This software is licensed to bgold@natera.com by Sentieon Inc. cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/util sort -r Homo_sapiens_assembly38.fasta -t 31 -o 1136_3LU-T1-TDNA-1_A23MHWWLT4_1.bam --sam2bam - This software is licensed to bgold@natera.com by Sentieon Inc. version: sentieon-genomics-202308.03 [M::bwa_idx_load_from_disk] read 3171 ALT contigs [M::main_mem] bwa index loaded in 1781.446 CPU sec, 67.883 real sec [M::process] read 680722 sequences (100000289 bp) in 1.629 CPU sec, 1.632 real sec... [M::process] read 680876 sequences (100000183 bp) in 1.855 CPU sec, 1.861 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (34, 283215, 4, 48) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (146, 221, 437) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1019) [M::mem_pestat] mean and std.dev: (276.50, 168.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1310) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (227, 356, 497) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1037) [M::mem_pestat] mean and std.dev: (371.84, 179.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1307) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (223, 285, 314) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (41, 496) [M::mem_pestat] mean and std.dev: (277.50, 80.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 600) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 680654 sequences (100000122 bp) in 1.847 CPU sec, 1.984 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (54, 283173, 4, 47) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (162, 304, 537) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1287) [M::mem_pestat] mean and std.dev: (312.06, 205.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1662) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (227, 356, 495) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1031) [M::mem_pestat] mean and std.dev: (371.35, 178.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1299) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (169, 276, 526) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1240) [M::mem_pestat] mean and std.dev: (302.49, 160.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1597) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 680658 sequences (100000242 bp) in 1.796 CPU sec, 2.016 real sec... [M::mem_process_seqs] Processed 680722 reads in 188.060 CPU sec, 6.592 real sec [M::mem_process_seqs] Processed 680876 reads in 120.304 CPU sec, 4.606 real sec sorting block 0, #reads = 1082836 mem = 536880236 peak = 582324224 [M::process] read 680356 sequences (100000158 bp) in 1.981 CPU sec, 2.477 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (46, 282677, 6, 35) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (139, 339, 616) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1570) [M::mem_pestat] mean and std.dev: (322.88, 205.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2047) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (227, 356, 492) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1022) [M::mem_pestat] mean and std.dev: (370.01, 176.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1287) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (195, 294, 362) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 696) [M::mem_pestat] mean and std.dev: (285.78, 144.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 864) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 680010 sequences (100000177 bp) in 2.042 CPU sec, 2.050 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 283221, 2, 32) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (169, 221, 405) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 877) [M::mem_pestat] mean and std.dev: (290.24, 190.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1113) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (228, 357, 493) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1023) [M::mem_pestat] mean and std.dev: (370.75, 176.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1288) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (227, 308, 360) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 626) [M::mem_pestat] mean and std.dev: (294.35, 97.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 759) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 680654 reads in 192.787 CPU sec, 6.752 real sec [M::mem_process_seqs] Processed 680658 reads in 126.311 CPU sec, 4.542 real sec sorting block 1, #reads = 1081992 mem = 536882171 peak = 712871936 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (32, 283235, 0, 33) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (178, 260, 610) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1474) [M::mem_pestat] mean and std.dev: (347.86, 308.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1906) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (229, 360, 497) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1033) [M::mem_pestat] mean and std.dev: (373.63, 178.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1301) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (213, 364, 587) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1335) [M::mem_pestat] mean and std.dev: (316.41, 131.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1709) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 679948 sequences (100000175 bp) in 2.323 CPU sec, 2.760 real sec... [M::process] read 679728 sequences (100000214 bp) in 1.916 CPU sec, 1.977 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (22, 282662, 1, 38) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (176, 356, 386) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 806) [M::mem_pestat] mean and std.dev: (300.95, 174.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1016) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (232, 364, 504) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1048) [M::mem_pestat] mean and std.dev: (377.32, 179.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1320) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (201, 314, 478) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1032) [M::mem_pestat] mean and std.dev: (340.29, 206.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1309) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 680356 reads in 196.343 CPU sec, 6.771 real sec [M::mem_process_seqs] Processed 680010 reads in 130.998 CPU sec, 4.600 real sec sorting block 2, #reads = 1082346 mem = 536878882 peak = 826961920 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (39, 282677, 1, 41) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (252, 375, 548) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1140) [M::mem_pestat] mean and std.dev: (342.23, 141.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1436) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (233, 368, 506) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1052) [M::mem_pestat] mean and std.dev: (379.41, 180.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1325) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (299, 351, 574) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1124) [M::mem_pestat] mean and std.dev: (355.36, 164.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1399) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 681342 sequences (100000208 bp) in 2.524 CPU sec, 2.930 real sec... [M::process] read 678608 sequences (100000163 bp) in 2.010 CPU sec, 2.115 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (27, 283044, 5, 35) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (182, 240, 375) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 761) [M::mem_pestat] mean and std.dev: (252.60, 145.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 954) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (235, 371, 511) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1063) [M::mem_pestat] mean and std.dev: (382.36, 181.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1339) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (166, 265, 349) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 715) [M::mem_pestat] mean and std.dev: (245.67, 93.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 898) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 679948 reads in 198.164 CPU sec, 7.071 real sec sorting block 3, #reads = 1081025 mem = 536877557 peak = 893575168 [M::mem_process_seqs] Processed 679728 reads in 128.638 CPU sec, 4.625 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (43, 283249, 1, 36) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (244, 341, 393) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 691) [M::mem_pestat] mean and std.dev: (306.95, 119.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 840) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (223, 354, 497) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1045) [M::mem_pestat] mean and std.dev: (370.31, 180.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1319) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (213, 314, 442) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 900) [M::mem_pestat] mean and std.dev: (296.19, 151.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1129) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 4, #reads = 1081225 mem = 536878601 peak = 902422528 [M::process] read 678356 sequences (100000270 bp) in 2.430 CPU sec, 2.857 real sec... [M::process] read 677944 sequences (100000169 bp) in 2.006 CPU sec, 2.086 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (46, 282110, 0, 34) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (136, 182, 588) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1492) [M::mem_pestat] mean and std.dev: (372.32, 370.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1944) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (242, 378, 515) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1061) [M::mem_pestat] mean and std.dev: (388.42, 181.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1334) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (212, 349, 5288) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 15440) [M::mem_pestat] mean and std.dev: (1973.74, 2812.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 20516) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 681342 reads in 204.229 CPU sec, 7.296 real sec [M::mem_process_seqs] Processed 678608 reads in 129.656 CPU sec, 4.625 real sec sorting block 5, #reads = 1081399 mem = 536877652 peak = 902422528 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (38, 282043, 3, 43) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (163, 379, 456) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1042) [M::mem_pestat] mean and std.dev: (358.21, 256.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1386) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (245, 382, 521) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1073) [M::mem_pestat] mean and std.dev: (391.50, 182.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1349) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (252, 305, 398) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 690) [M::mem_pestat] mean and std.dev: (312.93, 99.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 836) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677424 sequences (100000139 bp) in 2.560 CPU sec, 2.830 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (40, 281303, 5, 45) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (229, 284, 354) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 604) [M::mem_pestat] mean and std.dev: (282.82, 97.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 729) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (248, 386, 523) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1073) [M::mem_pestat] mean and std.dev: (394.18, 183.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1348) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (267, 354, 2659) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7443) [M::mem_pestat] mean and std.dev: (1148.18, 1404.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9835) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677300 sequences (100000184 bp) in 2.027 CPU sec, 2.140 real sec... [M::mem_process_seqs] Processed 678356 reads in 198.664 CPU sec, 7.008 real sec [M::mem_process_seqs] Processed 677944 reads in 130.949 CPU sec, 4.635 real sec sorting block 6, #reads = 1080404 mem = 536885153 peak = 902422528 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 281169, 2, 45) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (168, 286, 929) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2451) [M::mem_pestat] mean and std.dev: (462.22, 407.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3212) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (250, 388, 528) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1084) [M::mem_pestat] mean and std.dev: (397.30, 183.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1362) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (194, 282, 354) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 674) [M::mem_pestat] mean and std.dev: (289.17, 129.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 834) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677788 sequences (100000008 bp) in 2.304 CPU sec, 2.908 real sec... [M::process] read 677468 sequences (100000175 bp) in 2.132 CPU sec, 2.137 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (39, 282210, 7, 32) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (253, 329, 501) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 997) [M::mem_pestat] mean and std.dev: (310.48, 121.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1245) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (251, 388, 527) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1079) [M::mem_pestat] mean and std.dev: (397.08, 182.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1355) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (188, 221, 294) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 506) [M::mem_pestat] mean and std.dev: (254.34, 103.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 668) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 677424 reads in 198.941 CPU sec, 6.831 real sec [M::mem_process_seqs] Processed 677300 reads in 130.029 CPU sec, 4.549 real sec sorting block 7, #reads = 1080056 mem = 536878499 peak = 902422528 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (33, 280938, 2, 51) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (247, 297, 469) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 913) [M::mem_pestat] mean and std.dev: (315.00, 155.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1135) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (248, 385, 523) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1073) [M::mem_pestat] mean and std.dev: (394.10, 182.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1348) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (225, 344, 426) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 828) [M::mem_pestat] mean and std.dev: (341.27, 138.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1029) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677564 sequences (100000070 bp) in 2.698 CPU sec, 3.123 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (37, 281672, 2, 40) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (217, 270, 665) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1561) [M::mem_pestat] mean and std.dev: (299.19, 167.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2009) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (251, 387, 526) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1076) [M::mem_pestat] mean and std.dev: (396.19, 182.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1351) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (307, 311, 503) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 895) [M::mem_pestat] mean and std.dev: (346.37, 138.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1091) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 678514 sequences (100000241 bp) in 2.292 CPU sec, 2.292 real sec... [M::mem_process_seqs] Processed 677788 reads in 200.455 CPU sec, 6.950 real sec sorting block 8, #reads = 1080333 mem = 536877469 peak = 902422528 [M::mem_process_seqs] Processed 677468 reads in 131.928 CPU sec, 4.719 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (35, 281579, 0, 28) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (193, 383, 672) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1630) [M::mem_pestat] mean and std.dev: (373.70, 187.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2109) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (249, 384, 521) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1065) [M::mem_pestat] mean and std.dev: (393.24, 181.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1337) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (183, 229, 473) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1053) [M::mem_pestat] mean and std.dev: (273.88, 146.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1343) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 9, #reads = 1079353 mem = 536879890 peak = 940474368 [M::process] read 676758 sequences (100000275 bp) in 2.464 CPU sec, 3.088 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (22, 282310, 1, 54) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (154, 238, 378) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 826) [M::mem_pestat] mean and std.dev: (257.50, 122.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1050) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (239, 373, 515) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1067) [M::mem_pestat] mean and std.dev: (386.15, 182.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1343) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (234, 359, 447) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 873) [M::mem_pestat] mean and std.dev: (308.68, 124.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1086) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 676612 sequences (100000238 bp) in 2.037 CPU sec, 2.123 real sec... [M::mem_process_seqs] Processed 677564 reads in 200.540 CPU sec, 7.038 real sec [M::mem_process_seqs] Processed 678514 reads in 132.452 CPU sec, 4.687 real sec sorting block 10, #reads = 1081020 mem = 536877129 peak = 940474368 [M::process] read 676506 sequences (100000271 bp) in 2.859 CPU sec, 3.346 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (26, 280936, 0, 42) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (163, 228, 463) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1063) [M::mem_pestat] mean and std.dev: (277.08, 158.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1363) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (253, 388, 526) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1072) [M::mem_pestat] mean and std.dev: (397.68, 182.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1345) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (269, 367, 411) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 695) [M::mem_pestat] mean and std.dev: (338.64, 128.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 854) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 676446 sequences (100000025 bp) in 2.236 CPU sec, 2.536 real sec... [M::mem_process_seqs] Processed 676612 reads in 112.906 CPU sec, 3.937 real sec sorting block 11, #reads = 1079556 mem = 536880555 peak = 940474368 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (24, 281021, 1, 44) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (220, 309, 421) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 823) [M::mem_pestat] mean and std.dev: (286.95, 132.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1024) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (251, 384, 522) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1064) [M::mem_pestat] mean and std.dev: (394.69, 181.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1335) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (280, 382, 480) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 880) [M::mem_pestat] mean and std.dev: (348.07, 131.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1080) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (32, 281021, 10, 43) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (159, 187, 296) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 570) [M::mem_pestat] mean and std.dev: (194.59, 72.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 707) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (256, 392, 529) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1075) [M::mem_pestat] mean and std.dev: (400.38, 182.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1348) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (156, 156, 190) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (88, 258) [M::mem_pestat] mean and std.dev: (158.88, 12.30) [M::mem_pestat] low and high boundaries for proper pairs: (54, 292) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (197, 297, 525) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1181) [M::mem_pestat] mean and std.dev: (363.98, 222.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1509) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 676758 reads in 316.122 CPU sec, 11.200 real sec [M::process] read 676464 sequences (100000000 bp) in 2.236 CPU sec, 2.390 real sec... [M::mem_process_seqs] Processed 676506 reads in 151.688 CPU sec, 5.630 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (28, 280562, 2, 30) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (220, 427, 577) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1291) [M::mem_pestat] mean and std.dev: (361.65, 186.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1648) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (256, 392, 529) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1075) [M::mem_pestat] mean and std.dev: (400.52, 182.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1348) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (223, 251, 275) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (119, 379) [M::mem_pestat] mean and std.dev: (241.04, 49.28) [M::mem_pestat] low and high boundaries for proper pairs: (44, 438) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 12, #reads = 1078687 mem = 536883287 peak = 940474368 [M::process] read 676222 sequences (100000172 bp) in 2.599 CPU sec, 2.985 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (29, 280956, 3, 34) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (201, 272, 403) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 807) [M::mem_pestat] mean and std.dev: (296.14, 128.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1009) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (256, 389, 525) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1063) [M::mem_pestat] mean and std.dev: (398.20, 180.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1332) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (205, 273, 419) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 847) [M::mem_pestat] mean and std.dev: (298.24, 128.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1061) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 676248 sequences (100000257 bp) in 2.153 CPU sec, 2.217 real sec... [M::mem_process_seqs] Processed 676446 reads in 205.576 CPU sec, 6.970 real sec [M::mem_process_seqs] Processed 676464 reads in 133.438 CPU sec, 4.562 real sec sorting block 13, #reads = 1079343 mem = 536878838 peak = 940474368 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (25, 280804, 3, 32) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (134, 190, 229) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 419) [M::mem_pestat] mean and std.dev: (167.85, 47.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 514) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (256, 388, 524) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1060) [M::mem_pestat] mean and std.dev: (397.71, 180.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1328) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (180, 259, 308) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 564) [M::mem_pestat] mean and std.dev: (231.21, 88.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 692) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 676432 sequences (100000253 bp) in 3.004 CPU sec, 3.345 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (23, 280840, 4, 27) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (282, 482, 490) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 906) [M::mem_pestat] mean and std.dev: (350.85, 145.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1114) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (256, 388, 524) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1060) [M::mem_pestat] mean and std.dev: (397.56, 180.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1328) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (256, 335, 833) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1987) [M::mem_pestat] mean and std.dev: (453.12, 271.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2564) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 676546 sequences (100000294 bp) in 2.258 CPU sec, 2.410 real sec... [M::mem_process_seqs] Processed 676222 reads in 205.866 CPU sec, 6.720 real sec [M::mem_process_seqs] Processed 676248 reads in 132.953 CPU sec, 4.302 real sec sorting block 14, #reads = 1079260 mem = 536878914 peak = 940474368 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (42, 280560, 3, 41) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (169, 320, 463) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1051) [M::mem_pestat] mean and std.dev: (336.35, 205.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1345) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (254, 388, 524) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1064) [M::mem_pestat] mean and std.dev: (396.81, 181.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1334) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (301, 354, 646) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1336) [M::mem_pestat] mean and std.dev: (397.67, 178.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1681) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 676662 sequences (100000261 bp) in 2.715 CPU sec, 3.075 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (35, 281063, 1, 22) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (261, 285, 1333) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3477) [M::mem_pestat] mean and std.dev: (392.93, 335.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4549) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (253, 385, 521) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1057) [M::mem_pestat] mean and std.dev: (395.03, 180.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1325) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (130, 227, 472) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1156) [M::mem_pestat] mean and std.dev: (342.86, 286.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1498) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 676674 sequences (100000199 bp) in 2.202 CPU sec, 2.207 real sec... [M::mem_process_seqs] Processed 676432 reads in 203.135 CPU sec, 6.656 real sec [M::mem_process_seqs] Processed 676546 reads in 129.814 CPU sec, 4.214 real sec sorting block 15, #reads = 1078643 mem = 536879864 peak = 940474368 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (39, 280737, 2, 62) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (182, 248, 278) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 470) [M::mem_pestat] mean and std.dev: (229.29, 78.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 566) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (252, 382, 519) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1053) [M::mem_pestat] mean and std.dev: (393.08, 179.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1320) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (159, 301, 497) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1173) [M::mem_pestat] mean and std.dev: (279.00, 157.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1511) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 676662 sequences (100000077 bp) in 2.987 CPU sec, 3.324 real sec... sorting block 16, #reads = 1079556 mem = 536879827 peak = 940474368 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (23, 280984, 6, 50) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (166, 315, 460) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1048) [M::mem_pestat] mean and std.dev: (249.22, 119.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1342) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (251, 381, 517) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1049) [M::mem_pestat] mean and std.dev: (392.38, 178.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1315) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (227, 336, 538) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1160) [M::mem_pestat] mean and std.dev: (349.31, 160.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1471) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 675932 sequences (100000104 bp) in 2.067 CPU sec, 2.174 real sec... [M::mem_process_seqs] Processed 676662 reads in 202.345 CPU sec, 6.610 real sec [M::mem_process_seqs] Processed 676674 reads in 130.075 CPU sec, 4.260 real sec sorting block 17, #reads = 1078481 mem = 536879626 peak = 940474368 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (41, 280920, 3, 29) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (205, 251, 406) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 808) [M::mem_pestat] mean and std.dev: (289.23, 150.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1009) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (253, 383, 520) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1054) [M::mem_pestat] mean and std.dev: (393.90, 179.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1321) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (295, 351, 615) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1255) [M::mem_pestat] mean and std.dev: (461.18, 336.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1807) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 675964 sequences (100000199 bp) in 2.637 CPU sec, 2.992 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (38, 281021, 0, 30) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (231, 330, 487) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 999) [M::mem_pestat] mean and std.dev: (363.86, 153.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1255) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (259, 390, 526) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1060) [M::mem_pestat] mean and std.dev: (400.71, 182.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1327) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (277, 434, 1181) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2989) [M::mem_pestat] mean and std.dev: (575.40, 591.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3893) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 675960 sequences (100000267 bp) in 2.151 CPU sec, 2.161 real sec... [M::mem_process_seqs] Processed 676662 reads in 195.840 CPU sec, 6.329 real sec [M::mem_process_seqs] Processed 675932 reads in 125.695 CPU sec, 4.009 real sec sorting block 18, #reads = 1079036 mem = 536878889 peak = 940474368 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (25, 281314, 3, 54) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (155, 338, 751) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1943) [M::mem_pestat] mean and std.dev: (363.77, 215.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2539) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (256, 388, 525) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1063) [M::mem_pestat] mean and std.dev: (398.93, 182.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1332) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (166, 309, 524) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1240) [M::mem_pestat] mean and std.dev: (339.61, 213.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1598) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 675688 sequences (100000093 bp) in 2.792 CPU sec, 2.988 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (32, 281293, 2, 42) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (173, 391, 631) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1547) [M::mem_pestat] mean and std.dev: (341.38, 193.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2005) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (258, 390, 526) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1062) [M::mem_pestat] mean and std.dev: (400.31, 182.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1330) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (204, 379, 449) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 939) [M::mem_pestat] mean and std.dev: (347.62, 168.