cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i 1029_I9B-T1-TDNA-1_A23MHWWLT4_1.md.bam --algo AlignmentStat 1029_I9B-T1-TDNA-1_A23MHWWLT4_1.sentieon.alignment_summary_metrics --algo InsertSizeMetricAlgo 1029_I9B-T1-TDNA-1_A23MHWWLT4_1.sentieon.insert_size_metrics --algo QualDistribution 1029_I9B-T1-TDNA-1_A23MHWWLT4_1.sentieon.quality_distribution_metrics --algo BaseDistributionByCycle 1029_I9B-T1-TDNA-1_A23MHWWLT4_1.sentieon.base_distribution_by_cycle_metrics --algo MeanQualityByCycle 1029_I9B-T1-TDNA-1_A23MHWWLT4_1.sentieon.quality_by_cycle_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:187000001, elapsed 12.9s, est remaining 246.0s, peak mem 4076MB, user 289.1s, sys 3.1s, output queue size 146
progress 10% @chr2:46000001, elapsed 23.8s, est remaining 214.6s, peak mem 6131MB, user 650.9s, sys 5.1s, output queue size 117
progress 15% @chr2:224000001, elapsed 37.7s, est remaining 213.7s, peak mem 8319MB, user 1063.7s, sys 8.0s, output queue size 161
progress 20% @chr3:174000001, elapsed 48.4s, est remaining 193.8s, peak mem 8347MB, user 1385.4s, sys 9.3s, output queue size 283
progress 25% @chr4:135000001, elapsed 57.6s, est remaining 172.7s, peak mem 8455MB, user 1705.2s, sys 10.4s, output queue size 302
progress 30% @chr5:94000001, elapsed 64.6s, est remaining 150.7s, peak mem 8712MB, user 1887.1s, sys 11.0s, output queue size 464
progress 35% @chr6:44000001, elapsed 76.9s, est remaining 142.9s, peak mem 9463MB, user 2218.3s, sys 12.4s, output queue size 625
progress 40% @chr7:66000001, elapsed 91.2s, est remaining 136.8s, peak mem 10895MB, user 2584.5s, sys 13.9s, output queue size 786
progress 45% @chr8:70000001, elapsed 104.5s, est remaining 127.7s, peak mem 10911MB, user 3077.9s, sys 16.0s, output queue size 356
progress 50% @chr9:81000001, elapsed 114.9s, est remaining 114.9s, peak mem 10911MB, user 3370.9s, sys 17.0s, output queue size 366
progress 55% @chr10:73000001, elapsed 128.4s, est remaining 105.0s, peak mem 10969MB, user 3777.4s, sys 18.0s, output queue size 485
progress 60% @chr11:134000001, elapsed 141.4s, est remaining 94.3s, peak mem 10969MB, user 4188.1s, sys 19.2s, output queue size 510
progress 65% @chr13:23000001, elapsed 154.7s, est remaining 83.3s, peak mem 10969MB, user 4565.4s, sys 20.2s, output queue size 672
progress 70% @chr14:85000001, elapsed 162.8s, est remaining 69.8s, peak mem 10969MB, user 4788.4s, sys 20.8s, output queue size 833
progress 75% @chr16:42000001, elapsed 177.1s, est remaining 59.0s, peak mem 10970MB, user 5300.2s, sys 22.4s, output queue size 461
progress 80% @chr18:13000001, elapsed 197.8s, est remaining 49.5s, peak mem 11039MB, user 5856.3s, sys 24.0s, output queue size 623
progress 85% @chr19:42000001, elapsed 216.6s, est remaining 38.2s, peak mem 11039MB, user 6461.3s, sys 25.5s, output queue size 785
progress 90% @chrX:30000001, elapsed 233.3s, est remaining 25.9s, peak mem 11983MB, user 7029.4s, sys 27.2s, output queue size 513
progress 95% @chrY:54000001, elapsed 243.7s, est remaining 12.8s, peak mem 11983MB, user 7306.9s, sys 28.0s, output queue size 675
progress 100% @chrX:67000001, elapsed 281.3s, est remaining 0.0s, peak mem 11983MB, user 7735.9s, sys 29.1s, output queue size 3540
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 192
algo: AlignmentStat InsertSizeMetricAlgo QualDistribution BaseDistributionByCycle MeanQualityByCycle
license: sentieon:Metrics=31
input file size: 81150013433
reads: 1554117329
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1299.989 user 25.224 sys 1327.061 real
done: 1 calls 0.060 user 0.019 sys 0.088 real
exec_no_coor: 1 calls 0.017 user 0.008 sys 0.029 real
execute: 1 calls 0.002 user 0.001 sys 281.399 real
idle: 1003 calls 0.176 user 0.002 sys 990.342 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 12565168128 mem 7738.116 user 29.688 sys 282.897 real