[2026-06-06T01:01:44.784103Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-06T01:01:44.784695Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-06T01:01:44.784705Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-06T01:01:44.784710Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-06T01:01:44.784714Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXCv1xX0'
[2026-06-06T01:01:44.784718Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-06T01:01:44.784722Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-06T01:01:44.784726Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-06T01:01:44.784730Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-06-06T01:01:44.784734Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-06T01:01:44.784737Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-06T01:01:44.784741Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-06T01:01:44.784745Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-06T01:01:44.784748Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-06T01:01:44.785464Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-06T01:01:44.785573Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-06T01:01:44.791186Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-06T01:01:44.791900Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-06T01:01:44.792084Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-06T01:01:44.792508Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-06T01:01:44.792690Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.793091Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.793184Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.793256Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.793395Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.793563Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.793968Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.794046Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-06T01:01:44.794212Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.794340Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.794682Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.795159Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.796743Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.797505Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-06T01:01:44.797868Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.798117Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.798257Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.798326Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.798442Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.798505Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.798701Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.798771Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.798882Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.798949Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.799062Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.799223Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.799613Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.799704Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.799820Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.799885Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.799993Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.800059Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.800180Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.800242Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.800353Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.800417Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.800759Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.800977Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.801164Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.801228Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.801339Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.801400Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.801513Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.801577Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.801685Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.801851Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.801974Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.802107Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.802301Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.802434Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.802922Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.803031Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.803566Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.803927Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.804039Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.804101Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.804210Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.804279Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.804385Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.804447Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.804556Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.804616Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.804728Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.804790Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.804894Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.804974Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.805334Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.805795Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.806370Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.806437Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.806546Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.806608Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.806718Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.806779Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.808040Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.808646Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.808770Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.808839Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.808952Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.809019Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.809129Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.809193Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.809306Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.809403Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.809530Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.809603Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.809785Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.810395Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.810510Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.810576Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.810691Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.810756Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.810866Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.810954Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.811066Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.811129Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.811242Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.811304Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.826897Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.827405Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.827647Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-06T01:01:44.827713Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.828656Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.828755Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-06T01:01:44.828933Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.829264Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-06-06T01:01:44.829689Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.830426Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-06-06T01:01:44.830987Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-06-06T01:01:44.831147Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.832159Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-06-06T01:01:44.833940Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.834636Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-06T01:01:44.835196Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0000] Task initiated on local node
[2026-06-06T01:01:44.835773Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.836029Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-06-06T01:01:44.836541Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-06T01:01:44.837804Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-06-06T01:01:44.841230Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0015] Task initiated on local node
