cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/util sort -r Homo_sapiens_assembly38.fasta -t 31 -o 1136_27F-T1-TDNA-1_A23MHWWLT4_1.bam --sam2bam - This software is licensed to bgold@natera.com by Sentieon Inc. This software is licensed to bgold@natera.com by Sentieon Inc. No more license available for sentieon:klib version: sentieon-genomics-202308.03 No more license available for sentieon:klib [M::bwa_idx_load_from_disk] read 3171 ALT contigs No more license available for sentieon:klib No more license available for sentieon:klib No more license available for sentieon:klib No more license available for sentieon:klib No more license available for sentieon:klib No more license available for sentieon:klib No more license available for sentieon:klib No more license available for sentieon:klib No more license available for sentieon:klib No more license available for sentieon:klib No more license available for sentieon:klib No more license available for sentieon:klib No more license available for sentieon:klib No more license available for sentieon:klib No more license available for sentieon:klib Received only 12 licenses out of 31 requested for sentieon:klib [M::main_mem] bwa index loaded in 1642.900 CPU sec, 1052.758 real sec [M::process] read 700894 sequences (100000042 bp) in 0.992 CPU sec, 0.992 real sec... [M::process] read 700564 sequences (100000280 bp) in 1.220 CPU sec, 1.221 real sec... [M::process] read 699786 sequences (100000169 bp) in 1.169 CPU sec, 1.169 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (64, 291863, 17, 62) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (210, 341, 816) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2028) [M::mem_pestat] mean and std.dev: (393.70, 309.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2634) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (158, 234, 340) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 704) [M::mem_pestat] mean and std.dev: (258.97, 129.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 886) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (242, 983, 2201) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6119) [M::mem_pestat] mean and std.dev: (1108.35, 904.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8078) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (204, 281, 449) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 939) [M::mem_pestat] mean and std.dev: (327.53, 176.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1184) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 699696 sequences (100000083 bp) in 1.140 CPU sec, 1.140 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (51, 291901, 14, 63) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (140, 206, 392) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 896) [M::mem_pestat] mean and std.dev: (257.00, 157.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1148) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (160, 239, 349) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 727) [M::mem_pestat] mean and std.dev: (264.61, 133.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 916) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (163, 1088, 1732) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4870) [M::mem_pestat] mean and std.dev: (837.08, 653.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6439) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (170, 294, 434) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 962) [M::mem_pestat] mean and std.dev: (294.07, 179.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1226) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (55, 292337, 28, 58) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (171, 315, 462) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1044) [M::mem_pestat] mean and std.dev: (304.22, 184.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1335) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (159, 236, 342) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 708) [M::mem_pestat] mean and std.dev: (260.86, 129.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 891) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (237, 526, 1037) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2637) [M::mem_pestat] mean and std.dev: (679.92, 615.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3437) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (224, 333, 612) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1388) [M::mem_pestat] mean and std.dev: (419.48, 288.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1776) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 700894 reads in 200.503 CPU sec, 6.370 real sec [M::mem_process_seqs] Processed 699786 reads in 133.234 CPU sec, 4.275 real sec [M::mem_process_seqs] Processed 700564 reads in 145.045 CPU sec, 4.669 real sec sorting block 0, #reads = 1090523 mem = 536881891 peak = 616673280 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (58, 291728, 25, 62) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (165, 250, 445) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1005) [M::mem_pestat] mean and std.dev: (283.36, 183.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1285) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (160, 238, 349) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 727) [M::mem_pestat] mean and std.dev: (264.65, 133.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 916) [M::process] read 697104 sequences (100000181 bp) in 2.005 CPU sec, 2.152 real sec... [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (547, 1178, 1890) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4576) [M::mem_pestat] mean and std.dev: (1100.80, 734.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5919) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (210, 351, 527) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1161) [M::mem_pestat] mean and std.dev: (344.66, 193.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1478) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 696254 sequences (100000190 bp) in 1.243 CPU sec, 1.258 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (56, 291129, 32, 84) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (243, 398, 842) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2040) [M::mem_pestat] mean and std.dev: (454.14, 370.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2639) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 248, 361) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 755) [M::mem_pestat] mean and std.dev: (273.32, 137.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 952) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (73, 741, 1430) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4144) [M::mem_pestat] mean and std.dev: (696.90, 638.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5501) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (175, 306, 508) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1174) [M::mem_pestat] mean and std.dev: (379.11, 273.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1507) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 699696 reads in 125.104 CPU sec, 4.037 real sec sorting block 1, #reads = 1090466 mem = 536881081 peak = 847884288 [M::mem_process_seqs] Processed 697104 reads in 78.468 CPU sec, 2.473 real sec [M::process] read 696622 sequences (100000122 bp) in 1.305 CPU sec, 1.337 real sec... sorting block 2, #reads = 1090589 mem = 536882261 peak = 889937920 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (81, 290400, 30, 57) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (190, 350, 669) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1627) [M::mem_pestat] mean and std.dev: (422.11, 293.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2106) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 250, 363) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 757) [M::mem_pestat] mean and std.dev: (275.03, 137.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 954) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (304, 863, 1212) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3028) [M::mem_pestat] mean and std.dev: (829.14, 589.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3936) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (217, 308, 641) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1489) [M::mem_pestat] mean and std.dev: (382.31, 244.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1913) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 695146 sequences (100000008 bp) in 1.834 CPU sec, 1.897 real sec... [M::process] read 694212 sequences (100000219 bp) in 1.200 CPU sec, 1.204 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (55, 290729, 23, 59) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (176, 290, 693) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1727) [M::mem_pestat] mean and std.dev: (331.51, 224.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2244) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 248, 358) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 744) [M::mem_pestat] mean and std.dev: (272.32, 135.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 937) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (334, 856, 2035) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5437) [M::mem_pestat] mean and std.dev: (1258.52, 1315.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7138) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (184, 282, 601) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1435) [M::mem_pestat] mean and std.dev: (369.22, 318.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1852) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 696254 reads in 124.064 CPU sec, 3.939 real sec [M::mem_process_seqs] Processed 696622 reads in 78.508 CPU sec, 2.494 real sec sorting block 3, #reads = 1089002 mem = 536878956 peak = 889937920 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (72, 290638, 30, 65) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (167, 265, 496) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1154) [M::mem_pestat] mean and std.dev: (337.41, 233.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1483) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (169, 254, 366) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 760) [M::mem_pestat] mean and std.dev: (277.89, 138.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 957) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (166, 560, 1021) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2731) [M::mem_pestat] mean and std.dev: (600.63, 630.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3586) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (220, 294, 589) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1327) [M::mem_pestat] mean and std.dev: (368.82, 280.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1696) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 694432 sequences (100000229 bp) in 1.837 CPU sec, 1.943 real sec... [M::process] read 693878 sequences (100000173 bp) in 1.230 CPU sec, 1.230 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (95, 289394, 27, 69) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (169, 347, 584) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1414) [M::mem_pestat] mean and std.dev: (387.00, 268.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1829) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (170, 255, 365) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 755) [M::mem_pestat] mean and std.dev: (278.02, 136.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 950) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (147, 578, 1112) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3042) [M::mem_pestat] mean and std.dev: (495.04, 431.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4007) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (178, 331, 540) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1264) [M::mem_pestat] mean and std.dev: (342.64, 229.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1626) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 695146 reads in 125.667 CPU sec, 4.002 real sec [M::mem_process_seqs] Processed 694212 reads in 79.533 CPU sec, 2.536 real sec sorting block 4, #reads = 1089216 mem = 536881256 peak = 889937920 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (59, 290259, 26, 71) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (181, 305, 659) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1615) [M::mem_pestat] mean and std.dev: (428.79, 326.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2093) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (169, 253, 362) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 748) [M::mem_pestat] mean and std.dev: (275.99, 135.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 941) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (62, 765, 1242) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3602) [M::mem_pestat] mean and std.dev: (875.08, 1012.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4927) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (193, 299, 848) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2158) [M::mem_pestat] mean and std.dev: (468.47, 403.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2813) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 693068 sequences (100000087 bp) in 1.911 CPU sec, 2.014 real sec... [M::process] read 700498 sequences (100000255 bp) in 1.272 CPU sec, 1.282 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (62, 289452, 29, 86) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (179, 337, 782) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1988) [M::mem_pestat] mean and std.dev: (487.84, 437.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2591) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (170, 256, 366) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 758) [M::mem_pestat] mean and std.dev: (278.39, 136.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 954) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (27, 352, 839) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2463) [M::mem_pestat] mean and std.dev: (422.52, 473.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3275) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (206, 334, 533) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1187) [M::mem_pestat] mean and std.dev: (378.73, 259.