This software is licensed to bgold@natera.com by Sentieon Inc. cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/util sort -r Homo_sapiens_assembly38.fasta -t 31 -o 1029_IWL-T1-TDNA-1_A23MHWWLT4_1.bam --sam2bam - This software is licensed to bgold@natera.com by Sentieon Inc. version: sentieon-genomics-202308.03 [M::bwa_idx_load_from_disk] read 3171 ALT contigs [M::main_mem] bwa index loaded in 1661.239 CPU sec, 62.378 real sec [M::process] read 769340 sequences (100000224 bp) in 1.236 CPU sec, 1.244 real sec... [M::process] read 769366 sequences (100000000 bp) in 1.586 CPU sec, 1.587 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (25, 304221, 16, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (165, 210, 1337) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3681) [M::mem_pestat] mean and std.dev: (566.17, 644.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4853) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (111, 148, 200) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 378) [M::mem_pestat] mean and std.dev: (160.17, 66.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 467) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (403, 989, 2374) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6316) [M::mem_pestat] mean and std.dev: (1167.69, 1076.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8287) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (218, 257, 570) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1274) [M::mem_pestat] mean and std.dev: (278.43, 129.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1626) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 768358 sequences (100000171 bp) in 1.489 CPU sec, 1.492 real sec... [M::process] read 766926 sequences (100000132 bp) in 1.540 CPU sec, 1.542 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 304532, 4, 11) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (111, 255, 1347) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3819) [M::mem_pestat] mean and std.dev: (639.44, 813.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5055) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (111, 148, 201) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 381) [M::mem_pestat] mean and std.dev: (160.63, 66.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 471) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (222, 293, 730) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1746) [M::mem_pestat] mean and std.dev: (386.55, 240.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2254) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 769340 reads in 207.588 CPU sec, 6.564 real sec [M::mem_process_seqs] Processed 769366 reads in 147.478 CPU sec, 4.742 real sec sorting block 0, #reads = 1111565 mem = 536883779 peak = 598134784 [M::process] read 766444 sequences (100000003 bp) in 2.720 CPU sec, 2.833 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (11, 304287, 7, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (136, 503, 1277) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3559) [M::mem_pestat] mean and std.dev: (834.00, 863.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4700) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (111, 148, 202) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 384) [M::mem_pestat] mean and std.dev: (161.20, 67.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 475) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (170, 316, 595) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1445) [M::mem_pestat] mean and std.dev: (325.00, 288.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1870) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 765722 sequences (100000145 bp) in 2.126 CPU sec, 2.132 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (24, 303798, 7, 11) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (161, 223, 649) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1625) [M::mem_pestat] mean and std.dev: (338.81, 315.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2113) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (112, 149, 203) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 385) [M::mem_pestat] mean and std.dev: (162.30, 67.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 476) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (162, 213, 268) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 480) [M::mem_pestat] mean and std.dev: (217.10, 95.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 599) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 303049, 5, 8) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (184, 286, 1445) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3967) [M::mem_pestat] mean and std.dev: (499.79, 565.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5228) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (112, 149, 204) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 388) [M::mem_pestat] mean and std.dev: (162.62, 68.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 480) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] skip orientation RR as there are not enough pairs [M::mem_pestat] skip orientation FF [M::mem_process_seqs] Processed 768358 reads in 303.274 CPU sec, 9.953 real sec sorting block 1, #reads = 1111822 mem = 536878540 peak = 758566912 [M::mem_process_seqs] Processed 766926 reads in 236.200 CPU sec, 7.597 real sec [M::mem_process_seqs] Processed 766444 reads in 268.949 CPU sec, 8.656 real sec [M::process] read 765002 sequences (100000127 bp) in 2.839 CPU sec, 2.990 real sec... sorting block 2, #reads = 1110301 mem = 536878545 peak = 758566912 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 303243, 11, 10) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (136, 158, 326) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 706) [M::mem_pestat] mean and std.dev: (163.15, 71.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 896) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (112, 150, 204) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 388) [M::mem_pestat] mean and std.dev: (162.66, 67.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 480) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (78, 229, 1116) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3192) [M::mem_pestat] mean and std.dev: (691.82, 736.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4230) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (161, 230, 605) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1493) [M::mem_pestat] mean and std.dev: (298.56, 233.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1937) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 763590 sequences (100000221 bp) in 2.764 CPU sec, 2.885 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (12, 302688, 10, 23) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (167, 508, 1201) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3269) [M::mem_pestat] mean and std.dev: (435.60, 365.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4303) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (112, 150, 204) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 388) [M::mem_pestat] mean and std.dev: (162.99, 68.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 480) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (26, 415, 1123) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3317) [M::mem_pestat] mean and std.dev: (273.62, 359.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4414) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (148, 316, 488) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1168) [M::mem_pestat] mean and std.dev: (332.10, 195.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1508) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 763940 sequences (100000142 bp) in 1.664 CPU sec, 1.672 real sec... [M::mem_process_seqs] Processed 765722 reads in 215.206 CPU sec, 6.843 real sec sorting block 3, #reads = 1110030 mem = 536879572 peak = 758566912 [M::mem_process_seqs] Processed 765002 reads in 152.699 CPU sec, 4.852 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 302811, 8, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (116, 220, 1222) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3434) [M::mem_pestat] mean and std.dev: (510.69, 627.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4540) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (113, 151, 205) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 389) [M::mem_pestat] mean and std.dev: (163.44, 67.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 481) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (178, 249, 462) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1030) [M::mem_pestat] mean and std.dev: (284.53, 145.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1314) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 763822 sequences (100000077 bp) in 3.382 CPU sec, 3.612 real sec... [M::process] read 763228 sequences (100000150 bp) in 1.740 CPU sec, 1.732 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (19, 302527, 5, 11) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (121, 157, 360) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 838) [M::mem_pestat] mean and std.dev: (239.17, 189.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1077) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (113, 151, 206) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 392) [M::mem_pestat] mean and std.dev: (164.10, 68.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 485) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (265, 337, 849) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2017) [M::mem_pestat] mean and std.dev: (369.44, 244.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2601) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 763940 reads in 215.170 CPU sec, 6.829 real sec sorting block 4, #reads = 1110575 mem = 536888647 peak = 758566912 [M::mem_process_seqs] Processed 763590 reads in 246.808 CPU sec, 7.865 real sec sorting block 5, #reads = 1109831 mem = 536878628 peak = 883666944 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (13, 302629, 11, 12) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (172, 319, 1122) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3022) [M::mem_pestat] mean and std.dev: (466.92, 401.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3972) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (113, 151, 205) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 389) [M::mem_pestat] mean and std.dev: (163.62, 68.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 481) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (121, 196, 674) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1780) [M::mem_pestat] mean and std.dev: (222.56, 182.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2333) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (149, 207, 550) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1352) [M::mem_pestat] mean and std.dev: (276.36, 226.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1753) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 762348 sequences (100000060 bp) in 3.183 CPU sec, 3.365 real sec... [M::process] read 761856 sequences (100000204 bp) in 2.089 CPU sec, 2.093 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 301780, 12, 23) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (189, 353, 1392) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3798) [M::mem_pestat] mean and std.dev: (584.50, 521.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5001) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (113, 151, 206) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 392) [M::mem_pestat] mean and std.dev: (164.35, 68.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 485) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (28, 132, 335) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 949) [M::mem_pestat] mean and std.dev: (179.18, 184.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1256) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (160, 223, 549) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1327) [M::mem_pestat] mean and std.dev: (310.85, 260.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1716) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 763822 reads in 208.010 CPU sec, 6.590 real sec [M::mem_process_seqs] Processed 763228 reads in 240.825 CPU sec, 7.666 real sec sorting block 6, #reads = 1109356 mem = 536881469 peak = 883666944 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (13, 302175, 4, 11) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (142, 169, 464) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1108) [M::mem_pestat] mean and std.dev: (255.25, 180.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1430) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (113, 152, 207) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 395) [M::mem_pestat] mean and std.dev: (165.09, 69.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 489) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (192, 233, 535) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1221) [M::mem_pestat] mean and std.dev: (232.89, 123.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1564) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 761920 sequences (100000018 bp) in 3.935 CPU sec, 4.210 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (8, 301809, 9, 27) [M::mem_pestat] skip orientation FF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (113, 152, 208) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 398) [M::mem_pestat] mean and std.dev: (165.68, 69.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 493) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (225, 453, 2016) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5598) [M::mem_pestat] mean and std.dev: (1324.33, 1527.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7435) [M::mem_pestat] skip orientation RR [M::process] read 765190 sequences (100000098 bp) in 1.976 CPU sec, 1.976 real sec... [M::mem_process_seqs] Processed 762348 reads in 213.230 CPU sec, 6.764 real sec sorting block 7, #reads = 1107399 mem = 536886527 peak = 883666944 [M::mem_process_seqs] Processed 761856 reads in 155.002 CPU sec, 4.920 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (12, 302380, 7, 19) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (203, 403, 2842) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 8120) [M::mem_pestat] mean and std.dev: (1031.17, 1103.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 10759) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (113, 152, 208) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 398) [M::mem_pestat] mean and std.dev: (165.47, 69.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 493) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (183, 230, 488) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1098) [M::mem_pestat] mean and std.dev: (326.33, 201.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1403) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 8, #reads = 1108106 mem = 536878843 peak = 883666944 [M::process] read 770654 sequences (100000104 bp) in 3.077 CPU sec, 3.208 real sec... [M::process] read 770442 sequences (100000189 bp) in 1.903 CPU sec, 1.916 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (7, 303036, 5, 19) [M::mem_pestat] skip orientation FF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (112, 150, 204) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 388) [M::mem_pestat] mean and std.dev: (162.91, 67.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 480) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (129, 218, 1708) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4866) [M::mem_pestat] mean and std.dev: (582.29, 646.