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1184) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 675934 sequences (100000102 bp) in 2.191 CPU sec, 2.201 real sec... [M::mem_process_seqs] Processed 675964 reads in 188.252 CPU sec, 6.011 real sec sorting block 19, #reads = 1079464 mem = 536879766 peak = 940474368 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (31, 281661, 2, 62) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (285, 391, 445) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 765) [M::mem_pestat] mean and std.dev: (360.50, 117.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 925) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (260, 392, 529) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1067) [M::mem_pestat] mean and std.dev: (402.69, 183.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1336) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (177, 274, 336) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 654) [M::mem_pestat] mean and std.dev: (247.61, 107.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 813) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 680144 sequences (100000075 bp) in 2.064 CPU sec, 2.073 real sec... [M::mem_process_seqs] Processed 675688 reads in 103.809 CPU sec, 3.300 real sec [M::mem_process_seqs] Processed 675960 reads in 263.054 CPU sec, 8.369 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (40, 281499, 3, 40) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (223, 345, 553) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1213) [M::mem_pestat] mean and std.dev: (376.11, 172.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1543) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (261, 393, 529) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1065) [M::mem_pestat] mean and std.dev: (403.35, 183.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1333) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (351, 611, 697) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1389) [M::mem_pestat] mean and std.dev: (450.69, 198.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1735) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 20, #reads = 1078559 mem = 536879623 peak = 940474368 [M::process] read 680444 sequences (100000300 bp) in 2.934 CPU sec, 3.051 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (35, 282851, 1, 59) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (149, 206, 461) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1085) [M::mem_pestat] mean and std.dev: (294.55, 219.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1397) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (231, 363, 504) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1050) [M::mem_pestat] mean and std.dev: (377.40, 180.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1323) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (269, 357, 496) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 950) [M::mem_pestat] mean and std.dev: (404.19, 226.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1312) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 675934 reads in 205.209 CPU sec, 6.525 real sec [M::mem_process_seqs] Processed 680144 reads in 128.634 CPU sec, 4.055 real sec [M::process] read 679890 sequences (100000136 bp) in 2.409 CPU sec, 2.458 real sec... sorting block 21, #reads = 1078642 mem = 536876489 peak = 940474368 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (45, 282397, 4, 38) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (154, 172, 279) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 529) [M::mem_pestat] mean and std.dev: (202.12, 80.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 654) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (229, 362, 502) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1048) [M::mem_pestat] mean and std.dev: (375.94, 180.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1321) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (200, 282, 426) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 878) [M::mem_pestat] mean and std.dev: (283.43, 131.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1104) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 680012 sequences (100000227 bp) in 2.586 CPU sec, 2.722 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (43, 282090, 2, 35) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (149, 230, 384) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 854) [M::mem_pestat] mean and std.dev: (256.48, 122.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1089) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (232, 363, 503) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1045) [M::mem_pestat] mean and std.dev: (377.24, 180.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1316) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (234, 342, 684) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1584) [M::mem_pestat] mean and std.dev: (342.00, 177.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2034) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 680060 sequences (100000292 bp) in 2.120 CPU sec, 2.114 real sec... [M::mem_process_seqs] Processed 680444 reads in 194.020 CPU sec, 6.191 real sec [M::mem_process_seqs] Processed 679890 reads in 124.258 CPU sec, 3.938 real sec sorting block 22, #reads = 1080555 mem = 536878663 peak = 940474368 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (34, 281989, 5, 48) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (219, 303, 546) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1200) [M::mem_pestat] mean and std.dev: (346.13, 190.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1527) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (233, 367, 507) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1055) [M::mem_pestat] mean and std.dev: (379.47, 180.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1329) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (321, 384, 480) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (3, 798) [M::mem_pestat] mean and std.dev: (373.33, 115.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 957) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 679882 sequences (100000242 bp) in 2.987 CPU sec, 3.103 real sec... [M::process] read 679264 sequences (100000180 bp) in 1.757 CPU sec, 1.766 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (27, 281284, 4, 40) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (160, 205, 276) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 508) [M::mem_pestat] mean and std.dev: (207.48, 84.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 624) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (232, 366, 505) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1051) [M::mem_pestat] mean and std.dev: (377.81, 179.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1324) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (253, 318, 602) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1300) [M::mem_pestat] mean and std.dev: (290.69, 163.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1649) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 680012 reads in 192.171 CPU sec, 6.118 real sec sorting block 23, #reads = 1082236 mem = 536878480 peak = 940474368 [M::mem_process_seqs] Processed 680060 reads in 125.796 CPU sec, 3.989 real sec sorting block 24, #reads = 1082433 mem = 536878115 peak = 1001340928 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (32, 281421, 3, 36) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (200, 341, 517) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1151) [M::mem_pestat] mean and std.dev: (337.31, 184.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1468) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (234, 370, 508) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1056) [M::mem_pestat] mean and std.dev: (380.59, 180.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1330) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (191, 225, 419) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 875) [M::mem_pestat] mean and std.dev: (268.00, 151.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1103) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 679166 sequences (100000219 bp) in 2.439 CPU sec, 2.541 real sec... [M::process] read 678920 sequences (100000206 bp) in 1.837 CPU sec, 1.850 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (61, 281713, 0, 32) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (251, 277, 447) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 839) [M::mem_pestat] mean and std.dev: (319.61, 158.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1035) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (236, 371, 509) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1055) [M::mem_pestat] mean and std.dev: (381.79, 179.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1328) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (161, 241, 344) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 710) [M::mem_pestat] mean and std.dev: (242.31, 106.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 893) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 679882 reads in 192.815 CPU sec, 6.138 real sec [M::mem_process_seqs] Processed 679264 reads in 123.932 CPU sec, 3.957 real sec sorting block 25, #reads = 1081814 mem = 536879490 peak = 1001340928 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (39, 282024, 3, 29) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (188, 273, 650) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1574) [M::mem_pestat] mean and std.dev: (328.76, 214.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2036) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (238, 374, 513) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1063) [M::mem_pestat] mean and std.dev: (384.43, 180.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1338) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (204, 274, 500) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1092) [M::mem_pestat] mean and std.dev: (325.63, 190.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1388) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 678558 sequences (100000040 bp) in 2.724 CPU sec, 2.841 real sec... [M::process] read 678246 sequences (100000213 bp) in 1.930 CPU sec, 1.932 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (46, 282218, 8, 26) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (122, 207, 327) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 737) [M::mem_pestat] mean and std.dev: (289.70, 200.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1091) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (240, 376, 513) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1059) [M::mem_pestat] mean and std.dev: (385.82, 180.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1332) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (168, 320, 382) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 810) [M::mem_pestat] mean and std.dev: (319.96, 159.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1024) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 679166 reads in 189.242 CPU sec, 6.021 real sec [M::mem_process_seqs] Processed 678920 reads in 122.061 CPU sec, 3.878 real sec sorting block 26, #reads = 1081522 mem = 536880166 peak = 1001340928 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (34, 281598, 2, 37) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (198, 323, 541) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1227) [M::mem_pestat] mean and std.dev: (306.84, 156.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1570) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (242, 382, 521) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1079) [M::mem_pestat] mean and std.dev: (391.57, 183.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1358) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (178, 233, 324) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 616) [M::mem_pestat] mean and std.dev: (267.57, 100.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 762) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677894 sequences (100000103 bp) in 2.672 CPU sec, 2.739 real sec... [M::process] read 677534 sequences (100000254 bp) in 1.680 CPU sec, 1.679 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (63, 281259, 4, 24) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (260, 309, 701) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1583) [M::mem_pestat] mean and std.dev: (352.17, 188.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2024) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (246, 386, 524) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1080) [M::mem_pestat] mean and std.dev: (394.34, 183.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1358) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (220, 220, 438) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 874) [M::mem_pestat] mean and std.dev: (271.87, 117.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1092) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 678558 reads in 182.541 CPU sec, 5.795 real sec sorting block 27, #reads = 1081250 mem = 536877088 peak = 1001340928 [M::mem_process_seqs] Processed 678246 reads in 117.444 CPU sec, 3.725 real sec sorting block 28, #reads = 1080716 mem = 536878802 peak = 1001340928 [M::process] read 677472 sequences (100000099 bp) in 2.274 CPU sec, 2.335 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (50, 281660, 1, 43) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (230, 307, 545) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1175) [M::mem_pestat] mean and std.dev: (354.82, 187.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1490) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (250, 389, 528) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1084) [M::mem_pestat] mean and std.dev: (397.30, 184.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1362) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (205, 376, 468) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 994) [M::mem_pestat] mean and std.dev: (317.86, 134.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1257) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677310 sequences (100000128 bp) in 2.263 CPU sec, 2.270 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (40, 281678, 3, 50) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (176, 354, 383) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 797) [M::mem_pestat] mean and std.dev: (297.72, 139.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1004) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (252, 392, 531) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1089) [M::mem_pestat] mean and std.dev: (400.07, 184.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1368) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (275, 404, 1012) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2486) [M::mem_pestat] mean and std.dev: (343.59, 192.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3223) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 677894 reads in 179.792 CPU sec, 5.690 real sec [M::mem_process_seqs] Processed 677534 reads in 113.893 CPU sec, 3.609 real sec sorting block 29, #reads = 1080542 mem = 536879161 peak = 1001340928 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (25, 281058, 6, 36) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (162, 212, 529) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1263) [M::mem_pestat] mean and std.dev: (324.74, 276.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1630) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (253, 395, 534) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1096) [M::mem_pestat] mean and std.dev: (401.81, 185.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1377) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (243, 371, 570) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1224) [M::mem_pestat] mean and std.dev: (343.55, 147.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1551) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677158 sequences (100000018 bp) in 2.595 CPU sec, 2.645 real sec... [M::process] read 677088 sequences (100000126 bp) in 2.060 CPU sec, 2.058 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (25, 281177, 6, 28) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (125, 295, 525) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1325) [M::mem_pestat] mean and std.dev: (299.60, 168.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1725) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (253, 391, 530) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1084) [M::mem_pestat] mean and std.dev: (399.30, 184.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1361) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (188, 227, 404) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 836) [M::mem_pestat] mean and std.dev: (308.43, 162.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1052) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 677472 reads in 172.965 CPU sec, 5.460 real sec [M::mem_process_seqs] Processed 677310 reads in 109.351 CPU sec, 3.463 real sec sorting block 30, #reads = 1080349 mem = 536878821 peak = 1001340928 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (33, 281404, 15, 23) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (173, 328, 438) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 968) [M::mem_pestat] mean and std.dev: (301.11, 109.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1233) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (253, 391, 528) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1078) [M::mem_pestat] mean and std.dev: (399.02, 183.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1353) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (968, 968, 1309) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (286, 1991) [M::mem_pestat] mean and std.dev: (1104.40, 167.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2332) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (216, 256, 297) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (54, 459) [M::mem_pestat] mean and std.dev: (241.41, 80.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 565) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 676926 sequences (100000021 bp) in 2.424 CPU sec, 2.473 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (33, 281191, 8, 53) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (177, 293, 658) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1620) [M::mem_pestat] mean and std.dev: (416.66, 351.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2101) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::process] read 676846 sequences (100000091 bp) in 2.140 CPU sec, 2.143 real sec... [M::mem_pestat] (25, 50, 75) percentile: (255, 393, 529) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1077) [M::mem_pestat] mean and std.dev: (399.85, 182.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1351) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (246, 330, 554) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1170) [M::mem_pestat] mean and std.dev: (336.48, 152.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1478) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 677158 reads in 168.131 CPU sec, 5.310 real sec [M::mem_process_seqs] Processed 677088 reads in 109.191 CPU sec, 3.452 real sec sorting block 31, #reads = 1079868 mem = 536877298 peak = 1001340928 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (50, 281025, 2, 26) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (160, 219, 365) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 775) [M::mem_pestat] mean and std.dev: (249.53, 140.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 980) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (253, 389, 525) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1069) [M::mem_pestat] mean and std.dev: (396.68, 180.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1341) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (156, 242, 306) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 606) [M::mem_pestat] mean and std.dev: (255.38, 124.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 756) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 676576 sequences (100000006 bp) in 2.773 CPU sec, 2.820 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (31, 281251, 8, 36) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (179, 186, 339) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 659) [M::mem_pestat] mean and std.dev: (240.13, 128.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 819) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (254, 389, 527) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1073) [M::mem_pestat] mean and std.dev: (397.77, 181.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1346) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (192, 252, 453) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 975) [M::mem_pestat] mean and std.dev: (286.69, 137.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1236) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 676362 sequences (100000115 bp) in 2.120 CPU sec, 2.120 real sec... [M::mem_process_seqs] Processed 676926 reads in 168.731 CPU sec, 5.322 real sec sorting block 32, #reads = 1079798 mem = 536878803 peak = 1001340928 [M::mem_process_seqs] Processed 676846 reads in 108.240 CPU sec, 3.400 real sec sorting block 33, #reads = 1079563 mem = 536879882 peak = 1001340928 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (31, 281129, 4, 35) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (232, 241, 429) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 823) [M::mem_pestat] mean and std.dev: (297.03, 162.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1020) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (255, 390, 526) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1068) [M::mem_pestat] mean and std.dev: (398.31, 180.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1339) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (150, 201, 390) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 870) [M::mem_pestat] mean and std.dev: (278.00, 183.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1110) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 676504 sequences (100000055 bp) in 2.696 CPU sec, 2.733 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (32, 280958, 2, 38) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (183, 226, 273) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (3, 453) [M::mem_pestat] mean and std.dev: (217.37, 76.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 543) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (257, 393, 529) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1073) [M::mem_pestat] mean and std.dev: (400.65, 181.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1345) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (224, 516, 555) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1217) [M::mem_pestat] mean and std.dev: (415.45, 223.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1548) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 676416 sequences (100000183 bp) in 2.120 CPU sec, 2.126 real sec... [M::mem_process_seqs] Processed 676576 reads in 167.444 CPU sec, 5.283 real sec [M::mem_process_seqs] Processed 676362 reads in 109.721 CPU sec, 3.455 real sec sorting block 34, #reads = 1079287 mem = 536877528 peak = 1001340928 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (27, 280704, 2, 36) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (234, 350, 667) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1533) [M::mem_pestat] mean and std.dev: (294.29, 150.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1966) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (256, 389, 523) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1057) [M::mem_pestat] mean and std.dev: (397.04, 179.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1324) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (248, 429, 717) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1655) [M::mem_pestat] mean and std.dev: (569.00, 480.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2489) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 676190 sequences (100000282 bp) in 2.826 CPU sec, 2.876 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (37, 280853, 2, 29) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (159, 270, 460) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1062) [M::mem_pestat] mean and std.dev: (265.45, 126.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1363) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::process] read 676144 sequences (100000066 bp) in 2.140 CPU sec, 2.141 real sec... [M::mem_pestat] (25, 50, 75) percentile: (257, 392, 527) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1067) [M::mem_pestat] mean and std.dev: (399.41, 180.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1337) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (183, 242, 390) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 804) [M::mem_pestat] mean and std.dev: (276.11, 113.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1011) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 676504 reads in 182.523 CPU sec, 5.769 real sec [M::mem_process_seqs] Processed 676416 reads in 116.640 CPU sec, 3.681 real sec sorting block 35, #reads = 1079540 mem = 536876723 peak = 1001340928 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (30, 281203, 0, 60) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (147, 239, 323) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 675) [M::mem_pestat] mean and std.dev: (260.90, 163.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 917) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (259, 395, 530) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1072) [M::mem_pestat] mean and std.dev: (402.32, 181.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1343) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (382, 513, 692) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1312) [M::mem_pestat] mean and std.dev: (486.30, 177.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1622) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 676360 sequences (100000283 bp) in 2.763 CPU sec, 2.804 real sec... [M::process] read 676620 sequences (100000002 bp) in 2.160 CPU sec, 2.162 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (42, 280681, 4, 54) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (165, 259, 356) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 738) [M::mem_pestat] mean and std.dev: (273.14, 112.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 929) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (257, 388, 521) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1049) [M::mem_pestat] mean and std.dev: (396.61, 178.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1313) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (191, 308, 445) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 953) [M::mem_pestat] mean and std.dev: (297.44, 137.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1207) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 676190 reads in 182.438 CPU sec, 5.765 real sec sorting block 36, #reads = 1079659 mem = 536882120 peak = 1001340928 [M::mem_process_seqs] Processed 676144 reads in 118.305 CPU sec, 3.745 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (39, 281067, 2, 41) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (294, 350, 680) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1452) [M::mem_pestat] mean and std.dev: (442.05, 264.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1838) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (255, 386, 519) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1047) [M::mem_pestat] mean and std.dev: (394.70, 178.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1311) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (255, 339, 644) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1422) [M::mem_pestat] mean and std.dev: (363.68, 190.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1811) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 676530 sequences (100000274 bp) in 2.798 CPU sec, 2.825 real sec... [M::process] read 676468 sequences (100000056 bp) in 2.146 CPU sec, 2.153 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (34, 280959, 2, 26) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (172, 268, 372) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 772) [M::mem_pestat] mean and std.dev: (256.43, 97.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 972) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (254, 385, 519) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1049) [M::mem_pestat] mean and std.dev: (394.32, 178.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1314) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (145, 223, 329) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 697) [M::mem_pestat] mean and std.dev: (235.44, 121.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 881) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 676360 reads in 181.453 CPU sec, 5.730 real sec sorting block 37, #reads = 1078539 mem = 536879327 peak = 1001340928 [M::mem_process_seqs] Processed 676620 reads in 115.386 CPU sec, 3.652 real sec sorting block 38, #reads = 1078312 mem = 536878814 peak = 1008713728 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (32, 281568, 1, 23) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (191, 342, 443) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 947) [M::mem_pestat] mean and std.dev: (303.59, 169.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1199) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (253, 385, 520) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1054) [M::mem_pestat] mean and std.dev: (394.67, 179.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1321) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (276, 389, 1085) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2703) [M::mem_pestat] mean and std.dev: (583.22, 467.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3512) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 676510 sequences (100000027 bp) in 2.770 CPU sec, 2.811 real sec... [M::process] read 676664 sequences (100000098 bp) in 2.200 CPU sec, 2.203 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (34, 280869, 5, 73) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (118, 201, 273) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 583) [M::mem_pestat] mean and std.dev: (199.81, 95.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 738) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (254, 386, 522) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1058) [M::mem_pestat] mean and std.dev: (395.59, 179.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1326) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (290, 378, 550) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1070) [M::mem_pestat] mean and std.dev: (409.45, 210.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1330) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 676530 reads in 181.611 CPU sec, 5.735 real sec [M::mem_process_seqs] Processed 676468 reads in 116.140 CPU sec, 3.679 real sec sorting block 39, #reads = 1078427 mem = 536881377 peak = 1008713728 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (36, 282148, 3, 42) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (287, 366, 1140) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2846) [M::mem_pestat] mean and std.dev: (646.00, 748.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3699) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (254, 385, 520) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1052) [M::mem_pestat] mean and std.dev: (395.14, 180.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1318) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (201, 275, 414) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 840) [M::mem_pestat] mean and std.dev: (301.11, 146.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1053) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 676578 sequences (100000129 bp) in 2.824 CPU sec, 2.884 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (37, 281512, 1, 40) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (187, 270, 1199) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3223) [M::mem_pestat] mean and std.dev: (373.30, 293.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4235) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (252, 382, 518) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1050) [M::mem_pestat] mean and std.dev: (392.79, 179.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1316) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (214, 310, 456) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 940) [M::mem_pestat] mean and std.dev: (281.21, 128.