955) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 680204 reads in 103.642 CPU sec, 3.257 real sec [M::process] read 680524 sequences (100000277 bp) in 2.021 CPU sec, 2.031 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (40, 280853, 9, 64) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (224, 394, 608) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1376) [M::mem_pestat] mean and std.dev: (352.29, 184.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1760) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (220, 341, 473) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 979) [M::mem_pestat] mean and std.dev: (356.78, 169.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1232) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (272, 426, 1126) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2834) [M::mem_pestat] mean and std.dev: (684.76, 707.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3688) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (48, 281247, 11, 47) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (196, 382, 1158) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3082) [M::mem_pestat] mean and std.dev: (525.50, 458.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4044) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (215, 332, 464) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 962) [M::mem_pestat] mean and std.dev: (350.67, 167.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1211) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (1546, 1812, 3347) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6949) [M::mem_pestat] mean and std.dev: (2148.18, 1116.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8750) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (222, 296, 456) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 924) [M::mem_pestat] mean and std.dev: (358.87, 205.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1179) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 679444 reads in 281.119 CPU sec, 8.948 real sec [M::process] read 680510 sequences (100000108 bp) in 2.007 CPU sec, 2.021 real sec... [M::mem_process_seqs] Processed 680092 reads in 138.744 CPU sec, 4.412 real sec sorting block 73, #reads = 1075284 mem = 536876488 peak = 1004511232 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (45, 282224, 9, 67) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (208, 322, 823) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2053) [M::mem_pestat] mean and std.dev: (564.55, 530.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2687) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (211, 326, 456) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 946) [M::mem_pestat] mean and std.dev: (344.43, 164.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1191) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (241, 370, 526) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1096) [M::mem_pestat] mean and std.dev: (385.28, 177.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1381) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 74, #reads = 1075495 mem = 536881512 peak = 1004511232 [M::process] read 680628 sequences (100000070 bp) in 2.793 CPU sec, 2.953 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (47, 281625, 8, 64) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (207, 284, 389) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 753) [M::mem_pestat] mean and std.dev: (306.24, 130.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 935) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (212, 327, 459) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 953) [M::mem_pestat] mean and std.dev: (346.33, 166.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1200) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (215, 329, 627) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1451) [M::mem_pestat] mean and std.dev: (377.05, 252.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1863) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 680786 sequences (100000144 bp) in 1.890 CPU sec, 1.891 real sec... [M::mem_process_seqs] Processed 680524 reads in 181.090 CPU sec, 5.763 real sec [M::mem_process_seqs] Processed 680510 reads in 118.165 CPU sec, 3.741 real sec sorting block 75, #reads = 1075899 mem = 536879187 peak = 1004511232 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (35, 282046, 8, 44) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (153, 233, 351) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 747) [M::mem_pestat] mean and std.dev: (271.74, 167.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 945) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (211, 324, 455) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 943) [M::mem_pestat] mean and std.dev: (343.52, 164.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1187) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (174, 353, 454) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1014) [M::mem_pestat] mean and std.dev: (297.89, 153.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1294) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 680626 sequences (100000274 bp) in 2.905 CPU sec, 3.063 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (57, 281706, 15, 56) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (190, 261, 480) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1060) [M::mem_pestat] mean and std.dev: (309.09, 156.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1350) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (211, 325, 456) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 946) [M::mem_pestat] mean and std.dev: (344.67, 165.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1191) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (440, 1184, 3203) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 8729) [M::mem_pestat] mean and std.dev: (1849.87, 1598.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 11492) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (181, 247, 389) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 805) [M::mem_pestat] mean and std.dev: (249.68, 104.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1013) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 680468 sequences (100000228 bp) in 1.930 CPU sec, 1.933 real sec... [M::mem_process_seqs] Processed 680628 reads in 178.871 CPU sec, 5.674 real sec [M::mem_process_seqs] Processed 680786 reads in 115.530 CPU sec, 3.660 real sec sorting block 76, #reads = 1075376 mem = 536878878 peak = 1004511232 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (45, 281882, 16, 56) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (189, 294, 395) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 807) [M::mem_pestat] mean and std.dev: (291.37, 121.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1013) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (213, 328, 462) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 960) [M::mem_pestat] mean and std.dev: (348.68, 168.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1209) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (28, 375, 1569) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4651) [M::mem_pestat] mean and std.dev: (566.87, 613.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6192) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (249, 369, 643) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1431) [M::mem_pestat] mean and std.dev: (407.15, 253.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1825) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 680878 sequences (100000125 bp) in 2.853 CPU sec, 3.021 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (51, 282497, 2, 34) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (211, 337, 445) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 913) [M::mem_pestat] mean and std.dev: (317.13, 143.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1147) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (213, 329, 462) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 960) [M::mem_pestat] mean and std.dev: (348.89, 168.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1209) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (159, 338, 701) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1785) [M::mem_pestat] mean and std.dev: (452.70, 320.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2327) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 682548 sequences (100000301 bp) in 1.958 CPU sec, 1.959 real sec... [M::mem_process_seqs] Processed 680626 reads in 176.963 CPU sec, 5.621 real sec [M::mem_process_seqs] Processed 680468 reads in 116.317 CPU sec, 3.672 real sec sorting block 77, #reads = 1075664 mem = 536880097 peak = 1004511232 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (55, 281825, 15, 37) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (275, 457, 499) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 947) [M::mem_pestat] mean and std.dev: (411.91, 194.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1188) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (211, 325, 456) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 946) [M::mem_pestat] mean and std.dev: (344.66, 166.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1191) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (509, 622, 6821) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 19445) [M::mem_pestat] mean and std.dev: (2860.53, 3525.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 25757) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (249, 300, 789) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1869) [M::mem_pestat] mean and std.dev: (545.75, 443.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2409) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 683876 sequences (100000196 bp) in 2.821 CPU sec, 2.965 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (51, 282526, 14, 50) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (181, 265, 373) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 757) [M::mem_pestat] mean and std.dev: (281.20, 150.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 949) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (202, 315, 449) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 943) [M::mem_pestat] mean and std.dev: (337.54, 166.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1190) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (609, 1281, 4900) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 13482) [M::mem_pestat] mean and std.dev: (2676.07, 2909.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 17773) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (256, 398, 605) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1303) [M::mem_pestat] mean and std.dev: (385.80, 203.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1652) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 681492 sequences (100000179 bp) in 1.962 CPU sec, 1.968 real sec... [M::mem_process_seqs] Processed 680878 reads in 175.234 CPU sec, 5.560 real sec sorting block 78, #reads = 1075999 mem = 536876569 peak = 1004511232 [M::mem_process_seqs] Processed 682548 reads in 116.970 CPU sec, 3.694 real sec sorting block 79, #reads = 1076535 mem = 536878473 peak = 1004511232 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (43, 283776, 14, 37) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (229, 310, 553) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1201) [M::mem_pestat] mean and std.dev: (372.55, 223.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1525) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (198, 314, 460) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 984) [M::mem_pestat] mean and std.dev: (340.68, 173.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1246) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (336, 837, 904) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2040) [M::mem_pestat] mean and std.dev: (533.00, 362.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2608) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (236, 298, 435) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 833) [M::mem_pestat] mean and std.dev: (331.29, 152.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1032) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 681436 sequences (100000176 bp) in 2.817 CPU sec, 2.934 real sec... [M::process] read 683178 sequences (100000104 bp) in 1.967 CPU sec, 1.975 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (41, 282995, 13, 50) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (151, 350, 575) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1423) [M::mem_pestat] mean and std.dev: (304.35, 160.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1847) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (210, 336, 481) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1023) [M::mem_pestat] mean and std.dev: (357.36, 177.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1294) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (423, 1009, 2558) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6828) [M::mem_pestat] mean and std.dev: (1387.08, 1021.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8963) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (182, 418, 578) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1370) [M::mem_pestat] mean and std.dev: (397.59, 264.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1766) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 683876 reads in 186.955 CPU sec, 5.936 real sec [M::mem_process_seqs] Processed 681492 reads in 123.345 CPU sec, 3.910 real sec sorting block 80, #reads = 1073436 mem = 536878448 peak = 1004511232 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (48, 282541, 7, 37) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (182, 334, 373) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 755) [M::mem_pestat] mean and std.dev: (283.81, 119.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 946) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (210, 333, 476) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1008) [M::mem_pestat] mean and std.dev: (353.89, 174.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1274) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (197, 296, 553) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1265) [M::mem_pestat] mean and std.dev: (362.25, 208.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1621) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 682748 sequences (100000157 bp) in 2.550 CPU sec, 2.665 real sec... [M::process] read 683238 sequences (100000293 bp) in 1.913 CPU sec, 1.921 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (53, 283519, 12, 59) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (251, 477, 1269) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3305) [M::mem_pestat] mean and std.dev: (667.10, 582.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4323) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (202, 317, 457) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 967) [M::mem_pestat] mean and std.dev: (340.75, 169.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1222) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (215, 241, 1742) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4796) [M::mem_pestat] mean and std.dev: (989.75, 1206.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6323) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (204, 297, 374) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 714) [M::mem_pestat] mean and std.dev: (267.30, 95.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 884) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 681436 reads in 181.574 CPU sec, 5.768 real sec sorting block 81, #reads = 1073951 mem = 536878632 peak = 1004511232 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (65, 282941, 17, 31) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (176, 288, 346) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 686) [M::mem_pestat] mean and std.dev: (285.95, 143.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 858) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (202, 320, 462) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 982) [M::mem_pestat] mean and std.dev: (343.59, 171.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1242) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (374, 780, 1915) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4997) [M::mem_pestat] mean and std.dev: (937.25, 777.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6538) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (224, 270, 1100) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2852) [M::mem_pestat] mean and std.dev: (573.35, 542.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3728) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 682148 sequences (100000198 bp) in 2.379 CPU sec, 2.384 real sec... [M::mem_process_seqs] Processed 682748 reads in 99.067 CPU sec, 3.130 real sec [M::mem_process_seqs] Processed 683178 reads in 252.260 CPU sec, 7.996 real sec sorting block 82, #reads = 1074681 mem = 536878602 peak = 1004511232 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (54, 283369, 6, 49) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (190, 298, 397) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 811) [M::mem_pestat] mean and std.dev: (308.60, 171.