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1514) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 694432 reads in 124.992 CPU sec, 3.971 real sec sorting block 5, #reads = 1087320 mem = 536880008 peak = 889937920 [M::mem_process_seqs] Processed 693878 reads in 78.501 CPU sec, 2.494 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (71, 289394, 25, 58) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (159, 273, 751) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1935) [M::mem_pestat] mean and std.dev: (355.31, 296.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2527) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 259, 369) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 763) [M::mem_pestat] mean and std.dev: (281.18, 137.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 960) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (200, 561, 901) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2303) [M::mem_pestat] mean and std.dev: (515.96, 347.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3004) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (260, 420, 891) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2153) [M::mem_pestat] mean and std.dev: (528.20, 391.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2784) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 6, #reads = 1086979 mem = 536881567 peak = 889937920 [M::process] read 700454 sequences (100000244 bp) in 2.028 CPU sec, 2.128 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (69, 291949, 29, 63) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (195, 293, 393) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 789) [M::mem_pestat] mean and std.dev: (257.17, 117.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 987) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (159, 237, 345) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 717) [M::mem_pestat] mean and std.dev: (262.12, 131.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 903) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (132, 327, 741) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1959) [M::mem_pestat] mean and std.dev: (390.46, 306.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2568) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (192, 345, 615) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1461) [M::mem_pestat] mean and std.dev: (373.03, 260.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1884) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 699784 sequences (100000191 bp) in 1.310 CPU sec, 1.311 real sec... [M::mem_process_seqs] Processed 693068 reads in 126.845 CPU sec, 4.031 real sec [M::mem_process_seqs] Processed 700498 reads in 81.397 CPU sec, 2.576 real sec sorting block 7, #reads = 1086832 mem = 536879550 peak = 889937920 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (56, 291414, 21, 77) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (176, 307, 633) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1547) [M::mem_pestat] mean and std.dev: (385.81, 284.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2004) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (158, 236, 346) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 722) [M::mem_pestat] mean and std.dev: (262.46, 132.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 910) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (59, 493, 1091) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3155) [M::mem_pestat] mean and std.dev: (660.40, 785.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4187) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (199, 364, 1101) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2905) [M::mem_pestat] mean and std.dev: (571.03, 558.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3807) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 699078 sequences (100000219 bp) in 2.128 CPU sec, 2.246 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (85, 291938, 25, 69) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (206, 319, 466) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 986) [M::mem_pestat] mean and std.dev: (302.96, 146.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1246) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (160, 239, 350) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 730) [M::mem_pestat] mean and std.dev: (265.34, 133.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 920) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (190, 716, 1258) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3394) [M::mem_pestat] mean and std.dev: (694.48, 639.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4462) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (163, 277, 609) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1501) [M::mem_pestat] mean and std.dev: (371.57, 319.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1947) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 697620 sequences (100000188 bp) in 1.340 CPU sec, 1.339 real sec... [M::mem_process_seqs] Processed 700454 reads in 126.425 CPU sec, 4.015 real sec [M::mem_process_seqs] Processed 699784 reads in 79.736 CPU sec, 2.526 real sec sorting block 8, #reads = 1092962 mem = 536878579 peak = 889937920 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (70, 291304, 35, 55) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (223, 358, 598) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1348) [M::mem_pestat] mean and std.dev: (409.54, 250.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1723) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (161, 242, 356) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 746) [M::mem_pestat] mean and std.dev: (269.26, 136.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 941) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (236, 603, 1257) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3299) [M::mem_pestat] mean and std.dev: (820.53, 772.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4320) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (204, 290, 379) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 729) [M::mem_pestat] mean and std.dev: (263.67, 115.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 904) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 696910 sequences (100000205 bp) in 2.175 CPU sec, 2.282 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (49, 291808, 51, 57) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (159, 355, 1442) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4008) [M::mem_pestat] mean and std.dev: (461.95, 472.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5291) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 247, 362) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 758) [M::mem_pestat] mean and std.dev: (273.32, 138.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 956) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (173, 337, 1285) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3509) [M::mem_pestat] mean and std.dev: (548.93, 567.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4621) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (179, 337, 412) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 878) [M::mem_pestat] mean and std.dev: (310.11, 171.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1111) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 695704 sequences (100000169 bp) in 1.360 CPU sec, 1.368 real sec... [M::mem_process_seqs] Processed 699078 reads in 126.159 CPU sec, 4.008 real sec [M::mem_process_seqs] Processed 697620 reads in 79.450 CPU sec, 2.511 real sec sorting block 9, #reads = 1091420 mem = 536877751 peak = 889937920 [M::process] read 694666 sequences (100000199 bp) in 2.230 CPU sec, 2.355 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (62, 290162, 29, 51) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (165, 260, 380) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 810) [M::mem_pestat] mean and std.dev: (278.31, 158.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1025) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 252, 365) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 761) [M::mem_pestat] mean and std.dev: (276.75, 138.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 959) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (880, 1248, 2468) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5644) [M::mem_pestat] mean and std.dev: (1492.56, 1210.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7232) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (246, 324, 571) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1221) [M::mem_pestat] mean and std.dev: (387.75, 237.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1546) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 694258 sequences (100000167 bp) in 1.376 CPU sec, 1.383 real sec... [M::mem_process_seqs] Processed 695704 reads in 71.969 CPU sec, 2.274 real sec sorting block 10, #reads = 1090050 mem = 536887391 peak = 889937920 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (68, 290365, 16, 61) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (179, 250, 388) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 806) [M::mem_pestat] mean and std.dev: (257.17, 153.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1015) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 250, 366) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 768) [M::mem_pestat] mean and std.dev: (276.30, 139.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 969) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (110, 342, 778) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2114) [M::mem_pestat] mean and std.dev: (414.44, 409.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2782) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (201, 460, 837) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2109) [M::mem_pestat] mean and std.dev: (554.28, 470.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2745) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (77, 289802, 16, 72) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (199, 297, 664) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1594) [M::mem_pestat] mean and std.dev: (393.11, 323.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2059) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (170, 255, 368) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 764) [M::mem_pestat] mean and std.dev: (279.10, 138.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 962) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (232, 689, 1829) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5023) [M::mem_pestat] mean and std.dev: (814.73, 787.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6620) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (202, 352, 674) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1618) [M::mem_pestat] mean and std.dev: (396.75, 317.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2090) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 696910 reads in 195.441 CPU sec, 6.210 real sec [M::process] read 694410 sequences (100000183 bp) in 1.680 CPU sec, 1.695 real sec... [M::mem_process_seqs] Processed 694666 reads in 93.204 CPU sec, 2.956 real sec sorting block 11, #reads = 1088143 mem = 536877788 peak = 932093952 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (56, 289523, 22, 62) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (153, 268, 555) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1359) [M::mem_pestat] mean and std.dev: (312.82, 251.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1761) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (170, 256, 368) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 764) [M::mem_pestat] mean and std.dev: (279.30, 137.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 962) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (272, 1652, 2240) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6176) [M::mem_pestat] mean and std.dev: (1264.45, 869.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8144) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (233, 318, 412) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 770) [M::mem_pestat] mean and std.dev: (320.81, 137.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 949) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 694434 sequences (100000221 bp) in 2.285 CPU sec, 2.412 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (84, 289566, 29, 83) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (165, 232, 474) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1092) [M::mem_pestat] mean and std.dev: (283.12, 198.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1401) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (169, 254, 364) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 754) [M::mem_pestat] mean and std.dev: (276.94, 136.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 949) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (384, 722, 1396) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3420) [M::mem_pestat] mean and std.dev: (915.86, 663.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4432) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (179, 241, 670) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1652) [M::mem_pestat] mean and std.dev: (381.68, 343.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2143) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 694258 reads in 127.588 CPU sec, 4.059 real sec [M::process] read 694064 sequences (100000132 bp) in 1.385 CPU sec, 1.386 real sec... sorting block 12, #reads = 1088156 mem = 536878907 peak = 932093952 [M::mem_process_seqs] Processed 694410 reads in 81.848 CPU sec, 2.588 real sec sorting block 13, #reads = 1086211 mem = 536883963 peak = 932093952 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (82, 289594, 20, 75) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (170, 323, 528) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1244) [M::mem_pestat] mean and std.dev: (329.48, 245.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1602) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (169, 254, 364) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 754) [M::mem_pestat] mean and std.dev: (276.95, 136.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 949) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (93, 796, 1838) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5328) [M::mem_pestat] mean and std.dev: (896.00, 799.