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1182) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 676506 sequences (100000200 bp) in 2.210 CPU sec, 2.210 real sec... [M::mem_process_seqs] Processed 676510 reads in 180.329 CPU sec, 5.695 real sec [M::mem_process_seqs] Processed 676664 reads in 115.992 CPU sec, 3.658 real sec sorting block 40, #reads = 1079322 mem = 536880074 peak = 1008713728 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (23, 281500, 2, 55) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (184, 255, 577) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1363) [M::mem_pestat] mean and std.dev: (298.53, 217.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1756) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (253, 384, 521) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1057) [M::mem_pestat] mean and std.dev: (395.11, 180.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1325) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (192, 263, 497) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1107) [M::mem_pestat] mean and std.dev: (333.24, 190.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1412) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 676584 sequences (100000150 bp) in 2.667 CPU sec, 2.714 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (35, 281367, 4, 30) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (193, 224, 390) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 784) [M::mem_pestat] mean and std.dev: (265.23, 115.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 981) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (253, 385, 521) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1057) [M::mem_pestat] mean and std.dev: (395.81, 181.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1325) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (202, 249, 462) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 982) [M::mem_pestat] mean and std.dev: (305.86, 147.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1242) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 676196 sequences (100000104 bp) in 2.170 CPU sec, 2.167 real sec... [M::mem_process_seqs] Processed 676578 reads in 172.819 CPU sec, 5.457 real sec sorting block 41, #reads = 1078883 mem = 536876604 peak = 1008713728 [M::mem_process_seqs] Processed 676506 reads in 110.627 CPU sec, 3.487 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (29, 282096, 1, 43) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (196, 266, 320) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 568) [M::mem_pestat] mean and std.dev: (275.79, 108.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 710) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (253, 385, 523) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1063) [M::mem_pestat] mean and std.dev: (396.90, 183.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1333) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (234, 354, 658) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1506) [M::mem_pestat] mean and std.dev: (356.03, 195.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1930) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677552 sequences (100000212 bp) in 2.857 CPU sec, 2.905 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (42, 282213, 3, 41) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (166, 312, 479) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1105) [M::mem_pestat] mean and std.dev: (310.73, 226.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1418) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (259, 394, 531) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1075) [M::mem_pestat] mean and std.dev: (403.50, 184.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1347) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (278, 429, 468) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 848) [M::mem_pestat] mean and std.dev: (362.54, 129.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1038) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 681274 sequences (100000030 bp) in 2.150 CPU sec, 2.152 real sec... [M::mem_process_seqs] Processed 676584 reads in 168.730 CPU sec, 5.313 real sec sorting block 42, #reads = 1077843 mem = 536878158 peak = 1008713728 [M::mem_process_seqs] Processed 676196 reads in 110.655 CPU sec, 3.486 real sec sorting block 43, #reads = 1078791 mem = 536877533 peak = 1050783744 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (24, 283134, 2, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (137, 253, 337) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 737) [M::mem_pestat] mean and std.dev: (251.95, 147.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 937) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (249, 384, 521) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1065) [M::mem_pestat] mean and std.dev: (394.47, 183.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1337) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (281, 349, 488) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 902) [M::mem_pestat] mean and std.dev: (333.89, 127.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1109) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 680730 sequences (100000093 bp) in 2.737 CPU sec, 2.778 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (30, 283153, 3, 46) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (199, 248, 389) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 769) [M::mem_pestat] mean and std.dev: (258.04, 100.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 959) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (225, 356, 497) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1041) [M::mem_pestat] mean and std.dev: (371.19, 179.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1313) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (206, 269, 373) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 707) [M::mem_pestat] mean and std.dev: (286.86, 121.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 874) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 680762 sequences (100000224 bp) in 2.160 CPU sec, 2.161 real sec... [M::mem_process_seqs] Processed 677552 reads in 174.498 CPU sec, 5.506 real sec [M::mem_process_seqs] Processed 681274 reads in 115.530 CPU sec, 3.648 real sec sorting block 44, #reads = 1079863 mem = 536880576 peak = 1050783744 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (27, 284148, 1, 49) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (286, 333, 453) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 787) [M::mem_pestat] mean and std.dev: (338.24, 159.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 977) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (228, 360, 500) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1044) [M::mem_pestat] mean and std.dev: (374.24, 179.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1316) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (207, 286, 498) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1080) [M::mem_pestat] mean and std.dev: (376.24, 276.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1484) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 680090 sequences (100000035 bp) in 2.636 CPU sec, 2.690 real sec... [M::process] read 680054 sequences (100000237 bp) in 1.720 CPU sec, 1.719 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (35, 283735, 7, 60) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (166, 301, 376) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 796) [M::mem_pestat] mean and std.dev: (283.81, 139.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1006) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (229, 364, 502) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1048) [M::mem_pestat] mean and std.dev: (375.98, 180.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1321) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (207, 297, 530) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1176) [M::mem_pestat] mean and std.dev: (322.65, 152.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1499) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 680730 reads in 169.608 CPU sec, 5.372 real sec sorting block 45, #reads = 1082079 mem = 536880249 peak = 1050783744 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (45, 283350, 1, 38) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (204, 338, 518) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1146) [M::mem_pestat] mean and std.dev: (363.23, 197.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1460) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (231, 364, 501) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1041) [M::mem_pestat] mean and std.dev: (376.17, 178.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1311) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (140, 247, 388) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 884) [M::mem_pestat] mean and std.dev: (271.08, 151.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1132) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 679928 sequences (100000164 bp) in 2.248 CPU sec, 2.255 real sec... [M::mem_process_seqs] Processed 680090 reads in 91.083 CPU sec, 2.870 real sec [M::mem_process_seqs] Processed 680762 reads in 223.217 CPU sec, 7.075 real sec sorting block 46, #reads = 1081414 mem = 536877832 peak = 1050783744 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (42, 283652, 6, 38) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (170, 360, 396) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 848) [M::mem_pestat] mean and std.dev: (296.00, 136.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1074) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (234, 366, 504) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1044) [M::mem_pestat] mean and std.dev: (378.25, 179.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1314) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (211, 289, 357) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 649) [M::mem_pestat] mean and std.dev: (291.88, 132.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 823) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 679484 sequences (100000220 bp) in 2.646 CPU sec, 2.690 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (46, 282718, 3, 34) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (147, 241, 343) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 735) [M::mem_pestat] mean and std.dev: (266.48, 155.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 931) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (233, 366, 502) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1040) [M::mem_pestat] mean and std.dev: (377.34, 178.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1309) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (247, 328, 470) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 916) [M::mem_pestat] mean and std.dev: (335.55, 140.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1139) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 680054 reads in 191.478 CPU sec, 6.043 real sec [M::process] read 679082 sequences (100000286 bp) in 2.215 CPU sec, 2.219 real sec... [M::mem_process_seqs] Processed 679928 reads in 116.823 CPU sec, 3.671 real sec sorting block 47, #reads = 1081403 mem = 536876978 peak = 1050783744 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (42, 282845, 0, 38) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (214, 245, 339) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 589) [M::mem_pestat] mean and std.dev: (255.32, 85.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 714) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (236, 370, 507) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1049) [M::mem_pestat] mean and std.dev: (380.84, 179.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1320) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (182, 296, 369) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 743) [M::mem_pestat] mean and std.dev: (266.47, 110.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 930) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 678820 sequences (100000198 bp) in 2.464 CPU sec, 2.568 real sec... [M::process] read 678568 sequences (100000003 bp) in 1.660 CPU sec, 1.651 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (33, 283384, 5, 33) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (164, 192, 367) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 773) [M::mem_pestat] mean and std.dev: (242.47, 118.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 976) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (240, 375, 511) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1053) [M::mem_pestat] mean and std.dev: (384.65, 179.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1324) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (190, 279, 470) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1030) [M::mem_pestat] mean and std.dev: (274.03, 118.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1310) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 679484 reads in 174.495 CPU sec, 5.537 real sec sorting block 48, #reads = 1080446 mem = 536882059 peak = 1050783744 [M::mem_process_seqs] Processed 679082 reads in 114.250 CPU sec, 3.621 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (36, 282918, 1, 38) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (208, 338, 488) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1048) [M::mem_pestat] mean and std.dev: (316.56, 125.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1328) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (242, 378, 516) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1064) [M::mem_pestat] mean and std.dev: (387.93, 181.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1338) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (254, 343, 623) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1361) [M::mem_pestat] mean and std.dev: (397.42, 232.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1730) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677848 sequences (100000094 bp) in 2.938 CPU sec, 3.030 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (40, 282235, 1, 21) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (234, 295, 452) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 888) [M::mem_pestat] mean and std.dev: (300.06, 115.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1106) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (243, 382, 520) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1074) [M::mem_pestat] mean and std.dev: (391.01, 182.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1351) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (204, 253, 516) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1140) [M::mem_pestat] mean and std.dev: (338.95, 241.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1452) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677642 sequences (100000123 bp) in 2.232 CPU sec, 2.231 real sec... [M::mem_process_seqs] Processed 678820 reads in 172.499 CPU sec, 5.437 real sec sorting block 49, #reads = 1080519 mem = 536877667 peak = 1050783744 [M::mem_process_seqs] Processed 678568 reads in 113.730 CPU sec, 3.584 real sec sorting block 50, #reads = 1080858 mem = 536878710 peak = 1050783744 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (29, 281955, 4, 35) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (375, 490, 1093) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2529) [M::mem_pestat] mean and std.dev: (594.96, 372.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3247) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::process] read 677298 sequences (100000066 bp) in 2.142 CPU sec, 2.210 real sec... [M::mem_pestat] (25, 50, 75) percentile: (247, 388, 530) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1096) [M::mem_pestat] mean and std.dev: (397.39, 185.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1379) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (184, 323, 389) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 799) [M::mem_pestat] mean and std.dev: (283.59, 102.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1004) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677216 sequences (100000210 bp) in 2.090 CPU sec, 2.090 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (39, 282144, 8, 54) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (152, 239, 405) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 911) [M::mem_pestat] mean and std.dev: (274.79, 150.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1164) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (250, 390, 529) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1087) [M::mem_pestat] mean and std.dev: (398.25, 184.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1366) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (218, 351, 461) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 947) [M::mem_pestat] mean and std.dev: (320.71, 136.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1190) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 677848 reads in 177.635 CPU sec, 5.630 real sec [M::mem_process_seqs] Processed 677642 reads in 114.805 CPU sec, 3.641 real sec sorting block 51, #reads = 1079784 mem = 536877384 peak = 1050783744 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (30, 282146, 4, 25) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (161, 264, 418) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 932) [M::mem_pestat] mean and std.dev: (278.57, 148.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1189) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (252, 394, 533) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1095) [M::mem_pestat] mean and std.dev: (401.58, 186.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1376) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (157, 216, 368) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 790) [M::mem_pestat] mean and std.dev: (259.32, 128.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1001) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677296 sequences (100000008 bp) in 2.451 CPU sec, 2.496 real sec... [M::process] read 677064 sequences (100000022 bp) in 1.710 CPU sec, 1.717 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (34, 282176, 0, 50) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (169, 267, 389) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 829) [M::mem_pestat] mean and std.dev: (256.17, 104.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1049) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (253, 393, 534) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1096) [M::mem_pestat] mean and std.dev: (401.88, 185.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1377) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (235, 278, 321) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (63, 493) [M::mem_pestat] mean and std.dev: (246.31, 61.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 579) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 677298 reads in 177.387 CPU sec, 5.628 real sec [M::mem_process_seqs] Processed 677216 reads in 113.866 CPU sec, 3.625 real sec sorting block 52, #reads = 1079608 mem = 536877913 peak = 1050783744 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (24, 282020, 4, 46) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (235, 474, 520) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1090) [M::mem_pestat] mean and std.dev: (376.67, 179.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1375) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (252, 392, 532) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1092) [M::mem_pestat] mean and std.dev: (400.67, 185.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1372) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (253, 381, 498) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 988) [M::mem_pestat] mean and std.dev: (342.43, 125.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1233) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677032 sequences (100000203 bp) in 2.582 CPU sec, 2.627 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (37, 281717, 5, 55) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (137, 202, 598) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1520) [M::mem_pestat] mean and std.dev: (285.60, 195.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1981) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (253, 393, 533) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1093) [M::mem_pestat] mean and std.dev: (401.64, 185.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1373) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (295, 380, 637) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1321) [M::mem_pestat] mean and std.dev: (391.52, 191.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1663) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 676876 sequences (100000263 bp) in 2.210 CPU sec, 2.214 real sec... [M::mem_process_seqs] Processed 677296 reads in 178.825 CPU sec, 5.650 real sec sorting block 53, #reads = 1079395 mem = 536877729 peak = 1050783744 [M::mem_process_seqs] Processed 677064 reads in 115.824 CPU sec, 3.662 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (41, 281365, 3, 65) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (174, 291, 430) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 942) [M::mem_pestat] mean and std.dev: (344.20, 191.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1198) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (254, 393, 533) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1091) [M::mem_pestat] mean and std.dev: (401.75, 184.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1370) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (170, 306, 481) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1103) [M::mem_pestat] mean and std.dev: (317.33, 172.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1414) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 676986 sequences (100000080 bp) in 3.683 CPU sec, 3.835 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (24, 281234, 5, 46) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (268, 324, 586) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1222) [M::mem_pestat] mean and std.dev: (288.11, 115.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1540) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (253, 393, 531) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1087) [M::mem_pestat] mean and std.dev: (400.76, 184.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1365) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (177, 246, 658) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1620) [M::mem_pestat] mean and std.dev: (338.67, 225.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2101) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 677032 reads in 181.951 CPU sec, 5.760 real sec sorting block 54, #reads = 1079037 mem = 536877984 peak = 1050783744 [M::mem_process_seqs] Processed 676876 reads in 118.766 CPU sec, 3.733 real sec [M::process] read 676996 sequences (100000099 bp) in 2.361 CPU sec, 2.388 real sec... sorting block 55, #reads = 1078633 mem = 536879357 peak = 1066512384 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (31, 281158, 5, 42) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (195, 262, 631) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1503) [M::mem_pestat] mean and std.dev: (282.00, 161.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1939) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (253, 391, 530) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1084) [M::mem_pestat] mean and std.dev: (400.16, 184.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1361) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (290, 422, 538) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1034) [M::mem_pestat] mean and std.dev: (378.14, 141.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1282) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677164 sequences (100000185 bp) in 2.528 CPU sec, 2.581 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (23, 281350, 4, 31) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (215, 344, 2336) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6578) [M::mem_pestat] mean and std.dev: (1444.96, 2045.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9628) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (250, 389, 528) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1084) [M::mem_pestat] mean and std.dev: (398.02, 183.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1362) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (191, 270, 447) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 959) [M::mem_pestat] mean and std.dev: (288.31, 134.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1215) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677216 sequences (100000155 bp) in 2.180 CPU sec, 2.178 real sec... [M::mem_process_seqs] Processed 676986 reads in 185.660 CPU sec, 5.880 real sec [M::mem_process_seqs] Processed 676996 reads in 120.539 CPU sec, 3.809 real sec sorting block 56, #reads = 1079742 mem = 536879175 peak = 1066512384 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (38, 281672, 9, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (205, 276, 326) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 568) [M::mem_pestat] mean and std.dev: (264.09, 92.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 689) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (252, 390, 530) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1086) [M::mem_pestat] mean and std.dev: (399.41, 184.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1364) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (177, 537, 794) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2028) [M::mem_pestat] mean and std.dev: (406.06, 246.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2645) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677374 sequences (100000205 bp) in 2.848 CPU sec, 2.910 real sec... [M::process] read 677228 sequences (100000003 bp) in 2.080 CPU sec, 2.078 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (36, 281355, 5, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (150, 215, 367) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 801) [M::mem_pestat] mean and std.dev: (251.51, 144.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1018) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (250, 388, 530) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1090) [M::mem_pestat] mean and std.dev: (398.56, 184.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1370) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (201, 325, 560) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1278) [M::mem_pestat] mean and std.dev: (343.10, 179.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1637) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 677164 reads in 184.822 CPU sec, 5.850 real sec [M::mem_process_seqs] Processed 677216 reads in 118.900 CPU sec, 3.761 real sec sorting block 57, #reads = 1078783 mem = 536878030 peak = 1066512384 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (36, 280925, 2, 54) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (195, 301, 395) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 795) [M::mem_pestat] mean and std.dev: (323.12, 150.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 995) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (248, 384, 525) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1079) [M::mem_pestat] mean and std.dev: (395.37, 184.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1356) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (220, 245, 475) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 985) [M::mem_pestat] mean and std.dev: (315.65, 136.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1240) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677270 sequences (100000139 bp) in 2.549 CPU sec, 2.598 real sec... [M::process] read 677088 sequences (100000036 bp) in 2.120 CPU sec, 2.116 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (31, 281378, 3, 41) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (193, 314, 506) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1132) [M::mem_pestat] mean and std.dev: (304.00, 144.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1445) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (247, 381, 521) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1069) [M::mem_pestat] mean and std.dev: (393.24, 183.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1343) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (188, 241, 452) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 980) [M::mem_pestat] mean and std.dev: (246.39, 119.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1244) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 677374 reads in 185.966 CPU sec, 5.887 real sec sorting block 58, #reads = 1079360 mem = 536876646 peak = 1066512384 [M::mem_process_seqs] Processed 677228 reads in 119.694 CPU sec, 3.791 real sec [M::process] read 677222 sequences (100000019 bp) in 2.304 CPU sec, 2.360 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 281727, 3, 48) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (193, 284, 366) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 712) [M::mem_pestat] mean and std.dev: (266.93, 127.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 885) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (248, 382, 523) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1073) [M::mem_pestat] mean and std.dev: (394.07, 183.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1348) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (241, 324, 460) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 898) [M::mem_pestat] mean and std.dev: (352.60, 177.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1117) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 676950 sequences (100000012 bp) in 1.608 CPU sec, 1.616 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (26, 281714, 2, 44) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (147, 225, 399) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 903) [M::mem_pestat] mean and std.dev: (242.27, 149.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1155) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (249, 382, 521) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1065) [M::mem_pestat] mean and std.dev: (393.31, 181.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1337) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (279, 360, 512) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 978) [M::mem_pestat] mean and std.dev: (331.39, 118.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1211) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (28, 281827, 1, 42) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (176, 257, 379) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 785) [M::mem_pestat] mean and std.dev: (258.63, 108.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 988) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (250, 386, 527) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1081) [M::mem_pestat] mean and std.dev: (397.17, 184.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1358) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (241, 319, 516) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1066) [M::mem_pestat] mean and std.dev: (387.38, 211.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1341) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 677270 reads in 258.013 CPU sec, 8.234 real sec sorting block 59, #reads = 1078948 mem = 536877304 peak = 1069940736 [M::mem_process_seqs] Processed 677222 reads in 195.259 CPU sec, 6.254 real sec [M::mem_process_seqs] Processed 677088 reads in 213.842 CPU sec, 6.876 real sec sorting block 60, #reads = 1079683 mem = 536877737 peak = 1103269888 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (32, 281929, 1, 39) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (246, 391, 497) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 999) [M::mem_pestat] mean and std.dev: (365.23, 154.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1250) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (249, 381, 517) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1053) [M::mem_pestat] mean and std.dev: (391.70, 179.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1321) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (224, 310, 413) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 791) [M::mem_pestat] mean and std.dev: (288.03, 108.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 980) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 676840 sequences (100000195 bp) in 2.999 CPU sec, 3.156 real sec... [M::mem_process_seqs] Processed 676950 reads in 109.219 CPU sec, 3.568 real sec sorting block 61, #reads = 1079382 mem = 536878314 peak = 1103269888 [M::process] read 676684 sequences (100000084 bp) in 2.524 CPU sec, 2.695 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (38, 281144, 3, 34) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (209, 331, 460) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 962) [M::mem_pestat] mean and std.dev: (303.79, 124.