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1018) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (200, 315, 454) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 962) [M::mem_pestat] mean and std.dev: (338.61, 169.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1216) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (190, 261, 337) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 631) [M::mem_pestat] mean and std.dev: (251.21, 92.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 778) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 680070 sequences (100000124 bp) in 2.583 CPU sec, 2.720 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (32, 283389, 15, 43) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (203, 492, 882) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2240) [M::mem_pestat] mean and std.dev: (517.41, 459.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2919) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (205, 323, 462) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 976) [M::mem_pestat] mean and std.dev: (344.82, 169.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1233) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (18, 23, 496) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1452) [M::mem_pestat] mean and std.dev: (222.29, 292.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1930) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (242, 362, 515) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1061) [M::mem_pestat] mean and std.dev: (380.16, 186.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1334) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 683238 reads in 196.315 CPU sec, 6.224 real sec [M::process] read 683114 sequences (100000117 bp) in 2.054 CPU sec, 2.087 real sec... [M::mem_process_seqs] Processed 682148 reads in 116.864 CPU sec, 3.686 real sec sorting block 83, #reads = 1075019 mem = 536877714 peak = 1004511232 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (22, 282118, 13, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (173, 313, 313) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 593) [M::mem_pestat] mean and std.dev: (251.14, 87.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 733) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (219, 344, 483) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1011) [M::mem_pestat] mean and std.dev: (360.87, 173.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1275) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (884, 1882, 2157) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4703) [M::mem_pestat] mean and std.dev: (1328.00, 681.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5976) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (290, 390, 550) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1070) [M::mem_pestat] mean and std.dev: (338.41, 111.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1330) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 683890 sequences (100000017 bp) in 2.498 CPU sec, 2.642 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (48, 282942, 5, 45) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (200, 318, 469) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1007) [M::mem_pestat] mean and std.dev: (329.11, 158.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1276) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (202, 317, 454) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 958) [M::mem_pestat] mean and std.dev: (338.95, 167.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1210) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (201, 302, 337) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 609) [M::mem_pestat] mean and std.dev: (276.90, 110.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 745) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 683062 sequences (100000285 bp) in 1.890 CPU sec, 1.892 real sec... [M::mem_process_seqs] Processed 680070 reads in 178.382 CPU sec, 5.667 real sec sorting block 84, #reads = 1073075 mem = 536885235 peak = 1004511232 [M::mem_process_seqs] Processed 683114 reads in 117.513 CPU sec, 3.723 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (37, 283308, 15, 63) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (175, 221, 609) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1477) [M::mem_pestat] mean and std.dev: (255.31, 156.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1911) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (198, 311, 449) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 951) [M::mem_pestat] mean and std.dev: (334.61, 166.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1202) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (783, 803, 2544) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6066) [M::mem_pestat] mean and std.dev: (1643.87, 1436.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7827) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (297, 388, 647) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1347) [M::mem_pestat] mean and std.dev: (391.38, 204.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1697) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 682706 sequences (100000282 bp) in 2.866 CPU sec, 3.010 real sec... [M::process] read 681412 sequences (100000238 bp) in 1.739 CPU sec, 1.740 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (46, 282987, 8, 57) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (163, 226, 300) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 574) [M::mem_pestat] mean and std.dev: (211.38, 82.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 711) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (201, 317, 456) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 966) [M::mem_pestat] mean and std.dev: (339.35, 167.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1221) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (215, 303, 401) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 773) [M::mem_pestat] mean and std.dev: (297.48, 132.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 959) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 683890 reads in 180.800 CPU sec, 5.735 real sec sorting block 85, #reads = 1073821 mem = 536880360 peak = 1004511232 [M::mem_process_seqs] Processed 683062 reads in 114.852 CPU sec, 3.639 real sec sorting block 86, #reads = 1073315 mem = 536878889 peak = 1018011648 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (51, 282431, 13, 42) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (207, 283, 548) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1230) [M::mem_pestat] mean and std.dev: (366.93, 194.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1571) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (204, 322, 461) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 975) [M::mem_pestat] mean and std.dev: (343.62, 169.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1232) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (449, 487, 1014) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2144) [M::mem_pestat] mean and std.dev: (626.69, 282.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2709) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (207, 305, 468) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 990) [M::mem_pestat] mean and std.dev: (292.00, 167.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1251) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 679610 sequences (100000167 bp) in 2.234 CPU sec, 2.323 real sec... [M::process] read 681250 sequences (100000062 bp) in 1.490 CPU sec, 1.494 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (50, 282197, 8, 55) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (153, 320, 781) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2037) [M::mem_pestat] mean and std.dev: (502.22, 435.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2665) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (209, 329, 467) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 983) [M::mem_pestat] mean and std.dev: (349.02, 170.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1241) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (214, 385, 464) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 964) [M::mem_pestat] mean and std.dev: (357.70, 158.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1214) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 682706 reads in 179.730 CPU sec, 5.729 real sec [M::mem_process_seqs] Processed 681412 reads in 116.788 CPU sec, 3.715 real sec sorting block 87, #reads = 1073068 mem = 536882161 peak = 1018011648 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (78, 281603, 13, 71) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (241, 349, 493) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 997) [M::mem_pestat] mean and std.dev: (348.96, 155.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1249) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (220, 346, 483) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1009) [M::mem_pestat] mean and std.dev: (362.02, 173.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1272) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (24, 306, 411) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1185) [M::mem_pestat] mean and std.dev: (307.46, 243.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1572) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (245, 427, 539) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1127) [M::mem_pestat] mean and std.dev: (416.21, 201.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1421) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 681842 sequences (100000196 bp) in 2.783 CPU sec, 2.931 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (43, 282362, 10, 57) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (234, 372, 616) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1380) [M::mem_pestat] mean and std.dev: (401.12, 212.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1762) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (210, 330, 468) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 984) [M::mem_pestat] mean and std.dev: (350.17, 170.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1242) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (683, 2005, 2556) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6302) [M::mem_pestat] mean and std.dev: (1472.20, 933.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8175) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (231, 290, 499) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1035) [M::mem_pestat] mean and std.dev: (346.02, 181.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1303) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 680100 sequences (100000103 bp) in 1.900 CPU sec, 1.903 real sec... [M::mem_process_seqs] Processed 679610 reads in 178.742 CPU sec, 5.664 real sec [M::mem_process_seqs] Processed 681250 reads in 117.467 CPU sec, 3.719 real sec sorting block 88, #reads = 1072458 mem = 536880345 peak = 1018011648 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (66, 282833, 4, 38) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (176, 342, 583) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1397) [M::mem_pestat] mean and std.dev: (342.47, 204.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1804) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (207, 326, 463) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 975) [M::mem_pestat] mean and std.dev: (345.50, 168.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1231) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (223, 306, 518) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1108) [M::mem_pestat] mean and std.dev: (347.81, 167.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1403) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 681050 sequences (100000181 bp) in 2.517 CPU sec, 2.669 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (51, 281761, 13, 58) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (206, 371, 900) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2288) [M::mem_pestat] mean and std.dev: (694.84, 684.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3434) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (216, 338, 475) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 993) [M::mem_pestat] mean and std.dev: (355.68, 170.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1252) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (53, 432, 863) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2483) [M::mem_pestat] mean and std.dev: (559.92, 518.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3293) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (224, 332, 472) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 968) [M::mem_pestat] mean and std.dev: (324.12, 153.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1216) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 680704 sequences (100000099 bp) in 1.870 CPU sec, 1.877 real sec... [M::mem_process_seqs] Processed 681842 reads in 174.643 CPU sec, 5.542 real sec sorting block 89, #reads = 1072191 mem = 536876666 peak = 1018011648 [M::mem_process_seqs] Processed 680100 reads in 115.691 CPU sec, 3.666 real sec sorting block 90, #reads = 1071055 mem = 536879410 peak = 1018011648 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (70, 281861, 4, 44) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (185, 312, 438) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 944) [M::mem_pestat] mean and std.dev: (340.29, 212.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1197) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (211, 326, 458) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 952) [M::mem_pestat] mean and std.dev: (344.62, 164.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1199) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (161, 258, 408) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 902) [M::mem_pestat] mean and std.dev: (260.52, 119.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1149) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 680290 sequences (100000165 bp) in 2.684 CPU sec, 2.789 real sec... [M::process] read 678990 sequences (100000259 bp) in 1.890 CPU sec, 1.884 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (42, 282016, 12, 49) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (238, 343, 459) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 901) [M::mem_pestat] mean and std.dev: (353.66, 176.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1122) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (212, 329, 463) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 965) [M::mem_pestat] mean and std.dev: (347.71, 166.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1216) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (425, 753, 2884) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7802) [M::mem_pestat] mean and std.dev: (1341.83, 1468.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 10261) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (177, 284, 593) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1425) [M::mem_pestat] mean and std.dev: (373.62, 268.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1841) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 681050 reads in 172.860 CPU sec, 5.472 real sec [M::mem_process_seqs] Processed 680704 reads in 111.122 CPU sec, 3.522 real sec sorting block 91, #reads = 1072706 mem = 536877664 peak = 1018011648 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (49, 281705, 18, 51) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (182, 252, 921) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2399) [M::mem_pestat] mean and std.dev: (436.54, 454.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3138) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (214, 334, 471) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 985) [M::mem_pestat] mean and std.dev: (352.96, 169.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1242) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (435, 1463, 2752) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7386) [M::mem_pestat] mean and std.dev: (1889.67, 1507.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9703) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (240, 336, 505) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1035) [M::mem_pestat] mean and std.dev: (332.64, 156.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1300) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 681480 sequences (100000008 bp) in 2.458 CPU sec, 2.559 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (47, 281834, 16, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (205, 264, 339) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 607) [M::mem_pestat] mean and std.dev: (255.32, 82.