Detecting adapter sequence for read1...
>Illumina TruSeq Adapter Read 1
AGATCGGAAGAGCACACGTCTGAACTCCAGTCA
Detecting adapter sequence for read2...
>Illumina TruSeq Adapter Read 2
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT
Read1 before filtering:
total reads: 98267438
total bases: 14838383138
Q20 bases: 14410803108(97.1184%)
Q30 bases: 13626350428(91.8318%)
Q40 bases: 13626350428(91.8318%)
Read2 before filtering:
total reads: 98267438
total bases: 14838383138
Q20 bases: 14098510342(95.0138%)
Q30 bases: 12867830687(86.7199%)
Q40 bases: 12867830687(86.7199%)
Read1 after filtering:
total reads: 96463854
total bases: 14027333655
Q20 bases: 13694823904(97.6296%)
Q30 bases: 13000742491(92.6815%)
Q40 bases: 13000742491(92.6815%)
Read2 after filtering:
total reads: 96463854
total bases: 14028594845
Q20 bases: 13463480711(95.9717%)
Q30 bases: 12389656018(88.3172%)
Q40 bases: 12389656018(88.3172%)
Filtering result:
reads passed filter: 192927708
reads failed due to low quality: 3587024
reads failed due to too many N: 16384
reads failed due to too short: 3760
reads with adapter trimmed: 29905570
bases trimmed due to adapters: 1080508715
Duplication rate: 11.4716%
Insert size peak (evaluated by paired-end reads): 183
JSON report: 1029_I9B-T1-TDNA-1_A23MHWWLT4_1.fastp.json
HTML report: 1029_I9B-T1-TDNA-1_A23MHWWLT4_1.fastp.html
fastp --in1 1029_I9B-T1-TDNA-1_A23MHWWLT4_1_S27_L007_R1_001.fastq.gz --in2 1029_I9B-T1-TDNA-1_A23MHWWLT4_1_S27_L007_R2_001.fastq.gz --out1 1029_I9B-T1-TDNA-1_A23MHWWLT4_1/1029_I9B-T1-TDNA-1_A23MHWWLT4_1_R1.fastq.gz --out2 1029_I9B-T1-TDNA-1_A23MHWWLT4_1/1029_I9B-T1-TDNA-1_A23MHWWLT4_1_R2.fastq.gz --detect_adapter_for_pe --length_required 15 --json 1029_I9B-T1-TDNA-1_A23MHWWLT4_1.fastp.json --html 1029_I9B-T1-TDNA-1_A23MHWWLT4_1.fastp.html --thread 4
fastp v1.0.1, time used: 1111 seconds