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1213) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (252, 386, 522) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1062) [M::mem_pestat] mean and std.dev: (396.09, 182.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1332) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (252, 385, 431) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 789) [M::mem_pestat] mean and std.dev: (361.47, 123.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 968) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 676472 sequences (100000185 bp) in 2.070 CPU sec, 2.073 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (30, 281257, 9, 50) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (159, 310, 3293) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 9561) [M::mem_pestat] mean and std.dev: (1419.03, 1968.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 12695) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (253, 386, 525) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1069) [M::mem_pestat] mean and std.dev: (397.41, 183.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1341) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (163, 361, 449) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1021) [M::mem_pestat] mean and std.dev: (336.50, 186.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1307) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 676840 reads in 182.478 CPU sec, 5.721 real sec [M::mem_process_seqs] Processed 676684 reads in 117.529 CPU sec, 3.683 real sec [M::process] read 676394 sequences (100000071 bp) in 2.219 CPU sec, 2.232 real sec... sorting block 62, #reads = 1077960 mem = 536879413 peak = 1103269888 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (25, 281068, 1, 41) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (220, 265, 432) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 856) [M::mem_pestat] mean and std.dev: (304.12, 124.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1068) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (256, 390, 528) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1072) [M::mem_pestat] mean and std.dev: (400.91, 184.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1344) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (218, 303, 627) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1445) [M::mem_pestat] mean and std.dev: (392.63, 262.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1854) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 676418 sequences (100000125 bp) in 2.648 CPU sec, 2.759 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (37, 281233, 1, 39) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (223, 294, 780) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1894) [M::mem_pestat] mean and std.dev: (362.68, 222.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2451) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (255, 388, 527) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1071) [M::mem_pestat] mean and std.dev: (400.00, 184.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1343) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (195, 285, 824) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2082) [M::mem_pestat] mean and std.dev: (316.87, 198.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2711) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 676488 sequences (100000144 bp) in 1.820 CPU sec, 1.820 real sec... [M::mem_process_seqs] Processed 676472 reads in 176.139 CPU sec, 5.584 real sec sorting block 63, #reads = 1078401 mem = 536878148 peak = 1103269888 [M::process] read 677342 sequences (100000268 bp) in 2.341 CPU sec, 2.351 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (25, 281044, 1, 46) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (216, 303, 555) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1233) [M::mem_pestat] mean and std.dev: (339.67, 208.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1572) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (254, 386, 525) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1067) [M::mem_pestat] mean and std.dev: (398.54, 183.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1338) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (166, 200, 249) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 415) [M::mem_pestat] mean and std.dev: (195.10, 49.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 498) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 676418 reads in 106.558 CPU sec, 3.380 real sec [M::mem_process_seqs] Processed 676394 reads in 246.192 CPU sec, 7.798 real sec sorting block 64, #reads = 1079063 mem = 536880191 peak = 1103269888 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (38, 281187, 3, 28) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (183, 282, 471) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1047) [M::mem_pestat] mean and std.dev: (309.40, 162.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1335) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (255, 387, 526) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1068) [M::mem_pestat] mean and std.dev: (399.45, 184.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1339) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (201, 349, 457) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 969) [M::mem_pestat] mean and std.dev: (327.75, 153.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1225) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 680652 sequences (100000123 bp) in 2.568 CPU sec, 2.649 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (38, 282276, 3, 39) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (233, 323, 587) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1295) [M::mem_pestat] mean and std.dev: (340.91, 168.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1649) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (249, 383, 522) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1068) [M::mem_pestat] mean and std.dev: (394.91, 183.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1341) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (302, 364, 731) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1589) [M::mem_pestat] mean and std.dev: (425.51, 248.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2018) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 676488 reads in 268.442 CPU sec, 8.480 real sec [M::mem_process_seqs] Processed 677342 reads in 118.519 CPU sec, 3.717 real sec [M::process] read 680010 sequences (100000129 bp) in 2.332 CPU sec, 2.367 real sec... sorting block 65, #reads = 1078755 mem = 536883052 peak = 1103269888 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 283398, 10, 38) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (236, 273, 400) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 728) [M::mem_pestat] mean and std.dev: (294.95, 126.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 892) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (229, 363, 509) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1069) [M::mem_pestat] mean and std.dev: (379.45, 185.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1349) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (305, 305, 305) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (305, 305) [M::mem_pestat] mean and std.dev: (305.00, 0.00) [M::mem_pestat] low and high boundaries for proper pairs: (305, 305) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (216, 309, 373) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 687) [M::mem_pestat] mean and std.dev: (287.24, 132.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 844) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 679872 sequences (100000206 bp) in 2.593 CPU sec, 2.648 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (47, 282651, 6, 39) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (188, 246, 519) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1181) [M::mem_pestat] mean and std.dev: (339.29, 249.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1512) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (233, 370, 515) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1079) [M::mem_pestat] mean and std.dev: (384.79, 186.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1361) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (208, 290, 473) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1003) [M::mem_pestat] mean and std.dev: (302.69, 136.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1268) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 679412 sequences (100000252 bp) in 2.090 CPU sec, 2.085 real sec... [M::mem_process_seqs] Processed 680652 reads in 173.196 CPU sec, 5.473 real sec sorting block 66, #reads = 1078124 mem = 536879302 peak = 1103269888 [M::mem_process_seqs] Processed 680010 reads in 113.139 CPU sec, 3.575 real sec sorting block 67, #reads = 1083188 mem = 536878625 peak = 1103269888 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (31, 282427, 0, 39) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (209, 323, 716) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1730) [M::mem_pestat] mean and std.dev: (366.25, 223.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2237) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (234, 372, 516) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1080) [M::mem_pestat] mean and std.dev: (386.08, 186.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1362) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (268, 383, 546) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1102) [M::mem_pestat] mean and std.dev: (362.72, 130.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1380) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 679100 sequences (100000054 bp) in 2.472 CPU sec, 2.522 real sec... [M::process] read 679082 sequences (100000208 bp) in 2.100 CPU sec, 2.104 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (28, 282771, 5, 31) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (151, 209, 424) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 970) [M::mem_pestat] mean and std.dev: (249.62, 141.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1243) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (237, 374, 518) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1080) [M::mem_pestat] mean and std.dev: (387.78, 186.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1361) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (235, 331, 397) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 721) [M::mem_pestat] mean and std.dev: (325.75, 128.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 883) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 679872 reads in 175.807 CPU sec, 5.559 real sec [M::mem_process_seqs] Processed 679412 reads in 114.127 CPU sec, 3.607 real sec sorting block 68, #reads = 1082224 mem = 536880672 peak = 1103269888 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (46, 282953, 2, 37) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (227, 420, 456) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 914) [M::mem_pestat] mean and std.dev: (373.23, 164.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1143) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (238, 375, 517) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1075) [M::mem_pestat] mean and std.dev: (388.28, 185.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1354) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (152, 312, 426) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 974) [M::mem_pestat] mean and std.dev: (348.08, 224.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1248) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 678762 sequences (100000073 bp) in 2.631 CPU sec, 2.685 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (46, 282461, 3, 45) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (229, 344, 1049) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2689) [M::mem_pestat] mean and std.dev: (345.54, 239.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3509) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (239, 375, 518) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1076) [M::mem_pestat] mean and std.dev: (388.69, 185.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1355) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (236, 371, 695) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1613) [M::mem_pestat] mean and std.dev: (440.02, 320.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2072) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 678654 sequences (100000126 bp) in 2.120 CPU sec, 2.121 real sec... [M::mem_process_seqs] Processed 679100 reads in 171.123 CPU sec, 5.401 real sec [M::mem_process_seqs] Processed 679082 reads in 110.804 CPU sec, 3.504 real sec sorting block 69, #reads = 1083182 mem = 536879171 peak = 1103269888 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (32, 282065, 0, 36) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (247, 337, 436) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 814) [M::mem_pestat] mean and std.dev: (337.90, 102.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1003) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (239, 376, 520) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1082) [M::mem_pestat] mean and std.dev: (389.73, 185.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1363) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (319, 366, 657) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1333) [M::mem_pestat] mean and std.dev: (473.92, 258.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1671) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 678196 sequences (100000124 bp) in 2.618 CPU sec, 2.704 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (37, 282130, 4, 38) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (177, 239, 320) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 606) [M::mem_pestat] mean and std.dev: (236.38, 84.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 749) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (243, 380, 521) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1077) [M::mem_pestat] mean and std.dev: (391.64, 185.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1355) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (222, 367, 643) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1485) [M::mem_pestat] mean and std.dev: (305.10, 124.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1906) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 678028 sequences (100000227 bp) in 2.120 CPU sec, 2.119 real sec... [M::mem_process_seqs] Processed 678762 reads in 171.992 CPU sec, 5.432 real sec sorting block 70, #reads = 1082225 mem = 536883579 peak = 1103269888 [M::mem_process_seqs] Processed 678654 reads in 110.771 CPU sec, 3.495 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (33, 282304, 1, 48) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (213, 331, 1093) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2853) [M::mem_pestat] mean and std.dev: (439.28, 322.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3733) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (245, 382, 522) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1076) [M::mem_pestat] mean and std.dev: (393.33, 185.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1353) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (194, 443, 703) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1721) [M::mem_pestat] mean and std.dev: (459.00, 313.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2230) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677750 sequences (100000105 bp) in 2.667 CPU sec, 2.730 real sec... [M::process] read 677438 sequences (100000150 bp) in 1.780 CPU sec, 1.786 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (29, 281617, 10, 30) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (246, 293, 391) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 681) [M::mem_pestat] mean and std.dev: (311.10, 94.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 826) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (248, 386, 528) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1088) [M::mem_pestat] mean and std.dev: (397.13, 186.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1368) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (507, 1041, 1041) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2109) [M::mem_pestat] mean and std.dev: (810.60, 384.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2643) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (167, 212, 468) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1070) [M::mem_pestat] mean and std.dev: (293.52, 166.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1371) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 678196 reads in 174.591 CPU sec, 5.520 real sec sorting block 71, #reads = 1081097 mem = 536879919 peak = 1103269888 [M::mem_process_seqs] Processed 678028 reads in 113.527 CPU sec, 3.605 real sec sorting block 72, #reads = 1081138 mem = 536880321 peak = 1116725248 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (35, 282291, 1, 30) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (200, 317, 466) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 998) [M::mem_pestat] mean and std.dev: (323.41, 155.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1264) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (248, 387, 529) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1091) [M::mem_pestat] mean and std.dev: (397.75, 186.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1372) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (202, 328, 626) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1474) [M::mem_pestat] mean and std.dev: (395.24, 219.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1898) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677444 sequences (100000291 bp) in 2.496 CPU sec, 2.548 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (19, 281435, 0, 19) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (215, 362, 487) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1031) [M::mem_pestat] mean and std.dev: (354.50, 196.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1303) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (250, 389, 532) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1096) [M::mem_pestat] mean and std.dev: (399.77, 186.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1378) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (271, 337, 446) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 796) [M::mem_pestat] mean and std.dev: (344.95, 113.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 971) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677474 sequences (100000267 bp) in 2.174 CPU sec, 2.182 real sec... [M::mem_process_seqs] Processed 677750 reads in 170.907 CPU sec, 5.401 real sec [M::mem_process_seqs] Processed 677438 reads in 111.562 CPU sec, 3.522 real sec sorting block 73, #reads = 1081650 mem = 536878657 peak = 1116725248 [M::process] read 677118 sequences (100000272 bp) in 2.719 CPU sec, 2.769 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (27, 282138, 2, 25) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (210, 310, 440) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 900) [M::mem_pestat] mean and std.dev: (303.46, 116.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1130) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (252, 394, 537) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1107) [M::mem_pestat] mean and std.dev: (403.63, 188.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1392) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (255, 351, 430) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 780) [M::mem_pestat] mean and std.dev: (323.50, 91.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 955) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677138 sequences (100000051 bp) in 2.170 CPU sec, 2.171 real sec... [M::mem_process_seqs] Processed 677474 reads in 98.656 CPU sec, 3.099 real sec sorting block 74, #reads = 1080513 mem = 536878732 peak = 1116725248 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (29, 282262, 0, 48) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (268, 337, 1674) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4486) [M::mem_pestat] mean and std.dev: (459.75, 464.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5892) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (252, 393, 534) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1098) [M::mem_pestat] mean and std.dev: (402.45, 188.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1380) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (165, 288, 460) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1050) [M::mem_pestat] mean and std.dev: (300.33, 161.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1345) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (49, 281954, 1, 35) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (205, 322, 667) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1591) [M::mem_pestat] mean and std.dev: (452.00, 317.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2053) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (254, 396, 539) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1109) [M::mem_pestat] mean and std.dev: (405.78, 189.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1394) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (162, 246, 470) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1086) [M::mem_pestat] mean and std.dev: (265.69, 147.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1394) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 677444 reads in 275.673 CPU sec, 8.706 real sec [M::process] read 677058 sequences (100000088 bp) in 2.203 CPU sec, 2.211 real sec... [M::mem_process_seqs] Processed 677118 reads in 135.942 CPU sec, 4.317 real sec sorting block 75, #reads = 1080909 mem = 536879670 peak = 1116725248 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (33, 282138, 0, 40) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (135, 213, 415) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 975) [M::mem_pestat] mean and std.dev: (257.72, 161.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1255) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (253, 396, 542) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1120) [M::mem_pestat] mean and std.dev: (406.09, 190.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1409) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (212, 477, 543) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1205) [M::mem_pestat] mean and std.dev: (381.65, 184.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1536) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677316 sequences (100000111 bp) in 2.725 CPU sec, 2.806 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (31, 281089, 4, 30) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (175, 211, 366) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 748) [M::mem_pestat] mean and std.dev: (244.00, 104.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 939) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (253, 395, 538) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1108) [M::mem_pestat] mean and std.dev: (405.02, 189.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1393) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (178, 513, 584) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1396) [M::mem_pestat] mean and std.dev: (509.83, 335.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1853) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677336 sequences (100000264 bp) in 2.130 CPU sec, 2.129 real sec... [M::mem_process_seqs] Processed 677138 reads in 178.756 CPU sec, 5.653 real sec [M::mem_process_seqs] Processed 677058 reads in 117.225 CPU sec, 3.697 real sec sorting block 76, #reads = 1079918 mem = 536880146 peak = 1116725248 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (31, 282140, 2, 40) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (175, 278, 361) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 733) [M::mem_pestat] mean and std.dev: (256.89, 135.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 919) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (251, 391, 534) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1100) [M::mem_pestat] mean and std.dev: (401.30, 187.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1383) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (285, 349, 410) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (35, 660) [M::mem_pestat] mean and std.dev: (329.20, 118.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 802) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677520 sequences (100000292 bp) in 2.523 CPU sec, 2.589 real sec... [M::process] read 677538 sequences (100000033 bp) in 1.700 CPU sec, 1.699 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (35, 282135, 3, 37) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (219, 315, 578) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1296) [M::mem_pestat] mean and std.dev: (304.14, 143.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1655) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (249, 390, 535) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1107) [M::mem_pestat] mean and std.dev: (400.79, 188.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1393) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (205, 331, 520) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1150) [M::mem_pestat] mean and std.dev: (325.35, 142.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1465) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 677316 reads in 176.105 CPU sec, 5.580 real sec sorting block 77, #reads = 1080370 mem = 536880453 peak = 1116725248 [M::mem_process_seqs] Processed 677336 reads in 116.817 CPU sec, 3.715 real sec [M::process] read 677638 sequences (100000282 bp) in 2.036 CPU sec, 2.091 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (30, 281769, 2, 48) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (179, 471, 637) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1553) [M::mem_pestat] mean and std.dev: (388.41, 213.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2011) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (248, 387, 531) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1097) [M::mem_pestat] mean and std.dev: (398.89, 187.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1380) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (236, 343, 486) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 986) [M::mem_pestat] mean and std.dev: (339.68, 151.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1236) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677906 sequences (100000211 bp) in 1.680 CPU sec, 1.674 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (32, 281677, 5, 33) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (159, 292, 370) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 792) [M::mem_pestat] mean and std.dev: (309.71, 173.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1003) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (247, 386, 530) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1096) [M::mem_pestat] mean and std.dev: (397.75, 187.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1379) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (193, 372, 837) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2125) [M::mem_pestat] mean and std.dev: (525.50, 399.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2769) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (34, 281693, 5, 35) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (225, 377, 699) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1647) [M::mem_pestat] mean and std.dev: (366.69, 202.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2121) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (244, 384, 528) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1096) [M::mem_pestat] mean and std.dev: (395.80, 186.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1380) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (278, 330, 616) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1292) [M::mem_pestat] mean and std.dev: (389.00, 232.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1630) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 677520 reads in 258.209 CPU sec, 8.245 real sec sorting block 78, #reads = 1080258 mem = 536878513 peak = 1116725248 [M::mem_process_seqs] Processed 677538 reads in 195.486 CPU sec, 6.260 real sec [M::mem_process_seqs] Processed 677638 reads in 214.522 CPU sec, 6.883 real sec sorting block 79, #reads = 1079577 mem = 536882169 peak = 1116725248 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (44, 282175, 10, 47) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (175, 272, 293) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 529) [M::mem_pestat] mean and std.dev: (248.50, 90.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 647) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (244, 382, 525) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1087) [M::mem_pestat] mean and std.dev: (394.10, 185.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1368) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (610, 1419, 1419) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3037) [M::mem_pestat] mean and std.dev: (1000.22, 448.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3846) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (246, 331, 552) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1164) [M::mem_pestat] mean and std.dev: (346.95, 147.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1470) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 677950 sequences (100000102 bp) in 3.110 CPU sec, 3.277 real sec... [M::mem_process_seqs] Processed 677906 reads in 101.693 CPU sec, 3.330 real sec sorting block 80, #reads = 1079882 mem = 536879951 peak = 1116725248 [M::process] read 677724 sequences (100000297 bp) in 2.550 CPU sec, 2.681 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (35, 281828, 2, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (256, 333, 585) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1243) [M::mem_pestat] mean and std.dev: (402.79, 245.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1572) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (243, 380, 524) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1086) [M::mem_pestat] mean and std.dev: (393.13, 185.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1367) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (230, 331, 485) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 995) [M::mem_pestat] mean and std.dev: (329.36, 153.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1250) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677694 sequences (100000289 bp) in 2.200 CPU sec, 2.193 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (45, 282218, 4, 51) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (206, 253, 291) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (36, 461) [M::mem_pestat] mean and std.dev: (233.78, 72.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 546) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (244, 382, 525) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1087) [M::mem_pestat] mean and std.dev: (394.23, 186.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1368) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (178, 437, 602) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1450) [M::mem_pestat] mean and std.dev: (404.68, 245.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1874) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 677950 reads in 181.146 CPU sec, 5.702 real sec [M::mem_process_seqs] Processed 677724 reads in 116.738 CPU sec, 3.655 real sec [M::process] read 677758 sequences (100000066 bp) in 2.306 CPU sec, 2.341 real sec... sorting block 81, #reads = 1081101 mem = 536878081 peak = 1116725248 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (23, 282311, 5, 44) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (238, 428, 535) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1129) [M::mem_pestat] mean and std.dev: (343.95, 148.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1426) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (244, 381, 526) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1090) [M::mem_pestat] mean and std.dev: (394.68, 186.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1372) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (121, 251, 453) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1117) [M::mem_pestat] mean and std.dev: (255.27, 169.