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7073) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (194, 255, 851) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2165) [M::mem_pestat] mean and std.dev: (405.04, 351.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2822) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 699548 sequences (100000168 bp) in 2.225 CPU sec, 2.323 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (95, 289303, 23, 60) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (171, 322, 590) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1428) [M::mem_pestat] mean and std.dev: (369.09, 298.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1847) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (170, 255, 366) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 758) [M::mem_pestat] mean and std.dev: (278.18, 136.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 954) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (233, 1228, 2421) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6797) [M::mem_pestat] mean and std.dev: (1866.70, 2313.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 11122) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (218, 319, 420) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 824) [M::mem_pestat] mean and std.dev: (289.55, 115.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1026) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 700958 sequences (100000281 bp) in 1.380 CPU sec, 1.379 real sec... [M::mem_process_seqs] Processed 694434 reads in 129.352 CPU sec, 4.113 real sec [M::mem_process_seqs] Processed 694064 reads in 82.137 CPU sec, 2.599 real sec sorting block 14, #reads = 1086283 mem = 536878008 peak = 932093952 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (66, 291689, 33, 54) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (161, 284, 803) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2087) [M::mem_pestat] mean and std.dev: (410.22, 393.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2729) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (160, 239, 349) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 727) [M::mem_pestat] mean and std.dev: (264.95, 133.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 916) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (153, 724, 1688) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4758) [M::mem_pestat] mean and std.dev: (1041.13, 1274.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6293) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (210, 262, 433) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 879) [M::mem_pestat] mean and std.dev: (270.91, 123.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1102) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 699822 sequences (100000175 bp) in 2.263 CPU sec, 2.350 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (62, 292552, 33, 83) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (154, 234, 441) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1015) [M::mem_pestat] mean and std.dev: (275.39, 182.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1302) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (158, 236, 345) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 719) [M::mem_pestat] mean and std.dev: (261.67, 131.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 906) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (521, 831, 1715) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4103) [M::mem_pestat] mean and std.dev: (1228.56, 1134.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5767) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (196, 293, 854) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2170) [M::mem_pestat] mean and std.dev: (524.96, 545.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2828) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 698768 sequences (100000215 bp) in 1.370 CPU sec, 1.376 real sec... [M::mem_process_seqs] Processed 699548 reads in 128.935 CPU sec, 4.094 real sec [M::mem_process_seqs] Processed 700958 reads in 81.782 CPU sec, 2.582 real sec sorting block 15, #reads = 1087418 mem = 536879125 peak = 932093952 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (55, 291621, 19, 71) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (169, 239, 362) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 748) [M::mem_pestat] mean and std.dev: (259.48, 130.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 941) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (160, 239, 349) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 727) [M::mem_pestat] mean and std.dev: (264.53, 132.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 916) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (494, 994, 1817) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4463) [M::mem_pestat] mean and std.dev: (866.41, 561.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5786) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (206, 346, 589) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1355) [M::mem_pestat] mean and std.dev: (368.69, 196.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1738) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 697530 sequences (100000028 bp) in 2.035 CPU sec, 2.160 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (80, 291575, 29, 67) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (198, 260, 806) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2022) [M::mem_pestat] mean and std.dev: (398.73, 349.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2630) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (162, 243, 355) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 741) [M::mem_pestat] mean and std.dev: (268.67, 135.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 934) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (360, 583, 1577) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4011) [M::mem_pestat] mean and std.dev: (759.12, 655.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5228) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (188, 347, 802) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2030) [M::mem_pestat] mean and std.dev: (562.05, 520.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2644) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 699822 reads in 127.005 CPU sec, 4.045 real sec [M::process] read 697044 sequences (100000286 bp) in 1.470 CPU sec, 1.484 real sec... [M::mem_process_seqs] Processed 698768 reads in 80.482 CPU sec, 2.541 real sec sorting block 16, #reads = 1090683 mem = 536878442 peak = 932093952 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (71, 291397, 21, 60) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (191, 263, 542) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1244) [M::mem_pestat] mean and std.dev: (336.59, 234.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1595) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 246, 362) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 758) [M::mem_pestat] mean and std.dev: (273.20, 138.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 956) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (344, 565, 755) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1577) [M::mem_pestat] mean and std.dev: (477.06, 259.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1988) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (193, 259, 682) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1660) [M::mem_pestat] mean and std.dev: (343.29, 227.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2149) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 17, #reads = 1088741 mem = 536877696 peak = 932093952 [M::process] read 696306 sequences (100000202 bp) in 2.301 CPU sec, 2.424 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (71, 291016, 20, 60) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (276, 396, 610) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1278) [M::mem_pestat] mean and std.dev: (388.21, 235.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1612) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 249, 363) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 759) [M::mem_pestat] mean and std.dev: (275.05, 139.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 957) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (289, 972, 2665) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7417) [M::mem_pestat] mean and std.dev: (1585.25, 1673.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9793) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (194, 307, 1233) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3311) [M::mem_pestat] mean and std.dev: (712.14, 762.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4350) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 697530 reads in 123.277 CPU sec, 3.922 real sec [M::mem_process_seqs] Processed 697044 reads in 79.916 CPU sec, 2.518 real sec [M::process] read 696400 sequences (100000161 bp) in 1.589 CPU sec, 1.622 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (60, 290777, 27, 82) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (194, 285, 510) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1142) [M::mem_pestat] mean and std.dev: (305.29, 176.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1458) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 250, 365) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 763) [M::mem_pestat] mean and std.dev: (275.92, 139.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 962) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (404, 729, 1350) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3242) [M::mem_pestat] mean and std.dev: (852.33, 620.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4188) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (157, 245, 484) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1138) [M::mem_pestat] mean and std.dev: (281.67, 186.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1465) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 18, #reads = 1089672 mem = 536878271 peak = 932093952 [M::process] read 696170 sequences (100000004 bp) in 2.535 CPU sec, 2.678 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (66, 290763, 34, 59) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (157, 221, 400) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 886) [M::mem_pestat] mean and std.dev: (244.20, 135.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1129) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 248, 361) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 751) [M::mem_pestat] mean and std.dev: (274.03, 137.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 946) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (163, 465, 1241) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3397) [M::mem_pestat] mean and std.dev: (758.50, 761.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4475) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (185, 257, 615) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1475) [M::mem_pestat] mean and std.dev: (353.76, 295.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1905) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 696306 reads in 125.193 CPU sec, 3.992 real sec [M::mem_process_seqs] Processed 696400 reads in 81.373 CPU sec, 2.573 real sec [M::process] read 695636 sequences (100000207 bp) in 2.263 CPU sec, 2.382 real sec... sorting block 19, #reads = 1088777 mem = 536880693 peak = 932093952 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (68, 290526, 25, 77) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (169, 267, 633) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1561) [M::mem_pestat] mean and std.dev: (351.31, 287.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2025) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 248, 358) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 742) [M::mem_pestat] mean and std.dev: (272.69, 135.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 934) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (251, 617, 1006) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2516) [M::mem_pestat] mean and std.dev: (524.68, 351.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3271) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (197, 279, 662) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1592) [M::mem_pestat] mean and std.dev: (372.65, 292.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2057) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 694750 sequences (100000208 bp) in 2.302 CPU sec, 2.448 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (59, 290727, 25, 73) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (167, 242, 495) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1151) [M::mem_pestat] mean and std.dev: (323.41, 267.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1479) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 251, 361) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 749) [M::mem_pestat] mean and std.dev: (274.50, 136.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 943) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (254, 1184, 1690) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4562) [M::mem_pestat] mean and std.dev: (1094.52, 838.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5998) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (160, 309, 543) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1309) [M::mem_pestat] mean and std.dev: (363.43, 270.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1692) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 696170 reads in 129.990 CPU sec, 4.160 real sec [M::mem_process_seqs] Processed 695636 reads in 83.974 CPU sec, 2.659 real sec sorting block 20, #reads = 1087857 mem = 536881121 peak = 932093952 [M::process] read 694376 sequences (100000039 bp) in 2.351 CPU sec, 2.502 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (65, 289751, 23, 57) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (200, 325, 850) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2150) [M::mem_pestat] mean and std.dev: (455.43, 402.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2800) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (168, 253, 364) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 756) [M::mem_pestat] mean and std.dev: (276.32, 136.