[2026-06-06T01:01:44.843604Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0000] Task initiated on local node
[2026-06-06T01:01:44.846952Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0003] Task initiated on local node
[2026-06-06T01:01:44.852034Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0001] Task initiated on local node
[2026-06-06T01:01:44.855394Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0004] Task initiated on local node
[2026-06-06T01:01:48.826817Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-06-06T01:01:48.828228Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-06T01:01:48.830931Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0007] Task initiated on local node
[2026-06-06T01:01:48.892184Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-06T01:01:48.893126Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-06T01:01:48.895554Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0002] Task initiated on local node
[2026-06-06T01:01:48.957137Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-06T01:01:48.958109Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-06-06T01:01:48.960656Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0000] Task initiated on local node
[2026-06-06T01:01:48.990055Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-06-06T01:01:48.990938Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-06-06T01:01:48.994053Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0009] Task initiated on local node
[2026-06-06T01:02:03.637826Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0012] Task initiated on local node
[2026-06-06T01:02:03.638049Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0001] Task initiated on local node
[2026-06-06T01:02:03.667803Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-06-06T01:02:03.667868Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-06T01:02:03.669310Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-06-06T01:02:03.669603Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-06T01:02:03.672554Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0012] Task initiated on local node
[2026-06-06T01:02:03.674145Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0001] Task initiated on local node
[2026-06-06T01:02:03.701884Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-06T01:02:03.702782Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-06-06T01:02:03.705336Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0014] Task initiated on local node
[2026-06-06T01:02:10.922884Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-06-06T01:02:10.923872Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-06-06T01:02:10.927010Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0013] Task initiated on local node
[2026-06-06T01:02:17.542728Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-06-06T01:02:17.543846Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-06T01:02:17.546606Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0000] Task initiated on local node
[2026-06-06T01:02:37.021298Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-06-06T01:02:37.022930Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-06T01:02:37.026310Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0010] Task initiated on local node
[2026-06-06T01:02:37.137052Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-06T01:02:37.137982Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-06T01:02:37.140471Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0010] Task initiated on local node
[2026-06-06T01:02:37.169863Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-06T01:02:37.170720Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-06-06T01:02:37.173072Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0009] Task initiated on local node
[2026-06-06T01:02:37.202569Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-06-06T01:02:37.203380Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-06-06T01:02:37.206021Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0016] Task initiated on local node
[2026-06-06T01:03:02.522542Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-06-06T01:03:02.524173Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-06-06T01:03:02.526843Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0012] Task initiated on local node
[2026-06-06T01:03:09.744291Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-06-06T01:03:09.745214Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-06T01:03:09.748133Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0004] Task initiated on local node
[2026-06-06T01:03:09.809460Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-06T01:03:09.810334Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-06-06T01:03:09.812705Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0006] Task initiated on local node
[2026-06-06T01:03:11.077017Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-06T01:03:11.078057Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-06T01:03:11.080701Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_002_chr3_0000] Task initiated on local node
[2026-06-06T01:03:11.142124Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-06T01:03:11.143005Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-06-06T01:03:11.145359Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0003] Task initiated on local node
[2026-06-06T01:03:25.518862Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-06-06T01:03:25.520646Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-06-06T01:03:25.523427Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0002] Task initiated on local node
[2026-06-06T01:03:29.694096Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-06-06T01:03:29.695153Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-06-06T01:03:29.697882Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0012] Task initiated on local node
[2026-06-06T01:03:29.759227Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-06-06T01:03:29.760155Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-06-06T01:03:29.763105Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0011] Task initiated on local node
[2026-06-06T01:03:40.677997Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-06T01:03:40.679025Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-06T01:03:40.682318Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0000] Task initiated on local node
[2026-06-06T01:03:40.743642Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-06T01:03:40.744514Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-06-06T01:03:40.747046Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0014] Task initiated on local node
[2026-06-06T01:03:40.776481Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-06-06T01:03:40.777295Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-06T01:03:40.779783Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0009] Task initiated on local node
[2026-06-06T01:03:40.841129Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-06T01:03:40.842020Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-06T01:03:40.844387Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0009] Task initiated on local node
[2026-06-06T01:03:40.873807Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-06T01:03:40.874612Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-06-06T01:03:40.876957Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0003] Task initiated on local node
[2026-06-06T01:04:02.095000Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:02.096559Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-06-06T01:04:02.099886Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0016] Task initiated on local node
[2026-06-06T01:04:02.160537Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:02.161317Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-06-06T01:04:02.163754Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0001] Task initiated on local node
[2026-06-06T01:04:02.225189Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:02.225979Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-06T01:04:02.228345Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0002] Task initiated on local node
[2026-06-06T01:04:02.257825Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:02.258592Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-06-06T01:04:02.261184Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0002] Task initiated on local node