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1449) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677726 sequences (100000183 bp) in 2.637 CPU sec, 2.711 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (36, 281977, 2, 41) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (206, 329, 579) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1325) [M::mem_pestat] mean and std.dev: (367.37, 177.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1698) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (243, 376, 518) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1068) [M::mem_pestat] mean and std.dev: (389.86, 183.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1343) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (161, 264, 404) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 890) [M::mem_pestat] mean and std.dev: (276.49, 156.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1133) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677348 sequences (100000059 bp) in 1.960 CPU sec, 1.954 real sec... [M::mem_process_seqs] Processed 677694 reads in 178.177 CPU sec, 5.637 real sec sorting block 82, #reads = 1080181 mem = 536877865 peak = 1116725248 [M::mem_process_seqs] Processed 677758 reads in 115.582 CPU sec, 3.646 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (24, 282066, 7, 40) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (184, 317, 400) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 832) [M::mem_pestat] mean and std.dev: (278.76, 108.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1048) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (245, 378, 518) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1064) [M::mem_pestat] mean and std.dev: (390.47, 183.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1337) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (226, 297, 402) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 754) [M::mem_pestat] mean and std.dev: (330.52, 140.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 930) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677258 sequences (100000127 bp) in 2.499 CPU sec, 2.559 real sec... [M::process] read 677268 sequences (100000049 bp) in 2.050 CPU sec, 2.048 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (35, 281639, 3, 37) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (284, 351, 554) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1094) [M::mem_pestat] mean and std.dev: (372.36, 147.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1364) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (247, 383, 522) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1072) [M::mem_pestat] mean and std.dev: (394.28, 184.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1347) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (207, 286, 379) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 723) [M::mem_pestat] mean and std.dev: (313.68, 150.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 914) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 677726 reads in 175.169 CPU sec, 5.543 real sec sorting block 83, #reads = 1080405 mem = 536879763 peak = 1116725248 [M::mem_process_seqs] Processed 677348 reads in 114.158 CPU sec, 3.617 real sec sorting block 84, #reads = 1079322 mem = 536881840 peak = 1116725248 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (29, 281616, 0, 36) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (160, 305, 472) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1096) [M::mem_pestat] mean and std.dev: (284.08, 160.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1408) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (248, 383, 524) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1076) [M::mem_pestat] mean and std.dev: (394.93, 184.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1352) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (213, 262, 405) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 789) [M::mem_pestat] mean and std.dev: (292.38, 115.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 981) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 676808 sequences (100000032 bp) in 3.000 CPU sec, 3.152 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (34, 281813, 3, 29) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (130, 192, 314) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 682) [M::mem_pestat] mean and std.dev: (199.69, 115.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 866) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (248, 384, 523) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1073) [M::mem_pestat] mean and std.dev: (395.03, 183.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1348) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (212, 288, 423) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 845) [M::mem_pestat] mean and std.dev: (307.61, 150.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1056) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 676904 sequences (100000135 bp) in 2.170 CPU sec, 2.164 real sec... [M::mem_process_seqs] Processed 677258 reads in 172.266 CPU sec, 5.427 real sec [M::mem_process_seqs] Processed 677268 reads in 112.222 CPU sec, 3.538 real sec sorting block 85, #reads = 1078947 mem = 536884538 peak = 1116725248 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (26, 282354, 7, 32) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (166, 222, 309) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 595) [M::mem_pestat] mean and std.dev: (220.92, 82.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 738) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (252, 388, 530) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1086) [M::mem_pestat] mean and std.dev: (399.88, 185.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1364) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (206, 294, 358) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 662) [M::mem_pestat] mean and std.dev: (273.59, 110.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 814) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 676860 sequences (100000089 bp) in 2.910 CPU sec, 2.991 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (28, 281818, 2, 41) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (149, 282, 349) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 749) [M::mem_pestat] mean and std.dev: (267.79, 143.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 949) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (251, 387, 528) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1082) [M::mem_pestat] mean and std.dev: (398.82, 185.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1359) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (264, 342, 385) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (22, 627) [M::mem_pestat] mean and std.dev: (332.13, 116.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 799) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 676838 sequences (100000236 bp) in 2.190 CPU sec, 2.192 real sec... [M::mem_process_seqs] Processed 676808 reads in 169.030 CPU sec, 5.320 real sec [M::mem_process_seqs] Processed 676904 reads in 109.847 CPU sec, 3.463 real sec sorting block 86, #reads = 1079680 mem = 536879484 peak = 1116725248 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (32, 282341, 3, 41) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (148, 273, 389) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 871) [M::mem_pestat] mean and std.dev: (269.77, 130.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1112) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (251, 386, 528) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1082) [M::mem_pestat] mean and std.dev: (398.69, 186.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1359) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (232, 325, 409) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 763) [M::mem_pestat] mean and std.dev: (314.74, 124.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 940) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 680274 sequences (100000008 bp) in 2.837 CPU sec, 2.882 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (55, 281908, 9, 40) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (167, 259, 397) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 857) [M::mem_pestat] mean and std.dev: (245.41, 119.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1087) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (251, 386, 526) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1076) [M::mem_pestat] mean and std.dev: (398.50, 185.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1351) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (236, 317, 878) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2162) [M::mem_pestat] mean and std.dev: (349.59, 219.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2804) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 676860 reads in 163.061 CPU sec, 5.134 real sec [M::process] read 682760 sequences (100000119 bp) in 2.317 CPU sec, 2.323 real sec... sorting block 87, #reads = 1079903 mem = 536887073 peak = 1116725248 [M::mem_process_seqs] Processed 676838 reads in 106.074 CPU sec, 3.334 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (31, 283714, 3, 46) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (191, 281, 347) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 659) [M::mem_pestat] mean and std.dev: (282.68, 116.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 815) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (230, 366, 514) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1082) [M::mem_pestat] mean and std.dev: (382.58, 187.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1366) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (230, 408, 479) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 977) [M::mem_pestat] mean and std.dev: (355.67, 143.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1226) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 683772 sequences (100000166 bp) in 2.687 CPU sec, 2.749 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (31, 284817, 1, 28) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (186, 238, 575) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1353) [M::mem_pestat] mean and std.dev: (348.43, 245.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1742) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (215, 351, 510) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1100) [M::mem_pestat] mean and std.dev: (373.27, 190.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1395) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (269, 344, 570) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1172) [M::mem_pestat] mean and std.dev: (351.08, 155.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1473) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 682368 sequences (100000053 bp) in 2.260 CPU sec, 2.262 real sec... [M::mem_process_seqs] Processed 680274 reads in 184.917 CPU sec, 5.842 real sec sorting block 88, #reads = 1079001 mem = 536881488 peak = 1116725248 [M::mem_process_seqs] Processed 682760 reads in 122.744 CPU sec, 3.878 real sec sorting block 89, #reads = 1077580 mem = 536884440 peak = 1117552640 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (31, 285366, 1, 33) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (207, 228, 333) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 585) [M::mem_pestat] mean and std.dev: (257.59, 104.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 711) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (211, 342, 496) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1066) [M::mem_pestat] mean and std.dev: (364.78, 185.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1351) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (208, 289, 440) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 904) [M::mem_pestat] mean and std.dev: (307.87, 131.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1136) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 681726 sequences (100000128 bp) in 2.877 CPU sec, 2.947 real sec... [M::process] read 681206 sequences (100000268 bp) in 2.190 CPU sec, 2.195 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (30, 284578, 0, 41) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (149, 258, 499) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1199) [M::mem_pestat] mean and std.dev: (298.19, 155.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1549) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (217, 352, 504) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1078) [M::mem_pestat] mean and std.dev: (371.25, 185.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1365) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (193, 224, 307) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 535) [M::mem_pestat] mean and std.dev: (233.58, 82.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 649) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 683772 reads in 187.821 CPU sec, 5.932 real sec [M::mem_process_seqs] Processed 682368 reads in 122.333 CPU sec, 3.870 real sec sorting block 90, #reads = 1079116 mem = 536877740 peak = 1117552640 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (38, 283402, 3, 25) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (181, 328, 673) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1657) [M::mem_pestat] mean and std.dev: (380.20, 277.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2149) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (221, 358, 511) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1091) [M::mem_pestat] mean and std.dev: (376.09, 186.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1381) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (163, 274, 397) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 865) [M::mem_pestat] mean and std.dev: (326.76, 185.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1099) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 681032 sequences (100000085 bp) in 2.802 CPU sec, 2.843 real sec... [M::process] read 681032 sequences (100000210 bp) in 2.230 CPU sec, 2.232 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (37, 283249, 0, 29) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (227, 357, 472) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 962) [M::mem_pestat] mean and std.dev: (348.97, 170.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1207) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (224, 362, 512) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1088) [M::mem_pestat] mean and std.dev: (378.25, 185.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1376) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (208, 265, 604) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1396) [M::mem_pestat] mean and std.dev: (310.19, 164.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1792) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 681726 reads in 192.461 CPU sec, 6.083 real sec [M::mem_process_seqs] Processed 681206 reads in 124.308 CPU sec, 3.935 real sec sorting block 91, #reads = 1080419 mem = 536879152 peak = 1117552640 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (27, 282698, 4, 33) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (291, 371, 470) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 828) [M::mem_pestat] mean and std.dev: (361.83, 171.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1047) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::process] read 682334 sequences (100000270 bp) in 2.313 CPU sec, 2.363 real sec... [M::mem_pestat] (25, 50, 75) percentile: (225, 363, 515) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1095) [M::mem_pestat] mean and std.dev: (379.34, 186.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1385) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (213, 290, 512) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1110) [M::mem_pestat] mean and std.dev: (318.90, 158.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1409) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 680062 sequences (100000135 bp) in 1.730 CPU sec, 1.730 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (28, 283208, 1, 31) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (165, 247, 443) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 999) [M::mem_pestat] mean and std.dev: (291.93, 173.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1277) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (223, 362, 513) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1093) [M::mem_pestat] mean and std.dev: (378.22, 185.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1383) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (139, 213, 310) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 652) [M::mem_pestat] mean and std.dev: (221.17, 100.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 823) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 681032 reads in 186.919 CPU sec, 5.939 real sec sorting block 92, #reads = 1080278 mem = 536878704 peak = 1117552640 [M::mem_process_seqs] Processed 681032 reads in 117.475 CPU sec, 3.741 real sec sorting block 93, #reads = 1080723 mem = 536883370 peak = 1117552640 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (25, 283495, 2, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (176, 286, 421) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 911) [M::mem_pestat] mean and std.dev: (259.71, 109.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1156) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::process] read 679918 sequences (100000016 bp) in 2.509 CPU sec, 2.551 real sec... [M::mem_pestat] (25, 50, 75) percentile: (215, 347, 497) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1061) [M::mem_pestat] mean and std.dev: (367.18, 183.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1343) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (178, 313, 441) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 967) [M::mem_pestat] mean and std.dev: (272.27, 145.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1230) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 679860 sequences (100000059 bp) in 2.150 CPU sec, 2.150 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (28, 282801, 2, 32) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (194, 275, 596) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1400) [M::mem_pestat] mean and std.dev: (325.63, 164.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1802) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (230, 372, 520) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1100) [M::mem_pestat] mean and std.dev: (384.68, 185.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1390) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (253, 348, 424) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 766) [M::mem_pestat] mean and std.dev: (330.84, 102.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 937) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 682334 reads in 185.206 CPU sec, 5.860 real sec [M::mem_process_seqs] Processed 680062 reads in 118.495 CPU sec, 3.760 real sec sorting block 94, #reads = 1080053 mem = 536879436 peak = 1117552640 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (19, 282247, 8, 31) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (186, 277, 563) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1317) [M::mem_pestat] mean and std.dev: (329.53, 227.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1694) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (232, 374, 521) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1099) [M::mem_pestat] mean and std.dev: (386.34, 186.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1388) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (220, 255, 783) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1909) [M::mem_pestat] mean and std.dev: (348.36, 285.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2472) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 678858 sequences (100000118 bp) in 2.607 CPU sec, 2.661 real sec... [M::process] read 679676 sequences (100000098 bp) in 1.850 CPU sec, 1.842 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (36, 282889, 1, 38) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (235, 387, 662) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1516) [M::mem_pestat] mean and std.dev: (342.53, 218.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1943) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (232, 374, 520) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1096) [M::mem_pestat] mean and std.dev: (385.36, 184.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1384) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (199, 297, 366) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 700) [M::mem_pestat] mean and std.dev: (252.40, 80.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 867) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 679918 reads in 179.969 CPU sec, 5.697 real sec [M::mem_process_seqs] Processed 679860 reads in 112.620 CPU sec, 3.567 real sec sorting block 95, #reads = 1078729 mem = 536878580 peak = 1117552640 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (40, 281993, 3, 57) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (293, 351, 492) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 890) [M::mem_pestat] mean and std.dev: (375.11, 187.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1123) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (239, 384, 530) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1112) [M::mem_pestat] mean and std.dev: (393.04, 185.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1403) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (182, 356, 523) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1205) [M::mem_pestat] mean and std.dev: (338.66, 172.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1546) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 679360 sequences (100000068 bp) in 2.797 CPU sec, 2.837 real sec... [M::process] read 680492 sequences (100000225 bp) in 2.190 CPU sec, 2.190 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (19, 282677, 1, 39) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (178, 220, 334) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 646) [M::mem_pestat] mean and std.dev: (230.88, 82.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 802) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (234, 377, 524) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1104) [M::mem_pestat] mean and std.dev: (387.40, 184.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1394) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (218, 295, 540) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1184) [M::mem_pestat] mean and std.dev: (398.45, 251.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1506) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 678858 reads in 181.485 CPU sec, 5.725 real sec [M::mem_process_seqs] Processed 679676 reads in 114.165 CPU sec, 3.615 real sec sorting block 96, #reads = 1076959 mem = 536877634 peak = 1117552640 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (24, 282015, 3, 38) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (209, 263, 374) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 704) [M::mem_pestat] mean and std.dev: (274.50, 137.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 869) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (236, 379, 523) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1097) [M::mem_pestat] mean and std.dev: (388.74, 184.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1384) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (205, 299, 488) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1054) [M::mem_pestat] mean and std.dev: (322.92, 176.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1337) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 679926 sequences (100000147 bp) in 2.341 CPU sec, 2.398 real sec... [M::process] read 678334 sequences (100000091 bp) in 1.680 CPU sec, 1.678 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (35, 283351, 4, 37) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (185, 347, 452) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 986) [M::mem_pestat] mean and std.dev: (308.32, 144.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1253) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (227, 364, 511) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1079) [M::mem_pestat] mean and std.dev: (378.48, 183.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1363) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (322, 424, 433) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (100, 655) [M::mem_pestat] mean and std.dev: (385.70, 142.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 956) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 679360 reads in 180.873 CPU sec, 5.741 real sec sorting block 97, #reads = 1077315 mem = 536880331 peak = 1117552640 [M::mem_process_seqs] Processed 680492 reads in 118.212 CPU sec, 3.758 real sec sorting block 98, #reads = 1078219 mem = 536878949 peak = 1117552640 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (30, 283146, 2, 54) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (232, 336, 430) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 826) [M::mem_pestat] mean and std.dev: (294.28, 128.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1024) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (228, 364, 509) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1071) [M::mem_pestat] mean and std.dev: (377.72, 180.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1352) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (192, 284, 517) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1167) [M::mem_pestat] mean and std.dev: (347.13, 178.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1492) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 678782 sequences (100000065 bp) in 2.598 CPU sec, 2.641 real sec... [M::process] read 679044 sequences (100000058 bp) in 1.643 CPU sec, 1.644 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (44, 281825, 0, 53) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (209, 368, 469) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 989) [M::mem_pestat] mean and std.dev: (307.50, 155.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1249) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (241, 386, 529) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1105) [M::mem_pestat] mean and std.dev: (393.60, 184.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1393) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (188, 297, 468) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1028) [M::mem_pestat] mean and std.dev: (325.35, 181.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1308) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 679926 reads in 191.137 CPU sec, 6.067 real sec [M::mem_process_seqs] Processed 678334 reads in 122.959 CPU sec, 3.917 real sec sorting block 99, #reads = 1076932 mem = 536880924 peak = 1117552640 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (30, 282314, 0, 21) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (243, 413, 1553) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4173) [M::mem_pestat] mean and std.dev: (647.55, 571.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5483) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (239, 384, 528) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1106) [M::mem_pestat] mean and std.dev: (392.73, 185.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1395) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (238, 409, 516) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1072) [M::mem_pestat] mean and std.dev: (392.24, 164.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1350) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 678120 sequences (100000246 bp) in 2.686 CPU sec, 2.744 real sec... [M::process] read 678142 sequences (100000214 bp) in 2.210 CPU sec, 2.212 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (46, 282622, 2, 31) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (178, 355, 756) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1912) [M::mem_pestat] mean and std.dev: (323.44, 200.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2490) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (237, 380, 523) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1095) [M::mem_pestat] mean and std.dev: (389.03, 183.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1381) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (218, 464, 609) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1391) [M::mem_pestat] mean and std.dev: (377.31, 212.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1782) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 678782 reads in 186.395 CPU sec, 5.890 real sec [M::mem_process_seqs] Processed 679044 reads in 122.693 CPU sec, 3.880 real sec sorting block 100, #reads = 1076393 mem = 536878088 peak = 1117552640 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (24, 282070, 2, 46) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (208, 289, 300) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (24, 484) [M::mem_pestat] mean and std.dev: (270.12, 85.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 613) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (246, 389, 530) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1098) [M::mem_pestat] mean and std.dev: (395.44, 182.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1382) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (269, 347, 360) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (87, 542) [M::mem_pestat] mean and std.dev: (322.85, 69.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 633) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677632 sequences (100000221 bp) in 2.900 CPU sec, 2.940 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (28, 282725, 1, 36) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (163, 228, 435) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 979) [M::mem_pestat] mean and std.dev: (263.96, 125.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1251) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (243, 380, 516) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1062) [M::mem_pestat] mean and std.dev: (387.30, 178.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1335) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (157, 285, 376) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 814) [M::mem_pestat] mean and std.dev: (295.19, 161.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1033) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677124 sequences (100000128 bp) in 2.220 CPU sec, 2.225 real sec... [M::mem_process_seqs] Processed 678120 reads in 178.895 CPU sec, 5.640 real sec sorting block 101, #reads = 1076784 mem = 536879631 peak = 1117552640 [M::mem_process_seqs] Processed 678142 reads in 111.190 CPU sec, 3.512 real sec [M::process] read 677106 sequences (100000218 bp) in 2.072 CPU sec, 2.122 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (34, 282314, 1, 27) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (219, 271, 332) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 558) [M::mem_pestat] mean and std.dev: (273.94, 104.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 692) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (249, 388, 524) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1074) [M::mem_pestat] mean and std.dev: (394.00, 180.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1349) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (214, 335, 543) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1201) [M::mem_pestat] mean and std.dev: (358.08, 230.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1530) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 676642 sequences (100000284 bp) in 1.620 CPU sec, 1.622 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (26, 282752, 5, 33) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (142, 187, 235) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 421) [M::mem_pestat] mean and std.dev: (198.50, 68.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 514) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (250, 387, 524) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1072) [M::mem_pestat] mean and std.dev: (394.56, 179.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1346) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (199, 282, 505) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1117) [M::mem_pestat] mean and std.dev: (325.45, 182.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1423) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 677632 reads in 172.445 CPU sec, 5.477 real sec sorting block 102, #reads = 1075240 mem = 536878719 peak = 1117552640 [M::mem_process_seqs] Processed 677124 reads in 110.242 CPU sec, 3.505 real sec sorting block 103, #reads = 1074855 mem = 536879630 peak = 1117552640 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (31, 282598, 2, 35) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (161, 268, 377) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 809) [M::mem_pestat] mean and std.dev: (238.89, 101.