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 952) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (203, 725, 1834) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5096) [M::mem_pestat] mean and std.dev: (1165.83, 1183.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6727) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (212, 282, 703) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1685) [M::mem_pestat] mean and std.dev: (408.19, 273.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2176) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 699158 sequences (100000175 bp) in 1.949 CPU sec, 2.051 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (68, 290202, 19, 73) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (187, 332, 582) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1372) [M::mem_pestat] mean and std.dev: (342.25, 217.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1767) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (169, 254, 364) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 754) [M::mem_pestat] mean and std.dev: (277.15, 136.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 949) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (237, 608, 1045) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2661) [M::mem_pestat] mean and std.dev: (620.06, 457.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3469) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (195, 303, 627) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1491) [M::mem_pestat] mean and std.dev: (406.69, 321.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1923) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 694750 reads in 130.438 CPU sec, 4.178 real sec sorting block 21, #reads = 1087718 mem = 536877392 peak = 932093952 [M::mem_process_seqs] Processed 694376 reads in 83.989 CPU sec, 2.662 real sec [M::process] read 700174 sequences (100000062 bp) in 1.874 CPU sec, 1.987 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (62, 291457, 26, 51) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (184, 270, 819) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2089) [M::mem_pestat] mean and std.dev: (411.12, 384.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2724) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (161, 240, 350) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 728) [M::mem_pestat] mean and std.dev: (266.00, 134.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 917) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (161, 945, 1189) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3245) [M::mem_pestat] mean and std.dev: (698.00, 508.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4273) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (173, 241, 609) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1481) [M::mem_pestat] mean and std.dev: (362.15, 284.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1917) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 22, #reads = 1086644 mem = 536881361 peak = 932093952 [M::process] read 699422 sequences (100000144 bp) in 1.920 CPU sec, 2.022 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (86, 291874, 31, 75) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (193, 345, 523) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1183) [M::mem_pestat] mean and std.dev: (343.56, 212.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1513) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (159, 238, 348) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 726) [M::mem_pestat] mean and std.dev: (264.04, 134.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 915) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (120, 268, 851) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2313) [M::mem_pestat] mean and std.dev: (430.07, 437.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3044) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (246, 341, 824) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1980) [M::mem_pestat] mean and std.dev: (474.69, 384.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2558) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 699158 reads in 132.503 CPU sec, 4.224 real sec [M::process] read 698382 sequences (100000150 bp) in 1.439 CPU sec, 1.469 real sec... [M::mem_process_seqs] Processed 700174 reads in 83.382 CPU sec, 2.637 real sec sorting block 23, #reads = 1089415 mem = 536879504 peak = 932093952 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (57, 291819, 29, 75) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (152, 262, 562) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1382) [M::mem_pestat] mean and std.dev: (372.90, 298.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1792) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (160, 241, 352) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 736) [M::mem_pestat] mean and std.dev: (266.83, 134.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 928) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (106, 435, 1075) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3013) [M::mem_pestat] mean and std.dev: (543.24, 516.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3982) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (232, 320, 762) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1822) [M::mem_pestat] mean and std.dev: (477.39, 379.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2352) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 697616 sequences (100000284 bp) in 2.200 CPU sec, 2.299 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (67, 290818, 26, 88) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (134, 275, 841) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2255) [M::mem_pestat] mean and std.dev: (504.14, 469.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2962) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (162, 244, 357) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 747) [M::mem_pestat] mean and std.dev: (270.24, 136.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 942) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (628, 1098, 1892) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4420) [M::mem_pestat] mean and std.dev: (1177.40, 702.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5684) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (196, 277, 704) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1720) [M::mem_pestat] mean and std.dev: (461.22, 432.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2228) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 699422 reads in 128.875 CPU sec, 4.109 real sec [M::process] read 696948 sequences (100000087 bp) in 1.406 CPU sec, 1.419 real sec... sorting block 24, #reads = 1091708 mem = 536877519 peak = 932093952 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (68, 290596, 36, 65) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (159, 265, 405) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 897) [M::mem_pestat] mean and std.dev: (267.98, 164.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1143) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 247, 360) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 752) [M::mem_pestat] mean and std.dev: (273.13, 138.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 948) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (160, 691, 1413) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3919) [M::mem_pestat] mean and std.dev: (849.56, 883.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5172) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (220, 325, 562) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1246) [M::mem_pestat] mean and std.dev: (389.34, 245.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1588) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 696770 sequences (100000076 bp) in 1.716 CPU sec, 1.722 real sec... [M::mem_process_seqs] Processed 697616 reads in 71.182 CPU sec, 2.256 real sec [M::mem_process_seqs] Processed 698382 reads in 174.845 CPU sec, 5.549 real sec sorting block 25, #reads = 1089366 mem = 536879393 peak = 932093952 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (75, 290827, 29, 67) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (261, 347, 617) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1329) [M::mem_pestat] mean and std.dev: (381.27, 229.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1685) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 248, 363) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 761) [M::mem_pestat] mean and std.dev: (274.82, 139.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 960) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (123, 371, 1175) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3279) [M::mem_pestat] mean and std.dev: (586.43, 536.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4331) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (212, 363, 770) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1886) [M::mem_pestat] mean and std.dev: (452.02, 334.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2444) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 697118 sequences (100000102 bp) in 2.201 CPU sec, 2.325 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (72, 290821, 16, 60) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (167, 346, 834) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2168) [M::mem_pestat] mean and std.dev: (497.13, 445.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2835) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 247, 362) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 756) [M::mem_pestat] mean and std.dev: (274.24, 139.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 953) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (142, 351, 1768) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5020) [M::mem_pestat] mean and std.dev: (829.12, 1182.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6646) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (201, 335, 699) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1695) [M::mem_pestat] mean and std.dev: (413.22, 330.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2193) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 696948 reads in 142.043 CPU sec, 4.515 real sec [M::mem_process_seqs] Processed 696770 reads in 83.365 CPU sec, 2.641 real sec [M::process] read 697038 sequences (100000008 bp) in 1.554 CPU sec, 1.589 real sec... sorting block 26, #reads = 1088841 mem = 536877317 peak = 937525248 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (74, 290762, 19, 73) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (202, 300, 785) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1951) [M::mem_pestat] mean and std.dev: (520.55, 426.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2534) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 245, 358) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 746) [M::mem_pestat] mean and std.dev: (271.87, 137.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 940) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (68, 271, 554) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1526) [M::mem_pestat] mean and std.dev: (331.50, 341.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2012) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (222, 311, 644) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1488) [M::mem_pestat] mean and std.dev: (397.90, 302.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1910) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 696698 sequences (100000033 bp) in 2.070 CPU sec, 2.175 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (84, 290784, 23, 71) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (156, 274, 443) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1017) [M::mem_pestat] mean and std.dev: (278.68, 162.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1304) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (163, 245, 356) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 742) [M::mem_pestat] mean and std.dev: (270.55, 136.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 935) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (84, 428, 927) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2613) [M::mem_pestat] mean and std.dev: (533.67, 608.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3456) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (193, 328, 538) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1228) [M::mem_pestat] mean and std.dev: (339.12, 193.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1573) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 695908 sequences (100000237 bp) in 1.350 CPU sec, 1.347 real sec... [M::mem_process_seqs] Processed 697118 reads in 129.811 CPU sec, 4.126 real sec sorting block 27, #reads = 1089040 mem = 536877467 peak = 937525248 [M::mem_process_seqs] Processed 697038 reads in 82.610 CPU sec, 2.618 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (67, 290797, 22, 70) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (170, 247, 522) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1226) [M::mem_pestat] mean and std.dev: (318.66, 237.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1578) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 246, 355) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 735) [M::mem_pestat] mean and std.dev: (270.46, 134.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 925) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (220, 676, 1615) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4405) [M::mem_pestat] mean and std.dev: (641.33, 549.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5800) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (200, 266, 467) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1001) [M::mem_pestat] mean and std.dev: (298.82, 159.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1268) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 28, #reads = 1088818 mem = 536879970 peak = 937525248 [M::process] read 695010 sequences (100000130 bp) in 2.051 CPU sec, 2.156 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (69, 289990, 34, 70) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (163, 307, 611) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1507) [M::mem_pestat] mean and std.dev: (418.97, 338.