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 741) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (222, 346, 482) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1002) [M::mem_pestat] mean and std.dev: (361.87, 170.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1262) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (1221, 1382, 5310) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 13488) [M::mem_pestat] mean and std.dev: (2376.62, 2052.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 17577) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (171, 353, 599) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1455) [M::mem_pestat] mean and std.dev: (361.63, 216.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1883) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 681098 sequences (100000069 bp) in 1.900 CPU sec, 1.899 real sec... [M::mem_process_seqs] Processed 680290 reads in 172.668 CPU sec, 5.480 real sec [M::mem_process_seqs] Processed 678990 reads in 113.841 CPU sec, 3.604 real sec sorting block 92, #reads = 1073222 mem = 536878596 peak = 1018011648 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (53, 282342, 11, 38) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (140, 225, 478) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1154) [M::mem_pestat] mean and std.dev: (312.20, 231.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1492) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (208, 324, 459) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 961) [M::mem_pestat] mean and std.dev: (343.97, 166.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1212) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (84, 129, 960) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2712) [M::mem_pestat] mean and std.dev: (310.10, 353.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3588) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (166, 251, 450) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1018) [M::mem_pestat] mean and std.dev: (326.58, 214.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1302) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 679960 sequences (100000210 bp) in 2.637 CPU sec, 2.737 real sec... [M::process] read 680804 sequences (100000136 bp) in 1.840 CPU sec, 1.843 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (55, 282110, 12, 62) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (139, 252, 328) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 706) [M::mem_pestat] mean and std.dev: (243.42, 103.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 895) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (209, 324, 457) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 953) [M::mem_pestat] mean and std.dev: (343.78, 165.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1201) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (981, 1489, 1859) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3615) [M::mem_pestat] mean and std.dev: (1403.50, 883.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4939) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (196, 300, 447) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 949) [M::mem_pestat] mean and std.dev: (304.58, 144.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1200) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 681480 reads in 174.486 CPU sec, 5.526 real sec [M::mem_process_seqs] Processed 681098 reads in 112.510 CPU sec, 3.574 real sec sorting block 93, #reads = 1071437 mem = 536877145 peak = 1018011648 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (43, 282110, 8, 51) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (232, 307, 600) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1336) [M::mem_pestat] mean and std.dev: (373.70, 260.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1704) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (216, 336, 472) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 984) [M::mem_pestat] mean and std.dev: (354.66, 170.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1240) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (285, 396, 576) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1158) [M::mem_pestat] mean and std.dev: (389.40, 186.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1449) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 680842 sequences (100000259 bp) in 2.451 CPU sec, 2.548 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (40, 282158, 16, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (248, 356, 616) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1352) [M::mem_pestat] mean and std.dev: (493.98, 323.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1789) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (212, 330, 466) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 974) [M::mem_pestat] mean and std.dev: (350.16, 170.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1228) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (137, 1434, 1732) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4922) [M::mem_pestat] mean and std.dev: (1006.44, 799.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6517) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (165, 249, 395) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 855) [M::mem_pestat] mean and std.dev: (286.32, 136.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1085) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 681054 sequences (100000063 bp) in 1.870 CPU sec, 1.875 real sec... [M::mem_process_seqs] Processed 679960 reads in 168.102 CPU sec, 5.332 real sec sorting block 94, #reads = 1071955 mem = 536881228 peak = 1018011648 [M::mem_process_seqs] Processed 680804 reads in 109.790 CPU sec, 3.473 real sec sorting block 95, #reads = 1071490 mem = 536878820 peak = 1018011648 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (56, 282333, 11, 33) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (201, 338, 601) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1401) [M::mem_pestat] mean and std.dev: (402.32, 277.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1801) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (210, 328, 464) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 972) [M::mem_pestat] mean and std.dev: (348.27, 169.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1226) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (715, 1287, 2676) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6598) [M::mem_pestat] mean and std.dev: (1968.82, 2082.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 10299) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (179, 253, 337) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 653) [M::mem_pestat] mean and std.dev: (249.38, 118.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 811) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 681400 sequences (100000136 bp) in 2.697 CPU sec, 2.799 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (53, 282058, 17, 56) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (204, 275, 576) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1320) [M::mem_pestat] mean and std.dev: (313.71, 174.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1692) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (209, 328, 465) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 977) [M::mem_pestat] mean and std.dev: (348.62, 170.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1233) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (838, 1861, 4985) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 13279) [M::mem_pestat] mean and std.dev: (2725.18, 2566.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 17426) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (190, 346, 587) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1381) [M::mem_pestat] mean and std.dev: (364.57, 216.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1778) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 686750 sequences (100000019 bp) in 1.960 CPU sec, 1.963 real sec... [M::mem_process_seqs] Processed 680842 reads in 168.340 CPU sec, 5.330 real sec [M::mem_process_seqs] Processed 681054 reads in 110.434 CPU sec, 3.490 real sec sorting block 96, #reads = 1072832 mem = 536881047 peak = 1018011648 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (51, 282390, 7, 40) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (192, 324, 457) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 987) [M::mem_pestat] mean and std.dev: (337.51, 181.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1252) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (209, 328, 466) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 980) [M::mem_pestat] mean and std.dev: (348.55, 170.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1237) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (191, 425, 498) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1112) [M::mem_pestat] mean and std.dev: (372.26, 218.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1419) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 685174 sequences (100000210 bp) in 2.693 CPU sec, 2.785 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (33, 284226, 6, 61) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (159, 304, 381) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 825) [M::mem_pestat] mean and std.dev: (273.12, 104.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1047) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (188, 294, 428) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 908) [M::mem_pestat] mean and std.dev: (318.68, 158.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1148) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (174, 235, 325) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 627) [M::mem_pestat] mean and std.dev: (252.97, 94.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 778) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 684718 sequences (100000199 bp) in 1.980 CPU sec, 1.982 real sec... [M::mem_process_seqs] Processed 681400 reads in 179.734 CPU sec, 5.699 real sec [M::mem_process_seqs] Processed 686750 reads in 122.333 CPU sec, 3.869 real sec sorting block 97, #reads = 1071597 mem = 536879704 peak = 1018011648 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (53, 284868, 11, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (201, 281, 399) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 795) [M::mem_pestat] mean and std.dev: (314.12, 139.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 993) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (194, 306, 439) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 929) [M::mem_pestat] mean and std.dev: (327.47, 161.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1174) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (554, 634, 2076) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5120) [M::mem_pestat] mean and std.dev: (981.00, 792.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6642) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (221, 320, 443) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 887) [M::mem_pestat] mean and std.dev: (290.91, 136.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1109) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 683838 sequences (100000146 bp) in 2.491 CPU sec, 2.582 real sec... [M::process] read 683896 sequences (100000264 bp) in 1.510 CPU sec, 1.511 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (48, 284310, 17, 56) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (226, 384, 1547) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4189) [M::mem_pestat] mean and std.dev: (742.58, 860.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5510) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (196, 308, 437) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 919) [M::mem_pestat] mean and std.dev: (327.39, 159.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1160) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (544, 1343, 2810) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7342) [M::mem_pestat] mean and std.dev: (1502.65, 1141.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9608) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (267, 421, 1124) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2838) [M::mem_pestat] mean and std.dev: (712.43, 656.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3695) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 685174 reads in 184.399 CPU sec, 5.869 real sec sorting block 98, #reads = 1068531 mem = 536881820 peak = 1018011648 [M::mem_process_seqs] Processed 684718 reads in 116.853 CPU sec, 3.730 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (39, 283843, 6, 59) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (223, 474, 1040) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2674) [M::mem_pestat] mean and std.dev: (586.00, 482.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3491) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (198, 312, 443) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 933) [M::mem_pestat] mean and std.dev: (331.49, 161.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1178) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (224, 254, 499) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1049) [M::mem_pestat] mean and std.dev: (321.19, 173.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1324) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 99, #reads = 1067905 mem = 536876564 peak = 1018011648 [M::process] read 684322 sequences (100000235 bp) in 2.181 CPU sec, 2.279 real sec... [M::process] read 681892 sequences (100000038 bp) in 1.460 CPU sec, 1.456 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (62, 283639, 13, 53) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (218, 289, 639) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1481) [M::mem_pestat] mean and std.dev: (352.25, 239.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1902) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (199, 313, 443) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 931) [M::mem_pestat] mean and std.dev: (332.53, 162.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1175) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (835, 1464, 3882) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 9976) [M::mem_pestat] mean and std.dev: (2513.23, 2437.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 13023) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (220, 392, 478) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 994) [M::mem_pestat] mean and std.dev: (366.08, 200.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1252) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 683838 reads in 175.701 CPU sec, 5.604 real sec [M::mem_process_seqs] Processed 683896 reads in 113.034 CPU sec, 3.596 real sec sorting block 100, #reads = 1070821 mem = 536885033 peak = 1018011648 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (32, 284072, 9, 24) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (163, 294, 423) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 943) [M::mem_pestat] mean and std.dev: (310.07, 182.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1203) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (197, 308, 437) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 917) [M::mem_pestat] mean and std.dev: (328.07, 160.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1157) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (219, 268, 359) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 639) [M::mem_pestat] mean and std.dev: (267.77, 96.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 779) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 683538 sequences (100000153 bp) in 2.649 CPU sec, 2.774 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (39, 283369, 2, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (171, 333, 601) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1461) [M::mem_pestat] mean and std.dev: (362.53, 200.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1891) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (208, 327, 460) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 964) [M::mem_pestat] mean and std.dev: (344.99, 166.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1216) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (158, 319, 538) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1298) [M::mem_pestat] mean and std.dev: (292.14, 179.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1678) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 683944 sequences (100000258 bp) in 1.890 CPU sec, 1.897 real sec... [M::mem_process_seqs] Processed 684322 reads in 171.081 CPU sec, 5.424 real sec [M::mem_process_seqs] Processed 681892 reads in 107.471 CPU sec, 3.396 real sec sorting block 101, #reads = 1071008 mem = 536880566 peak = 1018011648 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (42, 283600, 19, 48) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (195, 368, 1026) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2688) [M::mem_pestat] mean and std.dev: (631.03, 681.