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1025) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (250, 388, 524) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1072) [M::mem_pestat] mean and std.dev: (394.42, 179.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1346) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (307, 390, 539) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1003) [M::mem_pestat] mean and std.dev: (397.22, 176.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1235) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 676846 sequences (100000169 bp) in 2.651 CPU sec, 2.686 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (29, 282069, 8, 27) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (144, 297, 437) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1023) [M::mem_pestat] mean and std.dev: (305.44, 170.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1316) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (256, 393, 532) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1084) [M::mem_pestat] mean and std.dev: (400.73, 182.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1360) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (280, 287, 473) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 859) [M::mem_pestat] mean and std.dev: (348.93, 149.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1052) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 676976 sequences (100000296 bp) in 2.190 CPU sec, 2.192 real sec... [M::mem_process_seqs] Processed 677106 reads in 169.293 CPU sec, 5.336 real sec [M::mem_process_seqs] Processed 676642 reads in 107.752 CPU sec, 3.405 real sec sorting block 104, #reads = 1075113 mem = 536877866 peak = 1117552640 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (34, 282026, 5, 43) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (140, 201, 286) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 578) [M::mem_pestat] mean and std.dev: (224.78, 120.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 724) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (253, 391, 529) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1081) [M::mem_pestat] mean and std.dev: (398.76, 181.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1357) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (180, 334, 477) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1071) [M::mem_pestat] mean and std.dev: (288.56, 127.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1368) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 676760 sequences (100000042 bp) in 2.561 CPU sec, 2.591 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (40, 282571, 3, 27) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (277, 319, 478) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 880) [M::mem_pestat] mean and std.dev: (350.75, 166.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1081) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (253, 390, 528) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1078) [M::mem_pestat] mean and std.dev: (397.57, 180.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1353) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (163, 324, 484) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1126) [M::mem_pestat] mean and std.dev: (288.92, 153.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1447) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 676868 sequences (100000157 bp) in 2.170 CPU sec, 2.174 real sec... [M::mem_process_seqs] Processed 676846 reads in 171.166 CPU sec, 5.397 real sec sorting block 105, #reads = 1074376 mem = 536877841 peak = 1117552640 [M::mem_process_seqs] Processed 676976 reads in 110.191 CPU sec, 3.477 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (64, 282151, 2, 33) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (167, 282, 391) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 839) [M::mem_pestat] mean and std.dev: (276.17, 122.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1063) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (252, 390, 529) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1083) [M::mem_pestat] mean and std.dev: (398.19, 182.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1360) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (193, 227, 502) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1120) [M::mem_pestat] mean and std.dev: (307.09, 166.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1429) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 676536 sequences (100000127 bp) in 2.796 CPU sec, 2.830 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (50, 282430, 3, 50) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (143, 378, 431) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1007) [M::mem_pestat] mean and std.dev: (320.04, 178.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1295) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (253, 392, 531) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1087) [M::mem_pestat] mean and std.dev: (399.86, 183.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1365) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (204, 446, 714) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1734) [M::mem_pestat] mean and std.dev: (492.23, 395.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2244) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677076 sequences (100000150 bp) in 2.180 CPU sec, 2.177 real sec... [M::mem_process_seqs] Processed 676760 reads in 166.030 CPU sec, 5.222 real sec sorting block 106, #reads = 1074201 mem = 536877259 peak = 1117552640 [M::mem_process_seqs] Processed 676868 reads in 183.056 CPU sec, 5.775 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (34, 282250, 6, 36) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (147, 351, 377) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 837) [M::mem_pestat] mean and std.dev: (290.03, 157.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1067) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (255, 394, 535) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1095) [M::mem_pestat] mean and std.dev: (402.48, 184.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1375) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (220, 358, 429) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 847) [M::mem_pestat] mean and std.dev: (336.69, 144.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1056) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 687096 sequences (100000203 bp) in 2.652 CPU sec, 2.684 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (43, 283088, 8, 42) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (164, 241, 417) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 923) [M::mem_pestat] mean and std.dev: (272.10, 139.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1176) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (251, 393, 536) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1106) [M::mem_pestat] mean and std.dev: (402.23, 186.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1391) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (226, 318, 430) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 838) [M::mem_pestat] mean and std.dev: (296.72, 105.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1042) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 686194 sequences (100000132 bp) in 2.250 CPU sec, 2.253 real sec... [M::mem_process_seqs] Processed 676536 reads in 166.215 CPU sec, 5.232 real sec sorting block 107, #reads = 1075138 mem = 536887442 peak = 1117552640 [M::mem_process_seqs] Processed 677076 reads in 109.282 CPU sec, 3.431 real sec sorting block 108, #reads = 1074975 mem = 536879402 peak = 1171390464 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (31, 286593, 4, 40) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (140, 209, 520) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1280) [M::mem_pestat] mean and std.dev: (234.63, 145.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1660) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (196, 314, 457) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 979) [M::mem_pestat] mean and std.dev: (335.86, 167.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1240) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (218, 287, 423) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 833) [M::mem_pestat] mean and std.dev: (319.08, 150.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1038) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 687158 sequences (100000168 bp) in 2.744 CPU sec, 2.771 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (35, 285838, 3, 37) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (164, 286, 490) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1142) [M::mem_pestat] mean and std.dev: (319.09, 200.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1468) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (200, 320, 462) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 986) [M::mem_pestat] mean and std.dev: (340.11, 168.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1248) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (154, 232, 322) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 658) [M::mem_pestat] mean and std.dev: (249.17, 119.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 826) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 684772 sequences (100000146 bp) in 2.260 CPU sec, 2.261 real sec... [M::mem_process_seqs] Processed 687096 reads in 179.745 CPU sec, 5.670 real sec [M::mem_process_seqs] Processed 686194 reads in 117.342 CPU sec, 3.700 real sec sorting block 109, #reads = 1075830 mem = 536878303 peak = 1171390464 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (47, 286196, 3, 35) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (133, 276, 426) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1012) [M::mem_pestat] mean and std.dev: (288.29, 176.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1305) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (197, 314, 451) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 959) [M::mem_pestat] mean and std.dev: (332.62, 163.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1213) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (262, 365, 444) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 808) [M::mem_pestat] mean and std.dev: (337.47, 132.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 990) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 683680 sequences (100000005 bp) in 2.614 CPU sec, 2.641 real sec... [M::process] read 682968 sequences (100000167 bp) in 2.260 CPU sec, 2.258 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (14, 285660, 2, 41) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (188, 270, 315) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 569) [M::mem_pestat] mean and std.dev: (258.93, 100.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 696) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (206, 330, 467) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 989) [M::mem_pestat] mean and std.dev: (345.42, 167.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1250) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (232, 305, 434) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 838) [M::mem_pestat] mean and std.dev: (290.97, 112.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1040) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 687158 reads in 183.775 CPU sec, 5.800 real sec sorting block 110, #reads = 1076576 mem = 536878243 peak = 1171390464 [M::mem_process_seqs] Processed 684772 reads in 118.901 CPU sec, 3.761 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (37, 285790, 1, 39) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (161, 246, 365) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 773) [M::mem_pestat] mean and std.dev: (256.38, 140.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 977) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (211, 337, 476) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1006) [M::mem_pestat] mean and std.dev: (352.14, 169.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1271) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (247, 299, 431) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 799) [M::mem_pestat] mean and std.dev: (307.41, 99.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 983) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 682170 sequences (100000096 bp) in 2.827 CPU sec, 2.848 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (52, 284835, 1, 28) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (191, 271, 708) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1742) [M::mem_pestat] mean and std.dev: (356.38, 282.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2259) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (214, 343, 483) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1021) [M::mem_pestat] mean and std.dev: (357.22, 172.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1290) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (169, 212, 362) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 748) [M::mem_pestat] mean and std.dev: (245.63, 119.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 941) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 680912 sequences (100000210 bp) in 2.240 CPU sec, 2.242 real sec... [M::mem_process_seqs] Processed 683680 reads in 173.942 CPU sec, 5.480 real sec sorting block 111, #reads = 1074546 mem = 536879028 peak = 1171390464 [M::mem_process_seqs] Processed 682968 reads in 112.354 CPU sec, 3.545 real sec sorting block 112, #reads = 1076760 mem = 536878328 peak = 1171390464 [M::process] read 680816 sequences (100000078 bp) in 2.107 CPU sec, 2.147 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (35, 284963, 4, 37) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (290, 399, 438) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 734) [M::mem_pestat] mean and std.dev: (356.97, 116.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 882) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (218, 349, 489) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1031) [M::mem_pestat] mean and std.dev: (362.36, 173.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1302) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (238, 472, 672) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1540) [M::mem_pestat] mean and std.dev: (387.56, 188.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1974) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 680972 sequences (100000168 bp) in 1.690 CPU sec, 1.694 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (24, 284171, 3, 42) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (142, 249, 482) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1162) [M::mem_pestat] mean and std.dev: (295.70, 199.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1502) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (225, 358, 496) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1038) [M::mem_pestat] mean and std.dev: (369.21, 174.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1309) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (187, 272, 508) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1150) [M::mem_pestat] mean and std.dev: (315.76, 155.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1471) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (26, 284316, 4, 32) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (207, 275, 478) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1020) [M::mem_pestat] mean and std.dev: (331.08, 149.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1291) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (227, 363, 504) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1058) [M::mem_pestat] mean and std.dev: (373.48, 176.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1335) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (175, 284, 612) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1486) [M::mem_pestat] mean and std.dev: (372.79, 305.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1923) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 682170 reads in 248.934 CPU sec, 7.944 real sec [M::mem_process_seqs] Processed 680912 reads in 184.413 CPU sec, 5.899 real sec [M::mem_process_seqs] Processed 680816 reads in 201.144 CPU sec, 6.447 real sec sorting block 113, #reads = 1076874 mem = 536881883 peak = 1171390464 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (57, 284144, 3, 51) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (158, 203, 623) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1553) [M::mem_pestat] mean and std.dev: (227.44, 137.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2018) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (227, 364, 505) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1061) [M::mem_pestat] mean and std.dev: (373.85, 177.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1339) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (232, 287, 330) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (36, 526) [M::mem_pestat] mean and std.dev: (260.00, 84.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 624) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 114, #reads = 1076131 mem = 536887606 peak = 1171390464 [M::process] read 680328 sequences (100000119 bp) in 3.207 CPU sec, 3.312 real sec... [M::mem_process_seqs] Processed 680972 reads in 99.171 CPU sec, 3.205 real sec [M::process] read 680600 sequences (100000085 bp) in 2.175 CPU sec, 2.237 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (39, 283950, 3, 26) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (155, 282, 621) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1553) [M::mem_pestat] mean and std.dev: (264.18, 171.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2019) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (230, 367, 508) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1064) [M::mem_pestat] mean and std.dev: (376.58, 177.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1342) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (252, 310, 545) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1131) [M::mem_pestat] mean and std.dev: (367.48, 192.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1424) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 680178 sequences (100000190 bp) in 1.620 CPU sec, 1.618 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (37, 284063, 0, 40) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (172, 300, 399) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 853) [M::mem_pestat] mean and std.dev: (310.11, 141.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1080) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (228, 366, 505) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1059) [M::mem_pestat] mean and std.dev: (374.44, 175.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1336) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (243, 325, 483) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 963) [M::mem_pestat] mean and std.dev: (310.97, 99.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1203) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 680406 sequences (100000185 bp) in 1.535 CPU sec, 1.545 real sec... [M::mem_process_seqs] Processed 680328 reads in 179.665 CPU sec, 5.645 real sec sorting block 115, #reads = 1074619 mem = 536880557 peak = 1171390464 [M::mem_process_seqs] Processed 680600 reads in 116.109 CPU sec, 3.670 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (26, 283799, 1, 28) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (207, 315, 496) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1074) [M::mem_pestat] mean and std.dev: (391.88, 233.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1363) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (230, 366, 504) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1052) [M::mem_pestat] mean and std.dev: (375.02, 175.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1326) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (223, 268, 407) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 775) [M::mem_pestat] mean and std.dev: (270.40, 122.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 959) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 679618 sequences (100000079 bp) in 2.810 CPU sec, 2.871 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (38, 283535, 4, 26) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (130, 239, 309) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 667) [M::mem_pestat] mean and std.dev: (215.41, 105.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 846) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (229, 365, 503) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1051) [M::mem_pestat] mean and std.dev: (374.76, 176.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1325) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (161, 254, 324) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 650) [M::mem_pestat] mean and std.dev: (249.44, 106.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 813) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 679266 sequences (100000021 bp) in 2.150 CPU sec, 2.153 real sec... [M::mem_process_seqs] Processed 680178 reads in 173.263 CPU sec, 5.463 real sec sorting block 116, #reads = 1074708 mem = 536884772 peak = 1171390464 [M::mem_process_seqs] Processed 680406 reads in 111.305 CPU sec, 3.506 real sec sorting block 117, #reads = 1075035 mem = 536879671 peak = 1171390464 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (29, 283246, 2, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (225, 319, 360) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 630) [M::mem_pestat] mean and std.dev: (285.42, 113.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 765) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (233, 371, 510) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1064) [M::mem_pestat] mean and std.dev: (379.55, 177.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1341) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (225, 383, 612) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1386) [M::mem_pestat] mean and std.dev: (444.94, 337.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1796) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 679242 sequences (100000278 bp) in 2.681 CPU sec, 2.718 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (29, 283321, 1, 60) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (215, 246, 310) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (25, 500) [M::mem_pestat] mean and std.dev: (240.60, 65.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 595) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::process] read 679312 sequences (100000114 bp) in 2.180 CPU sec, 2.176 real sec... [M::mem_pestat] (25, 50, 75) percentile: (237, 375, 514) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1068) [M::mem_pestat] mean and std.dev: (383.18, 178.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1345) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (255, 417, 571) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1203) [M::mem_pestat] mean and std.dev: (360.06, 159.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1519) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 679618 reads in 175.009 CPU sec, 5.516 real sec [M::mem_process_seqs] Processed 679266 reads in 114.886 CPU sec, 3.626 real sec sorting block 118, #reads = 1075445 mem = 536880221 peak = 1171390464 [M::process] read 678568 sequences (100000062 bp) in 2.177 CPU sec, 2.235 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (31, 283173, 7, 58) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (187, 261, 472) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1042) [M::mem_pestat] mean and std.dev: (284.89, 129.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1327) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (237, 375, 517) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1077) [M::mem_pestat] mean and std.dev: (385.19, 181.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1357) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (304, 361, 438) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (36, 706) [M::mem_pestat] mean and std.dev: (368.24, 136.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 914) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677878 sequences (100000005 bp) in 1.630 CPU sec, 1.621 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (29, 283373, 1, 32) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (148, 211, 325) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 679) [M::mem_pestat] mean and std.dev: (248.57, 139.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 856) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (234, 372, 511) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1065) [M::mem_pestat] mean and std.dev: (380.92, 178.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1342) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (238, 413, 753) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1783) [M::mem_pestat] mean and std.dev: (346.08, 184.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2298) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 679242 reads in 170.507 CPU sec, 5.406 real sec sorting block 119, #reads = 1075504 mem = 536876227 peak = 1171390464 [M::mem_process_seqs] Processed 679312 reads in 109.691 CPU sec, 3.489 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (28, 282705, 2, 49) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (266, 301, 417) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 719) [M::mem_pestat] mean and std.dev: (304.58, 120.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 870) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (241, 381, 522) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1084) [M::mem_pestat] mean and std.dev: (389.53, 181.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1365) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (225, 362, 431) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 843) [M::mem_pestat] mean and std.dev: (345.49, 153.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1049) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677348 sequences (100000287 bp) in 2.492 CPU sec, 2.551 real sec... [M::process] read 677070 sequences (100000262 bp) in 2.150 CPU sec, 2.151 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (31, 281548, 0, 37) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (211, 303, 363) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 667) [M::mem_pestat] mean and std.dev: (272.83, 86.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 819) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (247, 387, 526) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1084) [M::mem_pestat] mean and std.dev: (394.14, 181.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1363) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (291, 385, 640) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1338) [M::mem_pestat] mean and std.dev: (417.73, 187.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1687) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 678568 reads in 170.592 CPU sec, 5.379 real sec sorting block 120, #reads = 1075962 mem = 536878872 peak = 1171390464 [M::mem_process_seqs] Processed 677878 reads in 109.670 CPU sec, 3.472 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (27, 281944, 0, 45) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (233, 373, 389) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 701) [M::mem_pestat] mean and std.dev: (309.00, 114.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 857) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (251, 394, 535) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1103) [M::mem_pestat] mean and std.dev: (400.40, 183.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1387) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (226, 301, 420) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 808) [M::mem_pestat] mean and std.dev: (300.80, 123.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1002) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677076 sequences (100000293 bp) in 2.751 CPU sec, 2.799 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (34, 282257, 3, 45) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (167, 363, 5142) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 15092) [M::mem_pestat] mean and std.dev: (1636.76, 2186.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 20067) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (253, 396, 535) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1099) [M::mem_pestat] mean and std.dev: (401.47, 183.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1381) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (239, 329, 528) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1106) [M::mem_pestat] mean and std.dev: (372.82, 157.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1395) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677026 sequences (100000161 bp) in 2.150 CPU sec, 2.146 real sec... [M::mem_process_seqs] Processed 677348 reads in 171.819 CPU sec, 5.416 real sec sorting block 121, #reads = 1074441 mem = 536880906 peak = 1171390464 [M::mem_process_seqs] Processed 677070 reads in 111.170 CPU sec, 3.510 real sec sorting block 122, #reads = 1075859 mem = 536879436 peak = 1171390464 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (41, 282065, 7, 45) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (201, 312, 393) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 777) [M::mem_pestat] mean and std.dev: (289.67, 119.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 969) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (253, 396, 537) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1105) [M::mem_pestat] mean and std.dev: (402.74, 184.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1389) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (245, 372, 459) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 887) [M::mem_pestat] mean and std.dev: (338.59, 130.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1101) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677084 sequences (100000252 bp) in 2.719 CPU sec, 2.755 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (24, 282027, 5, 48) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (275, 423, 558) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1124) [M::mem_pestat] mean and std.dev: (354.52, 132.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1407) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (251, 395, 540) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1118) [M::mem_pestat] mean and std.dev: (403.69, 187.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1407) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (203, 317, 415) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 839) [M::mem_pestat] mean and std.dev: (324.38, 176.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1051) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677144 sequences (100000232 bp) in 2.190 CPU sec, 2.190 real sec... [M::mem_process_seqs] Processed 677076 reads in 172.544 CPU sec, 5.435 real sec [M::mem_process_seqs] Processed 677026 reads in 110.443 CPU sec, 3.484 real sec sorting block 123, #reads = 1074912 mem = 536877673 peak = 1171390464 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (40, 282244, 2, 41) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (191, 267, 555) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1283) [M::mem_pestat] mean and std.dev: (279.26, 149.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1647) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (251, 396, 543) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1127) [M::mem_pestat] mean and std.dev: (405.38, 189.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1419) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (234, 322, 440) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 852) [M::mem_pestat] mean and std.dev: (328.26, 145.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1058) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677152 sequences (100000027 bp) in 2.805 CPU sec, 2.860 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (33, 282608, 2, 29) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (241, 387, 552) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1174) [M::mem_pestat] mean and std.dev: (378.30, 193.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1485) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (251, 394, 539) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1115) [M::mem_pestat] mean and std.dev: (403.35, 187.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1403) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (280, 469, 554) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1102) [M::mem_pestat] mean and std.dev: (448.79, 208.