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6445) [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 761920 reads in 209.454 CPU sec, 6.650 real sec [M::mem_process_seqs] Processed 765190 reads in 152.830 CPU sec, 4.877 real sec sorting block 9, #reads = 1108465 mem = 536878456 peak = 883666944 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (22, 305211, 15, 12) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (165, 294, 2360) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6750) [M::mem_pestat] mean and std.dev: (1424.64, 1898.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9018) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (110, 147, 200) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 380) [M::mem_pestat] mean and std.dev: (159.64, 66.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 470) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (594, 829, 1573) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3531) [M::mem_pestat] mean and std.dev: (857.14, 497.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4510) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (315, 842, 1561) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4053) [M::mem_pestat] mean and std.dev: (747.91, 746.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5299) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 769796 sequences (100000031 bp) in 3.478 CPU sec, 3.707 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (23, 304994, 11, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (199, 269, 1909) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5329) [M::mem_pestat] mean and std.dev: (640.85, 757.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7039) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (110, 147, 200) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 380) [M::mem_pestat] mean and std.dev: (159.88, 66.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 470) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (223, 559, 2836) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 8062) [M::mem_pestat] mean and std.dev: (1340.91, 1579.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 10675) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (154, 212, 580) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1432) [M::mem_pestat] mean and std.dev: (246.36, 142.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1858) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 768748 sequences (100000151 bp) in 2.246 CPU sec, 2.240 real sec... [M::mem_process_seqs] Processed 770654 reads in 209.421 CPU sec, 6.630 real sec sorting block 10, #reads = 1113888 mem = 536880888 peak = 883666944 [M::mem_process_seqs] Processed 770442 reads in 152.116 CPU sec, 4.828 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 304436, 13, 8) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (125, 214, 1016) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2798) [M::mem_pestat] mean and std.dev: (469.80, 494.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3689) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (111, 147, 201) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 381) [M::mem_pestat] mean and std.dev: (160.36, 66.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 471) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (225, 771, 2315) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6495) [M::mem_pestat] mean and std.dev: (1078.92, 1032.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8585) [M::mem_pestat] skip orientation RR as there are not enough pairs [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::process] read 767954 sequences (100000217 bp) in 3.340 CPU sec, 3.555 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 304901, 14, 10) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (162, 627, 3696) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 10764) [M::mem_pestat] mean and std.dev: (2038.12, 2663.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 14298) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (111, 148, 202) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 384) [M::mem_pestat] mean and std.dev: (161.06, 67.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 475) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (86, 223, 1017) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2879) [M::mem_pestat] mean and std.dev: (312.92, 343.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3810) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (136, 715, 1096) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3016) [M::mem_pestat] mean and std.dev: (660.56, 516.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3976) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 767250 sequences (100000281 bp) in 2.540 CPU sec, 2.543 real sec... [M::mem_process_seqs] Processed 769796 reads in 203.952 CPU sec, 6.441 real sec sorting block 11, #reads = 1115480 mem = 536883619 peak = 883666944 [M::mem_process_seqs] Processed 768748 reads in 147.808 CPU sec, 4.683 real sec sorting block 12, #reads = 1114823 mem = 536878910 peak = 883666944 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (14, 304045, 23, 23) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (152, 704, 1417) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3947) [M::mem_pestat] mean and std.dev: (720.50, 750.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5212) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (111, 149, 203) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 387) [M::mem_pestat] mean and std.dev: (161.68, 67.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 479) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (277, 492, 1166) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2944) [M::mem_pestat] mean and std.dev: (576.85, 382.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3833) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (203, 474, 1064) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2786) [M::mem_pestat] mean and std.dev: (583.64, 427.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3647) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 766096 sequences (100000101 bp) in 3.256 CPU sec, 3.404 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (14, 304026, 10, 13) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (147, 507, 1240) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3426) [M::mem_pestat] mean and std.dev: (610.15, 505.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4519) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (111, 149, 203) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 387) [M::mem_pestat] mean and std.dev: (161.92, 67.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 479) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (563, 1930, 2315) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5819) [M::mem_pestat] mean and std.dev: (1726.90, 1084.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7571) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (164, 172, 1389) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3839) [M::mem_pestat] mean and std.dev: (654.31, 793.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5064) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 765522 sequences (100000115 bp) in 2.069 CPU sec, 2.070 real sec... [M::mem_process_seqs] Processed 767954 reads in 210.431 CPU sec, 6.693 real sec [M::mem_process_seqs] Processed 767250 reads in 152.256 CPU sec, 4.836 real sec sorting block 13, #reads = 1114482 mem = 536879973 peak = 883666944 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 303323, 11, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (120, 184, 2022) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5826) [M::mem_pestat] mean and std.dev: (636.21, 870.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7728) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (112, 149, 203) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 385) [M::mem_pestat] mean and std.dev: (162.09, 67.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 476) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (1340, 1340, 1853) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (314, 2879) [M::mem_pestat] mean and std.dev: (1458.71, 405.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3392) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (164, 236, 237) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (18, 383) [M::mem_pestat] mean and std.dev: (186.67, 49.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 456) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 764882 sequences (100000285 bp) in 3.523 CPU sec, 3.692 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (23, 303438, 8, 23) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (127, 488, 1237) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3457) [M::mem_pestat] mean and std.dev: (617.09, 528.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4567) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (112, 150, 204) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 388) [M::mem_pestat] mean and std.dev: (162.66, 67.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 480) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (234, 745, 1349) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3579) [M::mem_pestat] mean and std.dev: (739.19, 606.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4694) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 764586 sequences (100000163 bp) in 2.060 CPU sec, 2.061 real sec... [M::mem_process_seqs] Processed 766096 reads in 209.034 CPU sec, 6.617 real sec sorting block 14, #reads = 1110723 mem = 536876734 peak = 883666944 [M::mem_process_seqs] Processed 765522 reads in 150.793 CPU sec, 4.785 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 302702, 8, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (113, 165, 1450) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4124) [M::mem_pestat] mean and std.dev: (501.06, 618.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5461) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (112, 150, 204) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 388) [M::mem_pestat] mean and std.dev: (162.88, 67.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 480) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (121, 190, 628) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1642) [M::mem_pestat] mean and std.dev: (307.00, 305.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2149) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 763582 sequences (100000169 bp) in 3.210 CPU sec, 3.362 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (22, 302586, 15, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (115, 210, 1578) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4504) [M::mem_pestat] mean and std.dev: (498.42, 577.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5967) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (112, 150, 205) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 391) [M::mem_pestat] mean and std.dev: (163.46, 68.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 484) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (489, 1380, 2293) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5901) [M::mem_pestat] mean and std.dev: (1466.21, 1128.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7705) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (138, 214, 524) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1296) [M::mem_pestat] mean and std.dev: (317.13, 288.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1682) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 763654 sequences (100000226 bp) in 2.019 CPU sec, 2.017 real sec... [M::mem_process_seqs] Processed 764882 reads in 205.752 CPU sec, 6.526 real sec sorting block 15, #reads = 1110723 mem = 536877827 peak = 883666944 [M::mem_process_seqs] Processed 764586 reads in 146.525 CPU sec, 4.658 real sec sorting block 16, #reads = 1110349 mem = 536885557 peak = 919900160 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 302287, 4, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (134, 542, 5604) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 16544) [M::mem_pestat] mean and std.dev: (2663.88, 3156.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 22014) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (113, 150, 205) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 389) [M::mem_pestat] mean and std.dev: (163.67, 68.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 481) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (180, 297, 698) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1734) [M::mem_pestat] mean and std.dev: (524.86, 458.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2358) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 763260 sequences (100000136 bp) in 3.787 CPU sec, 4.009 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 302536, 8, 17) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (136, 181, 840) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2248) [M::mem_pestat] mean and std.dev: (398.69, 463.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2952) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (113, 151, 206) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 392) [M::mem_pestat] mean and std.dev: (164.12, 68.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 485) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (126, 183, 586) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1506) [M::mem_pestat] mean and std.dev: (344.31, 303.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1966) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 763774 sequences (100000116 bp) in 2.360 CPU sec, 2.357 real sec... [M::mem_process_seqs] Processed 763582 reads in 208.566 CPU sec, 6.590 real sec [M::mem_process_seqs] Processed 763654 reads in 151.982 CPU sec, 4.808 real sec sorting block 17, #reads = 1108687 mem = 536886500 peak = 919900160 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (23, 302698, 14, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (405, 833, 4288) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 12054) [M::mem_pestat] mean and std.dev: (2086.52, 2412.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 15937) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (113, 151, 206) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 392) [M::mem_pestat] mean and std.dev: (164.27, 68.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 485) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (193, 356, 896) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2302) [M::mem_pestat] mean and std.dev: (488.00, 450.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3005) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (148, 499, 852) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2260) [M::mem_pestat] mean and std.dev: (502.33, 379.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2964) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 769718 sequences (100000048 bp) in 3.516 CPU sec, 3.649 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 302831, 10, 19) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (160, 300, 1061) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2863) [M::mem_pestat] mean and std.dev: (428.33, 419.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3764) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (113, 151, 205) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 389) [M::mem_pestat] mean and std.dev: (163.50, 68.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 481) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (91, 190, 844) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2350) [M::mem_pestat] mean and std.dev: (471.11, 699.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3268) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (153, 413, 1125) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3069) [M::mem_pestat] mean and std.dev: (599.21, 503.