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3519) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (200, 314, 445) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 935) [M::mem_pestat] mean and std.dev: (334.16, 163.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1180) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (316, 840, 2673) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7387) [M::mem_pestat] mean and std.dev: (1586.42, 1687.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9744) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (213, 355, 404) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 786) [M::mem_pestat] mean and std.dev: (306.19, 124.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 977) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 683728 sequences (100000039 bp) in 2.486 CPU sec, 2.576 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (62, 283873, 12, 64) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (137, 252, 342) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 752) [M::mem_pestat] mean and std.dev: (268.14, 153.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 957) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (198, 310, 443) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 933) [M::mem_pestat] mean and std.dev: (331.53, 162.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1178) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (206, 384, 3218) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 9242) [M::mem_pestat] mean and std.dev: (1608.42, 2507.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 12254) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (223, 387, 916) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2302) [M::mem_pestat] mean and std.dev: (600.19, 497.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2995) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 683194 sequences (100000020 bp) in 1.709 CPU sec, 1.711 real sec... [M::mem_process_seqs] Processed 683538 reads in 165.835 CPU sec, 5.268 real sec [M::mem_process_seqs] Processed 683944 reads in 107.760 CPU sec, 3.406 real sec sorting block 102, #reads = 1072405 mem = 536880127 peak = 1018011648 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (35, 283616, 17, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (128, 204, 437) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1055) [M::mem_pestat] mean and std.dev: (243.81, 138.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1364) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (199, 311, 443) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 931) [M::mem_pestat] mean and std.dev: (332.21, 162.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1175) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (205, 679, 980) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2530) [M::mem_pestat] mean and std.dev: (735.00, 663.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3387) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (201, 286, 393) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 777) [M::mem_pestat] mean and std.dev: (284.55, 134.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 969) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 681872 sequences (100000211 bp) in 2.672 CPU sec, 2.799 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (26, 283561, 11, 49) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (205, 237, 509) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1117) [M::mem_pestat] mean and std.dev: (354.92, 234.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1421) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (202, 316, 451) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 949) [M::mem_pestat] mean and std.dev: (337.43, 166.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1198) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (517, 1108, 2452) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6322) [M::mem_pestat] mean and std.dev: (1384.73, 1006.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8257) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (197, 325, 394) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 788) [M::mem_pestat] mean and std.dev: (288.84, 124.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 985) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 679560 sequences (100000012 bp) in 1.900 CPU sec, 1.902 real sec... [M::mem_process_seqs] Processed 683728 reads in 170.240 CPU sec, 5.402 real sec sorting block 103, #reads = 1072484 mem = 536880117 peak = 1018011648 [M::mem_process_seqs] Processed 683194 reads in 109.624 CPU sec, 3.467 real sec sorting block 104, #reads = 1072816 mem = 536879088 peak = 1018011648 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (54, 283144, 10, 43) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (225, 448, 576) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1278) [M::mem_pestat] mean and std.dev: (378.64, 178.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1629) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (207, 324, 458) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 960) [M::mem_pestat] mean and std.dev: (343.40, 167.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1211) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (27, 554, 3278) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 9780) [M::mem_pestat] mean and std.dev: (1116.60, 1428.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 13031) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (265, 298, 357) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (81, 541) [M::mem_pestat] mean and std.dev: (281.93, 82.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 633) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 682260 sequences (100000267 bp) in 2.501 CPU sec, 2.575 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (48, 282408, 16, 55) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (235, 341, 723) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1699) [M::mem_pestat] mean and std.dev: (415.98, 305.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2187) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (220, 345, 481) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1003) [M::mem_pestat] mean and std.dev: (361.17, 172.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1264) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (180, 477, 750) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1890) [M::mem_pestat] mean and std.dev: (470.86, 376.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2460) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (229, 318, 451) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 895) [M::mem_pestat] mean and std.dev: (338.36, 152.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1117) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 681714 sequences (100000008 bp) in 1.860 CPU sec, 1.860 real sec... [M::mem_process_seqs] Processed 681872 reads in 166.562 CPU sec, 5.287 real sec [M::mem_process_seqs] Processed 679560 reads in 103.378 CPU sec, 3.274 real sec sorting block 105, #reads = 1072068 mem = 536883129 peak = 1018011648 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (75, 283220, 16, 31) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (187, 324, 706) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1744) [M::mem_pestat] mean and std.dev: (412.19, 309.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2263) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (206, 326, 463) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 977) [M::mem_pestat] mean and std.dev: (346.19, 170.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1234) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (299, 357, 800) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1802) [M::mem_pestat] mean and std.dev: (369.38, 222.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2303) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (240, 300, 524) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1092) [M::mem_pestat] mean and std.dev: (328.52, 200.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1376) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 681180 sequences (100000088 bp) in 2.569 CPU sec, 2.662 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (36, 282740, 15, 44) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (175, 275, 383) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 799) [M::mem_pestat] mean and std.dev: (272.70, 150.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1007) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (209, 329, 466) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 980) [M::mem_pestat] mean and std.dev: (349.28, 171.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1237) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (470, 759, 3243) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 8789) [M::mem_pestat] mean and std.dev: (1497.47, 1275.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 11562) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (253, 291, 585) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1249) [M::mem_pestat] mean and std.dev: (351.64, 177.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1581) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 681256 sequences (100000029 bp) in 1.830 CPU sec, 1.822 real sec... [M::mem_process_seqs] Processed 682260 reads in 163.281 CPU sec, 5.183 real sec [M::mem_process_seqs] Processed 681714 reads in 104.701 CPU sec, 3.307 real sec sorting block 106, #reads = 1070587 mem = 536878960 peak = 1018011648 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (68, 282241, 13, 60) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (193, 270, 575) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1339) [M::mem_pestat] mean and std.dev: (340.33, 254.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1721) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (211, 331, 467) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 979) [M::mem_pestat] mean and std.dev: (350.66, 171.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1235) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (917, 917, 2014) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4208) [M::mem_pestat] mean and std.dev: (1402.31, 971.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5305) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (223, 371, 763) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1843) [M::mem_pestat] mean and std.dev: (454.02, 444.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2383) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 680930 sequences (100000214 bp) in 2.537 CPU sec, 2.643 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (48, 282275, 9, 65) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (180, 299, 417) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 891) [M::mem_pestat] mean and std.dev: (308.87, 145.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1128) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (210, 330, 467) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 981) [M::mem_pestat] mean and std.dev: (349.67, 170.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1238) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (267, 461, 792) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1842) [M::mem_pestat] mean and std.dev: (504.72, 288.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2367) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 681180 reads in 159.278 CPU sec, 5.057 real sec [M::process] read 679416 sequences (100000226 bp) in 1.835 CPU sec, 1.841 real sec... [M::mem_process_seqs] Processed 681256 reads in 104.333 CPU sec, 3.291 real sec sorting block 107, #reads = 1071630 mem = 536882261 peak = 1018011648 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (43, 282316, 6, 68) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (196, 242, 455) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 973) [M::mem_pestat] mean and std.dev: (309.35, 176.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1232) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (211, 331, 469) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 985) [M::mem_pestat] mean and std.dev: (351.12, 171.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1243) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (258, 315, 661) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1467) [M::mem_pestat] mean and std.dev: (382.61, 234.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1870) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 679508 sequences (100000120 bp) in 2.598 CPU sec, 2.719 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (52, 281354, 10, 55) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (161, 264, 367) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 779) [M::mem_pestat] mean and std.dev: (257.54, 122.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 985) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (219, 343, 480) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1002) [M::mem_pestat] mean and std.dev: (361.16, 174.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1263) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (652, 1237, 1512) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3232) [M::mem_pestat] mean and std.dev: (1034.70, 431.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4092) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (193, 273, 494) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1096) [M::mem_pestat] mean and std.dev: (354.41, 212.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1397) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 681332 sequences (100000120 bp) in 1.460 CPU sec, 1.457 real sec... [M::mem_process_seqs] Processed 680930 reads in 162.485 CPU sec, 5.165 real sec sorting block 108, #reads = 1071890 mem = 536881733 peak = 1018011648 [M::mem_process_seqs] Processed 679416 reads in 105.197 CPU sec, 3.339 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (31, 282103, 18, 55) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (156, 231, 314) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 630) [M::mem_pestat] mean and std.dev: (221.04, 91.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 788) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (219, 342, 481) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1005) [M::mem_pestat] mean and std.dev: (361.18, 174.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1267) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (253, 623, 4625) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 13369) [M::mem_pestat] mean and std.dev: (1844.50, 1987.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 17741) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (252, 385, 916) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2244) [M::mem_pestat] mean and std.dev: (450.40, 337.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2908) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 109, #reads = 1071179 mem = 536882388 peak = 1018011648 [M::process] read 681106 sequences (100000057 bp) in 2.678 CPU sec, 2.806 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (67, 282375, 14, 45) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (162, 237, 388) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 840) [M::mem_pestat] mean and std.dev: (246.03, 124.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1066) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (209, 327, 466) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 980) [M::mem_pestat] mean and std.dev: (348.95, 171.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1237) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (918, 2096, 9940) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 27984) [M::mem_pestat] mean and std.dev: (4531.86, 4219.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 37006) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (199, 293, 563) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1291) [M::mem_pestat] mean and std.dev: (396.79, 323.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1692) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 679508 reads in 164.529 CPU sec, 5.235 real sec [M::process] read 680802 sequences (100000187 bp) in 1.729 CPU sec, 1.730 real sec... [M::mem_process_seqs] Processed 681332 reads in 107.295 CPU sec, 3.390 real sec sorting block 110, #reads = 1071531 mem = 536885446 peak = 1018011648 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (41, 282696, 20, 43) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (225, 273, 629) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1437) [M::mem_pestat] mean and std.dev: (296.74, 176.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1841) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (210, 328, 465) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 975) [M::mem_pestat] mean and std.dev: (349.53, 171.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1230) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (585, 974, 1507) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3351) [M::mem_pestat] mean and std.dev: (996.84, 658.