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1955) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 249, 359) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 745) [M::mem_pestat] mean and std.dev: (273.63, 136.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 938) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (240, 767, 1618) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4374) [M::mem_pestat] mean and std.dev: (925.91, 725.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5752) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (189, 334, 477) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1053) [M::mem_pestat] mean and std.dev: (341.47, 203.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1341) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 700594 sequences (100000244 bp) in 1.450 CPU sec, 1.451 real sec... [M::mem_process_seqs] Processed 696698 reads in 130.234 CPU sec, 4.141 real sec [M::mem_process_seqs] Processed 695908 reads in 83.408 CPU sec, 2.640 real sec sorting block 29, #reads = 1087142 mem = 536884303 peak = 937525248 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (79, 289829, 33, 99) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (149, 219, 760) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1982) [M::mem_pestat] mean and std.dev: (337.77, 351.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2593) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (168, 251, 363) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 753) [M::mem_pestat] mean and std.dev: (275.60, 137.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 948) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (276, 606, 1744) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4680) [M::mem_pestat] mean and std.dev: (839.53, 832.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6148) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (183, 264, 467) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1035) [M::mem_pestat] mean and std.dev: (329.49, 204.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1319) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 704608 sequences (100000285 bp) in 2.342 CPU sec, 2.476 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (67, 291701, 18, 63) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (199, 372, 778) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1936) [M::mem_pestat] mean and std.dev: (446.81, 354.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2515) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (158, 235, 344) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 716) [M::mem_pestat] mean and std.dev: (261.91, 132.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 902) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (441, 1326, 2018) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5172) [M::mem_pestat] mean and std.dev: (1413.06, 1302.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6749) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (184, 263, 466) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1030) [M::mem_pestat] mean and std.dev: (312.00, 211.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1312) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 695010 reads in 133.493 CPU sec, 4.244 real sec [M::process] read 702902 sequences (100000013 bp) in 1.400 CPU sec, 1.405 real sec... [M::mem_process_seqs] Processed 700594 reads in 87.530 CPU sec, 2.771 real sec sorting block 30, #reads = 1086970 mem = 536875492 peak = 937525248 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (57, 294029, 24, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (171, 290, 355) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 723) [M::mem_pestat] mean and std.dev: (274.77, 151.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 907) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 223, 328) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 680) [M::mem_pestat] mean and std.dev: (250.40, 127.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 856) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (198, 713, 1587) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4365) [M::mem_pestat] mean and std.dev: (911.08, 783.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5754) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (184, 272, 588) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1396) [M::mem_pestat] mean and std.dev: (317.66, 208.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1800) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 702408 sequences (100000024 bp) in 2.307 CPU sec, 2.430 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (58, 293413, 22, 79) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (197, 312, 715) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1751) [M::mem_pestat] mean and std.dev: (379.88, 289.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2269) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (154, 228, 336) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 700) [M::mem_pestat] mean and std.dev: (256.08, 131.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 882) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (165, 335, 932) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2466) [M::mem_pestat] mean and std.dev: (365.00, 289.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3233) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (185, 257, 678) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1664) [M::mem_pestat] mean and std.dev: (395.24, 381.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2157) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 700486 sequences (100000178 bp) in 1.410 CPU sec, 1.410 real sec... [M::mem_process_seqs] Processed 704608 reads in 135.349 CPU sec, 4.301 real sec [M::mem_process_seqs] Processed 702902 reads in 84.731 CPU sec, 2.684 real sec sorting block 31, #reads = 1089100 mem = 536879940 peak = 946810880 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (52, 293342, 15, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (139, 220, 630) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1612) [M::mem_pestat] mean and std.dev: (334.67, 298.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2103) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (155, 228, 335) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 695) [M::mem_pestat] mean and std.dev: (255.53, 130.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 875) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (255, 388, 709) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1617) [M::mem_pestat] mean and std.dev: (423.60, 235.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2071) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (146, 393, 789) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2075) [M::mem_pestat] mean and std.dev: (498.10, 504.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2718) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 700012 sequences (100000051 bp) in 2.090 CPU sec, 2.175 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (65, 292831, 28, 71) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (185, 282, 458) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1004) [M::mem_pestat] mean and std.dev: (321.55, 203.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1277) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (158, 235, 347) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 725) [M::mem_pestat] mean and std.dev: (264.00, 135.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 914) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (474, 865, 1437) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3363) [M::mem_pestat] mean and std.dev: (760.14, 488.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4326) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (190, 279, 403) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 829) [M::mem_pestat] mean and std.dev: (284.35, 125.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1042) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 699746 sequences (100000268 bp) in 1.410 CPU sec, 1.410 real sec... [M::mem_process_seqs] Processed 702408 reads in 134.711 CPU sec, 4.287 real sec sorting block 32, #reads = 1091799 mem = 536878513 peak = 980545536 [M::mem_process_seqs] Processed 700486 reads in 84.339 CPU sec, 2.676 real sec sorting block 33, #reads = 1090434 mem = 536878121 peak = 1004511232 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (74, 292424, 30, 69) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (190, 327, 526) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1198) [M::mem_pestat] mean and std.dev: (337.24, 198.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1534) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (159, 237, 352) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 738) [M::mem_pestat] mean and std.dev: (266.50, 137.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 931) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (335, 965, 1325) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3305) [M::mem_pestat] mean and std.dev: (860.07, 692.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4295) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (166, 235, 456) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1036) [M::mem_pestat] mean and std.dev: (318.56, 222.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1326) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 698594 sequences (100000120 bp) in 2.265 CPU sec, 2.344 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (41, 292136, 23, 62) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (179, 261, 490) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1112) [M::mem_pestat] mean and std.dev: (305.63, 184.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1423) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (159, 235, 345) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 717) [M::mem_pestat] mean and std.dev: (263.19, 133.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 903) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (299, 584, 2353) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6461) [M::mem_pestat] mean and std.dev: (1175.36, 1161.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8515) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (191, 310, 676) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1646) [M::mem_pestat] mean and std.dev: (382.88, 273.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2131) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 696816 sequences (100000234 bp) in 1.400 CPU sec, 1.402 real sec... [M::mem_process_seqs] Processed 700012 reads in 137.051 CPU sec, 4.371 real sec [M::mem_process_seqs] Processed 699746 reads in 86.680 CPU sec, 2.759 real sec sorting block 34, #reads = 1088490 mem = 536880687 peak = 1004511232 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (69, 291835, 17, 67) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (234, 299, 588) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1296) [M::mem_pestat] mean and std.dev: (373.52, 272.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1650) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (161, 241, 356) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 746) [M::mem_pestat] mean and std.dev: (269.63, 138.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 941) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (511, 753, 2715) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7123) [M::mem_pestat] mean and std.dev: (1335.56, 1425.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9327) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (188, 294, 648) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1568) [M::mem_pestat] mean and std.dev: (430.30, 392.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2028) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 695544 sequences (100000035 bp) in 2.348 CPU sec, 2.464 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (68, 290872, 28, 71) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (180, 292, 598) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1434) [M::mem_pestat] mean and std.dev: (374.92, 273.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1852) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 248, 361) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 753) [M::mem_pestat] mean and std.dev: (273.80, 137.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 949) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (233, 776, 1321) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3497) [M::mem_pestat] mean and std.dev: (965.21, 848.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4585) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (181, 265, 773) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1957) [M::mem_pestat] mean and std.dev: (402.83, 355.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2549) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 695352 sequences (100000110 bp) in 1.400 CPU sec, 1.393 real sec... [M::mem_process_seqs] Processed 698594 reads in 134.476 CPU sec, 4.273 real sec [M::mem_process_seqs] Processed 696816 reads in 86.487 CPU sec, 2.739 real sec sorting block 35, #reads = 1088279 mem = 536882435 peak = 1004511232 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (79, 290355, 24, 81) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (190, 257, 396) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 808) [M::mem_pestat] mean and std.dev: (287.78, 145.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1014) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 251, 365) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 761) [M::mem_pestat] mean and std.dev: (276.87, 138.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 959) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (144, 1105, 2855) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 8277) [M::mem_pestat] mean and std.dev: (1618.12, 1566.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 10988) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (199, 351, 512) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1138) [M::mem_pestat] mean and std.dev: (355.36, 220.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1451) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 702046 sequences (100000027 bp) in 2.686 CPU sec, 2.871 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (70, 290499, 35, 78) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (152, 253, 516) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1244) [M::mem_pestat] mean and std.dev: (297.40, 188.