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4041) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 772218 sequences (100000096 bp) in 2.690 CPU sec, 2.693 real sec... [M::mem_process_seqs] Processed 763260 reads in 207.144 CPU sec, 6.534 real sec sorting block 18, #reads = 1109430 mem = 536878420 peak = 919900160 [M::mem_process_seqs] Processed 763774 reads in 151.602 CPU sec, 4.789 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (9, 304177, 11, 25) [M::mem_pestat] skip orientation FF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (111, 147, 200) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 378) [M::mem_pestat] mean and std.dev: (159.77, 65.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 467) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (338, 612, 6884) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 19976) [M::mem_pestat] mean and std.dev: (2681.55, 3565.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 26522) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (167, 289, 840) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2186) [M::mem_pestat] mean and std.dev: (461.18, 433.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2859) [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 19, #reads = 1109323 mem = 536883655 peak = 919900160 [M::process] read 771340 sequences (100000110 bp) in 3.416 CPU sec, 3.611 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (6, 305936, 14, 13) [M::mem_pestat] skip orientation FF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (110, 146, 199) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 377) [M::mem_pestat] mean and std.dev: (158.74, 65.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 466) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (27, 217, 571) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1659) [M::mem_pestat] mean and std.dev: (253.46, 255.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2203) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (136, 466, 1460) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4108) [M::mem_pestat] mean and std.dev: (763.23, 763.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5432) [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 769346 sequences (100000077 bp) in 2.601 CPU sec, 2.610 real sec... [M::mem_process_seqs] Processed 769718 reads in 207.867 CPU sec, 6.567 real sec [M::mem_process_seqs] Processed 772218 reads in 148.460 CPU sec, 4.700 real sec sorting block 20, #reads = 1111685 mem = 536877301 peak = 919900160 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 305256, 8, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (117, 153, 640) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1686) [M::mem_pestat] mean and std.dev: (364.75, 344.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2209) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (110, 147, 199) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 377) [M::mem_pestat] mean and std.dev: (159.22, 65.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 466) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (212, 621, 947) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2417) [M::mem_pestat] mean and std.dev: (637.81, 604.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3152) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 767764 sequences (100000149 bp) in 3.294 CPU sec, 3.449 real sec... [M::process] read 766816 sequences (100000237 bp) in 1.880 CPU sec, 1.873 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (6, 304848, 11, 13) [M::mem_pestat] skip orientation FF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (111, 148, 201) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 381) [M::mem_pestat] mean and std.dev: (160.74, 66.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 471) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (214, 242, 485) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1027) [M::mem_pestat] mean and std.dev: (316.20, 258.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1352) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (460, 729, 1688) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4144) [M::mem_pestat] mean and std.dev: (796.17, 580.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5372) [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 771340 reads in 201.609 CPU sec, 6.393 real sec sorting block 21, #reads = 1115486 mem = 536885742 peak = 919900160 [M::mem_process_seqs] Processed 769346 reads in 144.039 CPU sec, 4.578 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (10, 304121, 7, 26) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (152, 398, 739) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1913) [M::mem_pestat] mean and std.dev: (424.67, 422.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2500) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (111, 149, 203) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 387) [M::mem_pestat] mean and std.dev: (162.05, 67.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 479) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (212, 528, 2009) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5603) [M::mem_pestat] mean and std.dev: (1233.92, 1270.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7400) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 766312 sequences (100000124 bp) in 3.718 CPU sec, 3.889 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (13, 303640, 2, 19) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (147, 173, 868) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2310) [M::mem_pestat] mean and std.dev: (344.50, 462.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3031) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (111, 149, 204) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 390) [M::mem_pestat] mean and std.dev: (162.82, 68.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 483) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (390, 888, 5481) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 15663) [M::mem_pestat] mean and std.dev: (2311.21, 2300.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 20754) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 765992 sequences (100000126 bp) in 2.199 CPU sec, 2.205 real sec... [M::mem_process_seqs] Processed 767764 reads in 203.242 CPU sec, 6.425 real sec sorting block 22, #reads = 1113848 mem = 536875656 peak = 919900160 [M::mem_process_seqs] Processed 766816 reads in 148.196 CPU sec, 4.696 real sec sorting block 23, #reads = 1113079 mem = 536880645 peak = 972398592 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (24, 303789, 9, 9) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (144, 204, 2283) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6561) [M::mem_pestat] mean and std.dev: (887.18, 1366.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8700) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (112, 149, 205) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 391) [M::mem_pestat] mean and std.dev: (163.16, 68.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 484) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] skip orientation RR as there are not enough pairs [M::mem_pestat] skip orientation FF [M::process] read 764664 sequences (100000263 bp) in 3.560 CPU sec, 3.706 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (23, 303665, 5, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (207, 572, 1517) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4137) [M::mem_pestat] mean and std.dev: (1036.43, 1120.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5520) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (112, 150, 204) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 388) [M::mem_pestat] mean and std.dev: (162.92, 68.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 480) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (236, 522, 1193) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3107) [M::mem_pestat] mean and std.dev: (679.56, 509.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4064) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 764094 sequences (100000126 bp) in 2.023 CPU sec, 2.017 real sec... [M::mem_process_seqs] Processed 766312 reads in 205.671 CPU sec, 6.512 real sec [M::mem_process_seqs] Processed 765992 reads in 148.028 CPU sec, 4.697 real sec sorting block 24, #reads = 1110947 mem = 536877366 peak = 972398592 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (12, 302112, 10, 20) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (154, 252, 2970) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 8602) [M::mem_pestat] mean and std.dev: (1208.75, 1588.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 11418) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (112, 150, 204) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 388) [M::mem_pestat] mean and std.dev: (163.07, 67.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 480) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (377, 810, 1463) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3635) [M::mem_pestat] mean and std.dev: (686.11, 494.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4721) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (160, 578, 1662) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4666) [M::mem_pestat] mean and std.dev: (835.55, 828.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6168) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 764426 sequences (100000141 bp) in 3.317 CPU sec, 3.523 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (20, 302513, 7, 20) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (148, 256, 810) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2134) [M::mem_pestat] mean and std.dev: (571.65, 562.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2820) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (112, 150, 205) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 391) [M::mem_pestat] mean and std.dev: (163.52, 68.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 484) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (147, 246, 1809) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5133) [M::mem_pestat] mean and std.dev: (907.35, 1154.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6795) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 763402 sequences (100000131 bp) in 2.113 CPU sec, 2.122 real sec... [M::mem_process_seqs] Processed 764664 reads in 201.975 CPU sec, 6.399 real sec sorting block 25, #reads = 1111142 mem = 536878820 peak = 972398592 [M::mem_process_seqs] Processed 764094 reads in 147.696 CPU sec, 4.694 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 302520, 6, 10) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (139, 249, 898) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2416) [M::mem_pestat] mean and std.dev: (417.47, 395.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3175) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (112, 150, 205) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 391) [M::mem_pestat] mean and std.dev: (163.58, 68.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 484) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (160, 222, 281) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 523) [M::mem_pestat] mean and std.dev: (198.25, 51.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 644) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 26, #reads = 1108892 mem = 536883847 peak = 972398592 [M::process] read 764214 sequences (100000133 bp) in 3.372 CPU sec, 3.511 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (10, 302319, 14, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (121, 218, 242) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 484) [M::mem_pestat] mean and std.dev: (194.44, 72.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 605) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (113, 151, 206) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 392) [M::mem_pestat] mean and std.dev: (164.09, 68.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 485) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (240, 522, 573) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1239) [M::mem_pestat] mean and std.dev: (423.08, 200.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1572) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (148, 240, 1206) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3322) [M::mem_pestat] mean and std.dev: (668.71, 698.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4380) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 764426 reads in 201.409 CPU sec, 6.361 real sec [M::process] read 764176 sequences (100000062 bp) in 2.760 CPU sec, 2.761 real sec... [M::mem_process_seqs] Processed 763402 reads in 146.523 CPU sec, 4.630 real sec sorting block 27, #reads = 1108487 mem = 536882795 peak = 972398592 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 302858, 11, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (217, 649, 1073) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2785) [M::mem_pestat] mean and std.dev: (759.44, 691.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3641) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (112, 150, 205) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 391) [M::mem_pestat] mean and std.dev: (163.37, 68.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 484) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (192, 243, 906) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2334) [M::mem_pestat] mean and std.dev: (325.33, 284.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3048) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (173, 199, 559) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1331) [M::mem_pestat] mean and std.dev: (308.27, 267.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1717) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 765008 sequences (100000075 bp) in 3.657 CPU sec, 3.802 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 302782, 14, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (289, 662, 1320) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3382) [M::mem_pestat] mean and std.dev: (769.93, 668.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4413) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (112, 151, 205) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 391) [M::mem_pestat] mean and std.dev: (163.58, 68.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 484) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (24, 488, 861) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2535) [M::mem_pestat] mean and std.dev: (347.25, 349.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3372) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (145, 235, 393) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 889) [M::mem_pestat] mean and std.dev: (195.07, 79.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1137) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 771780 sequences (100000284 bp) in 2.300 CPU sec, 2.297 real sec... [M::mem_process_seqs] Processed 764214 reads in 202.887 CPU sec, 6.406 real sec [M::mem_process_seqs] Processed 764176 reads in 234.343 CPU sec, 7.436 real sec sorting block 28, #reads = 1109469 mem = 536881239 peak = 972398592 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (14, 303116, 12, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (188, 431, 1033) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2723) [M::mem_pestat] mean and std.dev: (581.38, 548.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3568) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (112, 150, 204) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 388) [M::mem_pestat] mean and std.dev: (162.77, 67.