cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i 659_d0M-T1-TDNA-1_A23MHWWLT4_1.md.bam --algo AlignmentStat 659_d0M-T1-TDNA-1_A23MHWWLT4_1.sentieon.alignment_summary_metrics --algo InsertSizeMetricAlgo 659_d0M-T1-TDNA-1_A23MHWWLT4_1.sentieon.insert_size_metrics --algo QualDistribution 659_d0M-T1-TDNA-1_A23MHWWLT4_1.sentieon.quality_distribution_metrics --algo BaseDistributionByCycle 659_d0M-T1-TDNA-1_A23MHWWLT4_1.sentieon.base_distribution_by_cycle_metrics --algo MeanQualityByCycle 659_d0M-T1-TDNA-1_A23MHWWLT4_1.sentieon.quality_by_cycle_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:188000001, elapsed 9.8s, est remaining 187.0s, peak mem 3630MB, user 228.5s, sys 3.0s, output queue size 146
progress 10% @chr2:91000001, elapsed 18.6s, est remaining 167.2s, peak mem 5095MB, user 495.7s, sys 5.6s, output queue size 117
progress 15% @chr3:13000001, elapsed 29.1s, est remaining 165.1s, peak mem 7682MB, user 796.1s, sys 7.7s, output queue size 203
progress 20% @chr3:128000001, elapsed 37.0s, est remaining 147.9s, peak mem 7949MB, user 1056.9s, sys 10.8s, output queue size 283
progress 25% @chr4:80000001, elapsed 44.2s, est remaining 132.6s, peak mem 7949MB, user 1288.9s, sys 11.6s, output queue size 302
progress 30% @chr5:107000001, elapsed 49.6s, est remaining 115.7s, peak mem 7975MB, user 1458.9s, sys 12.4s, output queue size 464
progress 35% @chr5:149000001, elapsed 57.7s, est remaining 107.2s, peak mem 8301MB, user 1684.2s, sys 13.5s, output queue size 625
progress 40% @chr7:66000001, elapsed 67.4s, est remaining 101.1s, peak mem 8415MB, user 1946.4s, sys 14.5s, output queue size 786
progress 45% @chr8:82000001, elapsed 79.5s, est remaining 97.2s, peak mem 9079MB, user 2281.6s, sys 15.6s, output queue size 948
progress 50% @chr9:33000001, elapsed 90.7s, est remaining 90.7s, peak mem 9382MB, user 2621.7s, sys 16.5s, output queue size 366
progress 55% @chr10:100000001, elapsed 102.9s, est remaining 84.2s, peak mem 9508MB, user 2980.2s, sys 17.6s, output queue size 527
progress 60% @chr11:134000001, elapsed 114.2s, est remaining 76.2s, peak mem 9519MB, user 3348.6s, sys 18.8s, output queue size 689
progress 65% @chr13:36000001, elapsed 126.5s, est remaining 68.1s, peak mem 9587MB, user 3702.3s, sys 20.0s, output queue size 672
progress 70% @chr14:85000001, elapsed 133.3s, est remaining 57.1s, peak mem 9610MB, user 3901.3s, sys 20.8s, output queue size 833
progress 75% @chr16:42000001, elapsed 146.2s, est remaining 48.7s, peak mem 9679MB, user 4300.4s, sys 21.8s, output queue size 995
progress 80% @chr18:29000001, elapsed 162.4s, est remaining 40.6s, peak mem 9776MB, user 4709.3s, sys 22.8s, output queue size 1157
progress 85% @chr18:63000001, elapsed 178.0s, est remaining 31.4s, peak mem 9776MB, user 5297.2s, sys 24.0s, output queue size 785
progress 90% @chrX:32000001, elapsed 188.1s, est remaining 20.9s, peak mem 9942MB, user 5617.0s, sys 24.9s, output queue size 947
progress 95% @chrY:55000001, elapsed 195.1s, est remaining 10.3s, peak mem 9942MB, user 5791.4s, sys 25.4s, output queue size 1109
progress 100% @chrX:67000001, elapsed 219.9s, est remaining 0.0s, peak mem 9942MB, user 6208.7s, sys 26.6s, output queue size 3540
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 192
algo: AlignmentStat InsertSizeMetricAlgo QualDistribution BaseDistributionByCycle MeanQualityByCycle
license: sentieon:Metrics=31
input file size: 62651370106
reads: 1242257820
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1020.624 user 20.641 sys 1041.200 real
done: 1 calls 0.039 user 0.010 sys 0.052 real
exec_no_coor: 1 calls 0.008 user 0.000 sys 0.019 real
execute: 1 calls 0.001 user 0.010 sys 220.002 real
idle: 648 calls 0.181 user 0.001 sys 614.832 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 10425581568 mem 6210.759 user 27.084 sys 221.404 real