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4273) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (256, 317, 885) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2143) [M::mem_pestat] mean and std.dev: (441.24, 308.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2772) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 681254 sequences (100000267 bp) in 2.787 CPU sec, 2.905 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (46, 282703, 11, 38) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (208, 365, 409) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 811) [M::mem_pestat] mean and std.dev: (295.50, 116.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1012) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (213, 333, 474) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 996) [M::mem_pestat] mean and std.dev: (354.59, 174.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1257) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (126, 465, 1464) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4140) [M::mem_pestat] mean and std.dev: (598.36, 586.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5478) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (247, 312, 539) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1123) [M::mem_pestat] mean and std.dev: (321.45, 157.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1415) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 681106 reads in 161.966 CPU sec, 5.155 real sec [M::process] read 681374 sequences (100000057 bp) in 1.829 CPU sec, 1.849 real sec... [M::mem_process_seqs] Processed 680802 reads in 105.096 CPU sec, 3.314 real sec sorting block 111, #reads = 1072429 mem = 536883267 peak = 1018011648 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (41, 282525, 19, 62) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (131, 206, 535) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1343) [M::mem_pestat] mean and std.dev: (272.08, 195.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1747) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (210, 330, 476) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1008) [M::mem_pestat] mean and std.dev: (354.09, 176.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1274) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (372, 557, 1299) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3153) [M::mem_pestat] mean and std.dev: (782.88, 689.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4080) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (243, 350, 613) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1353) [M::mem_pestat] mean and std.dev: (430.20, 254.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1723) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 681516 sequences (100000126 bp) in 2.975 CPU sec, 3.106 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (51, 282633, 12, 53) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (152, 246, 537) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1307) [M::mem_pestat] mean and std.dev: (324.93, 265.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1692) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (208, 328, 472) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1000) [M::mem_pestat] mean and std.dev: (352.83, 177.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1264) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (152, 438, 914) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2438) [M::mem_pestat] mean and std.dev: (458.73, 413.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3200) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (226, 263, 428) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 832) [M::mem_pestat] mean and std.dev: (291.73, 112.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1034) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 681254 reads in 165.708 CPU sec, 5.285 real sec [M::mem_process_seqs] Processed 681374 reads in 110.075 CPU sec, 3.468 real sec sorting block 112, #reads = 1072671 mem = 536878582 peak = 1018011648 [M::process] read 684212 sequences (100000026 bp) in 2.007 CPU sec, 2.046 real sec... sorting block 113, #reads = 1071910 mem = 536879853 peak = 1018011648 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (59, 283263, 10, 49) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (185, 255, 365) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 725) [M::mem_pestat] mean and std.dev: (286.59, 151.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 905) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (207, 324, 465) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 981) [M::mem_pestat] mean and std.dev: (348.28, 173.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1239) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (583, 1100, 1205) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2449) [M::mem_pestat] mean and std.dev: (899.33, 631.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3426) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (237, 327, 677) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1557) [M::mem_pestat] mean and std.dev: (436.58, 298.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1997) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 682870 sequences (100000178 bp) in 2.744 CPU sec, 2.897 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (62, 283590, 16, 55) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (222, 310, 385) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 711) [M::mem_pestat] mean and std.dev: (297.18, 108.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 874) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::process] read 682868 sequences (100000240 bp) in 1.820 CPU sec, 1.817 real sec... [M::mem_pestat] (25, 50, 75) percentile: (196, 308, 445) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 943) [M::mem_pestat] mean and std.dev: (331.96, 165.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1192) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (369, 971, 1336) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3270) [M::mem_pestat] mean and std.dev: (848.20, 567.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4237) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (195, 274, 610) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1440) [M::mem_pestat] mean and std.dev: (305.50, 207.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1855) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 681516 reads in 182.167 CPU sec, 5.783 real sec [M::mem_process_seqs] Processed 684212 reads in 120.052 CPU sec, 3.806 real sec sorting block 114, #reads = 1064467 mem = 536878453 peak = 1018011648 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (49, 283542, 13, 73) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (225, 306, 470) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 960) [M::mem_pestat] mean and std.dev: (348.92, 188.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1205) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (203, 320, 452) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 950) [M::mem_pestat] mean and std.dev: (338.54, 164.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1199) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (376, 680, 1968) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5152) [M::mem_pestat] mean and std.dev: (919.67, 934.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6744) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (178, 406, 675) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1669) [M::mem_pestat] mean and std.dev: (484.89, 414.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2166) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 682254 sequences (100000192 bp) in 2.474 CPU sec, 2.582 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (62, 283626, 8, 22) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (233, 429, 1123) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2903) [M::mem_pestat] mean and std.dev: (663.18, 560.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3793) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (203, 319, 453) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 953) [M::mem_pestat] mean and std.dev: (338.71, 165.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1203) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (239, 335, 409) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 749) [M::mem_pestat] mean and std.dev: (326.91, 126.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 919) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 682024 sequences (100000202 bp) in 1.850 CPU sec, 1.847 real sec... [M::mem_process_seqs] Processed 682870 reads in 157.545 CPU sec, 4.992 real sec [M::mem_process_seqs] Processed 682868 reads in 100.300 CPU sec, 3.175 real sec sorting block 115, #reads = 1071749 mem = 536877981 peak = 1018011648 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (38, 283530, 13, 35) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (202, 454, 1189) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3163) [M::mem_pestat] mean and std.dev: (533.49, 407.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4150) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (206, 323, 455) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 953) [M::mem_pestat] mean and std.dev: (341.53, 165.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1202) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (266, 667, 3230) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 9158) [M::mem_pestat] mean and std.dev: (1394.38, 1505.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 12122) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (295, 346, 1059) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2587) [M::mem_pestat] mean and std.dev: (569.71, 480.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3351) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 681814 sequences (100000243 bp) in 2.652 CPU sec, 2.764 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (30, 282898, 6, 59) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (146, 334, 981) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2651) [M::mem_pestat] mean and std.dev: (461.44, 507.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3486) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (206, 324, 458) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 962) [M::mem_pestat] mean and std.dev: (342.96, 166.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1214) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (173, 279, 475) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1079) [M::mem_pestat] mean and std.dev: (355.35, 232.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1381) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 682254 reads in 153.661 CPU sec, 4.873 real sec [M::process] read 679310 sequences (100000124 bp) in 1.900 CPU sec, 1.905 real sec... [M::mem_process_seqs] Processed 682024 reads in 99.330 CPU sec, 3.127 real sec sorting block 116, #reads = 1075345 mem = 536878749 peak = 1018011648 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (36, 282861, 15, 65) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (185, 323, 701) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1733) [M::mem_pestat] mean and std.dev: (428.29, 363.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2249) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (208, 329, 464) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 976) [M::mem_pestat] mean and std.dev: (346.88, 168.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1232) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (573, 4519, 4519) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 12411) [M::mem_pestat] mean and std.dev: (3320.93, 2737.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 16357) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (199, 327, 449) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 949) [M::mem_pestat] mean and std.dev: (311.30, 132.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1199) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 680794 sequences (100000011 bp) in 2.400 CPU sec, 2.511 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (43, 282408, 10, 48) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (291, 349, 473) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 837) [M::mem_pestat] mean and std.dev: (335.74, 122.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1019) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (223, 345, 473) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 973) [M::mem_pestat] mean and std.dev: (357.91, 166.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1223) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (156, 1759, 1759) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4965) [M::mem_pestat] mean and std.dev: (1176.70, 805.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6568) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (243, 311, 419) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 771) [M::mem_pestat] mean and std.dev: (282.45, 87.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 947) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 681814 reads in 151.206 CPU sec, 4.812 real sec sorting block 117, #reads = 1074577 mem = 536879205 peak = 1018011648 [M::mem_process_seqs] Processed 679310 reads in 96.255 CPU sec, 3.027 real sec [M::process] read 682932 sequences (100000199 bp) in 2.038 CPU sec, 2.090 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (44, 282209, 12, 35) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (115, 218, 315) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 715) [M::mem_pestat] mean and std.dev: (221.39, 116.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 915) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (212, 334, 465) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 971) [M::mem_pestat] mean and std.dev: (349.36, 166.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1224) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (31, 828, 2079) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6175) [M::mem_pestat] mean and std.dev: (849.67, 906.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8223) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (215, 270, 466) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 968) [M::mem_pestat] mean and std.dev: (278.93, 103.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1219) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 118, #reads = 1074168 mem = 536884576 peak = 1018011648 [M::process] read 683182 sequences (100000209 bp) in 2.567 CPU sec, 2.715 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (42, 283270, 26, 42) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (159, 258, 342) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 708) [M::mem_pestat] mean and std.dev: (245.40, 106.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 891) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (202, 315, 445) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 931) [M::mem_pestat] mean and std.dev: (334.19, 161.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1174) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (398, 678, 1431) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3497) [M::mem_pestat] mean and std.dev: (892.54, 787.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4530) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (235, 336, 393) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 709) [M::mem_pestat] mean and std.dev: (332.95, 135.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 874) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 680794 reads in 158.812 CPU sec, 5.058 real sec [M::mem_process_seqs] Processed 682932 reads in 103.181 CPU sec, 3.252 real sec [M::process] read 683320 sequences (100000285 bp) in 2.185 CPU sec, 2.225 real sec... sorting block 119, #reads = 1074136 mem = 536880413 peak = 1018011648 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (38, 283388, 11, 44) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (200, 320, 376) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 728) [M::mem_pestat] mean and std.dev: (277.27, 122.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 904) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (202, 314, 441) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 919) [M::mem_pestat] mean and std.dev: (332.36, 160.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1158) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (965, 965, 1606) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2888) [M::mem_pestat] mean and std.dev: (1041.45, 746.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4028) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (200, 327, 394) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 782) [M::mem_pestat] mean and std.dev: (297.65, 108.