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 480) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (189, 316, 526) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1200) [M::mem_pestat] mean and std.dev: (389.50, 298.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1585) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (194, 210, 362) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 698) [M::mem_pestat] mean and std.dev: (246.69, 124.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 866) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 771596 sequences (100000001 bp) in 3.092 CPU sec, 3.163 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 305665, 9, 19) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (130, 167, 704) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1852) [M::mem_pestat] mean and std.dev: (362.71, 376.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2426) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (110, 147, 200) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 380) [M::mem_pestat] mean and std.dev: (159.54, 66.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 470) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (188, 413, 458) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 998) [M::mem_pestat] mean and std.dev: (392.84, 206.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1268) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 769740 sequences (100000238 bp) in 2.280 CPU sec, 2.285 real sec... [M::mem_process_seqs] Processed 765008 reads in 206.412 CPU sec, 6.550 real sec sorting block 29, #reads = 1105933 mem = 536879449 peak = 972398592 [M::mem_process_seqs] Processed 771780 reads in 146.377 CPU sec, 4.659 real sec sorting block 30, #reads = 1109281 mem = 536880385 peak = 984436736 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 305133, 8, 19) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (153, 177, 583) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1443) [M::mem_pestat] mean and std.dev: (368.00, 302.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1873) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (110, 147, 200) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 380) [M::mem_pestat] mean and std.dev: (159.68, 66.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 470) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (170, 183, 354) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 722) [M::mem_pestat] mean and std.dev: (250.74, 132.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 906) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 769022 sequences (100000006 bp) in 3.342 CPU sec, 3.486 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (20, 304850, 4, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (155, 245, 419) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 947) [M::mem_pestat] mean and std.dev: (290.60, 207.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1211) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (111, 148, 201) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 381) [M::mem_pestat] mean and std.dev: (160.34, 66.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 471) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (165, 195, 406) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 888) [M::mem_pestat] mean and std.dev: (196.55, 71.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1129) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 768012 sequences (100000102 bp) in 2.219 CPU sec, 2.220 real sec... [M::mem_process_seqs] Processed 771596 reads in 202.079 CPU sec, 6.400 real sec [M::mem_process_seqs] Processed 769740 reads in 144.541 CPU sec, 4.589 real sec sorting block 31, #reads = 1114900 mem = 536882798 peak = 984436736 [M::process] read 767690 sequences (100000161 bp) in 3.518 CPU sec, 3.675 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (13, 303978, 11, 23) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (121, 247, 1125) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3133) [M::mem_pestat] mean and std.dev: (333.55, 293.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4137) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (111, 149, 203) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 387) [M::mem_pestat] mean and std.dev: (161.92, 67.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 479) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (695, 1120, 2602) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6416) [M::mem_pestat] mean and std.dev: (1746.55, 1355.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8323) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (241, 321, 430) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 808) [M::mem_pestat] mean and std.dev: (289.50, 103.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 997) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 766772 sequences (100000050 bp) in 1.880 CPU sec, 1.874 real sec... [M::mem_process_seqs] Processed 768012 reads in 116.160 CPU sec, 3.670 real sec sorting block 32, #reads = 1113904 mem = 536886004 peak = 984436736 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (7, 304368, 5, 14) [M::mem_pestat] skip orientation FF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (111, 148, 202) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 384) [M::mem_pestat] mean and std.dev: (161.13, 67.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 475) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (118, 190, 275) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 589) [M::mem_pestat] mean and std.dev: (158.73, 58.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 746) [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (13, 304037, 12, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (141, 281, 926) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2496) [M::mem_pestat] mean and std.dev: (414.18, 336.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3281) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (111, 149, 203) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 387) [M::mem_pestat] mean and std.dev: (162.08, 68.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 479) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (321, 568, 1416) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3606) [M::mem_pestat] mean and std.dev: (891.75, 1080.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5214) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (213, 282, 765) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1869) [M::mem_pestat] mean and std.dev: (485.38, 450.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2421) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 767402 sequences (100000095 bp) in 1.945 CPU sec, 1.955 real sec... [M::mem_process_seqs] Processed 769022 reads in 316.631 CPU sec, 10.055 real sec [M::mem_process_seqs] Processed 767690 reads in 172.407 CPU sec, 5.514 real sec sorting block 33, #reads = 1114060 mem = 536883148 peak = 984436736 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 303781, 10, 20) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (146, 155, 245) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 443) [M::mem_pestat] mean and std.dev: (164.23, 54.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 542) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (111, 149, 203) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 387) [M::mem_pestat] mean and std.dev: (162.25, 68.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 479) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (338, 338, 509) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 851) [M::mem_pestat] mean and std.dev: (343.38, 75.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1022) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (140, 230, 831) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2213) [M::mem_pestat] mean and std.dev: (552.84, 717.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3425) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 765290 sequences (100000257 bp) in 2.984 CPU sec, 3.095 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (14, 303954, 10, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (162, 180, 418) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 930) [M::mem_pestat] mean and std.dev: (215.58, 142.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1186) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (111, 149, 202) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 384) [M::mem_pestat] mean and std.dev: (161.47, 66.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 475) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (334, 1395, 3000) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 8332) [M::mem_pestat] mean and std.dev: (1851.50, 1995.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 10998) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (128, 287, 665) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1739) [M::mem_pestat] mean and std.dev: (450.50, 395.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2276) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 764232 sequences (100000272 bp) in 2.054 CPU sec, 2.057 real sec... [M::mem_process_seqs] Processed 766772 reads in 197.468 CPU sec, 6.273 real sec sorting block 34, #reads = 1112828 mem = 536879064 peak = 984436736 [M::mem_process_seqs] Processed 767402 reads in 143.013 CPU sec, 4.559 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 303162, 11, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (137, 170, 424) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 998) [M::mem_pestat] mean and std.dev: (239.94, 178.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1285) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (112, 150, 204) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 388) [M::mem_pestat] mean and std.dev: (162.74, 67.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 480) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (312, 765, 3996) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 11364) [M::mem_pestat] mean and std.dev: (1773.64, 2053.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 15048) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (118, 269, 442) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1090) [M::mem_pestat] mean and std.dev: (269.93, 166.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1414) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 35, #reads = 1110090 mem = 536881192 peak = 984436736 [M::process] read 763378 sequences (100000070 bp) in 3.029 CPU sec, 3.249 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (13, 303262, 5, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (136, 179, 353) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 787) [M::mem_pestat] mean and std.dev: (186.45, 78.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1004) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (112, 150, 205) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 391) [M::mem_pestat] mean and std.dev: (163.58, 68.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 484) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (396, 429, 3371) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 9321) [M::mem_pestat] mean and std.dev: (1327.50, 1418.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 12296) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 763130 sequences (100000177 bp) in 1.862 CPU sec, 1.861 real sec... [M::mem_process_seqs] Processed 765290 reads in 199.128 CPU sec, 6.330 real sec [M::mem_process_seqs] Processed 764232 reads in 140.866 CPU sec, 4.483 real sec sorting block 36, #reads = 1110235 mem = 536876548 peak = 984436736 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 302118, 11, 10) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (126, 198, 1237) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3459) [M::mem_pestat] mean and std.dev: (530.47, 611.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4570) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (113, 151, 206) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 392) [M::mem_pestat] mean and std.dev: (164.12, 68.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 485) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (235, 393, 440) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 850) [M::mem_pestat] mean and std.dev: (259.00, 156.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1055) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (214, 675, 1152) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3028) [M::mem_pestat] mean and std.dev: (689.11, 560.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3966) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 764020 sequences (100000008 bp) in 3.262 CPU sec, 3.471 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (12, 302186, 7, 29) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (140, 259, 405) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 935) [M::mem_pestat] mean and std.dev: (276.27, 177.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1200) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (113, 151, 206) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 392) [M::mem_pestat] mean and std.dev: (164.38, 68.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 485) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (177, 270, 828) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2130) [M::mem_pestat] mean and std.dev: (466.41, 408.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2781) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 763922 sequences (100000114 bp) in 1.840 CPU sec, 1.835 real sec... [M::mem_process_seqs] Processed 763378 reads in 199.780 CPU sec, 6.351 real sec [M::mem_process_seqs] Processed 763130 reads in 140.851 CPU sec, 4.483 real sec sorting block 37, #reads = 1109805 mem = 536880094 peak = 984436736 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (25, 302436, 7, 8) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (136, 508, 1566) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4426) [M::mem_pestat] mean and std.dev: (879.40, 885.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5856) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (113, 150, 205) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 389) [M::mem_pestat] mean and std.dev: (163.59, 68.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 481) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] skip orientation RR as there are not enough pairs [M::mem_pestat] skip orientation FF [M::process] read 768760 sequences (100000130 bp) in 2.895 CPU sec, 3.024 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (13, 302206, 10, 19) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (141, 292, 728) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1902) [M::mem_pestat] mean and std.dev: (323.25, 228.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2489) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (113, 151, 205) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 389) [M::mem_pestat] mean and std.dev: (163.63, 68.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 481) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (224, 854, 1069) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2759) [M::mem_pestat] mean and std.dev: (779.90, 681.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3604) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (163, 346, 1312) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3610) [M::mem_pestat] mean and std.dev: (693.78, 788.