[2026-06-06T01:04:13.827954Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:13.829591Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-06T01:04:13.832311Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0004] Task initiated on local node
[2026-06-06T01:04:13.861461Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:13.862261Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-06T01:04:13.864779Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0011] Task initiated on local node
[2026-06-06T01:04:13.926362Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:13.927099Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-06-06T01:04:13.929426Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0001] Task initiated on local node
[2026-06-06T01:04:13.959099Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:13.959879Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-06T01:04:13.962109Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0007] Task initiated on local node
[2026-06-06T01:04:13.991800Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:13.992503Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-06T01:04:13.994577Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0011] Task initiated on local node
[2026-06-06T01:04:14.024385Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:14.025095Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-06-06T01:04:14.027669Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0000] Task initiated on local node
[2026-06-06T01:04:14.089103Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:14.089882Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-06T01:04:14.092365Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0001] Task initiated on local node
[2026-06-06T01:04:22.663136Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:22.663929Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-06-06T01:04:22.666635Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0008] Task initiated on local node
[2026-06-06T01:04:30.734081Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:30.735594Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-06-06T01:04:30.738227Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0003] Task initiated on local node
[2026-06-06T01:04:30.799573Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:30.800303Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-06-06T01:04:30.803409Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0005] Task initiated on local node
[2026-06-06T01:04:32.467845Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:32.468723Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-06T01:04:32.471899Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0014] Task initiated on local node
[2026-06-06T01:04:32.532655Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:32.533360Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-06T01:04:32.535699Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0014] Task initiated on local node
[2026-06-06T01:04:32.565160Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:32.565878Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-06T01:04:32.568322Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0006] Task initiated on local node
[2026-06-06T01:04:32.630159Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:32.630852Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-06-06T01:04:32.633311Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0000] Task initiated on local node
[2026-06-06T01:04:32.694888Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:32.695572Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-06-06T01:04:32.697973Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0000] Task initiated on local node
[2026-06-06T01:04:32.727500Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:32.728193Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-06-06T01:04:32.730543Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0003] Task initiated on local node
[2026-06-06T01:04:32.792393Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:32.793069Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-06-06T01:04:32.795874Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0003] Task initiated on local node
[2026-06-06T01:04:36.362596Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:36.363419Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-06T01:04:36.366207Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0001] Task initiated on local node
[2026-06-06T01:04:36.427355Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:36.428035Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-06-06T01:04:36.430826Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0002] Task initiated on local node
[2026-06-06T01:04:36.492037Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:36.492707Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-06T01:04:36.495311Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0015] Task initiated on local node
[2026-06-06T01:04:36.556584Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:36.557258Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-06-06T01:04:36.560138Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0010] Task initiated on local node
[2026-06-06T01:04:38.425573Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:38.426406Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-06-06T01:04:38.428967Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0011] Task initiated on local node
[2026-06-06T01:04:38.490285Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:38.490949Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-06T01:04:38.493720Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0000] Task initiated on local node
[2026-06-06T01:04:38.555010Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:38.555658Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-06T01:04:38.558208Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0006] Task initiated on local node
[2026-06-06T01:04:38.587552Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:38.588144Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-06-06T01:04:38.590641Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0002] Task initiated on local node
[2026-06-06T01:04:43.212832Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:43.213547Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-06-06T01:04:43.216254Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0000] Task initiated on local node
[2026-06-06T01:04:43.245480Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:43.246121Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-06T01:04:43.248537Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0003] Task initiated on local node
[2026-06-06T01:04:43.310380Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:43.310989Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-06-06T01:04:43.313461Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0005] Task initiated on local node
[2026-06-06T01:04:59.980670Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:59.981848Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-06T01:04:59.984521Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0008] Task initiated on local node
[2026-06-06T01:05:00.046033Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:00.046661Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-06T01:05:00.049140Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0008] Task initiated on local node
[2026-06-06T01:05:00.078611Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:00.079213Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-06T01:05:00.081617Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0015] Task initiated on local node
[2026-06-06T01:05:00.111131Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:00.111705Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-06-06T01:05:00.114040Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0007] Task initiated on local node
[2026-06-06T01:05:28.736745Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:28.737934Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-06T01:05:28.741065Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0005] Task initiated on local node
[2026-06-06T01:05:28.802151Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:28.802749Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-06T01:05:28.805471Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0005] Task initiated on local node
[2026-06-06T01:05:28.834633Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:28.835207Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-06-06T01:05:28.838010Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0002] Task initiated on local node