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1376) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677776 sequences (100000161 bp) in 2.200 CPU sec, 2.192 real sec... [M::mem_process_seqs] Processed 677084 reads in 173.928 CPU sec, 5.480 real sec [M::mem_process_seqs] Processed 677144 reads in 112.509 CPU sec, 3.548 real sec sorting block 124, #reads = 1075999 mem = 536879349 peak = 1171390464 [M::process] read 677526 sequences (100000196 bp) in 2.357 CPU sec, 2.415 real sec... [M::process] read 683728 sequences (100000085 bp) in 1.690 CPU sec, 1.686 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (63, 283168, 3, 31) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (217, 430, 580) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1306) [M::mem_pestat] mean and std.dev: (418.22, 216.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1669) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (244, 387, 539) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1129) [M::mem_pestat] mean and std.dev: (401.76, 193.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1424) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (235, 352, 455) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 895) [M::mem_pestat] mean and std.dev: (298.72, 100.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1115) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 677776 reads in 95.917 CPU sec, 3.042 real sec sorting block 125, #reads = 1075550 mem = 536878832 peak = 1171390464 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (52, 282315, 3, 33) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (224, 377, 662) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1538) [M::mem_pestat] mean and std.dev: (356.50, 206.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1976) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (249, 393, 541) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1125) [M::mem_pestat] mean and std.dev: (404.73, 191.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1417) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (267, 476, 584) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1218) [M::mem_pestat] mean and std.dev: (443.75, 196.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1535) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (37, 282690, 0, 41) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (195, 215, 448) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 954) [M::mem_pestat] mean and std.dev: (246.61, 146.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1207) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (247, 391, 540) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1126) [M::mem_pestat] mean and std.dev: (403.36, 192.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1419) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (200, 264, 345) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 635) [M::mem_pestat] mean and std.dev: (273.21, 90.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 780) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 683808 sequences (100000261 bp) in 2.152 CPU sec, 2.156 real sec... [M::mem_process_seqs] Processed 677152 reads in 274.911 CPU sec, 8.703 real sec sorting block 126, #reads = 1074652 mem = 536879920 peak = 1171390464 [M::mem_process_seqs] Processed 677526 reads in 139.426 CPU sec, 4.434 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (39, 284658, 3, 36) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (171, 220, 345) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 693) [M::mem_pestat] mean and std.dev: (243.49, 89.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 867) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (210, 338, 483) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1029) [M::mem_pestat] mean and std.dev: (357.18, 177.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1302) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (242, 357, 536) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1124) [M::mem_pestat] mean and std.dev: (368.00, 152.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1418) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 683482 sequences (100000005 bp) in 2.770 CPU sec, 2.879 real sec... [M::process] read 682214 sequences (100000183 bp) in 1.610 CPU sec, 1.606 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (22, 284600, 1, 44) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (210, 284, 341) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 603) [M::mem_pestat] mean and std.dev: (272.10, 101.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 734) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (210, 337, 482) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1026) [M::mem_pestat] mean and std.dev: (355.95, 176.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1298) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (242, 369, 545) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1151) [M::mem_pestat] mean and std.dev: (364.56, 202.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1454) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 683728 reads in 179.563 CPU sec, 5.685 real sec sorting block 127, #reads = 1068040 mem = 536879130 peak = 1171390464 [M::mem_process_seqs] Processed 683808 reads in 199.036 CPU sec, 6.320 real sec [M::process] read 681480 sequences (100000194 bp) in 2.556 CPU sec, 2.624 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (30, 284351, 2, 31) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (137, 197, 371) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 839) [M::mem_pestat] mean and std.dev: (216.12, 110.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1073) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (219, 351, 493) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1041) [M::mem_pestat] mean and std.dev: (366.52, 178.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1315) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (237, 286, 343) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (25, 555) [M::mem_pestat] mean and std.dev: (267.71, 82.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 661) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 680946 sequences (100000280 bp) in 1.620 CPU sec, 1.626 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (36, 284490, 3, 36) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (190, 290, 364) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 712) [M::mem_pestat] mean and std.dev: (269.58, 122.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 886) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (212, 339, 485) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1031) [M::mem_pestat] mean and std.dev: (357.67, 176.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1304) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (267, 368, 595) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1251) [M::mem_pestat] mean and std.dev: (365.53, 177.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1579) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 682214 reads in 184.475 CPU sec, 5.847 real sec sorting block 128, #reads = 1079710 mem = 536877861 peak = 1171390464 [M::mem_process_seqs] Processed 683482 reads in 204.058 CPU sec, 6.484 real sec sorting block 129, #reads = 1079460 mem = 536876154 peak = 1173188608 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (40, 283745, 5, 49) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (250, 322, 455) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 865) [M::mem_pestat] mean and std.dev: (340.95, 142.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1070) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (223, 356, 499) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1051) [M::mem_pestat] mean and std.dev: (370.30, 179.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1327) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (228, 371, 565) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1239) [M::mem_pestat] mean and std.dev: (334.19, 135.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1576) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 680552 sequences (100000206 bp) in 2.852 CPU sec, 2.900 real sec... [M::process] read 680408 sequences (100000095 bp) in 2.280 CPU sec, 2.277 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (27, 282919, 9, 33) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (208, 284, 407) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 805) [M::mem_pestat] mean and std.dev: (305.88, 122.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1004) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (226, 361, 503) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1057) [M::mem_pestat] mean and std.dev: (374.31, 179.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1334) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (208, 352, 486) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1042) [M::mem_pestat] mean and std.dev: (320.13, 125.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1320) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 681480 reads in 185.460 CPU sec, 5.849 real sec [M::mem_process_seqs] Processed 680946 reads in 118.587 CPU sec, 3.749 real sec sorting block 130, #reads = 1079479 mem = 536878252 peak = 1173188608 [M::process] read 680006 sequences (100000045 bp) in 2.120 CPU sec, 2.200 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (19, 282990, 4, 44) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (190, 279, 323) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 589) [M::mem_pestat] mean and std.dev: (230.59, 69.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 722) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (226, 362, 506) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1066) [M::mem_pestat] mean and std.dev: (375.58, 180.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1346) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (229, 408, 578) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1276) [M::mem_pestat] mean and std.dev: (420.24, 275.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1625) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 679718 sequences (100000129 bp) in 1.650 CPU sec, 1.650 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (26, 282913, 5, 33) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (137, 251, 410) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 956) [M::mem_pestat] mean and std.dev: (276.72, 172.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1229) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (231, 369, 510) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1068) [M::mem_pestat] mean and std.dev: (380.24, 180.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1347) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (176, 339, 455) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1013) [M::mem_pestat] mean and std.dev: (269.08, 114.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1292) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (40, 283206, 6, 59) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (162, 340, 599) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1473) [M::mem_pestat] mean and std.dev: (309.08, 182.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1910) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (229, 365, 508) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1066) [M::mem_pestat] mean and std.dev: (377.58, 180.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1345) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (212, 266, 447) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 917) [M::mem_pestat] mean and std.dev: (353.32, 191.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1152) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 680552 reads in 259.462 CPU sec, 8.284 real sec sorting block 131, #reads = 1080433 mem = 536878020 peak = 1173188608 [M::mem_process_seqs] Processed 680006 reads in 194.592 CPU sec, 6.226 real sec [M::mem_process_seqs] Processed 680408 reads in 212.323 CPU sec, 6.800 real sec sorting block 132, #reads = 1078908 mem = 536880115 peak = 1173188608 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (30, 283112, 2, 32) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (163, 231, 457) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1045) [M::mem_pestat] mean and std.dev: (303.28, 185.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1339) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (234, 372, 515) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1077) [M::mem_pestat] mean and std.dev: (383.35, 181.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1358) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (207, 271, 516) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1134) [M::mem_pestat] mean and std.dev: (282.46, 171.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1443) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 679622 sequences (100000087 bp) in 3.165 CPU sec, 3.304 real sec... [M::mem_process_seqs] Processed 679718 reads in 101.934 CPU sec, 3.323 real sec sorting block 133, #reads = 1079237 mem = 536878237 peak = 1173188608 [M::process] read 679360 sequences (100000133 bp) in 2.488 CPU sec, 2.589 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (30, 283171, 1, 46) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (213, 340, 1049) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2721) [M::mem_pestat] mean and std.dev: (381.12, 307.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3557) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (235, 374, 516) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1078) [M::mem_pestat] mean and std.dev: (384.30, 181.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1359) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (172, 258, 378) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 790) [M::mem_pestat] mean and std.dev: (232.66, 91.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 996) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 679166 sequences (100000091 bp) in 2.140 CPU sec, 2.136 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (38, 282846, 1, 23) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (230, 326, 392) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 716) [M::mem_pestat] mean and std.dev: (304.63, 124.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 878) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (236, 374, 514) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1070) [M::mem_pestat] mean and std.dev: (383.67, 180.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1348) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (209, 312, 594) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1364) [M::mem_pestat] mean and std.dev: (372.00, 177.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1749) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 679622 reads in 187.404 CPU sec, 5.872 real sec [M::process] read 679182 sequences (100000186 bp) in 2.261 CPU sec, 2.278 real sec... [M::mem_process_seqs] Processed 679360 reads in 122.247 CPU sec, 3.830 real sec sorting block 134, #reads = 1077997 mem = 536878982 peak = 1173188608 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (23, 282484, 2, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (199, 308, 382) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 748) [M::mem_pestat] mean and std.dev: (282.00, 103.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 931) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (237, 378, 519) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1083) [M::mem_pestat] mean and std.dev: (387.36, 182.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1365) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (229, 349, 387) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 703) [M::mem_pestat] mean and std.dev: (310.79, 110.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 861) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 679132 sequences (100000130 bp) in 2.806 CPU sec, 2.883 real sec... [M::process] read 678730 sequences (100000257 bp) in 1.560 CPU sec, 1.568 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (33, 282894, 3, 25) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (175, 286, 547) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1291) [M::mem_pestat] mean and std.dev: (300.07, 160.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1663) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (236, 376, 519) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1085) [M::mem_pestat] mean and std.dev: (385.87, 181.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1368) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (167, 213, 305) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 581) [M::mem_pestat] mean and std.dev: (220.57, 82.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 719) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 679166 reads in 190.086 CPU sec, 6.031 real sec [M::mem_process_seqs] Processed 679182 reads in 122.526 CPU sec, 3.894 real sec sorting block 135, #reads = 1078209 mem = 536879073 peak = 1173188608 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (33, 282829, 0, 37) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (212, 296, 718) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1730) [M::mem_pestat] mean and std.dev: (361.17, 249.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2236) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (238, 379, 521) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1087) [M::mem_pestat] mean and std.dev: (388.18, 182.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1370) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (265, 385, 582) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1216) [M::mem_pestat] mean and std.dev: (382.03, 179.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1533) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 678538 sequences (100000024 bp) in 2.825 CPU sec, 2.887 real sec... [M::process] read 678462 sequences (100000120 bp) in 2.190 CPU sec, 2.187 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (42, 282529, 0, 31) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (163, 317, 567) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1375) [M::mem_pestat] mean and std.dev: (314.06, 191.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1779) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (241, 383, 525) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1093) [M::mem_pestat] mean and std.dev: (391.23, 182.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1377) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (201, 276, 374) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 720) [M::mem_pestat] mean and std.dev: (219.83, 89.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 893) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 679132 reads in 189.062 CPU sec, 5.972 real sec sorting block 136, #reads = 1077432 mem = 536877498 peak = 1173188608 [M::mem_process_seqs] Processed 678730 reads in 122.599 CPU sec, 3.883 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (35, 282784, 2, 35) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (200, 247, 327) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 581) [M::mem_pestat] mean and std.dev: (239.45, 85.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 708) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (243, 386, 527) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1095) [M::mem_pestat] mean and std.dev: (393.47, 183.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1379) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (215, 307, 491) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1043) [M::mem_pestat] mean and std.dev: (343.50, 174.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1319) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 678236 sequences (100000054 bp) in 2.831 CPU sec, 2.883 real sec... [M::process] read 678160 sequences (100000030 bp) in 2.200 CPU sec, 2.198 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (54, 282125, 4, 42) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (187, 241, 260) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (41, 406) [M::mem_pestat] mean and std.dev: (225.57, 63.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 481) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (243, 387, 530) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1104) [M::mem_pestat] mean and std.dev: (395.09, 184.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1391) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (203, 342, 450) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 944) [M::mem_pestat] mean and std.dev: (339.35, 183.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1191) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 678538 reads in 186.864 CPU sec, 5.897 real sec sorting block 137, #reads = 1076885 mem = 536879858 peak = 1173188608 [M::mem_process_seqs] Processed 678462 reads in 121.982 CPU sec, 3.864 real sec sorting block 138, #reads = 1076985 mem = 536880555 peak = 1173188608 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (35, 282617, 2, 39) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (186, 255, 619) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1485) [M::mem_pestat] mean and std.dev: (338.30, 236.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1918) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (244, 385, 528) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1096) [M::mem_pestat] mean and std.dev: (394.01, 183.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1380) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (228, 410, 542) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1170) [M::mem_pestat] mean and std.dev: (374.50, 170.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1484) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 678252 sequences (100000155 bp) in 2.817 CPU sec, 2.873 real sec... [M::process] read 678222 sequences (100000194 bp) in 2.230 CPU sec, 2.223 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (37, 282326, 1, 46) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (229, 319, 375) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 667) [M::mem_pestat] mean and std.dev: (291.50, 113.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 813) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (244, 385, 527) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1093) [M::mem_pestat] mean and std.dev: (393.35, 182.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1376) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (216, 345, 502) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1074) [M::mem_pestat] mean and std.dev: (335.35, 184.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1360) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 678236 reads in 189.858 CPU sec, 5.994 real sec [M::mem_process_seqs] Processed 678160 reads in 122.574 CPU sec, 3.883 real sec sorting block 139, #reads = 1076374 mem = 536880024 peak = 1173188608 [M::process] read 677886 sequences (100000208 bp) in 2.388 CPU sec, 2.441 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (45, 283240, 3, 33) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (196, 255, 445) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 943) [M::mem_pestat] mean and std.dev: (301.50, 160.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1192) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (244, 383, 522) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1078) [M::mem_pestat] mean and std.dev: (390.88, 180.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1356) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (228, 413, 691) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1617) [M::mem_pestat] mean and std.dev: (457.55, 296.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2080) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 678222 sequences (100000124 bp) in 2.310 CPU sec, 2.313 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (30, 282654, 3, 38) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (200, 216, 505) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1115) [M::mem_pestat] mean and std.dev: (302.81, 202.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1420) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (243, 380, 517) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1065) [M::mem_pestat] mean and std.dev: (387.89, 178.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1339) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (152, 318, 424) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 968) [M::mem_pestat] mean and std.dev: (299.66, 164.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1240) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 678252 reads in 184.081 CPU sec, 5.818 real sec [M::mem_process_seqs] Processed 678222 reads in 124.269 CPU sec, 3.944 real sec sorting block 140, #reads = 1076957 mem = 536877000 peak = 1173188608 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (43, 282798, 3, 30) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (206, 310, 584) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1340) [M::mem_pestat] mean and std.dev: (328.63, 273.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1718) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (244, 381, 519) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1069) [M::mem_pestat] mean and std.dev: (389.81, 179.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1344) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (288, 331, 448) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 768) [M::mem_pestat] mean and std.dev: (349.63, 120.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 928) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 678226 sequences (100000290 bp) in 2.863 CPU sec, 2.913 real sec... [M::process] read 678216 sequences (100000282 bp) in 2.350 CPU sec, 2.357 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (50, 283219, 0, 31) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (143, 288, 394) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 896) [M::mem_pestat] mean and std.dev: (274.25, 147.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1147) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (243, 380, 518) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1068) [M::mem_pestat] mean and std.dev: (388.30, 179.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1343) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (201, 351, 435) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 903) [M::mem_pestat] mean and std.dev: (323.53, 136.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1137) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 677886 reads in 193.591 CPU sec, 6.111 real sec sorting block 141, #reads = 1076003 mem = 536877728 peak = 1173188608 [M::mem_process_seqs] Processed 678222 reads in 127.679 CPU sec, 4.034 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (49, 282661, 1, 36) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (136, 352, 429) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1015) [M::mem_pestat] mean and std.dev: (281.07, 156.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1308) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (241, 378, 519) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1075) [M::mem_pestat] mean and std.dev: (387.68, 179.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1353) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (232, 273, 520) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1096) [M::mem_pestat] mean and std.dev: (305.20, 169.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1384) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 678234 sequences (100000259 bp) in 2.882 CPU sec, 2.934 real sec... [M::process] read 678194 sequences (100000089 bp) in 2.340 CPU sec, 2.343 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (29, 282322, 4, 25) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (145, 197, 415) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 955) [M::mem_pestat] mean and std.dev: (242.15, 149.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1225) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (240, 377, 518) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1074) [M::mem_pestat] mean and std.dev: (387.47, 180.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1352) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (244, 330, 522) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1078) [M::mem_pestat] mean and std.dev: (374.12, 213.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1356) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 678226 reads in 195.111 CPU sec, 6.160 real sec sorting block 142, #reads = 1075870 mem = 536881568 peak = 1173188608 [M::mem_process_seqs] Processed 678216 reads in 128.942 CPU sec, 4.086 real sec sorting block 143, #reads = 1074031 mem = 536880041 peak = 1173188608 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (40, 283030, 1, 35) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (331, 451, 602) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1144) [M::mem_pestat] mean and std.dev: (432.84, 166.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1415) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (242, 381, 524) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1088) [M::mem_pestat] mean and std.dev: (391.09, 182.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1370) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (219, 325, 472) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 978) [M::mem_pestat] mean and std.dev: (353.55, 187.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1231) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 678114 sequences (100000001 bp) in 2.869 CPU sec, 2.918 real sec... [M::process] read 678152 sequences (100000286 bp) in 2.280 CPU sec, 2.281 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (25, 282867, 3, 23) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (200, 246, 354) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 662) [M::mem_pestat] mean and std.dev: (259.57, 125.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 816) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (242, 380, 523) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1085) [M::mem_pestat] mean and std.dev: (391.04, 183.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1366) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (239, 248, 447) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 863) [M::mem_pestat] mean and std.dev: (267.78, 83.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1071) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 678234 reads in 190.993 CPU sec, 6.028 real sec [M::mem_process_seqs] Processed 678194 reads in 126.330 CPU sec, 4.000 real sec sorting block 144, #reads = 1075464 mem = 536881521 peak = 1173188608 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (32, 283078, 2, 43) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (242, 560, 5358) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 15590) [M::mem_pestat] mean and std.dev: (2393.69, 2506.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 20706) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (242, 382, 524) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1088) [M::mem_pestat] mean and std.dev: (392.92, 185.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1370) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (177, 292, 368) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 750) [M::mem_pestat] mean and std.dev: (287.67, 156.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 941) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 678042 sequences (100000061 bp) in 2.741 CPU sec, 2.775 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (32, 283215, 2, 45) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (137, 195, 324) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 698) [M::mem_pestat] mean and std.dev: (214.33, 116.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 885) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::process] read 678980 sequences (100000206 bp) in 2.340 CPU sec, 2.341 real sec... [M::mem_pestat] (25, 50, 75) percentile: (243, 382, 527) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1095) [M::mem_pestat] mean and std.dev: (394.41, 186.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1379) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (244, 342, 421) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 775) [M::mem_pestat] mean and std.dev: (347.18, 137.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 952) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 678114 reads in 191.306 CPU sec, 6.042 real sec [M::mem_process_seqs] Processed 678152 reads in 125.468 CPU sec, 3.965 real sec sorting block 145, #reads = 1074266 mem = 536879018 peak = 1173188608 [M::process] read 688572 sequences (100000016 bp) in 2.725 CPU sec, 2.763 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (24, 282912, 0, 48) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (252, 399, 429) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 783) [M::mem_pestat] mean and std.dev: (327.30, 91.