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4759) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 774266 sequences (100000078 bp) in 1.966 CPU sec, 1.966 real sec... [M::mem_process_seqs] Processed 764020 reads in 201.232 CPU sec, 6.404 real sec sorting block 38, #reads = 1109150 mem = 536879841 peak = 984436736 [M::mem_process_seqs] Processed 763922 reads in 144.006 CPU sec, 4.579 real sec sorting block 39, #reads = 1107454 mem = 536877764 peak = 1013350400 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (24, 304022, 13, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (159, 240, 504) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1194) [M::mem_pestat] mean and std.dev: (326.91, 260.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1539) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (111, 147, 200) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 378) [M::mem_pestat] mean and std.dev: (159.89, 65.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 467) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (377, 415, 2394) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6428) [M::mem_pestat] mean and std.dev: (1022.08, 1103.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8445) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (155, 207, 393) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 869) [M::mem_pestat] mean and std.dev: (263.40, 202.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1107) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 771552 sequences (100000049 bp) in 3.960 CPU sec, 4.067 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (6, 306179, 6, 13) [M::mem_pestat] skip orientation FF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (109, 145, 195) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 367) [M::mem_pestat] mean and std.dev: (156.22, 62.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 453) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (202, 643, 3838) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 11110) [M::mem_pestat] mean and std.dev: (1762.08, 2384.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 14746) [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 768760 reads in 214.783 CPU sec, 6.802 real sec [M::process] read 769572 sequences (100000155 bp) in 2.786 CPU sec, 2.799 real sec... [M::mem_process_seqs] Processed 774266 reads in 154.581 CPU sec, 4.881 real sec sorting block 40, #reads = 1108240 mem = 536887521 peak = 1013350400 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 305443, 9, 11) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (134, 188, 619) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1589) [M::mem_pestat] mean and std.dev: (319.06, 339.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2074) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (110, 146, 197) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 371) [M::mem_pestat] mean and std.dev: (157.93, 64.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 458) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (141, 201, 734) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1920) [M::mem_pestat] mean and std.dev: (505.27, 519.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2585) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 769102 sequences (100000209 bp) in 2.488 CPU sec, 2.594 real sec... [M::process] read 768356 sequences (100000091 bp) in 1.689 CPU sec, 1.693 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (24, 305028, 6, 12) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (165, 501, 833) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2169) [M::mem_pestat] mean and std.dev: (428.59, 321.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2837) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (111, 147, 198) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 372) [M::mem_pestat] mean and std.dev: (158.72, 64.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 459) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (129, 351, 413) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 981) [M::mem_pestat] mean and std.dev: (276.91, 170.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1265) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 771552 reads in 202.089 CPU sec, 6.444 real sec sorting block 41, #reads = 1111945 mem = 536889777 peak = 1013350400 [M::mem_process_seqs] Processed 769572 reads in 141.524 CPU sec, 4.531 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (7, 304807, 10, 14) [M::mem_pestat] skip orientation FF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (111, 147, 200) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 378) [M::mem_pestat] mean and std.dev: (159.66, 65.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 467) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (311, 1576, 2159) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5855) [M::mem_pestat] mean and std.dev: (1331.10, 994.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7703) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (133, 901, 1470) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4144) [M::mem_pestat] mean and std.dev: (947.00, 1076.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5481) [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 42, #reads = 1113971 mem = 536876844 peak = 1013350400 [M::process] read 767136 sequences (100000037 bp) in 2.890 CPU sec, 2.995 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 304364, 12, 17) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (202, 354, 392) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 772) [M::mem_pestat] mean and std.dev: (258.92, 106.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 962) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (111, 148, 201) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 381) [M::mem_pestat] mean and std.dev: (160.79, 66.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 471) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (153, 289, 785) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2049) [M::mem_pestat] mean and std.dev: (413.17, 374.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2681) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (122, 181, 442) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1082) [M::mem_pestat] mean and std.dev: (236.27, 131.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1402) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 766294 sequences (100000228 bp) in 2.149 CPU sec, 2.148 real sec... [M::mem_process_seqs] Processed 769102 reads in 196.636 CPU sec, 6.247 real sec [M::mem_process_seqs] Processed 768356 reads in 139.391 CPU sec, 4.434 real sec sorting block 43, #reads = 1111172 mem = 536884894 peak = 1013350400 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 303315, 6, 23) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (254, 735, 3990) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 11462) [M::mem_pestat] mean and std.dev: (1952.44, 2741.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 15198) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (111, 148, 201) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 381) [M::mem_pestat] mean and std.dev: (160.86, 66.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 471) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (144, 172, 1224) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3384) [M::mem_pestat] mean and std.dev: (614.73, 831.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4464) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 765786 sequences (100000146 bp) in 3.023 CPU sec, 3.114 real sec... [M::process] read 764820 sequences (100000098 bp) in 1.760 CPU sec, 1.769 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 303337, 14, 13) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (314, 396, 1452) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3728) [M::mem_pestat] mean and std.dev: (670.38, 897.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4866) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (112, 149, 203) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 385) [M::mem_pestat] mean and std.dev: (162.01, 67.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 476) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (191, 444, 1232) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3314) [M::mem_pestat] mean and std.dev: (729.86, 684.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4355) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (211, 275, 1241) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3301) [M::mem_pestat] mean and std.dev: (816.54, 906.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4442) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 767136 reads in 202.799 CPU sec, 6.452 real sec [M::mem_process_seqs] Processed 766294 reads in 142.614 CPU sec, 4.551 real sec sorting block 44, #reads = 1109423 mem = 536878149 peak = 1013350400 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 302662, 9, 12) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (181, 244, 1019) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2695) [M::mem_pestat] mean and std.dev: (469.54, 469.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3533) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (112, 150, 203) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 385) [M::mem_pestat] mean and std.dev: (162.16, 67.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 476) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (192, 260, 1081) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2859) [M::mem_pestat] mean and std.dev: (584.08, 573.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3748) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 764396 sequences (100000093 bp) in 2.846 CPU sec, 2.939 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (19, 302551, 7, 11) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (205, 258, 2035) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5695) [M::mem_pestat] mean and std.dev: (1046.78, 1309.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7525) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (112, 150, 203) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 385) [M::mem_pestat] mean and std.dev: (162.38, 67.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 476) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (208, 381, 649) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1531) [M::mem_pestat] mean and std.dev: (491.91, 393.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2066) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 765786 reads in 202.721 CPU sec, 6.431 real sec [M::process] read 764772 sequences (100000151 bp) in 2.710 CPU sec, 2.705 real sec... sorting block 45, #reads = 1108677 mem = 536879156 peak = 1013350400 [M::mem_process_seqs] Processed 764820 reads in 144.036 CPU sec, 4.557 real sec sorting block 46, #reads = 1106805 mem = 536881529 peak = 1039122432 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 302834, 9, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (145, 301, 1791) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5083) [M::mem_pestat] mean and std.dev: (696.25, 832.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6729) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (112, 150, 204) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 388) [M::mem_pestat] mean and std.dev: (162.90, 67.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 480) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (249, 249, 373) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 621) [M::mem_pestat] mean and std.dev: (242.31, 70.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 745) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 763822 sequences (100000134 bp) in 3.173 CPU sec, 3.330 real sec... [M::process] read 764584 sequences (100000030 bp) in 1.868 CPU sec, 1.868 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 302655, 6, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (304, 351, 866) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1990) [M::mem_pestat] mean and std.dev: (520.94, 437.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2552) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (112, 150, 204) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 388) [M::mem_pestat] mean and std.dev: (162.89, 67.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 480) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (198, 524, 2160) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6084) [M::mem_pestat] mean and std.dev: (1508.53, 1991.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9476) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 764396 reads in 204.344 CPU sec, 6.498 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (13, 302427, 6, 20) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (226, 253, 1237) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3259) [M::mem_pestat] mean and std.dev: (427.25, 401.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4270) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (113, 151, 205) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 389) [M::mem_pestat] mean and std.dev: (163.48, 67.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 481) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (252, 398, 1312) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3432) [M::mem_pestat] mean and std.dev: (658.42, 690.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4492) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 765286 sequences (100000136 bp) in 2.401 CPU sec, 2.405 real sec... [M::mem_process_seqs] Processed 763822 reads in 114.751 CPU sec, 3.642 real sec sorting block 47, #reads = 1108024 mem = 536880830 peak = 1039122432 [M::mem_process_seqs] Processed 764772 reads in 290.361 CPU sec, 9.253 real sec sorting block 48, #reads = 1105860 mem = 536876116 peak = 1101766656 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (11, 302844, 10, 11) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (194, 227, 443) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 941) [M::mem_pestat] mean and std.dev: (219.33, 134.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1190) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (112, 150, 204) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 388) [M::mem_pestat] mean and std.dev: (163.04, 67.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 480) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (208, 1165, 1201) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3187) [M::mem_pestat] mean and std.dev: (708.40, 559.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4180) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (161, 204, 648) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1622) [M::mem_pestat] mean and std.dev: (374.10, 388.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2109) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 777650 sequences (100000072 bp) in 3.370 CPU sec, 3.528 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (12, 302689, 15, 20) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (191, 670, 1170) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3128) [M::mem_pestat] mean and std.dev: (511.10, 328.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4107) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (112, 150, 203) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 385) [M::mem_pestat] mean and std.dev: (162.06, 66.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 476) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (23, 250, 1590) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4724) [M::mem_pestat] mean and std.dev: (836.60, 1075.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6291) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (155, 276, 1117) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3041) [M::mem_pestat] mean and std.dev: (607.00, 681.