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 976) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 682744 sequences (100000093 bp) in 2.460 CPU sec, 2.604 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (31, 283986, 6, 50) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (181, 251, 612) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1474) [M::mem_pestat] mean and std.dev: (401.58, 353.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1905) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (200, 312, 441) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 923) [M::mem_pestat] mean and std.dev: (331.18, 159.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1164) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (205, 380, 635) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1495) [M::mem_pestat] mean and std.dev: (370.82, 179.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1925) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 683182 reads in 160.960 CPU sec, 5.126 real sec [M::process] read 682236 sequences (100000176 bp) in 1.759 CPU sec, 1.779 real sec... sorting block 120, #reads = 1075484 mem = 536882638 peak = 1018011648 [M::process] read 682526 sequences (100000164 bp) in 1.906 CPU sec, 1.907 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (29, 283102, 9, 39) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (173, 390, 435) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 959) [M::mem_pestat] mean and std.dev: (340.79, 152.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1221) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (205, 319, 451) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 943) [M::mem_pestat] mean and std.dev: (338.67, 163.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1189) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (233, 294, 999) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2531) [M::mem_pestat] mean and std.dev: (543.00, 423.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3297) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 682236 reads in 81.775 CPU sec, 2.790 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (33, 283271, 11, 44) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (173, 226, 318) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 608) [M::mem_pestat] mean and std.dev: (251.88, 121.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 753) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (203, 316, 444) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 926) [M::mem_pestat] mean and std.dev: (334.06, 160.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1167) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (73, 97, 539) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1471) [M::mem_pestat] mean and std.dev: (246.20, 429.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1965) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (127, 420, 663) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1735) [M::mem_pestat] mean and std.dev: (419.27, 302.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2271) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 682744 reads in 172.721 CPU sec, 6.258 real sec sorting block 121, #reads = 1074408 mem = 536879625 peak = 1018011648 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (55, 283184, 18, 60) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (172, 298, 324) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 628) [M::mem_pestat] mean and std.dev: (247.33, 86.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 780) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (205, 321, 453) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 949) [M::mem_pestat] mean and std.dev: (339.58, 164.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1197) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (585, 585, 823) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (109, 1299) [M::mem_pestat] mean and std.dev: (666.58, 157.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1537) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (250, 314, 667) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1501) [M::mem_pestat] mean and std.dev: (407.71, 267.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1918) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 683320 reads in 363.353 CPU sec, 12.332 real sec [M::process] read 681124 sequences (100000017 bp) in 3.266 CPU sec, 3.470 real sec... [M::mem_process_seqs] Processed 682526 reads in 107.822 CPU sec, 3.470 real sec sorting block 122, #reads = 1074118 mem = 536878953 peak = 1018011648 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (52, 282507, 9, 34) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (226, 375, 627) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1429) [M::mem_pestat] mean and std.dev: (427.73, 292.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1830) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (212, 332, 464) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 968) [M::mem_pestat] mean and std.dev: (348.03, 166.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1220) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (173, 307, 434) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 956) [M::mem_pestat] mean and std.dev: (301.91, 140.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1217) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 681124 reads in 93.659 CPU sec, 3.288 real sec [M::process] read 679978 sequences (100000163 bp) in 3.189 CPU sec, 3.435 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (48, 282876, 29, 37) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (177, 266, 411) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 879) [M::mem_pestat] mean and std.dev: (286.46, 129.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1113) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (217, 340, 470) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 976) [M::mem_pestat] mean and std.dev: (354.09, 167.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1229) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (1109, 1109, 2360) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4862) [M::mem_pestat] mean and std.dev: (1372.61, 797.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6113) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (221, 286, 353) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 617) [M::mem_pestat] mean and std.dev: (273.46, 93.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 749) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 123, #reads = 1074734 mem = 536877453 peak = 1018011648 [M::process] read 682616 sequences (100000011 bp) in 2.710 CPU sec, 2.873 real sec... [M::mem_process_seqs] Processed 679978 reads in 91.063 CPU sec, 3.014 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (43, 282422, 10, 31) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (182, 288, 598) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1430) [M::mem_pestat] mean and std.dev: (339.55, 196.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1846) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (205, 320, 449) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 937) [M::mem_pestat] mean and std.dev: (338.33, 163.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1181) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (76, 499, 937) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2659) [M::mem_pestat] mean and std.dev: (555.30, 482.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3520) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (240, 293, 439) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 837) [M::mem_pestat] mean and std.dev: (315.89, 148.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1036) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 682226 sequences (100000040 bp) in 2.557 CPU sec, 2.740 real sec... [M::mem_process_seqs] Processed 682616 reads in 90.375 CPU sec, 2.958 real sec sorting block 124, #reads = 1073251 mem = 536881517 peak = 1018011648 [M::process] read 682052 sequences (100000137 bp) in 2.363 CPU sec, 2.478 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (34, 283117, 12, 48) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (155, 249, 374) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 812) [M::mem_pestat] mean and std.dev: (277.41, 141.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1031) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (206, 321, 451) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 941) [M::mem_pestat] mean and std.dev: (339.56, 163.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1186) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (956, 2039, 5417) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 14339) [M::mem_pestat] mean and std.dev: (2669.67, 2527.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 18800) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (221, 340, 604) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1370) [M::mem_pestat] mean and std.dev: (437.28, 315.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1753) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 681834 sequences (100000099 bp) in 1.780 CPU sec, 1.785 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (49, 282599, 6, 44) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (180, 254, 397) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 831) [M::mem_pestat] mean and std.dev: (284.21, 148.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1048) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (206, 321, 452) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 944) [M::mem_pestat] mean and std.dev: (339.58, 163.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1190) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (260, 333, 391) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 653) [M::mem_pestat] mean and std.dev: (309.56, 100.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 784) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 682226 reads in 161.406 CPU sec, 5.070 real sec [M::mem_process_seqs] Processed 682052 reads in 104.089 CPU sec, 3.264 real sec sorting block 125, #reads = 1074442 mem = 536881747 peak = 1018011648 [M::process] read 681762 sequences (100000226 bp) in 2.206 CPU sec, 2.273 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (52, 282815, 5, 33) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (156, 251, 789) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2055) [M::mem_pestat] mean and std.dev: (525.48, 577.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2836) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (207, 324, 457) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 957) [M::mem_pestat] mean and std.dev: (342.98, 165.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1207) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (189, 254, 469) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1029) [M::mem_pestat] mean and std.dev: (302.17, 195.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1309) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 681640 sequences (100000222 bp) in 2.594 CPU sec, 2.736 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (46, 282582, 23, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (141, 212, 368) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 822) [M::mem_pestat] mean and std.dev: (254.09, 125.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1049) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (208, 326, 463) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 973) [M::mem_pestat] mean and std.dev: (346.37, 168.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1228) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (434, 1376, 6948) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 19976) [M::mem_pestat] mean and std.dev: (2721.04, 2840.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 26490) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (227, 423, 476) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 974) [M::mem_pestat] mean and std.dev: (372.70, 212.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1223) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 681834 reads in 162.339 CPU sec, 5.153 real sec sorting block 126, #reads = 1073785 mem = 536877633 peak = 1018011648 [M::process] read 681936 sequences (100000087 bp) in 1.976 CPU sec, 2.004 real sec... [M::mem_process_seqs] Processed 681762 reads in 105.524 CPU sec, 3.324 real sec sorting block 127, #reads = 1073247 mem = 536880237 peak = 1019666432 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (61, 282480, 4, 53) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (246, 395, 1127) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2889) [M::mem_pestat] mean and std.dev: (592.03, 557.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3770) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (207, 325, 461) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 969) [M::mem_pestat] mean and std.dev: (344.60, 167.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1223) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (219, 243, 566) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1260) [M::mem_pestat] mean and std.dev: (329.55, 183.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1607) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 681966 sequences (100000199 bp) in 2.733 CPU sec, 2.871 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (57, 282482, 6, 54) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (151, 260, 419) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 955) [M::mem_pestat] mean and std.dev: (293.50, 187.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1223) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (207, 326, 462) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 972) [M::mem_pestat] mean and std.dev: (345.88, 169.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1227) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (183, 263, 404) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 846) [M::mem_pestat] mean and std.dev: (289.17, 117.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1067) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 681746 sequences (100000251 bp) in 1.760 CPU sec, 1.761 real sec... [M::mem_process_seqs] Processed 681640 reads in 165.622 CPU sec, 5.251 real sec [M::mem_process_seqs] Processed 681936 reads in 106.574 CPU sec, 3.369 real sec sorting block 128, #reads = 1072159 mem = 536881102 peak = 1019666432 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (47, 283063, 11, 56) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (163, 319, 437) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 985) [M::mem_pestat] mean and std.dev: (309.82, 186.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1259) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (207, 326, 465) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 981) [M::mem_pestat] mean and std.dev: (346.77, 170.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1239) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (9, 138, 622) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1848) [M::mem_pestat] mean and std.dev: (271.60, 315.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2461) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (175, 237, 388) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 814) [M::mem_pestat] mean and std.dev: (257.41, 136.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1027) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 681826 sequences (100000160 bp) in 2.765 CPU sec, 2.950 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (57, 282704, 20, 55) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (188, 242, 431) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 917) [M::mem_pestat] mean and std.dev: (235.00, 91.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1160) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (207, 324, 463) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 975) [M::mem_pestat] mean and std.dev: (345.17, 169.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1231) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (728, 993, 1539) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3161) [M::mem_pestat] mean and std.dev: (1062.00, 408.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3972) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (239, 432, 546) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1160) [M::mem_pestat] mean and std.dev: (388.63, 208.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1467) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 681966 reads in 164.066 CPU sec, 5.202 real sec [M::process] read 682588 sequences (100000035 bp) in 1.878 CPU sec, 1.876 real sec... [M::mem_process_seqs] Processed 681746 reads in 106.502 CPU sec, 3.361 real sec sorting block 129, #reads = 1071257 mem = 536881546 peak = 1019666432 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (37, 282250, 18, 62) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (212, 288, 468) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 980) [M::mem_pestat] mean and std.dev: (295.53, 120.