[2026-06-06T01:05:28.899357Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:28.899960Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-06-06T01:05:28.902585Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0004] Task initiated on local node
[2026-06-06T01:05:34.114735Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:34.115294Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-06-06T01:05:34.118220Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0007] Task initiated on local node
[2026-06-06T01:05:34.147177Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:34.147744Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-06-06T01:05:34.150402Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0001] Task initiated on local node
[2026-06-06T01:05:38.069013Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:38.069774Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-06-06T01:05:38.072756Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0002] Task initiated on local node
[2026-06-06T01:05:45.991094Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:45.992399Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-06-06T01:05:45.995237Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0010] Task initiated on local node
[2026-06-06T01:05:46.056431Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:46.056992Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-06T01:05:46.059946Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0013] Task initiated on local node
[2026-06-06T01:05:46.120940Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:46.121462Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-06T01:05:46.123615Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0013] Task initiated on local node
[2026-06-06T01:05:46.153290Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:46.153820Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-06-06T01:05:46.156229Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0001] Task initiated on local node
[2026-06-06T01:05:46.218060Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:46.218577Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-06T01:05:46.220826Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0003] Task initiated on local node
[2026-06-06T01:05:46.250491Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:46.250992Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-06-06T01:05:46.253308Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0015] Task initiated on local node
[2026-06-06T01:05:46.315013Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:46.315501Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-06-06T01:05:46.317890Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0004] Task initiated on local node
[2026-06-06T01:05:54.386588Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:54.387163Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-06-06T01:05:54.390209Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0005] Task initiated on local node
[2026-06-06T01:05:54.451232Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:54.451728Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-06-06T01:05:54.454435Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0008] Task initiated on local node
[2026-06-06T01:05:54.515872Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:54.516378Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-06-06T01:05:54.518965Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0004] Task initiated on local node
[2026-06-06T01:05:54.580418Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:54.580909Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-06-06T01:05:54.583742Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0001] Task initiated on local node
[2026-06-06T01:05:54.613038Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:54.613523Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-06-06T01:05:54.616194Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0002] Task initiated on local node
[2026-06-06T01:05:54.677630Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:54.678128Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-06-06T01:05:54.680527Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0013] Task initiated on local node
[2026-06-06T01:05:54.710004Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-06-06T01:06:30.028770Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-06-06T01:06:30.030064Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-06-06T01:06:30.032869Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0005] Task initiated on local node
[2026-06-06T01:06:30.094008Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-06-06T01:06:36.812139Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-06-06T01:06:36.812686Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-06-06T01:06:36.815216Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0003] Task initiated on local node
[2026-06-06T01:06:36.876729Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-06-06T01:07:23.704543Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-06-06T01:07:23.706574Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-06-06T01:07:23.710335Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0006] Task initiated on local node
[2026-06-06T01:07:23.770655Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-06-06T01:08:00.642870Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-06-06T01:08:00.644059Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-06-06T01:08:00.646865Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0003] Task initiated on local node
[2026-06-06T01:08:00.708288Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-06-06T01:08:11.024524Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-06-06T01:08:11.025707Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-06-06T01:08:11.028572Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0004] Task initiated on local node
[2026-06-06T01:08:11.089715Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-06-06T01:08:33.962959Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-06-06T01:08:33.964070Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-06-06T01:08:33.966593Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0004] Task initiated on local node
[2026-06-06T01:08:34.028127Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-06-06T01:13:00.221776Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-06-06T01:13:00.222914Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-06-06T01:13:00.225531Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0002] Task initiated on local node
[2026-06-06T01:13:00.287005Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-06-06T01:13:00.287274Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-06T01:13:00.287390Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-06T01:13:00.287956Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-06T01:13:00.288741Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-06T01:13:00.293003Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-06T01:13:00.294155Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-06T01:13:00.295152Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-06T01:13:00.353170Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-06T01:13:00.353232Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-06T01:13:00.353258Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-06T01:13:00.353439Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-06T01:13:00.353904Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-06T01:13:00.356254Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-06T01:13:00.387560Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-06T01:13:00.418428Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-06T01:13:00.418490Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-06T01:13:00.418654Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-06T01:13:00.420787Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-06T01:13:00.450674Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-06T01:13:03.571581Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-06T01:13:18.561492Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-06T01:13:18.561492Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] 
[2026-06-06T01:13:18.561492Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-06T01:13:18.561571Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] 
[2026-06-06T01:13:18.561578Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-06T01:13:18.561584Z] [nf-8ff2adc8decd71a4b4507c332524705b-1eb90-blvs5] [603_1] [WorkflowRunner] Elapsed time for full workflow: 693 sec