cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i 1136_6G2-T1-TDNA-1_A23MHWWLT4_1.md.bam --algo HsMetricAlgo --targets_list targets/xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_AND_foresight_clarity.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed 1136_6G2-T1-TDNA-1_A23MHWWLT4_1_xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_AND_foresight_clarity.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:187000001, elapsed 4.6s, est remaining 87.4s, peak mem 3099MB, user 96.9s, sys 2.3s, output queue size 150
progress 10% @chr2:38000001, elapsed 7.8s, est remaining 70.1s, peak mem 3773MB, user 210.6s, sys 4.1s, output queue size 166
progress 15% @chr2:211000001, elapsed 11.2s, est remaining 63.3s, peak mem 5189MB, user 320.1s, sys 5.7s, output queue size 161
progress 20% @chr3:176000001, elapsed 14.3s, est remaining 57.3s, peak mem 5304MB, user 412.4s, sys 6.5s, output queue size 283
progress 25% @chr4:124000001, elapsed 16.9s, est remaining 50.8s, peak mem 5304MB, user 490.6s, sys 7.0s, output queue size 302
progress 30% @chr5:100000001, elapsed 18.9s, est remaining 44.0s, peak mem 5304MB, user 547.5s, sys 7.4s, output queue size 464
progress 35% @chr6:37000001, elapsed 22.0s, est remaining 40.9s, peak mem 5304MB, user 634.1s, sys 8.2s, output queue size 625
progress 40% @chr7:45000001, elapsed 25.5s, est remaining 38.2s, peak mem 5304MB, user 745.5s, sys 9.1s, output queue size 195
progress 45% @chr8:66000001, elapsed 29.4s, est remaining 35.9s, peak mem 5439MB, user 854.2s, sys 9.8s, output queue size 356
progress 50% @chr9:33000001, elapsed 32.3s, est remaining 32.3s, peak mem 5651MB, user 950.6s, sys 10.3s, output queue size 324
progress 55% @chr10:99000001, elapsed 36.3s, est remaining 29.7s, peak mem 5810MB, user 1069.7s, sys 11.1s, output queue size 348
progress 60% @chr11:134000001, elapsed 40.8s, est remaining 27.2s, peak mem 5822MB, user 1202.1s, sys 12.1s, output queue size 510
progress 65% @chr13:39000001, elapsed 44.4s, est remaining 23.9s, peak mem 5851MB, user 1323.4s, sys 12.9s, output queue size 167
progress 70% @chr14:72000001, elapsed 46.5s, est remaining 19.9s, peak mem 5858MB, user 1397.5s, sys 13.4s, output queue size 299
progress 75% @chr16:42000001, elapsed 51.0s, est remaining 17.0s, peak mem 6094MB, user 1515.4s, sys 14.1s, output queue size 461
progress 80% @chr16:2000001, elapsed 58.3s, est remaining 14.6s, peak mem 6299MB, user 1696.5s, sys 15.2s, output queue size 623
progress 85% @chr20:43000001, elapsed 65.4s, est remaining 11.5s, peak mem 6429MB, user 1943.6s, sys 16.5s, output queue size 351
progress 90% @chrX:30000001, elapsed 69.0s, est remaining 7.7s, peak mem 6516MB, user 2090.5s, sys 17.5s, output queue size 121
progress 95% @chrY:55000001, elapsed 71.0s, est remaining 3.7s, peak mem 6604MB, user 2143.6s, sys 18.0s, output queue size 240
progress 100% @chr22:23000001, elapsed 79.0s, est remaining 0.0s, peak mem 6604MB, user 2223.1s, sys 18.3s, output queue size 3635
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000c06f2
  features: bfebfbff 7ffefbff
  extended: f3bfb7ef fb417ffe
  amd bits: 2c100800 00000121
     brand: INTEL(R) XEON(R) PLATINUM 8559C
threads: 31 max 192
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 56390667151
reads: 1090474054
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 903.963 user 16.331 sys 919.638 real
done: 1 calls 0.387 user 0.059 sys 0.447 real
exec_no_coor: 1 calls 0.007 user 0.000 sys 0.014 real
execute: 1 calls 0.001 user 0.000 sys 78.993 real
idle: 278 calls 0.192 user 0.001 sys 241.614 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 6925234176 mem 2225.301 user 18.749 sys 80.784 real