cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i 1136_3MV-T1-TDNA-1_A23MHWWLT4_1.md.bam --algo AlignmentStat 1136_3MV-T1-TDNA-1_A23MHWWLT4_1.sentieon.alignment_summary_metrics --algo InsertSizeMetricAlgo 1136_3MV-T1-TDNA-1_A23MHWWLT4_1.sentieon.insert_size_metrics --algo QualDistribution 1136_3MV-T1-TDNA-1_A23MHWWLT4_1.sentieon.quality_distribution_metrics --algo BaseDistributionByCycle 1136_3MV-T1-TDNA-1_A23MHWWLT4_1.sentieon.base_distribution_by_cycle_metrics --algo MeanQualityByCycle 1136_3MV-T1-TDNA-1_A23MHWWLT4_1.sentieon.quality_by_cycle_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:173000001, elapsed 10.0s, est remaining 189.1s, peak mem 3210MB, user 238.2s, sys 3.9s, output queue size 115
progress 10% @chr2:94000001, elapsed 18.1s, est remaining 163.2s, peak mem 5241MB, user 475.4s, sys 5.5s, output queue size 172
progress 15% @chr3:8000001, elapsed 26.1s, est remaining 147.9s, peak mem 6657MB, user 736.9s, sys 6.9s, output queue size 203
progress 20% @chr3:178000001, elapsed 33.1s, est remaining 132.4s, peak mem 6657MB, user 956.2s, sys 8.6s, output queue size 283
progress 25% @chr4:129000001, elapsed 39.7s, est remaining 119.0s, peak mem 6694MB, user 1165.5s, sys 9.4s, output queue size 302
progress 30% @chr5:102000001, elapsed 45.0s, est remaining 105.1s, peak mem 6938MB, user 1290.6s, sys 10.0s, output queue size 464
progress 35% @chr6:91000001, elapsed 53.5s, est remaining 99.3s, peak mem 7304MB, user 1546.1s, sys 11.5s, output queue size 625
progress 40% @chr7:65000001, elapsed 64.3s, est remaining 96.4s, peak mem 7976MB, user 1864.5s, sys 13.3s, output queue size 195
progress 45% @chr8:83000001, elapsed 74.8s, est remaining 91.5s, peak mem 8184MB, user 2187.3s, sys 15.1s, output queue size 356
progress 50% @chr9:94000001, elapsed 82.8s, est remaining 82.8s, peak mem 8284MB, user 2413.4s, sys 15.9s, output queue size 366
progress 55% @chr10:104000001, elapsed 92.5s, est remaining 75.7s, peak mem 11186MB, user 2700.2s, sys 17.1s, output queue size 485
progress 60% @chr11:65000001, elapsed 104.5s, est remaining 69.7s, peak mem 11186MB, user 3020.3s, sys 18.3s, output queue size 510
progress 65% @chr13:36000001, elapsed 114.8s, est remaining 61.8s, peak mem 11186MB, user 3321.2s, sys 19.2s, output queue size 672
progress 70% @chr14:69000001, elapsed 120.8s, est remaining 51.8s, peak mem 13177MB, user 3514.9s, sys 20.0s, output queue size 833
progress 75% @chr16:42000001, elapsed 133.2s, est remaining 44.4s, peak mem 14338MB, user 3870.0s, sys 20.8s, output queue size 995
progress 80% @chr18:27000001, elapsed 153.6s, est remaining 38.4s, peak mem 14617MB, user 4414.7s, sys 22.1s, output queue size 1062
progress 85% @chr20:43000001, elapsed 171.3s, est remaining 30.2s, peak mem 14617MB, user 4948.5s, sys 23.7s, output queue size 1224
progress 90% @chrX:30000001, elapsed 184.0s, est remaining 20.4s, peak mem 14679MB, user 5344.3s, sys 24.8s, output queue size 1386
progress 95% @chrY:54000001, elapsed 194.4s, est remaining 10.2s, peak mem 15985MB, user 5569.9s, sys 25.6s, output queue size 1548
progress 100% @chr8:127000001, elapsed 510.6s, est remaining 0.0s, peak mem 16005MB, user 6501.1s, sys 32.6s, output queue size 4972
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 192
algo: AlignmentStat InsertSizeMetricAlgo QualDistribution BaseDistributionByCycle MeanQualityByCycle
license: sentieon:Metrics=31
input file size: 66368244287
reads: 1256320583
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1068.060 user 25.325 sys 1092.291 real
done: 1 calls 0.056 user 0.004 sys 0.067 real
exec_no_coor: 1 calls 0.026 user 0.009 sys 0.048 real
execute: 1 calls 0.001 user 0.002 sys 511.374 real
idle: 9378 calls 0.435 user 0.052 sys 9346.486 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 16782811136 mem 6503.297 user 33.357 sys 512.800 real