cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i 659_bgw-T1-TDNA-1_A23MHWWLT4_1.md.bam --algo AlignmentStat 659_bgw-T1-TDNA-1_A23MHWWLT4_1.sentieon.alignment_summary_metrics --algo InsertSizeMetricAlgo 659_bgw-T1-TDNA-1_A23MHWWLT4_1.sentieon.insert_size_metrics --algo QualDistribution 659_bgw-T1-TDNA-1_A23MHWWLT4_1.sentieon.quality_distribution_metrics --algo BaseDistributionByCycle 659_bgw-T1-TDNA-1_A23MHWWLT4_1.sentieon.base_distribution_by_cycle_metrics --algo MeanQualityByCycle 659_bgw-T1-TDNA-1_A23MHWWLT4_1.sentieon.quality_by_cycle_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:175000001, elapsed 8.7s, est remaining 164.7s, peak mem 2772MB, user 211.6s, sys 2.6s, output queue size 44
progress 10% @chr1:226000001, elapsed 18.3s, est remaining 164.5s, peak mem 4742MB, user 502.1s, sys 5.2s, output queue size 96
progress 15% @chr3:4000001, elapsed 30.3s, est remaining 171.5s, peak mem 6169MB, user 840.4s, sys 7.9s, output queue size 188
progress 20% @chr3:174000001, elapsed 40.3s, est remaining 161.4s, peak mem 6566MB, user 1161.0s, sys 9.2s, output queue size 174
progress 25% @chr4:83000001, elapsed 47.8s, est remaining 143.3s, peak mem 6621MB, user 1400.5s, sys 10.2s, output queue size 302
progress 30% @chr5:106000001, elapsed 54.0s, est remaining 126.0s, peak mem 6670MB, user 1598.2s, sys 10.9s, output queue size 464
progress 35% @chr6:81000001, elapsed 64.1s, est remaining 119.0s, peak mem 6914MB, user 1869.0s, sys 11.9s, output queue size 625
progress 40% @chr7:79000001, elapsed 75.6s, est remaining 113.5s, peak mem 7505MB, user 2182.5s, sys 13.1s, output queue size 786
progress 45% @chr8:82000001, elapsed 88.6s, est remaining 108.3s, peak mem 7770MB, user 2511.7s, sys 14.2s, output queue size 948
progress 50% @chr9:91000001, elapsed 99.2s, est remaining 99.2s, peak mem 8161MB, user 2846.1s, sys 15.9s, output queue size 1110
progress 55% @chr10:103000001, elapsed 111.6s, est remaining 91.3s, peak mem 8161MB, user 3286.3s, sys 17.9s, output queue size 527
progress 60% @chr12:1000001, elapsed 123.0s, est remaining 82.0s, peak mem 8161MB, user 3619.7s, sys 19.8s, output queue size 689
progress 65% @chr13:33000001, elapsed 136.8s, est remaining 73.6s, peak mem 8161MB, user 4027.8s, sys 21.1s, output queue size 672
progress 70% @chr14:76000001, elapsed 144.9s, est remaining 62.1s, peak mem 8161MB, user 4257.4s, sys 21.7s, output queue size 833
progress 75% @chr16:41000001, elapsed 159.4s, est remaining 53.1s, peak mem 8161MB, user 4693.9s, sys 22.7s, output queue size 797
progress 80% @chr17:72000001, elapsed 176.5s, est remaining 44.1s, peak mem 8161MB, user 5241.9s, sys 23.9s, output queue size 623
progress 85% @chr20:23000001, elapsed 192.4s, est remaining 34.0s, peak mem 8161MB, user 5682.0s, sys 25.0s, output queue size 785
progress 90% @chrX:32000001, elapsed 201.8s, est remaining 22.4s, peak mem 8232MB, user 6044.8s, sys 26.2s, output queue size 947
progress 95% @chrY:54000001, elapsed 208.1s, est remaining 11.0s, peak mem 8238MB, user 6196.9s, sys 27.2s, output queue size 1109
progress 100% @chr12:11000001, elapsed 231.2s, est remaining 0.0s, peak mem 8238MB, user 6582.4s, sys 28.1s, output queue size 4533
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 192
algo: AlignmentStat InsertSizeMetricAlgo QualDistribution BaseDistributionByCycle MeanQualityByCycle
license: sentieon:Metrics=31
input file size: 62674382657
reads: 1298116536
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1041.738 user 20.076 sys 1058.093 real
done: 1 calls 0.034 user 0.000 sys 0.039 real
exec_no_coor: 1 calls 0.012 user 0.000 sys 0.018 real
execute: 1 calls 0.005 user 0.002 sys 231.639 real
idle: 620 calls 0.151 user 0.001 sys 597.095 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 8638382080 mem 6584.407 user 28.468 sys 232.841 real