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4003) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 764584 reads in 235.704 CPU sec, 7.487 real sec [M::process] read 776504 sequences (100000220 bp) in 2.892 CPU sec, 2.938 real sec... sorting block 49, #reads = 1106929 mem = 536882704 peak = 1101766656 [M::process] read 774704 sequences (100000168 bp) in 1.845 CPU sec, 1.846 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 306634, 7, 24) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (138, 187, 820) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2184) [M::mem_pestat] mean and std.dev: (366.40, 378.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2866) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (108, 143, 191) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 357) [M::mem_pestat] mean and std.dev: (153.80, 60.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 440) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (168, 290, 298) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 558) [M::mem_pestat] mean and std.dev: (230.50, 85.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 688) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 777650 reads in 124.727 CPU sec, 3.982 real sec [M::mem_process_seqs] Processed 765286 reads in 315.472 CPU sec, 10.028 real sec sorting block 50, #reads = 1109523 mem = 536879976 peak = 1101766656 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (11, 306880, 4, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (146, 181, 1179) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3245) [M::mem_pestat] mean and std.dev: (531.20, 607.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4278) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (109, 144, 192) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 358) [M::mem_pestat] mean and std.dev: (154.54, 61.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 441) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (291, 702, 1100) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2718) [M::mem_pestat] mean and std.dev: (648.14, 402.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3527) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 773198 sequences (100000113 bp) in 2.912 CPU sec, 2.978 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 306598, 9, 19) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (207, 436, 770) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1896) [M::mem_pestat] mean and std.dev: (449.25, 351.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2459) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (109, 145, 194) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 364) [M::mem_pestat] mean and std.dev: (155.97, 62.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 449) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (128, 144, 193) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 323) [M::mem_pestat] mean and std.dev: (138.20, 32.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 388) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 771824 sequences (100000263 bp) in 1.930 CPU sec, 1.936 real sec... [M::mem_process_seqs] Processed 776504 reads in 248.749 CPU sec, 7.937 real sec sorting block 51, #reads = 1107040 mem = 536884983 peak = 1101766656 [M::mem_process_seqs] Processed 774704 reads in 155.061 CPU sec, 4.970 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (23, 305672, 7, 11) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (105, 147, 369) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 897) [M::mem_pestat] mean and std.dev: (229.00, 199.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1161) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (110, 145, 195) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 365) [M::mem_pestat] mean and std.dev: (156.61, 62.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 450) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (179, 236, 2042) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5768) [M::mem_pestat] mean and std.dev: (905.82, 905.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7631) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 772026 sequences (100000035 bp) in 2.852 CPU sec, 3.024 real sec... [M::process] read 771282 sequences (100000006 bp) in 1.949 CPU sec, 1.953 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (26, 305279, 11, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (140, 148, 652) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1676) [M::mem_pestat] mean and std.dev: (331.70, 359.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2188) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (110, 146, 197) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 371) [M::mem_pestat] mean and std.dev: (157.80, 64.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 458) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (232, 267, 1150) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2986) [M::mem_pestat] mean and std.dev: (489.50, 564.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3904) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (312, 670, 2484) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6828) [M::mem_pestat] mean and std.dev: (1151.94, 1168.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9000) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 773198 reads in 210.478 CPU sec, 6.701 real sec sorting block 52, #reads = 1110441 mem = 536879545 peak = 1101766656 [M::mem_process_seqs] Processed 771824 reads in 151.897 CPU sec, 4.844 real sec sorting block 53, #reads = 1108028 mem = 536878551 peak = 1101766656 [M::process] read 768374 sequences (100000068 bp) in 2.649 CPU sec, 2.720 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (13, 305469, 8, 17) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (141, 209, 472) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1134) [M::mem_pestat] mean and std.dev: (259.00, 157.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1465) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (110, 146, 198) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 374) [M::mem_pestat] mean and std.dev: (158.24, 64.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 462) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (192, 221, 812) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2052) [M::mem_pestat] mean and std.dev: (463.65, 504.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2672) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 766808 sequences (100000209 bp) in 1.990 CPU sec, 1.988 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (12, 305421, 11, 10) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (207, 211, 814) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2028) [M::mem_pestat] mean and std.dev: (490.17, 450.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2635) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (110, 146, 198) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 374) [M::mem_pestat] mean and std.dev: (158.65, 64.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 462) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (110, 614, 1036) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2888) [M::mem_pestat] mean and std.dev: (435.11, 381.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3814) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (152, 183, 759) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1973) [M::mem_pestat] mean and std.dev: (462.20, 455.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2580) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 304046, 13, 9) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (168, 304, 1420) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3924) [M::mem_pestat] mean and std.dev: (819.87, 917.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5176) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (111, 148, 201) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 381) [M::mem_pestat] mean and std.dev: (160.65, 66.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 471) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (331, 439, 2288) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6202) [M::mem_pestat] mean and std.dev: (833.31, 820.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8159) [M::mem_pestat] skip orientation RR as there are not enough pairs [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_process_seqs] Processed 772026 reads in 289.790 CPU sec, 9.249 real sec [M::mem_process_seqs] Processed 771282 reads in 230.360 CPU sec, 7.397 real sec [M::mem_process_seqs] Processed 768374 reads in 262.215 CPU sec, 8.455 real sec sorting block 54, #reads = 1110052 mem = 536877599 peak = 1101766656 [M::process] read 766178 sequences (100000028 bp) in 3.134 CPU sec, 3.380 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (20, 303167, 7, 8) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (157, 255, 674) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1708) [M::mem_pestat] mean and std.dev: (311.65, 286.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2225) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (112, 149, 202) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 382) [M::mem_pestat] mean and std.dev: (161.26, 66.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 472) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] skip orientation RR as there are not enough pairs [M::mem_pestat] skip orientation FF sorting block 55, #reads = 1109192 mem = 536882294 peak = 1101766656 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (14, 303181, 13, 20) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (114, 189, 768) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2076) [M::mem_pestat] mean and std.dev: (365.64, 315.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2730) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (112, 149, 202) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 382) [M::mem_pestat] mean and std.dev: (161.46, 66.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 472) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (571, 1095, 1421) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3121) [M::mem_pestat] mean and std.dev: (856.64, 534.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3971) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (146, 288, 334) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 710) [M::mem_pestat] mean and std.dev: (211.25, 81.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 898) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 765636 sequences (100000112 bp) in 2.924 CPU sec, 3.145 real sec... [M::mem_process_seqs] Processed 766808 reads in 210.812 CPU sec, 6.757 real sec [M::mem_process_seqs] Processed 766178 reads in 151.063 CPU sec, 4.786 real sec [M::process] read 764876 sequences (100000252 bp) in 2.374 CPU sec, 2.466 real sec... sorting block 56, #reads = 1105444 mem = 536878535 peak = 1101766656 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (22, 303040, 12, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (157, 253, 868) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2290) [M::mem_pestat] mean and std.dev: (495.52, 473.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3001) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (112, 150, 203) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 385) [M::mem_pestat] mean and std.dev: (162.08, 66.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 476) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (127, 193, 544) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1378) [M::mem_pestat] mean and std.dev: (398.75, 392.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1968) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (150, 270, 871) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2313) [M::mem_pestat] mean and std.dev: (473.38, 471.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3034) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 763752 sequences (100000126 bp) in 2.600 CPU sec, 2.732 real sec... [M::process] read 765264 sequences (100000222 bp) in 1.770 CPU sec, 1.771 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (13, 302595, 5, 31) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (158, 189, 593) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1463) [M::mem_pestat] mean and std.dev: (326.08, 337.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1898) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (112, 150, 204) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 388) [M::mem_pestat] mean and std.dev: (162.67, 67.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 480) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (171, 504, 1552) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4314) [M::mem_pestat] mean and std.dev: (810.11, 1031.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5695) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 765636 reads in 212.077 CPU sec, 6.770 real sec sorting block 57, #reads = 1106224 mem = 536879372 peak = 1101766656 [M::mem_process_seqs] Processed 764876 reads in 152.573 CPU sec, 4.879 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (10, 303025, 17, 11) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (164, 259, 1456) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4040) [M::mem_pestat] mean and std.dev: (619.30, 628.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5332) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (113, 151, 205) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 389) [M::mem_pestat] mean and std.dev: (163.23, 67.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 481) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (216, 379, 1494) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4050) [M::mem_pestat] mean and std.dev: (519.14, 490.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5328) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (160, 174, 778) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2014) [M::mem_pestat] mean and std.dev: (458.45, 513.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2632) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 58, #reads = 1106710 mem = 536878940 peak = 1101766656 [M::process] read 776684 sequences (100000011 bp) in 3.420 CPU sec, 3.645 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 302557, 6, 11) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (137, 173, 318) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 680) [M::mem_pestat] mean and std.dev: (218.36, 116.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 861) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (112, 150, 203) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 385) [M::mem_pestat] mean and std.dev: (161.97, 66.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 476) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (157, 254, 1385) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3841) [M::mem_pestat] mean and std.dev: (634.64, 666.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5069) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 773738 sequences (100000098 bp) in 2.430 CPU sec, 2.430 real sec... [M::mem_process_seqs] Processed 763752 reads in 222.207 CPU sec, 7.040 real sec [M::mem_process_seqs] Processed 765264 reads in 168.060 CPU sec, 5.335 real sec sorting block 59, #reads = 1107767 mem = 536882845 peak = 1101766656 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (11, 307271, 19, 9) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (178, 217, 382) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 790) [M::mem_pestat] mean and std.dev: (241.50, 116.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 994) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (109, 143, 192) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 358) [M::mem_pestat] mean and std.dev: (154.43, 61.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 441) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (207, 929, 1452) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3942) [M::mem_pestat] mean and std.dev: (1092.26, 1004.