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1236) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (207, 324, 465) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 981) [M::mem_pestat] mean and std.dev: (346.51, 170.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1239) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (665, 983, 1648) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3614) [M::mem_pestat] mean and std.dev: (1073.50, 761.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4597) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (266, 512, 833) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1967) [M::mem_pestat] mean and std.dev: (528.50, 335.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2534) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 683138 sequences (100000043 bp) in 2.529 CPU sec, 2.641 real sec... [M::process] read 685012 sequences (100000100 bp) in 1.410 CPU sec, 1.411 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (41, 282684, 8, 36) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (203, 333, 1100) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2894) [M::mem_pestat] mean and std.dev: (630.12, 690.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3791) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (203, 317, 456) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 962) [M::mem_pestat] mean and std.dev: (341.08, 169.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1215) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (191, 284, 462) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1004) [M::mem_pestat] mean and std.dev: (311.30, 183.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1275) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 681826 reads in 157.620 CPU sec, 5.017 real sec sorting block 130, #reads = 1071233 mem = 536878196 peak = 1019666432 [M::mem_process_seqs] Processed 682588 reads in 98.651 CPU sec, 3.129 real sec sorting block 131, #reads = 1070649 mem = 536881244 peak = 1019666432 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (54, 282960, 11, 69) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (172, 246, 424) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 928) [M::mem_pestat] mean and std.dev: (288.29, 161.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1180) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (199, 310, 447) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 943) [M::mem_pestat] mean and std.dev: (335.37, 167.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1191) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (66, 449, 2482) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7314) [M::mem_pestat] mean and std.dev: (1207.64, 1560.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9730) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (233, 414, 695) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1619) [M::mem_pestat] mean and std.dev: (452.27, 321.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2081) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 685910 sequences (100000283 bp) in 2.179 CPU sec, 2.295 real sec... [M::process] read 684908 sequences (100000026 bp) in 1.460 CPU sec, 1.453 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (40, 283986, 19, 49) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (154, 217, 360) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 772) [M::mem_pestat] mean and std.dev: (244.26, 108.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 978) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (194, 305, 441) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 935) [M::mem_pestat] mean and std.dev: (328.85, 164.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1182) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (189, 1627, 2345) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6657) [M::mem_pestat] mean and std.dev: (1322.89, 965.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8813) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (214, 309, 552) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1228) [M::mem_pestat] mean and std.dev: (378.38, 237.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1566) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 683138 reads in 172.292 CPU sec, 5.485 real sec [M::mem_process_seqs] Processed 685012 reads in 117.773 CPU sec, 3.758 real sec sorting block 132, #reads = 1065520 mem = 536877811 peak = 1019666432 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (39, 284587, 4, 61) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (235, 307, 482) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 976) [M::mem_pestat] mean and std.dev: (342.76, 185.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1223) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (192, 304, 435) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 921) [M::mem_pestat] mean and std.dev: (323.14, 156.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1164) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (201, 323, 439) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 915) [M::mem_pestat] mean and std.dev: (313.42, 132.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1153) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 686190 sequences (100000170 bp) in 2.956 CPU sec, 3.080 real sec... [M::process] read 685058 sequences (100000078 bp) in 1.860 CPU sec, 1.860 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (44, 283606, 14, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (306, 459, 663) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1377) [M::mem_pestat] mean and std.dev: (417.12, 192.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1734) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (195, 308, 439) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 927) [M::mem_pestat] mean and std.dev: (325.93, 156.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1171) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (288, 752, 1389) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3591) [M::mem_pestat] mean and std.dev: (749.58, 618.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4692) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (176, 342, 481) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1091) [M::mem_pestat] mean and std.dev: (368.90, 232.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1396) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 685910 reads in 181.959 CPU sec, 5.774 real sec [M::mem_process_seqs] Processed 684908 reads in 118.368 CPU sec, 3.754 real sec sorting block 133, #reads = 1067308 mem = 536879419 peak = 1019666432 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 284222, 23, 41) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (170, 217, 244) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (22, 392) [M::mem_pestat] mean and std.dev: (205.44, 47.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 466) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (190, 298, 426) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 898) [M::mem_pestat] mean and std.dev: (317.62, 153.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1134) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (1458, 2432, 2432) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4380) [M::mem_pestat] mean and std.dev: (1839.71, 1027.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5951) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (177, 212, 542) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1272) [M::mem_pestat] mean and std.dev: (318.82, 217.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1637) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 681958 sequences (100000074 bp) in 2.746 CPU sec, 2.874 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (36, 283953, 12, 62) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (221, 343, 1019) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2615) [M::mem_pestat] mean and std.dev: (473.80, 416.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3413) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (195, 305, 434) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 912) [M::mem_pestat] mean and std.dev: (324.10, 156.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1151) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (163, 502, 1143) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3103) [M::mem_pestat] mean and std.dev: (528.82, 494.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4083) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (219, 309, 462) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 948) [M::mem_pestat] mean and std.dev: (323.04, 176.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1191) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 685024 sequences (100000041 bp) in 1.850 CPU sec, 1.844 real sec... [M::mem_process_seqs] Processed 686190 reads in 180.043 CPU sec, 5.719 real sec [M::mem_process_seqs] Processed 685058 reads in 115.210 CPU sec, 3.648 real sec sorting block 134, #reads = 1066698 mem = 536880376 peak = 1019666432 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (66, 282841, 4, 43) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (218, 365, 623) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1433) [M::mem_pestat] mean and std.dev: (461.17, 332.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1838) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (210, 333, 462) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 966) [M::mem_pestat] mean and std.dev: (344.78, 162.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1218) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (271, 376, 442) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 784) [M::mem_pestat] mean and std.dev: (333.97, 111.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 955) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 684980 sequences (100000083 bp) in 2.527 CPU sec, 2.674 real sec... [M::process] read 686122 sequences (100000150 bp) in 1.490 CPU sec, 1.490 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (33, 283924, 17, 48) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (187, 372, 1108) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2950) [M::mem_pestat] mean and std.dev: (526.65, 465.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3871) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (194, 305, 436) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 920) [M::mem_pestat] mean and std.dev: (325.19, 158.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1162) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (384, 1308, 1708) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4356) [M::mem_pestat] mean and std.dev: (1043.12, 551.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5680) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (251, 465, 921) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2261) [M::mem_pestat] mean and std.dev: (579.91, 488.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2931) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 681958 reads in 171.814 CPU sec, 5.467 real sec sorting block 135, #reads = 1069095 mem = 536882321 peak = 1019666432 [M::mem_process_seqs] Processed 685024 reads in 108.801 CPU sec, 3.465 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (55, 283876, 7, 39) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (207, 247, 471) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 999) [M::mem_pestat] mean and std.dev: (280.67, 133.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1263) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (194, 307, 439) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 929) [M::mem_pestat] mean and std.dev: (327.03, 159.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1174) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (194, 267, 436) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 920) [M::mem_pestat] mean and std.dev: (271.06, 110.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1162) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 136, #reads = 1068597 mem = 536879020 peak = 1019666432 [M::process] read 685904 sequences (100000057 bp) in 3.061 CPU sec, 3.207 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (44, 284638, 4, 58) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (171, 205, 337) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 669) [M::mem_pestat] mean and std.dev: (221.19, 96.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 835) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (190, 297, 427) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 901) [M::mem_pestat] mean and std.dev: (318.58, 155.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1138) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (199, 283, 548) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1246) [M::mem_pestat] mean and std.dev: (318.89, 158.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1595) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 684670 sequences (100000197 bp) in 1.710 CPU sec, 1.711 real sec... [M::mem_process_seqs] Processed 684980 reads in 169.095 CPU sec, 5.362 real sec [M::mem_process_seqs] Processed 686122 reads in 109.502 CPU sec, 3.467 real sec sorting block 137, #reads = 1072172 mem = 536884571 peak = 1019666432 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (30, 284484, 7, 44) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (137, 255, 476) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1154) [M::mem_pestat] mean and std.dev: (240.56, 125.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1493) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (192, 297, 421) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 879) [M::mem_pestat] mean and std.dev: (315.95, 151.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1108) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (242, 414, 1232) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3212) [M::mem_pestat] mean and std.dev: (630.58, 589.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4202) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 683892 sequences (100000283 bp) in 3.433 CPU sec, 3.584 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (51, 284029, 10, 47) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (171, 247, 548) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1302) [M::mem_pestat] mean and std.dev: (309.61, 226.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1679) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (195, 303, 429) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 897) [M::mem_pestat] mean and std.dev: (322.12, 154.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1131) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (247, 1149, 2012) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5542) [M::mem_pestat] mean and std.dev: (1382.80, 1249.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7307) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (242, 313, 620) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1376) [M::mem_pestat] mean and std.dev: (343.97, 175.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1754) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 685904 reads in 172.798 CPU sec, 5.495 real sec [M::mem_process_seqs] Processed 684670 reads in 109.061 CPU sec, 3.441 real sec [M::process] read 681496 sequences (100000155 bp) in 1.970 CPU sec, 2.017 real sec... sorting block 138, #reads = 1071700 mem = 536878996 peak = 1019666432 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (40, 283837, 19, 49) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (204, 257, 413) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 831) [M::mem_pestat] mean and std.dev: (269.82, 109.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1040) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (199, 309, 435) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 907) [M::mem_pestat] mean and std.dev: (326.60, 155.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1143) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (409, 951, 1488) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3646) [M::mem_pestat] mean and std.dev: (829.26, 600.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4725) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (174, 331, 503) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1161) [M::mem_pestat] mean and std.dev: (324.22, 162.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1490) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 682650 sequences (100000296 bp) in 3.066 CPU sec, 3.221 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (64, 282540, 5, 39) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (235, 355, 437) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 841) [M::mem_pestat] mean and std.dev: (317.47, 126.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1043) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (209, 327, 454) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 944) [M::mem_pestat] mean and std.dev: (341.35, 160.