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1608) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (168, 252, 367) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 765) [M::mem_pestat] mean and std.dev: (278.26, 139.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 964) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (207, 607, 1155) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3051) [M::mem_pestat] mean and std.dev: (670.21, 545.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3999) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (202, 348, 615) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1441) [M::mem_pestat] mean and std.dev: (387.16, 267.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1854) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 695544 reads in 138.660 CPU sec, 4.411 real sec [M::mem_process_seqs] Processed 695352 reads in 89.283 CPU sec, 2.820 real sec sorting block 36, #reads = 1085207 mem = 536879441 peak = 1004511232 [M::process] read 707514 sequences (100000002 bp) in 1.663 CPU sec, 1.693 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (71, 292470, 37, 53) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (178, 276, 532) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1240) [M::mem_pestat] mean and std.dev: (309.15, 223.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1594) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (156, 231, 340) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 708) [M::mem_pestat] mean and std.dev: (258.54, 131.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 892) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (205, 506, 1505) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4105) [M::mem_pestat] mean and std.dev: (835.95, 769.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5405) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (161, 392, 1243) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3407) [M::mem_pestat] mean and std.dev: (714.34, 715.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4489) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 37, #reads = 1083891 mem = 536880366 peak = 1004511232 [M::process] read 704652 sequences (100000132 bp) in 2.303 CPU sec, 2.433 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (44, 294563, 28, 71) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (130, 315, 745) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1975) [M::mem_pestat] mean and std.dev: (443.32, 458.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2590) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (148, 216, 315) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 649) [M::mem_pestat] mean and std.dev: (241.75, 120.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 816) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (211, 512, 1216) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3226) [M::mem_pestat] mean and std.dev: (705.86, 600.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4231) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (231, 320, 578) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1272) [M::mem_pestat] mean and std.dev: (348.58, 199.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1619) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 701922 sequences (100000016 bp) in 1.450 CPU sec, 1.450 real sec... [M::mem_process_seqs] Processed 702046 reads in 147.509 CPU sec, 4.692 real sec [M::mem_process_seqs] Processed 707514 reads in 95.170 CPU sec, 3.018 real sec sorting block 38, #reads = 1085951 mem = 536881728 peak = 1004511232 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (65, 293852, 36, 65) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (183, 315, 719) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1791) [M::mem_pestat] mean and std.dev: (423.03, 364.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2327) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 223, 328) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 680) [M::mem_pestat] mean and std.dev: (250.31, 126.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 856) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (152, 264, 1063) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2885) [M::mem_pestat] mean and std.dev: (657.28, 679.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3796) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (250, 390, 880) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2140) [M::mem_pestat] mean and std.dev: (494.31, 395.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2770) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 701024 sequences (100000068 bp) in 2.564 CPU sec, 2.715 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (58, 292821, 29, 54) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (168, 229, 505) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1179) [M::mem_pestat] mean and std.dev: (364.18, 281.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1516) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (156, 231, 339) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 705) [M::mem_pestat] mean and std.dev: (258.01, 130.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 888) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (311, 592, 1001) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2381) [M::mem_pestat] mean and std.dev: (562.74, 372.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3071) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (186, 378, 557) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1299) [M::mem_pestat] mean and std.dev: (390.15, 246.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1670) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 700518 sequences (100000094 bp) in 1.450 CPU sec, 1.450 real sec... [M::mem_process_seqs] Processed 704652 reads in 144.673 CPU sec, 4.600 real sec [M::mem_process_seqs] Processed 701922 reads in 92.383 CPU sec, 2.927 real sec sorting block 39, #reads = 1087535 mem = 536879485 peak = 1004511232 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (79, 292620, 26, 44) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (197, 329, 481) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1049) [M::mem_pestat] mean and std.dev: (353.33, 210.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1333) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (157, 234, 344) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 718) [M::mem_pestat] mean and std.dev: (261.78, 133.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 905) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (173, 474, 1317) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3605) [M::mem_pestat] mean and std.dev: (550.78, 649.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4749) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (278, 517, 1970) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5354) [M::mem_pestat] mean and std.dev: (1025.95, 1179.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7046) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 699460 sequences (100000099 bp) in 2.373 CPU sec, 2.502 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (72, 292256, 24, 67) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (174, 263, 471) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1065) [M::mem_pestat] mean and std.dev: (323.69, 222.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1362) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (158, 236, 348) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 728) [M::mem_pestat] mean and std.dev: (263.65, 133.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 918) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (565, 770, 1242) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2596) [M::mem_pestat] mean and std.dev: (892.65, 467.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3273) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (242, 297, 386) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 674) [M::mem_pestat] mean and std.dev: (279.22, 91.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 818) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 698402 sequences (100000129 bp) in 1.490 CPU sec, 1.493 real sec... [M::mem_process_seqs] Processed 701024 reads in 144.442 CPU sec, 4.589 real sec sorting block 40, #reads = 1086583 mem = 536876088 peak = 1004511232 [M::mem_process_seqs] Processed 700518 reads in 91.096 CPU sec, 2.887 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (69, 291926, 16, 89) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (157, 302, 460) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1066) [M::mem_pestat] mean and std.dev: (272.33, 180.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1369) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (160, 239, 352) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 736) [M::mem_pestat] mean and std.dev: (266.61, 135.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 928) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (178, 743, 1477) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4075) [M::mem_pestat] mean and std.dev: (740.60, 786.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5374) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (212, 285, 536) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1184) [M::mem_pestat] mean and std.dev: (364.17, 225.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1508) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 41, #reads = 1085436 mem = 536880166 peak = 1004511232 [M::process] read 697018 sequences (100000094 bp) in 2.754 CPU sec, 2.925 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (84, 291818, 20, 73) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (198, 272, 409) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 831) [M::mem_pestat] mean and std.dev: (274.54, 131.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1042) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (161, 241, 354) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 740) [M::mem_pestat] mean and std.dev: (268.73, 136.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 933) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (221, 573, 1191) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3131) [M::mem_pestat] mean and std.dev: (677.60, 613.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4101) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (237, 348, 524) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1098) [M::mem_pestat] mean and std.dev: (336.56, 157.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1385) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 699460 reads in 150.099 CPU sec, 4.775 real sec [M::mem_process_seqs] Processed 698402 reads in 94.396 CPU sec, 2.980 real sec [M::process] read 696360 sequences (100000247 bp) in 1.880 CPU sec, 1.915 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (84, 290939, 27, 80) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (161, 334, 494) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1160) [M::mem_pestat] mean and std.dev: (341.25, 214.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1493) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 248, 364) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 762) [M::mem_pestat] mean and std.dev: (275.71, 140.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 961) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (140, 436, 1239) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3437) [M::mem_pestat] mean and std.dev: (622.58, 569.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4536) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (200, 303, 488) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1064) [M::mem_pestat] mean and std.dev: (345.69, 209.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1352) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 42, #reads = 1085866 mem = 536878037 peak = 1004511232 [M::process] read 697032 sequences (100000220 bp) in 2.960 CPU sec, 3.142 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (77, 291110, 16, 59) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (188, 261, 516) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1172) [M::mem_pestat] mean and std.dev: (280.02, 187.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1500) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 247, 363) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 759) [M::mem_pestat] mean and std.dev: (275.13, 140.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 957) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (222, 475, 1291) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3429) [M::mem_pestat] mean and std.dev: (503.43, 434.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4498) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (232, 328, 682) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1582) [M::mem_pestat] mean and std.dev: (473.16, 362.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2032) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 697018 reads in 149.192 CPU sec, 4.762 real sec [M::mem_process_seqs] Processed 696360 reads in 94.965 CPU sec, 3.009 real sec [M::process] read 705502 sequences (100000094 bp) in 2.146 CPU sec, 2.264 real sec... sorting block 43, #reads = 1085305 mem = 536877829 peak = 1004511232 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (68, 290487, 33, 77) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (161, 253, 681) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1721) [M::mem_pestat] mean and std.dev: (435.94, 403.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2241) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 244, 358) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 746) [M::mem_pestat] mean and std.dev: (271.83, 138.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 940) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (159, 449, 1123) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3051) [M::mem_pestat] mean and std.dev: (513.80, 520.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4015) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (267, 465, 771) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1779) [M::mem_pestat] mean and std.dev: (528.80, 391.