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5187) [M::mem_pestat] skip orientation RR as there are not enough pairs [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::process] read 772166 sequences (100000048 bp) in 2.983 CPU sec, 3.075 real sec... [M::process] read 770650 sequences (100000017 bp) in 2.348 CPU sec, 2.351 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (20, 306099, 6, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (171, 433, 1748) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4902) [M::mem_pestat] mean and std.dev: (934.60, 861.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6479) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (109, 145, 195) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 367) [M::mem_pestat] mean and std.dev: (156.48, 63.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 453) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (144, 184, 816) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2160) [M::mem_pestat] mean and std.dev: (423.13, 422.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2832) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 776684 reads in 220.633 CPU sec, 7.005 real sec sorting block 60, #reads = 1106084 mem = 536879551 peak = 1101766656 [M::mem_process_seqs] Processed 773738 reads in 154.114 CPU sec, 4.907 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (11, 305642, 8, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (138, 138, 768) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2028) [M::mem_pestat] mean and std.dev: (313.90, 280.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2658) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (110, 146, 197) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 371) [M::mem_pestat] mean and std.dev: (157.81, 64.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 458) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (125, 223, 326) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 728) [M::mem_pestat] mean and std.dev: (193.54, 110.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 929) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 770174 sequences (100000115 bp) in 3.150 CPU sec, 3.336 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 305649, 5, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (193, 231, 2711) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7747) [M::mem_pestat] mean and std.dev: (1018.93, 1253.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 10265) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (110, 147, 199) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 377) [M::mem_pestat] mean and std.dev: (159.05, 65.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 466) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (248, 304, 621) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1367) [M::mem_pestat] mean and std.dev: (476.60, 353.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1892) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 770552 sequences (100000238 bp) in 1.950 CPU sec, 1.948 real sec... [M::mem_process_seqs] Processed 772166 reads in 211.756 CPU sec, 6.728 real sec sorting block 61, #reads = 1115789 mem = 536877983 peak = 1101766656 [M::mem_process_seqs] Processed 770650 reads in 153.935 CPU sec, 4.889 real sec sorting block 62, #reads = 1114892 mem = 536879498 peak = 1101766656 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (20, 305442, 8, 11) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (138, 181, 388) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 888) [M::mem_pestat] mean and std.dev: (231.74, 149.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1138) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (110, 147, 199) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 377) [M::mem_pestat] mean and std.dev: (159.29, 65.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 466) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (126, 221, 350) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 798) [M::mem_pestat] mean and std.dev: (241.00, 159.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1022) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 769616 sequences (100000054 bp) in 3.602 CPU sec, 3.801 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 304957, 10, 26) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (153, 300, 601) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1497) [M::mem_pestat] mean and std.dev: (365.35, 281.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1945) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (110, 147, 199) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 377) [M::mem_pestat] mean and std.dev: (159.07, 65.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 466) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (157, 399, 1018) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2740) [M::mem_pestat] mean and std.dev: (690.70, 697.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3601) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (167, 375, 1450) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4016) [M::mem_pestat] mean and std.dev: (713.79, 720.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5299) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 769464 sequences (100000138 bp) in 2.370 CPU sec, 2.370 real sec... [M::mem_process_seqs] Processed 770174 reads in 217.920 CPU sec, 6.891 real sec [M::mem_process_seqs] Processed 770552 reads in 150.728 CPU sec, 4.777 real sec sorting block 63, #reads = 1112350 mem = 536880207 peak = 1101766656 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (8, 304512, 8, 10) [M::mem_pestat] skip orientation FF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (111, 147, 200) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 378) [M::mem_pestat] mean and std.dev: (159.87, 65.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 467) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (199, 376, 590) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1372) [M::mem_pestat] mean and std.dev: (382.10, 195.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1763) [M::mem_pestat] skip orientation RR [M::process] read 768848 sequences (100000267 bp) in 3.298 CPU sec, 3.435 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (19, 305384, 9, 12) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (176, 203, 326) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 626) [M::mem_pestat] mean and std.dev: (210.20, 82.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 776) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (111, 148, 200) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 378) [M::mem_pestat] mean and std.dev: (160.01, 65.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 467) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (145, 286, 1056) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2878) [M::mem_pestat] mean and std.dev: (598.08, 523.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3789) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 769616 reads in 203.931 CPU sec, 6.457 real sec [M::process] read 767336 sequences (100000150 bp) in 2.652 CPU sec, 2.659 real sec... sorting block 64, #reads = 1112445 mem = 536882969 peak = 1101766656 [M::mem_process_seqs] Processed 769464 reads in 148.749 CPU sec, 4.695 real sec sorting block 65, #reads = 1112639 mem = 536884729 peak = 1101766656 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (8, 304376, 9, 19) [M::mem_pestat] skip orientation FF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (111, 148, 201) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 381) [M::mem_pestat] mean and std.dev: (160.36, 66.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 471) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (173, 307, 1151) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3107) [M::mem_pestat] mean and std.dev: (595.72, 770.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4085) [M::mem_pestat] skip orientation RR [M::process] read 765954 sequences (100000077 bp) in 3.468 CPU sec, 3.642 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 303380, 2, 17) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (130, 183, 520) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1300) [M::mem_pestat] mean and std.dev: (254.40, 206.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1690) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (111, 149, 202) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 384) [M::mem_pestat] mean and std.dev: (161.54, 66.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 475) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (136, 236, 847) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2269) [M::mem_pestat] mean and std.dev: (413.06, 367.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2980) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 766124 sequences (100000197 bp) in 2.330 CPU sec, 2.331 real sec... [M::mem_process_seqs] Processed 768848 reads in 217.610 CPU sec, 6.890 real sec [M::mem_process_seqs] Processed 767336 reads in 158.555 CPU sec, 5.029 real sec sorting block 66, #reads = 1110329 mem = 536881563 peak = 1101766656 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 303481, 5, 22) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (139, 275, 1744) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4954) [M::mem_pestat] mean and std.dev: (762.57, 1023.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6559) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (112, 149, 203) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 385) [M::mem_pestat] mean and std.dev: (162.02, 67.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 476) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (189, 325, 541) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1245) [M::mem_pestat] mean and std.dev: (315.84, 218.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1597) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 765888 sequences (100000263 bp) in 2.939 CPU sec, 3.034 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (12, 303144, 11, 24) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (126, 257, 791) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2121) [M::mem_pestat] mean and std.dev: (338.27, 273.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2786) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (112, 149, 202) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 382) [M::mem_pestat] mean and std.dev: (161.70, 66.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 472) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (145, 519, 645) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1645) [M::mem_pestat] mean and std.dev: (446.64, 307.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2145) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (254, 908, 1735) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4697) [M::mem_pestat] mean and std.dev: (907.04, 767.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6178) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 765448 sequences (100000237 bp) in 2.420 CPU sec, 2.418 real sec... [M::mem_process_seqs] Processed 765954 reads in 215.164 CPU sec, 6.823 real sec sorting block 67, #reads = 1107544 mem = 536876117 peak = 1101766656 [M::mem_process_seqs] Processed 766124 reads in 152.732 CPU sec, 4.852 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (20, 303116, 5, 20) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (143, 226, 1121) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3077) [M::mem_pestat] mean and std.dev: (540.72, 639.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4055) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (112, 149, 202) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 382) [M::mem_pestat] mean and std.dev: (161.71, 66.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 472) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (182, 396, 689) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1703) [M::mem_pestat] mean and std.dev: (306.56, 188.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2210) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 772428 sequences (100000169 bp) in 3.705 CPU sec, 3.848 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (10, 302973, 12, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (148, 407, 606) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1522) [M::mem_pestat] mean and std.dev: (330.00, 197.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1980) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (112, 150, 203) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 385) [M::mem_pestat] mean and std.dev: (162.26, 67.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 476) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (480, 600, 1222) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2706) [M::mem_pestat] mean and std.dev: (739.00, 531.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3448) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (178, 222, 481) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1087) [M::mem_pestat] mean and std.dev: (249.53, 153.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1390) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 778842 sequences (100000091 bp) in 2.120 CPU sec, 2.124 real sec... [M::mem_process_seqs] Processed 765888 reads in 221.400 CPU sec, 7.017 real sec sorting block 68, #reads = 1107389 mem = 536883103 peak = 1101766656 [M::mem_process_seqs] Processed 765448 reads in 159.668 CPU sec, 5.073 real sec sorting block 69, #reads = 1103109 mem = 536878847 peak = 1102913536 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (11, 304404, 14, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (203, 239, 686) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1652) [M::mem_pestat] mean and std.dev: (306.67, 214.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2135) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (110, 145, 196) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 368) [M::mem_pestat] mean and std.dev: (157.00, 63.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 454) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (165, 489, 751) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1923) [M::mem_pestat] mean and std.dev: (340.18, 244.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2509) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (118, 182, 728) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1948) [M::mem_pestat] mean and std.dev: (323.33, 296.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2558) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 776878 sequences (100000018 bp) in 3.702 CPU sec, 3.873 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (12, 307149, 7, 13) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (126, 201, 634) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1650) [M::mem_pestat] mean and std.dev: (347.55, 341.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2158) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (108, 142, 190) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 354) [M::mem_pestat] mean and std.dev: (153.13, 60.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 436) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (106, 195, 553) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1447) [M::mem_pestat] mean and std.dev: (217.45, 143.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1894) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 775068 sequences (100000047 bp) in 2.600 CPU sec, 2.606 real sec... [M::mem_process_seqs] Processed 772428 reads in 243.816 CPU sec, 7.729 real sec [M::mem_process_seqs] Processed 778842 reads in 171.889 CPU sec, 5.450 real sec sorting block 70, #reads = 1099543 mem = 536879942 peak = 1102913536 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (11, 306827, 13, 23) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (140, 174, 395) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 905) [M::mem_pestat] mean and std.dev: (245.40, 228.