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1189) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (182, 329, 531) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1229) [M::mem_pestat] mean and std.dev: (395.11, 301.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1599) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 683892 reads in 170.810 CPU sec, 5.445 real sec [M::mem_process_seqs] Processed 681496 reads in 109.769 CPU sec, 3.466 real sec [M::process] read 683384 sequences (100000060 bp) in 2.232 CPU sec, 2.286 real sec... sorting block 139, #reads = 1072526 mem = 536880546 peak = 1019666432 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (35, 283353, 7, 42) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (155, 206, 531) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1283) [M::mem_pestat] mean and std.dev: (312.44, 220.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1659) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (203, 317, 442) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 920) [M::mem_pestat] mean and std.dev: (332.68, 157.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1159) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (258, 384, 653) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1443) [M::mem_pestat] mean and std.dev: (422.03, 236.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1838) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 140, #reads = 1071099 mem = 536879412 peak = 1019666432 [M::process] read 683070 sequences (100000226 bp) in 2.653 CPU sec, 2.773 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (39, 283148, 10, 54) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (186, 259, 459) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1005) [M::mem_pestat] mean and std.dev: (282.23, 132.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1278) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (201, 313, 440) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 918) [M::mem_pestat] mean and std.dev: (330.57, 157.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1157) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (625, 1557, 1716) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3898) [M::mem_pestat] mean and std.dev: (1197.67, 789.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4989) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (197, 376, 714) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1748) [M::mem_pestat] mean and std.dev: (442.28, 395.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2265) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 682650 reads in 165.400 CPU sec, 5.263 real sec [M::process] read 682414 sequences (100000272 bp) in 1.988 CPU sec, 2.019 real sec... [M::mem_process_seqs] Processed 683384 reads in 107.114 CPU sec, 3.371 real sec sorting block 141, #reads = 1071586 mem = 536881776 peak = 1019666432 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (38, 283126, 10, 39) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (185, 281, 763) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1919) [M::mem_pestat] mean and std.dev: (438.12, 419.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2497) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (202, 314, 442) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 922) [M::mem_pestat] mean and std.dev: (331.82, 158.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1162) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (115, 759, 762) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2056) [M::mem_pestat] mean and std.dev: (531.80, 310.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2703) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (176, 268, 479) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1085) [M::mem_pestat] mean and std.dev: (284.18, 153.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1388) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 682892 sequences (100000106 bp) in 2.692 CPU sec, 2.815 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (49, 282655, 12, 43) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (208, 323, 520) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1144) [M::mem_pestat] mean and std.dev: (412.30, 303.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1626) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (204, 319, 447) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 933) [M::mem_pestat] mean and std.dev: (336.04, 160.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1176) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (554, 6525, 6525) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 18467) [M::mem_pestat] mean and std.dev: (3527.75, 3015.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 24438) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (244, 342, 610) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1342) [M::mem_pestat] mean and std.dev: (430.75, 273.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1708) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 682520 sequences (100000121 bp) in 1.370 CPU sec, 1.375 real sec... [M::mem_process_seqs] Processed 683070 reads in 160.065 CPU sec, 5.094 real sec [M::mem_process_seqs] Processed 682414 reads in 101.512 CPU sec, 3.214 real sec sorting block 142, #reads = 1072328 mem = 536876442 peak = 1019666432 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (71, 282727, 9, 54) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (235, 315, 457) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 901) [M::mem_pestat] mean and std.dev: (295.81, 100.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1123) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (203, 315, 443) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 923) [M::mem_pestat] mean and std.dev: (333.22, 159.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1163) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (212, 371, 475) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1001) [M::mem_pestat] mean and std.dev: (335.87, 170.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1264) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 682336 sequences (100000034 bp) in 2.331 CPU sec, 2.483 real sec... [M::process] read 682284 sequences (100000010 bp) in 1.380 CPU sec, 1.378 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (39, 282371, 18, 37) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (179, 298, 400) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 842) [M::mem_pestat] mean and std.dev: (293.62, 138.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1063) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (204, 319, 450) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 942) [M::mem_pestat] mean and std.dev: (337.76, 162.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1188) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (123, 123, 2140) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6174) [M::mem_pestat] mean and std.dev: (773.89, 982.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8191) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (227, 376, 483) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 995) [M::mem_pestat] mean and std.dev: (355.17, 151.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1251) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 682892 reads in 151.040 CPU sec, 4.809 real sec [M::mem_process_seqs] Processed 682520 reads in 95.173 CPU sec, 3.024 real sec sorting block 143, #reads = 1073107 mem = 536880129 peak = 1019666432 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (44, 281948, 8, 40) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (168, 251, 644) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1596) [M::mem_pestat] mean and std.dev: (369.18, 316.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2072) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (205, 319, 448) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 934) [M::mem_pestat] mean and std.dev: (336.66, 161.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1177) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (184, 285, 366) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 730) [M::mem_pestat] mean and std.dev: (273.32, 100.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 912) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 682082 sequences (100000276 bp) in 2.166 CPU sec, 2.289 real sec... [M::process] read 681968 sequences (100000207 bp) in 1.370 CPU sec, 1.375 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (43, 282213, 6, 58) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (180, 197, 474) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1062) [M::mem_pestat] mean and std.dev: (311.17, 196.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1356) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (205, 318, 449) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 937) [M::mem_pestat] mean and std.dev: (337.38, 162.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1181) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (233, 322, 390) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 704) [M::mem_pestat] mean and std.dev: (309.00, 122.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 861) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 682336 reads in 147.234 CPU sec, 4.679 real sec sorting block 144, #reads = 1072769 mem = 536879671 peak = 1019666432 [M::mem_process_seqs] Processed 682284 reads in 92.184 CPU sec, 2.928 real sec sorting block 145, #reads = 1073208 mem = 536883441 peak = 1019666432 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (30, 282193, 7, 64) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (211, 296, 719) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1735) [M::mem_pestat] mean and std.dev: (365.31, 230.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2243) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (205, 320, 452) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 946) [M::mem_pestat] mean and std.dev: (339.34, 163.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1193) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (181, 286, 416) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 886) [M::mem_pestat] mean and std.dev: (322.43, 188.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1121) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 681964 sequences (100000097 bp) in 2.275 CPU sec, 2.396 real sec... [M::process] read 681718 sequences (100000010 bp) in 1.410 CPU sec, 1.401 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (35, 282643, 9, 61) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (169, 211, 276) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 490) [M::mem_pestat] mean and std.dev: (209.10, 84.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 597) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (206, 321, 453) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 947) [M::mem_pestat] mean and std.dev: (340.49, 164.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1194) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (224, 361, 459) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 929) [M::mem_pestat] mean and std.dev: (354.00, 143.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1164) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 682082 reads in 145.741 CPU sec, 4.629 real sec [M::mem_process_seqs] Processed 681968 reads in 92.094 CPU sec, 2.920 real sec sorting block 146, #reads = 1071898 mem = 536878741 peak = 1019666432 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (40, 282598, 8, 67) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (208, 307, 382) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 730) [M::mem_pestat] mean and std.dev: (293.83, 119.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 904) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (206, 321, 456) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 956) [M::mem_pestat] mean and std.dev: (341.69, 166.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1206) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (194, 250, 383) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 761) [M::mem_pestat] mean and std.dev: (271.59, 140.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 950) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 683082 sequences (100000180 bp) in 2.214 CPU sec, 2.329 real sec... [M::process] read 35568 sequences (5190484 bp) in 0.300 CPU sec, 0.307 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (55, 282027, 29, 44) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (198, 260, 479) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1041) [M::mem_pestat] mean and std.dev: (338.19, 227.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1322) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (207, 324, 458) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 960) [M::mem_pestat] mean and std.dev: (343.84, 167.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1211) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (179, 763, 2491) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7115) [M::mem_pestat] mean and std.dev: (727.84, 789.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9427) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (187, 270, 388) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 790) [M::mem_pestat] mean and std.dev: (254.49, 113.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 991) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 681964 reads in 143.080 CPU sec, 4.578 real sec [M::mem_process_seqs] Processed 681718 reads in 89.651 CPU sec, 2.875 real sec sorting block 147, #reads = 1073012 mem = 536878455 peak = 1019666432 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (46, 282834, 17, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (149, 266, 366) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 800) [M::mem_pestat] mean and std.dev: (258.95, 125.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1017) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (200, 313, 449) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 947) [M::mem_pestat] mean and std.dev: (336.55, 167.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1196) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (107, 233, 2023) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5855) [M::mem_pestat] mean and std.dev: (817.50, 1326.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7771) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (211, 290, 693) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1657) [M::mem_pestat] mean and std.dev: (368.34, 276.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2139) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (3, 14653, 0, 1) [M::mem_pestat] skip orientation FF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (193, 300, 435) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 919) [M::mem_pestat] mean and std.dev: (324.03, 161.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1161) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] skip orientation RR as there are not enough pairs [M::mem_process_seqs] Processed 683082 reads in 82.133 CPU sec, 2.668 real sec [M::mem_process_seqs] Processed 35568 reads in 17.745 CPU sec, 0.574 real sec sorting block 148, #reads = 1073001 mem = 536881252 peak = 1034162176 os version: Linux 6.12.88 cpu vendor: GenuineIntel signature: 000a06d1 features: 1f8bfbff fffab20b extended: f1bf27eb 1b407f7e amd bits: 2c100800 00000121 brand: Intel(R) Xeon(R) 6975P-C threads: 31 algo: bwa-mem license: sentieon:klib=31 reads: 159412580 overall: 70030106624 mem 22985.168 user 552.676 sys 770.067 real [main] Version: 0.7.17-r1188 [main] CMD: /opt/conda/share/sentieon-202308.03-3/libexec/bwa mem -K 100000000 -Y -R @RG\tID:A23MHWWLT4.1136_3MV-T1-TDNA-1_A23MHWWLT4_1.L008\tPU:L008\tSM:1136_3MV-T1-TDNA-1_A23MHWWLT4_1\tLB:1136_3MV-T1-TDNA-1_A23MHWWLT4_1\tDS:s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta\tPL:ILLUMINA -t 31 ./BWAIndex/Homo_sapiens_assembly38.fasta.64 1136_3MV-T1-TDNA-1_A23MHWWLT4_1_R1.fastq.gz 1136_3MV-T1-TDNA-1_A23MHWWLT4_1_R2.fastq.gz [main] Real time: 770.107 sec; CPU: 23537.852 sec sorting block 149, #reads = 447370 mem = 224042325 peak = 1034162176 uniq header count 1 merging 150 blocks sw version: sentieon-genomics-202308.03 os version: Linux 6.12.88 cpu vendor: GenuineIntel signature: 000a06d1 features: 1f8bfbff fffab20b extended: f1bf27eb 1b407f7e amd bits: 2c100800 00000121 brand: Intel(R) Xeon(R) 6975P-C threads: 31 max 192 algo: util-sort license: sentieon:util=1 output file size: 8904559167 output reads: 160516587 bam_mem_sort: 150 calls 84.548 user 1.693 sys 87.598 real bam_write: 150 calls 43.482 user 2.431 sys 59.540 real execute: 1 calls 32.391 user 2.190 sys 820.630 real merge_files: 1 calls 32.380 user 2.148 sys 50.034 real parse_chunk: 2391 calls 101.959 user 25.785 sys 135.396 real read_chunk: 6449 calls 49.329 user 43.847 sys 713.668 real sort_block: 1 calls 35.905 user 43.145 sys 692.508 real write_chunk: 4056 calls 31.963 user 1.837 sys 49.008 real overall: 3309309952 mem 2000.390 user 91.556 sys 820.652 real ls: cannot access '*.cram': No such file or directory