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2283) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 702916 sequences (100000036 bp) in 2.562 CPU sec, 2.720 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (56, 294313, 16, 61) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (209, 278, 562) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1268) [M::mem_pestat] mean and std.dev: (344.28, 228.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1621) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (151, 220, 322) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 664) [M::mem_pestat] mean and std.dev: (246.64, 124.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 835) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (316, 376, 1675) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4393) [M::mem_pestat] mean and std.dev: (858.31, 841.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5752) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (218, 469, 799) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1961) [M::mem_pestat] mean and std.dev: (514.63, 417.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2542) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 697032 reads in 158.863 CPU sec, 5.066 real sec [M::mem_process_seqs] Processed 705502 reads in 98.120 CPU sec, 3.102 real sec [M::process] read 701454 sequences (100000024 bp) in 1.747 CPU sec, 1.776 real sec... sorting block 44, #reads = 1084447 mem = 536879303 peak = 1004511232 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (67, 292942, 16, 54) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (148, 243, 395) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 889) [M::mem_pestat] mean and std.dev: (263.58, 142.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1136) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (154, 229, 335) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 697) [M::mem_pestat] mean and std.dev: (255.31, 129.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 878) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (669, 1187, 1650) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3612) [M::mem_pestat] mean and std.dev: (929.73, 604.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4593) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (177, 275, 986) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2604) [M::mem_pestat] mean and std.dev: (616.49, 625.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3413) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 700548 sequences (100000070 bp) in 2.483 CPU sec, 2.652 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (64, 292734, 27, 70) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (172, 306, 819) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2113) [M::mem_pestat] mean and std.dev: (416.45, 483.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2760) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (157, 232, 342) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 712) [M::mem_pestat] mean and std.dev: (259.99, 132.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 897) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (255, 402, 1464) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3882) [M::mem_pestat] mean and std.dev: (732.12, 647.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5091) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (173, 281, 460) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1034) [M::mem_pestat] mean and std.dev: (333.75, 222.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1321) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 702916 reads in 146.473 CPU sec, 4.678 real sec sorting block 45, #reads = 1086024 mem = 536879511 peak = 1004511232 [M::mem_process_seqs] Processed 701454 reads in 91.359 CPU sec, 2.891 real sec [M::process] read 699652 sequences (100000034 bp) in 1.690 CPU sec, 1.727 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (47, 292339, 11, 59) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (186, 255, 606) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1446) [M::mem_pestat] mean and std.dev: (370.75, 279.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1866) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (158, 236, 349) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 731) [M::mem_pestat] mean and std.dev: (264.40, 135.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 922) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (828, 1805, 1886) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4002) [M::mem_pestat] mean and std.dev: (1121.78, 694.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5060) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (205, 230, 430) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 880) [M::mem_pestat] mean and std.dev: (299.78, 152.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1105) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 46, #reads = 1091124 mem = 536877835 peak = 1062010880 [M::process] read 698990 sequences (100000237 bp) in 2.550 CPU sec, 2.715 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (57, 292012, 33, 63) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (161, 227, 327) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 659) [M::mem_pestat] mean and std.dev: (224.79, 112.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 825) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (159, 238, 351) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 735) [M::mem_pestat] mean and std.dev: (266.22, 135.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 927) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (66, 478, 634) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1770) [M::mem_pestat] mean and std.dev: (407.07, 428.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2338) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (180, 261, 625) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1515) [M::mem_pestat] mean and std.dev: (313.25, 227.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1960) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 700548 reads in 147.002 CPU sec, 4.692 real sec [M::process] read 698466 sequences (100000102 bp) in 1.621 CPU sec, 1.638 real sec... [M::mem_process_seqs] Processed 699652 reads in 92.929 CPU sec, 2.943 real sec sorting block 47, #reads = 1089953 mem = 536880502 peak = 1062010880 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (62, 292059, 15, 72) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (175, 278, 483) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1099) [M::mem_pestat] mean and std.dev: (295.70, 189.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1407) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (160, 240, 354) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 742) [M::mem_pestat] mean and std.dev: (268.05, 136.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 936) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (554, 845, 1647) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3833) [M::mem_pestat] mean and std.dev: (942.14, 595.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4926) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (166, 273, 547) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1309) [M::mem_pestat] mean and std.dev: (338.35, 272.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1690) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 697450 sequences (100000291 bp) in 2.541 CPU sec, 2.712 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (63, 291481, 21, 80) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (181, 345, 650) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1588) [M::mem_pestat] mean and std.dev: (400.54, 368.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2057) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (162, 242, 357) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 747) [M::mem_pestat] mean and std.dev: (270.28, 137.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 942) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (309, 458, 893) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2061) [M::mem_pestat] mean and std.dev: (486.42, 295.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2645) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (186, 293, 638) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1542) [M::mem_pestat] mean and std.dev: (450.99, 434.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2189) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 698990 reads in 147.908 CPU sec, 4.711 real sec [M::process] read 697440 sequences (100000190 bp) in 1.529 CPU sec, 1.529 real sec... [M::mem_process_seqs] Processed 698466 reads in 93.570 CPU sec, 2.964 real sec sorting block 48, #reads = 1087454 mem = 536880753 peak = 1062010880 [M::process] read 697320 sequences (100000287 bp) in 2.732 CPU sec, 2.912 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (82, 291305, 23, 69) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (188, 243, 502) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1130) [M::mem_pestat] mean and std.dev: (337.95, 255.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1444) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (163, 244, 357) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 745) [M::mem_pestat] mean and std.dev: (271.20, 137.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 939) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (104, 471, 934) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2594) [M::mem_pestat] mean and std.dev: (534.41, 551.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3424) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (212, 329, 934) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2378) [M::mem_pestat] mean and std.dev: (489.48, 476.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3100) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 697048 sequences (100000084 bp) in 1.530 CPU sec, 1.531 real sec... [M::mem_process_seqs] Processed 697440 reads in 88.064 CPU sec, 2.789 real sec sorting block 49, #reads = 1086758 mem = 536878684 peak = 1062010880 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (60, 291091, 35, 75) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (164, 248, 414) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 914) [M::mem_pestat] mean and std.dev: (247.34, 158.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1164) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (163, 244, 358) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 748) [M::mem_pestat] mean and std.dev: (271.42, 137.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 943) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (143, 674, 1732) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4910) [M::mem_pestat] mean and std.dev: (946.14, 821.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6499) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (179, 286, 660) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1622) [M::mem_pestat] mean and std.dev: (355.23, 290.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2103) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (82, 290822, 29, 80) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (176, 301, 525) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1223) [M::mem_pestat] mean and std.dev: (298.87, 185.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1572) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (163, 243, 356) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 742) [M::mem_pestat] mean and std.dev: (270.55, 136.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 935) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (447, 772, 3179) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 8643) [M::mem_pestat] mean and std.dev: (1607.69, 1828.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 11375) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (185, 312, 495) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1115) [M::mem_pestat] mean and std.dev: (311.23, 194.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1425) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 697450 reads in 234.758 CPU sec, 7.470 real sec [M::process] read 706908 sequences (100000121 bp) in 1.603 CPU sec, 1.608 real sec... [M::mem_process_seqs] Processed 697320 reads in 110.025 CPU sec, 3.508 real sec sorting block 50, #reads = 1085391 mem = 536880695 peak = 1062010880 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (65, 290185, 21, 85) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (186, 277, 560) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1308) [M::mem_pestat] mean and std.dev: (339.75, 247.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1682) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 244, 357) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 743) [M::mem_pestat] mean and std.dev: (271.17, 137.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 936) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (460, 686, 1744) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4312) [M::mem_pestat] mean and std.dev: (1002.55, 779.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5596) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (178, 303, 472) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1060) [M::mem_pestat] mean and std.dev: (296.91, 160.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1354) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 707692 sequences (100000043 bp) in 2.745 CPU sec, 2.906 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (59, 293936, 18, 74) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (211, 288, 554) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1240) [M::mem_pestat] mean and std.dev: (328.77, 209.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1583) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (149, 217, 317) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 653) [M::mem_pestat] mean and std.dev: (243.20, 122.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 821) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (914, 1286, 1773) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3491) [M::mem_pestat] mean and std.dev: (1201.18, 668.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4350) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (157, 244, 498) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1180) [M::mem_pestat] mean and std.dev: (256.25, 199.