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 960) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (242, 383, 530) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1106) [M::mem_pestat] mean and std.dev: (395.29, 187.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1394) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (219, 308, 448) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 906) [M::mem_pestat] mean and std.dev: (315.84, 130.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1135) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 687346 sequences (100000233 bp) in 2.350 CPU sec, 2.349 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (47, 283470, 4, 33) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (258, 407, 495) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 969) [M::mem_pestat] mean and std.dev: (336.73, 157.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1206) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (237, 378, 527) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1107) [M::mem_pestat] mean and std.dev: (392.40, 190.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1397) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (229, 301, 485) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 997) [M::mem_pestat] mean and std.dev: (334.16, 139.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1253) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (29, 287104, 2, 37) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (162, 224, 341) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 699) [M::mem_pestat] mean and std.dev: (239.28, 92.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 878) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (192, 305, 447) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 957) [M::mem_pestat] mean and std.dev: (329.25, 166.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1212) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (204, 289, 582) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1338) [M::mem_pestat] mean and std.dev: (384.34, 306.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1716) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 678042 reads in 300.518 CPU sec, 9.781 real sec sorting block 146, #reads = 1073189 mem = 536881638 peak = 1173188608 [M::mem_process_seqs] Processed 678980 reads in 234.469 CPU sec, 7.492 real sec [M::mem_process_seqs] Processed 688572 reads in 258.806 CPU sec, 8.265 real sec sorting block 147, #reads = 1065754 mem = 536881134 peak = 1173188608 [M::process] read 686924 sequences (100000015 bp) in 3.550 CPU sec, 3.753 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (42, 286765, 4, 38) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (249, 324, 1324) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3474) [M::mem_pestat] mean and std.dev: (576.00, 541.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4549) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (196, 314, 457) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 979) [M::mem_pestat] mean and std.dev: (336.35, 169.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1240) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (167, 294, 419) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 923) [M::mem_pestat] mean and std.dev: (280.44, 135.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1175) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 685068 sequences (100000128 bp) in 2.730 CPU sec, 2.758 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (26, 286231, 1, 28) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (170, 265, 387) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 821) [M::mem_pestat] mean and std.dev: (265.88, 105.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1038) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (197, 317, 458) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 980) [M::mem_pestat] mean and std.dev: (337.39, 168.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1241) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (190, 276, 342) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 646) [M::mem_pestat] mean and std.dev: (263.00, 121.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 798) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 687346 reads in 206.473 CPU sec, 6.544 real sec [M::mem_process_seqs] Processed 686924 reads in 139.415 CPU sec, 4.384 real sec sorting block 148, #reads = 1077774 mem = 536877421 peak = 1173188608 [M::process] read 683946 sequences (100000284 bp) in 2.716 CPU sec, 2.764 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (19, 285835, 1, 29) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (157, 201, 280) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 526) [M::mem_pestat] mean and std.dev: (220.26, 107.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 651) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (205, 329, 469) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 997) [M::mem_pestat] mean and std.dev: (347.04, 170.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1261) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (219, 299, 463) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 951) [M::mem_pestat] mean and std.dev: (333.32, 160.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1195) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 683046 sequences (100000040 bp) in 2.581 CPU sec, 2.625 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (28, 285500, 4, 40) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (174, 247, 431) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 945) [M::mem_pestat] mean and std.dev: (292.86, 163.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1202) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (210, 338, 478) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1014) [M::mem_pestat] mean and std.dev: (353.74, 172.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1282) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (210, 336, 461) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 963) [M::mem_pestat] mean and std.dev: (340.11, 210.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1214) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 682316 sequences (100000126 bp) in 2.110 CPU sec, 2.108 real sec... [M::mem_process_seqs] Processed 685068 reads in 197.440 CPU sec, 6.227 real sec sorting block 149, #reads = 1074640 mem = 536880740 peak = 1173188608 [M::mem_process_seqs] Processed 683946 reads in 128.607 CPU sec, 4.061 real sec sorting block 150, #reads = 1075581 mem = 536878788 peak = 1173188608 [M::process] read 681634 sequences (100000269 bp) in 2.188 CPU sec, 2.249 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (39, 285047, 0, 34) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (304, 367, 622) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1258) [M::mem_pestat] mean and std.dev: (404.71, 170.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1576) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (214, 343, 483) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1021) [M::mem_pestat] mean and std.dev: (357.65, 173.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1290) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (204, 275, 396) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 780) [M::mem_pestat] mean and std.dev: (286.56, 116.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 972) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 681006 sequences (100000163 bp) in 1.690 CPU sec, 1.687 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (31, 284562, 1, 50) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (215, 250, 299) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (47, 467) [M::mem_pestat] mean and std.dev: (246.00, 64.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 551) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (223, 356, 496) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1042) [M::mem_pestat] mean and std.dev: (368.11, 175.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1315) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (203, 233, 401) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 797) [M::mem_pestat] mean and std.dev: (315.61, 174.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1013) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (23, 284372, 1, 45) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (158, 207, 487) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1145) [M::mem_pestat] mean and std.dev: (294.55, 222.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1474) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (219, 350, 490) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1032) [M::mem_pestat] mean and std.dev: (363.21, 174.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1303) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (206, 319, 457) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 959) [M::mem_pestat] mean and std.dev: (337.30, 184.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1210) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 683046 reads in 271.570 CPU sec, 8.667 real sec [M::mem_process_seqs] Processed 681634 reads in 204.816 CPU sec, 6.563 real sec [M::mem_process_seqs] Processed 682316 reads in 226.272 CPU sec, 7.259 real sec sorting block 151, #reads = 1075505 mem = 536877815 peak = 1173188608 [M::process] read 680752 sequences (100000096 bp) in 2.684 CPU sec, 2.797 real sec... sorting block 152, #reads = 1075848 mem = 536877376 peak = 1173188608 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (14, 284078, 1, 42) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (125, 166, 201) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 353) [M::mem_pestat] mean and std.dev: (141.09, 38.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 429) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (225, 360, 498) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1044) [M::mem_pestat] mean and std.dev: (370.58, 175.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1317) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (221, 359, 572) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1274) [M::mem_pestat] mean and std.dev: (371.55, 209.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1625) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 679888 sequences (100000064 bp) in 2.332 CPU sec, 2.351 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (34, 284208, 4, 39) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (202, 269, 429) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 883) [M::mem_pestat] mean and std.dev: (305.72, 167.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1110) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (228, 363, 502) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1050) [M::mem_pestat] mean and std.dev: (373.85, 176.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1324) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (175, 215, 359) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 727) [M::mem_pestat] mean and std.dev: (241.24, 103.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 911) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 681006 reads in 193.678 CPU sec, 6.135 real sec [M::mem_process_seqs] Processed 680752 reads in 125.473 CPU sec, 3.935 real sec [M::process] read 680016 sequences (100000283 bp) in 2.509 CPU sec, 2.550 real sec... sorting block 153, #reads = 1074833 mem = 536886452 peak = 1173188608 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (29, 283883, 2, 47) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (198, 393, 452) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 960) [M::mem_pestat] mean and std.dev: (317.08, 143.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1214) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (233, 371, 510) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1064) [M::mem_pestat] mean and std.dev: (380.44, 178.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1341) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (291, 520, 797) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1809) [M::mem_pestat] mean and std.dev: (454.84, 277.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2315) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 679850 sequences (100000191 bp) in 2.925 CPU sec, 3.036 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (45, 284499, 0, 31) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (269, 375, 411) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 695) [M::mem_pestat] mean and std.dev: (332.86, 116.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 837) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (233, 371, 512) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1070) [M::mem_pestat] mean and std.dev: (380.86, 179.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1349) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (226, 345, 480) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 988) [M::mem_pestat] mean and std.dev: (347.27, 156.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1242) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 679832 sequences (100000063 bp) in 2.180 CPU sec, 2.180 real sec... [M::mem_process_seqs] Processed 679888 reads in 199.880 CPU sec, 6.327 real sec [M::mem_process_seqs] Processed 680016 reads in 129.142 CPU sec, 4.083 real sec sorting block 154, #reads = 1073515 mem = 536879662 peak = 1173188608 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (28, 283403, 1, 37) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (216, 381, 562) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1254) [M::mem_pestat] mean and std.dev: (416.41, 257.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1600) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (234, 374, 516) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1080) [M::mem_pestat] mean and std.dev: (383.02, 180.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1362) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (215, 242, 544) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1202) [M::mem_pestat] mean and std.dev: (308.59, 167.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1531) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 679300 sequences (100000211 bp) in 2.770 CPU sec, 2.887 real sec... [M::process] read 679414 sequences (100000253 bp) in 2.220 CPU sec, 2.221 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (43, 284232, 3, 43) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (136, 259, 390) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 898) [M::mem_pestat] mean and std.dev: (289.59, 180.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1152) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (234, 375, 518) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1086) [M::mem_pestat] mean and std.dev: (384.45, 181.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1370) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (251, 328, 577) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1229) [M::mem_pestat] mean and std.dev: (423.03, 286.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1568) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 679850 reads in 199.696 CPU sec, 6.318 real sec sorting block 155, #reads = 1074857 mem = 536880344 peak = 1173188608 [M::mem_process_seqs] Processed 679832 reads in 135.703 CPU sec, 4.308 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (36, 283688, 1, 45) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (219, 369, 463) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 951) [M::mem_pestat] mean and std.dev: (327.59, 139.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1195) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (236, 373, 515) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1073) [M::mem_pestat] mean and std.dev: (383.59, 180.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1352) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (246, 448, 671) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1521) [M::mem_pestat] mean and std.dev: (388.08, 185.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1946) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 679000 sequences (100000074 bp) in 2.629 CPU sec, 2.681 real sec... [M::process] read 679064 sequences (100000072 bp) in 2.210 CPU sec, 2.210 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (44, 283306, 0, 39) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (163, 382, 445) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1009) [M::mem_pestat] mean and std.dev: (329.84, 160.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1291) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (235, 371, 513) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1069) [M::mem_pestat] mean and std.dev: (382.11, 179.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1347) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (285, 419, 606) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1248) [M::mem_pestat] mean and std.dev: (448.42, 233.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1569) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 679300 reads in 190.765 CPU sec, 6.037 real sec sorting block 156, #reads = 1074841 mem = 536886269 peak = 1173188608 [M::mem_process_seqs] Processed 679414 reads in 123.191 CPU sec, 3.894 real sec sorting block 157, #reads = 1074236 mem = 536880091 peak = 1173188608 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (49, 283100, 3, 38) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (230, 295, 412) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 776) [M::mem_pestat] mean and std.dev: (262.27, 83.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 958) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (237, 377, 521) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1089) [M::mem_pestat] mean and std.dev: (387.94, 182.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1373) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (243, 338, 394) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 696) [M::mem_pestat] mean and std.dev: (311.39, 103.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 847) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 679274 sequences (100000224 bp) in 2.562 CPU sec, 2.602 real sec... [M::process] read 679092 sequences (100000015 bp) in 2.230 CPU sec, 2.230 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (38, 283241, 1, 46) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (149, 230, 315) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 647) [M::mem_pestat] mean and std.dev: (200.50, 77.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 813) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (236, 376, 520) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1088) [M::mem_pestat] mean and std.dev: (386.44, 182.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1372) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (204, 302, 393) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 771) [M::mem_pestat] mean and std.dev: (260.68, 97.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 960) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 679000 reads in 195.787 CPU sec, 6.195 real sec [M::mem_process_seqs] Processed 679064 reads in 126.255 CPU sec, 3.999 real sec sorting block 158, #reads = 1074744 mem = 536880424 peak = 1173188608 [M::process] read 678512 sequences (100000075 bp) in 2.351 CPU sec, 2.406 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (56, 283212, 1, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (287, 450, 670) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1436) [M::mem_pestat] mean and std.dev: (369.09, 153.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1819) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (236, 374, 520) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1088) [M::mem_pestat] mean and std.dev: (386.37, 183.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1372) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (230, 368, 488) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1004) [M::mem_pestat] mean and std.dev: (356.71, 157.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1262) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 678548 sequences (100000299 bp) in 1.890 CPU sec, 1.890 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (38, 282894, 4, 44) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (176, 254, 351) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 701) [M::mem_pestat] mean and std.dev: (294.34, 148.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 886) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (241, 382, 529) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1105) [M::mem_pestat] mean and std.dev: (393.37, 185.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1393) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (266, 441, 798) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1862) [M::mem_pestat] mean and std.dev: (439.68, 216.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2394) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (24, 283364, 1, 41) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (230, 302, 679) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1577) [M::mem_pestat] mean and std.dev: (349.95, 227.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2026) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (236, 376, 522) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1094) [M::mem_pestat] mean and std.dev: (387.66, 183.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1380) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (211, 305, 353) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 637) [M::mem_pestat] mean and std.dev: (297.21, 116.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 779) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 679274 reads in 276.710 CPU sec, 9.021 real sec sorting block 159, #reads = 1074727 mem = 536878666 peak = 1173188608 [M::mem_process_seqs] Processed 678512 reads in 207.478 CPU sec, 6.646 real sec [M::mem_process_seqs] Processed 679092 reads in 228.527 CPU sec, 7.330 real sec sorting block 160, #reads = 1075783 mem = 536877170 peak = 1173188608 [M::process] read 678448 sequences (100000143 bp) in 2.970 CPU sec, 3.089 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (27, 282835, 0, 26) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (169, 288, 392) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 838) [M::mem_pestat] mean and std.dev: (298.62, 152.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1061) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (240, 379, 523) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1089) [M::mem_pestat] mean and std.dev: (390.59, 184.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1372) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (222, 345, 437) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 867) [M::mem_pestat] mean and std.dev: (306.05, 135.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1082) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 678310 sequences (100000287 bp) in 2.349 CPU sec, 2.357 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (25, 282453, 3, 48) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (187, 313, 477) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1057) [M::mem_pestat] mean and std.dev: (343.70, 204.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1347) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (240, 378, 521) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1083) [M::mem_pestat] mean and std.dev: (389.56, 183.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1364) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (210, 313, 408) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 804) [M::mem_pestat] mean and std.dev: (306.45, 118.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1002) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 678548 reads in 188.264 CPU sec, 5.963 real sec [M::mem_process_seqs] Processed 678448 reads in 122.667 CPU sec, 3.855 real sec sorting block 161, #reads = 1076357 mem = 536877257 peak = 1173188608 [M::process] read 677872 sequences (100000188 bp) in 2.590 CPU sec, 2.660 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (29, 281881, 1, 33) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (164, 238, 578) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1406) [M::mem_pestat] mean and std.dev: (338.93, 244.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1820) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (241, 381, 525) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1093) [M::mem_pestat] mean and std.dev: (392.84, 185.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1377) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (171, 353, 453) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1017) [M::mem_pestat] mean and std.dev: (288.46, 127.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1299) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677758 sequences (100000130 bp) in 2.592 CPU sec, 2.640 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (34, 283043, 6, 27) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (277, 417, 469) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 853) [M::mem_pestat] mean and std.dev: (374.64, 145.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1045) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (244, 383, 530) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1102) [M::mem_pestat] mean and std.dev: (396.02, 187.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1388) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (203, 290, 346) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 632) [M::mem_pestat] mean and std.dev: (288.04, 124.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 785) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677482 sequences (100000238 bp) in 2.064 CPU sec, 2.067 real sec... [M::mem_process_seqs] Processed 678310 reads in 189.888 CPU sec, 6.001 real sec sorting block 162, #reads = 1075927 mem = 536879203 peak = 1173188608 [M::mem_process_seqs] Processed 677872 reads in 123.904 CPU sec, 3.909 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (27, 282666, 1, 33) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (268, 357, 5123) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 14833) [M::mem_pestat] mean and std.dev: (1688.33, 2166.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 19688) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (245, 387, 535) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1115) [M::mem_pestat] mean and std.dev: (399.24, 189.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1405) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (204, 347, 577) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1323) [M::mem_pestat] mean and std.dev: (387.59, 181.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1696) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 677502 sequences (100000093 bp) in 2.803 CPU sec, 2.870 real sec... [M::process] read 677514 sequences (100000236 bp) in 2.180 CPU sec, 2.185 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (42, 282630, 4, 36) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (147, 282, 351) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 759) [M::mem_pestat] mean and std.dev: (254.87, 120.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 963) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (248, 389, 537) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1115) [M::mem_pestat] mean and std.dev: (401.41, 189.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1404) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (226, 316, 372) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 664) [M::mem_pestat] mean and std.dev: (266.63, 95.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 810) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 677758 reads in 184.246 CPU sec, 5.817 real sec sorting block 163, #reads = 1077970 mem = 536879737 peak = 1173188608 [M::mem_process_seqs] Processed 677482 reads in 120.668 CPU sec, 3.821 real sec sorting block 164, #reads = 1076894 mem = 536877823 peak = 1173188608 [M::process] read 232502 sequences (34225570 bp) in 1.344 CPU sec, 1.379 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 96935, 0, 13) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (127, 221, 279) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 583) [M::mem_pestat] mean and std.dev: (181.33, 57.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 735) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (236, 374, 521) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1091) [M::mem_pestat] mean and std.dev: (387.99, 186.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1376) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (184, 347, 478) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1066) [M::mem_pestat] mean and std.dev: (348.62, 165.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1360) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 232502 reads in 37.816 CPU sec, 1.221 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (43, 282532, 4, 35) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (162, 299, 515) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1221) [M::mem_pestat] mean and std.dev: (336.77, 196.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1574) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (249, 392, 541) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1125) [M::mem_pestat] mean and std.dev: (404.33, 191.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1417) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (179, 344, 512) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1178) [M::mem_pestat] mean and std.dev: (342.34, 195.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1511) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (27, 282939, 1, 63) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (248, 295, 473) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 923) [M::mem_pestat] mean and std.dev: (330.68, 163.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1148) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (247, 393, 543) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1135) [M::mem_pestat] mean and std.dev: (404.81, 192.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1431) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (203, 334, 459) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 971) [M::mem_pestat] mean and std.dev: (330.32, 183.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1227) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 677502 reads in 219.145 CPU sec, 7.056 real sec [M::mem_process_seqs] Processed 677514 reads in 157.779 CPU sec, 5.097 real sec sorting block 165, #reads = 1075782 mem = 536881003 peak = 1173188608 os version: Linux 6.12.88 cpu vendor: GenuineIntel signature: 000c06f2 features: bfebfbff 7ffefbff extended: f3bfb7ef fb417ffe amd bits: 2c100800 00000121 brand: INTEL(R) XEON(R) PLATINUM 8559C threads: 31 algo: bwa-mem license: sentieon:klib=31 reads: 178745756 overall: 70050922496 mem 27990.018 user 457.498 sys 933.180 real [main] Version: 0.7.17-r1188 [main] CMD: /opt/conda/share/sentieon-202308.03-3/libexec/bwa mem -K 100000000 -Y -R @RG\tID:A23MHWWLT4.1136_3LU-T1-TDNA-1_A23MHWWLT4_1.L003\tPU:L003\tSM:1136_3LU-T1-TDNA-1_A23MHWWLT4_1\tLB:1136_3LU-T1-TDNA-1_A23MHWWLT4_1\tDS:s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta\tPL:ILLUMINA -t 31 ./BWAIndex/Homo_sapiens_assembly38.fasta.64 1136_3LU-T1-TDNA-1_A23MHWWLT4_1_R1.fastq.gz 1136_3LU-T1-TDNA-1_A23MHWWLT4_1_R2.fastq.gz [main] Real time: 933.215 sec; CPU: 28447.520 sec sorting block 166, #reads = 727418 mem = 362952619 peak = 1173188608 uniq header count 1 merging 167 blocks sw version: sentieon-genomics-202308.03 os version: Linux 6.12.88 cpu vendor: GenuineIntel signature: 000c06f2 features: bfebfbff 7ffefbff extended: f3bfb7ef fb417ffe amd bits: 2c100800 00000121 brand: INTEL(R) XEON(R) PLATINUM 8559C threads: 31 max 192 algo: util-sort license: sentieon:util=1 output file size: 10164057313 output reads: 179717092 bam_mem_sort: 167 calls 100.262 user 1.090 sys 102.111 real bam_write: 167 calls 63.457 user 3.418 sys 86.442 real execute: 1 calls 55.453 user 1.680 sys 1018.306 real merge_files: 1 calls 55.424 user 1.634 sys 84.394 real parse_chunk: 2667 calls 159.473 user 34.540 sys 205.958 real read_chunk: 7188 calls 75.655 user 46.799 sys 892.695 real sort_block: 1 calls 50.316 user 46.270 sys 857.767 real write_chunk: 4519 calls 55.077 user 1.287 sys 83.329 real overall: 3313467392 mem 3260.794 user 110.711 sys 1018.327 real ls: cannot access '*.cram': No such file or directory