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1160) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (109, 143, 192) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 358) [M::mem_pestat] mean and std.dev: (154.41, 61.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 441) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (167, 529, 986) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2624) [M::mem_pestat] mean and std.dev: (649.15, 550.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3443) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (320, 850, 1603) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4169) [M::mem_pestat] mean and std.dev: (975.57, 708.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5452) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 773196 sequences (100000083 bp) in 3.429 CPU sec, 3.581 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (10, 305744, 9, 13) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (143, 493, 1775) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5039) [M::mem_pestat] mean and std.dev: (635.00, 617.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6671) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (109, 144, 194) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 364) [M::mem_pestat] mean and std.dev: (155.75, 62.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 449) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (255, 315, 1385) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3645) [M::mem_pestat] mean and std.dev: (845.92, 929.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4775) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 772564 sequences (100000074 bp) in 2.570 CPU sec, 2.566 real sec... [M::mem_process_seqs] Processed 776878 reads in 227.156 CPU sec, 7.192 real sec sorting block 71, #reads = 1110371 mem = 536887759 peak = 1102913536 [M::mem_process_seqs] Processed 775068 reads in 162.279 CPU sec, 5.150 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 306170, 11, 25) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (134, 380, 1299) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3629) [M::mem_pestat] mean and std.dev: (614.57, 502.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4794) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (110, 145, 196) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 368) [M::mem_pestat] mean and std.dev: (157.19, 63.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 454) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (177, 771, 1218) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3300) [M::mem_pestat] mean and std.dev: (723.50, 675.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4341) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (133, 634, 3589) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 10501) [M::mem_pestat] mean and std.dev: (1955.44, 2469.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 13957) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 72, #reads = 1108415 mem = 536879388 peak = 1102913536 [M::process] read 772206 sequences (100000113 bp) in 3.094 CPU sec, 3.180 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (19, 305324, 11, 22) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (138, 277, 707) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1845) [M::mem_pestat] mean and std.dev: (358.35, 324.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2414) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (110, 146, 197) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 371) [M::mem_pestat] mean and std.dev: (157.54, 64.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 458) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (353, 472, 1176) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2822) [M::mem_pestat] mean and std.dev: (776.36, 711.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3645) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (159, 348, 542) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1308) [M::mem_pestat] mean and std.dev: (453.86, 390.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2016) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 772046 sequences (100000184 bp) in 2.250 CPU sec, 2.248 real sec... [M::mem_process_seqs] Processed 773196 reads in 223.388 CPU sec, 7.098 real sec [M::mem_process_seqs] Processed 772564 reads in 166.483 CPU sec, 5.290 real sec sorting block 73, #reads = 1109821 mem = 536880061 peak = 1102913536 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 305169, 4, 21) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (149, 217, 1077) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2933) [M::mem_pestat] mean and std.dev: (405.27, 375.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3861) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (110, 146, 197) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 371) [M::mem_pestat] mean and std.dev: (157.72, 64.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 458) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (179, 198, 1176) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3170) [M::mem_pestat] mean and std.dev: (437.75, 491.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4167) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 767988 sequences (100000089 bp) in 3.817 CPU sec, 3.968 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 305125, 9, 22) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (129, 168, 753) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2001) [M::mem_pestat] mean and std.dev: (312.62, 295.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2625) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (110, 146, 197) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 371) [M::mem_pestat] mean and std.dev: (157.85, 64.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 458) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (197, 316, 710) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1736) [M::mem_pestat] mean and std.dev: (393.05, 322.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2249) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 765936 sequences (100000013 bp) in 2.830 CPU sec, 2.828 real sec... [M::mem_process_seqs] Processed 772206 reads in 218.896 CPU sec, 6.901 real sec sorting block 74, #reads = 1107976 mem = 536878396 peak = 1102913536 [M::mem_process_seqs] Processed 772046 reads in 253.670 CPU sec, 8.035 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (10, 303683, 7, 17) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (213, 363, 1175) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3099) [M::mem_pestat] mean and std.dev: (568.67, 483.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4061) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (111, 148, 201) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 381) [M::mem_pestat] mean and std.dev: (160.87, 66.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 471) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (147, 293, 1202) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3312) [M::mem_pestat] mean and std.dev: (605.94, 594.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4367) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 765620 sequences (100000103 bp) in 3.101 CPU sec, 3.191 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (13, 303193, 9, 13) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (202, 968, 3606) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 10414) [M::mem_pestat] mean and std.dev: (1772.00, 2124.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 13818) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (112, 150, 203) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 385) [M::mem_pestat] mean and std.dev: (162.06, 67.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 476) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (168, 193, 223) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (58, 333) [M::mem_pestat] mean and std.dev: (191.25, 51.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 399) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 764090 sequences (100000274 bp) in 2.830 CPU sec, 2.831 real sec... [M::mem_process_seqs] Processed 767988 reads in 226.103 CPU sec, 7.163 real sec sorting block 75, #reads = 1109380 mem = 536876513 peak = 1102913536 [M::mem_process_seqs] Processed 765936 reads in 162.086 CPU sec, 5.140 real sec sorting block 76, #reads = 1106606 mem = 536880019 peak = 1102913536 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 303083, 15, 21) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (105, 215, 1160) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3270) [M::mem_pestat] mean and std.dev: (565.56, 570.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4325) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (112, 150, 204) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 388) [M::mem_pestat] mean and std.dev: (162.68, 67.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 480) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (453, 480, 703) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1203) [M::mem_pestat] mean and std.dev: (427.17, 216.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1453) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (135, 209, 395) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 915) [M::mem_pestat] mean and std.dev: (234.61, 125.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1175) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 764270 sequences (100000167 bp) in 3.809 CPU sec, 3.900 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (19, 302978, 7, 21) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (128, 195, 804) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2156) [M::mem_pestat] mean and std.dev: (343.82, 290.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2832) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (112, 151, 205) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 391) [M::mem_pestat] mean and std.dev: (163.63, 68.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 484) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (149, 188, 292) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 578) [M::mem_pestat] mean and std.dev: (185.39, 76.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 721) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 763314 sequences (100000098 bp) in 2.790 CPU sec, 2.793 real sec... [M::mem_process_seqs] Processed 765620 reads in 217.573 CPU sec, 6.865 real sec [M::mem_process_seqs] Processed 764090 reads in 156.634 CPU sec, 4.953 real sec sorting block 77, #reads = 1107049 mem = 536882311 peak = 1102913536 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 302943, 9, 17) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (212, 291, 1707) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4697) [M::mem_pestat] mean and std.dev: (527.00, 541.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6192) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (113, 151, 205) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 389) [M::mem_pestat] mean and std.dev: (163.65, 68.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 481) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (523, 815, 3247) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 8695) [M::mem_pestat] mean and std.dev: (2089.06, 2563.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 12343) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 582936 sequences (76287799 bp) in 2.743 CPU sec, 2.819 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 302242, 10, 17) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (190, 246, 1127) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3001) [M::mem_pestat] mean and std.dev: (429.11, 413.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3938) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (113, 151, 206) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 392) [M::mem_pestat] mean and std.dev: (164.25, 68.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 485) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (54, 1286, 6065) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 18087) [M::mem_pestat] mean and std.dev: (2638.60, 2893.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 24098) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (133, 196, 445) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1069) [M::mem_pestat] mean and std.dev: (245.20, 164.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1381) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 764270 reads in 211.970 CPU sec, 6.812 real sec sorting block 78, #reads = 1108512 mem = 536879520 peak = 1102913536 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (10, 230824, 1, 13) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (138, 138, 187) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (40, 285) [M::mem_pestat] mean and std.dev: (153.00, 24.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 334) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (112, 150, 205) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 391) [M::mem_pestat] mean and std.dev: (163.50, 68.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 484) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (240, 425, 2899) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 8217) [M::mem_pestat] mean and std.dev: (1784.15, 2353.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 11198) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 582936 reads in 95.875 CPU sec, 3.143 real sec [M::mem_process_seqs] Processed 763314 reads in 249.606 CPU sec, 9.362 real sec sorting block 79, #reads = 1104272 mem = 536876759 peak = 1102913536 os version: Linux 6.12.88 cpu vendor: GenuineIntel signature: 000c06f2 features: bfebfbff 7ffefbff extended: f3bfb7ef fb417ffe amd bits: 2c100800 00000121 brand: INTEL(R) XEON(R) PLATINUM 8559C threads: 31 algo: bwa-mem license: sentieon:klib=31 reads: 88869332 overall: 71601020928 mem 15346.754 user 307.387 sys 520.385 real [main] Version: 0.7.17-r1188 [main] CMD: /opt/conda/share/sentieon-202308.03-3/libexec/bwa mem -K 100000000 -Y -R @RG\tID:A23MHWWLT4.1029_IWL-T1-TDNA-1_A23MHWWLT4_1.L004\tPU:L004\tSM:1029_IWL-T1-TDNA-1_A23MHWWLT4_1\tLB:1029_IWL-T1-TDNA-1_A23MHWWLT4_1\tDS:s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta\tPL:ILLUMINA -t 31 ./BWAIndex/Homo_sapiens_assembly38.fasta.64 1029_IWL-T1-TDNA-1_A23MHWWLT4_1_R1.fastq.gz 1029_IWL-T1-TDNA-1_A23MHWWLT4_1_R2.fastq.gz [main] Real time: 520.431 sec; CPU: 15654.152 sec sorting block 80, #reads = 749500 mem = 363792090 peak = 1165516800 uniq header count 1 merging 81 blocks sw version: sentieon-genomics-202308.03 os version: Linux 6.12.88 cpu vendor: GenuineIntel signature: 000c06f2 features: bfebfbff 7ffefbff extended: f3bfb7ef fb417ffe amd bits: 2c100800 00000121 brand: INTEL(R) XEON(R) PLATINUM 8559C threads: 31 max 192 algo: util-sort license: sentieon:util=1 output file size: 4950077663 output reads: 89531515 bam_mem_sort: 81 calls 44.140 user 1.029 sys 45.286 real bam_write: 81 calls 26.281 user 1.714 sys 28.055 real execute: 1 calls 27.586 user 1.376 sys 554.924 real merge_files: 1 calls 27.572 user 1.328 sys 34.026 real parse_chunk: 1291 calls 70.275 user 15.894 sys 87.115 real read_chunk: 3517 calls 38.376 user 28.468 sys 465.412 real sort_block: 1 calls 28.374 user 28.077 sys 450.691 real write_chunk: 2224 calls 27.240 user 1.005 sys 33.056 real overall: 3447664640 mem 1346.570 user 58.627 sys 554.948 real ls: cannot access '*.cram': No such file or directory