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1521) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 703922 sequences (100000107 bp) in 1.530 CPU sec, 1.532 real sec... [M::mem_process_seqs] Processed 697048 reads in 163.632 CPU sec, 5.206 real sec sorting block 51, #reads = 1084356 mem = 536880124 peak = 1062010880 [M::mem_process_seqs] Processed 706908 reads in 106.266 CPU sec, 3.376 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (61, 294640, 21, 61) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (177, 296, 754) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1908) [M::mem_pestat] mean and std.dev: (405.59, 324.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2485) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (149, 217, 316) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 650) [M::mem_pestat] mean and std.dev: (242.49, 121.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 817) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (277, 633, 939) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2263) [M::mem_pestat] mean and std.dev: (687.62, 511.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2925) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (186, 250, 435) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 933) [M::mem_pestat] mean and std.dev: (306.47, 192.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1182) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 52, #reads = 1081510 mem = 536878955 peak = 1062010880 [M::process] read 702230 sequences (100000017 bp) in 2.527 CPU sec, 2.690 real sec... [M::process] read 700758 sequences (100000135 bp) in 1.560 CPU sec, 1.559 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (58, 293787, 30, 48) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (181, 314, 421) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 901) [M::mem_pestat] mean and std.dev: (273.08, 136.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1141) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (153, 225, 331) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 687) [M::mem_pestat] mean and std.dev: (251.84, 126.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 865) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (248, 580, 1292) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3380) [M::mem_pestat] mean and std.dev: (728.00, 620.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4424) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (187, 266, 360) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 706) [M::mem_pestat] mean and std.dev: (246.10, 105.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 879) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 707692 reads in 160.672 CPU sec, 5.111 real sec [M::mem_process_seqs] Processed 703922 reads in 98.864 CPU sec, 3.136 real sec sorting block 53, #reads = 1085674 mem = 536878216 peak = 1062010880 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (73, 292667, 17, 58) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (176, 301, 526) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1226) [M::mem_pestat] mean and std.dev: (329.71, 210.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1576) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (156, 232, 341) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 711) [M::mem_pestat] mean and std.dev: (258.97, 131.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 896) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (205, 742, 2455) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6955) [M::mem_pestat] mean and std.dev: (1164.65, 1120.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9205) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (264, 374, 538) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1086) [M::mem_pestat] mean and std.dev: (393.63, 235.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1360) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 699864 sequences (100000268 bp) in 2.487 CPU sec, 2.619 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (70, 292112, 19, 44) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (154, 254, 612) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1528) [M::mem_pestat] mean and std.dev: (364.02, 321.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1986) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (158, 236, 347) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 725) [M::mem_pestat] mean and std.dev: (263.43, 134.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 914) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (432, 541, 1555) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3801) [M::mem_pestat] mean and std.dev: (1010.47, 944.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4924) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (217, 330, 721) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1729) [M::mem_pestat] mean and std.dev: (428.77, 338.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2233) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 699092 sequences (100000176 bp) in 1.510 CPU sec, 1.509 real sec... [M::mem_process_seqs] Processed 702230 reads in 153.674 CPU sec, 4.893 real sec [M::mem_process_seqs] Processed 700758 reads in 96.902 CPU sec, 3.072 real sec sorting block 54, #reads = 1086097 mem = 536877516 peak = 1062010880 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (51, 291744, 29, 70) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (165, 245, 467) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1071) [M::mem_pestat] mean and std.dev: (298.02, 206.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1373) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (159, 236, 348) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 726) [M::mem_pestat] mean and std.dev: (264.63, 135.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 915) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (169, 494, 1952) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5518) [M::mem_pestat] mean and std.dev: (1120.90, 1371.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7301) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (212, 313, 450) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 926) [M::mem_pestat] mean and std.dev: (310.69, 150.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1164) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 698934 sequences (100000156 bp) in 2.504 CPU sec, 2.685 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (47, 291782, 29, 64) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (136, 183, 303) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 637) [M::mem_pestat] mean and std.dev: (198.40, 98.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 804) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (161, 238, 350) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 728) [M::mem_pestat] mean and std.dev: (266.10, 135.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 917) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (251, 754, 1843) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5027) [M::mem_pestat] mean and std.dev: (841.69, 645.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6619) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (289, 406, 1221) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3085) [M::mem_pestat] mean and std.dev: (809.44, 771.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4017) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 698026 sequences (100000152 bp) in 1.470 CPU sec, 1.469 real sec... [M::mem_process_seqs] Processed 699864 reads in 152.703 CPU sec, 4.861 real sec [M::mem_process_seqs] Processed 699092 reads in 95.351 CPU sec, 3.029 real sec sorting block 55, #reads = 1085761 mem = 536879475 peak = 1062010880 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (55, 291970, 22, 69) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (161, 290, 962) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2564) [M::mem_pestat] mean and std.dev: (455.37, 425.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3365) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (161, 239, 350) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 728) [M::mem_pestat] mean and std.dev: (266.57, 135.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 917) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (330, 842, 1723) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4509) [M::mem_pestat] mean and std.dev: (802.47, 772.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5902) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (180, 269, 550) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1290) [M::mem_pestat] mean and std.dev: (354.02, 259.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1660) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 697138 sequences (100000006 bp) in 2.476 CPU sec, 2.605 real sec... [M::process] read 581082 sequences (83370225 bp) in 1.290 CPU sec, 1.284 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (57, 291374, 23, 69) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (200, 263, 1122) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2966) [M::mem_pestat] mean and std.dev: (638.65, 639.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3888) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (162, 242, 354) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 738) [M::mem_pestat] mean and std.dev: (268.97, 136.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 930) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (185, 325, 951) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2483) [M::mem_pestat] mean and std.dev: (479.61, 464.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3249) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (180, 257, 681) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1683) [M::mem_pestat] mean and std.dev: (409.88, 337.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2184) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 698934 reads in 147.120 CPU sec, 4.687 real sec sorting block 56, #reads = 1085070 mem = 536882673 peak = 1062010880 [M::mem_process_seqs] Processed 698026 reads in 91.464 CPU sec, 2.908 real sec sorting block 57, #reads = 1086941 mem = 536880596 peak = 1116393472 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (76, 290839, 30, 64) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (164, 246, 458) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1046) [M::mem_pestat] mean and std.dev: (276.75, 176.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1340) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 244, 358) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 746) [M::mem_pestat] mean and std.dev: (271.54, 137.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 940) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (90, 532, 1196) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3408) [M::mem_pestat] mean and std.dev: (633.50, 613.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4514) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (179, 246, 486) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1100) [M::mem_pestat] mean and std.dev: (322.39, 245.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1407) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (58, 242892, 25, 40) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (218, 317, 767) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1865) [M::mem_pestat] mean and std.dev: (447.26, 337.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2414) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 245, 359) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 749) [M::mem_pestat] mean and std.dev: (272.28, 138.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 944) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (215, 254, 1086) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2828) [M::mem_pestat] mean and std.dev: (406.14, 400.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3699) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (155, 227, 358) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 764) [M::mem_pestat] mean and std.dev: (227.94, 116.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 967) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 697138 reads in 131.555 CPU sec, 4.272 real sec [M::mem_process_seqs] Processed 581082 reads in 77.248 CPU sec, 2.509 real sec sorting block 58, #reads = 1086920 mem = 536879520 peak = 1116393472 os version: Linux 6.12.88 cpu vendor: GenuineIntel signature: 000a06d1 features: 1f8bfbff fffab20b extended: f1bf27eb 1b407f7e amd bits: 2c100800 00000121 brand: Intel(R) Xeon(R) 6975P-C threads: 31 algo: bwa-mem license: sentieon:klib=31 reads: 64156528 overall: 69971197952 mem 8216.811 user 313.330 sys 1281.857 real [main] Version: 0.7.17-r1188 [main] CMD: /opt/conda/share/sentieon-202308.03-3/libexec/bwa mem -K 100000000 -Y -R @RG\tID:A23MHWWLT4.1136_27F-T1-TDNA-1_A23MHWWLT4_1.L003\tPU:L003\tSM:1136_27F-T1-TDNA-1_A23MHWWLT4_1\tLB:1136_27F-T1-TDNA-1_A23MHWWLT4_1\tDS:s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta\tPL:ILLUMINA -t 31 ./BWAIndex/Homo_sapiens_assembly38.fasta.64 0001.1136_27F-T1-TDNA-1_A23MHWWLT4_1_R1.fastq.gz 0001.1136_27F-T1-TDNA-1_A23MHWWLT4_1_R2.fastq.gz [main] Real time: 1281.894 sec; CPU: 8530.144 sec sorting block 59, #reads = 516006 mem = 255299166 peak = 1116393472 uniq header count 1 merging 60 blocks sw version: sentieon-genomics-202308.03 os version: Linux 6.12.88 cpu vendor: GenuineIntel signature: 000a06d1 features: 1f8bfbff fffab20b extended: f1bf27eb 1b407f7e amd bits: 2c100800 00000121 brand: Intel(R) Xeon(R) 6975P-C threads: 31 max 192 algo: util-sort license: sentieon:util=1 output file size: 3630295906 output reads: 64696324 bam_mem_sort: 60 calls 26.060 user 0.435 sys 26.599 real bam_write: 60 calls 31.322 user 0.969 sys 32.478 real execute: 1 calls 12.810 user 0.879 sys 1301.280 real merge_files: 1 calls 12.796 user 0.856 sys 18.737 real parse_chunk: 952 calls 33.596 user 8.656 sys 42.817 real read_chunk: 2573 calls 24.356 user 23.582 sys 230.492 real sort_block: 1 calls 19.008 user 22.926 sys 222.400 real write_chunk: 1619 calls 12.427 user 0.682 sys 17.968 real overall: 2747232256 mem 730.197 user 43.372 sys 1301.299 real ls: cannot access '*.cram': No such file or directory