cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i 1029_FZX-T1-TDNA-1_A23MHWWLT4_1.md.bam --algo AlignmentStat 1029_FZX-T1-TDNA-1_A23MHWWLT4_1.sentieon.alignment_summary_metrics --algo InsertSizeMetricAlgo 1029_FZX-T1-TDNA-1_A23MHWWLT4_1.sentieon.insert_size_metrics --algo QualDistribution 1029_FZX-T1-TDNA-1_A23MHWWLT4_1.sentieon.quality_distribution_metrics --algo BaseDistributionByCycle 1029_FZX-T1-TDNA-1_A23MHWWLT4_1.sentieon.base_distribution_by_cycle_metrics --algo MeanQualityByCycle 1029_FZX-T1-TDNA-1_A23MHWWLT4_1.sentieon.quality_by_cycle_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:188000001, elapsed 9.4s, est remaining 177.8s, peak mem 3152MB, user 209.6s, sys 2.8s, output queue size 146
progress 10% @chr2:94000001, elapsed 18.2s, est remaining 163.5s, peak mem 5459MB, user 487.4s, sys 5.3s, output queue size 117
progress 15% @chr3:8000001, elapsed 29.7s, est remaining 168.0s, peak mem 8081MB, user 806.5s, sys 7.4s, output queue size 210
progress 20% @chr3:176000001, elapsed 38.6s, est remaining 154.6s, peak mem 8156MB, user 1099.4s, sys 10.6s, output queue size 283
progress 25% @chr4:124000001, elapsed 45.2s, est remaining 135.6s, peak mem 8223MB, user 1306.7s, sys 12.1s, output queue size 444
progress 30% @chr5:107000001, elapsed 50.7s, est remaining 118.2s, peak mem 8256MB, user 1481.5s, sys 13.1s, output queue size 464
progress 35% @chr6:91000001, elapsed 59.4s, est remaining 110.3s, peak mem 8542MB, user 1716.7s, sys 14.2s, output queue size 625
progress 40% @chr7:67000001, elapsed 69.8s, est remaining 104.7s, peak mem 8757MB, user 1996.9s, sys 15.2s, output queue size 786
progress 45% @chr8:74000001, elapsed 81.9s, est remaining 100.1s, peak mem 9242MB, user 2414.3s, sys 16.8s, output queue size 204
progress 50% @chr9:102000001, elapsed 92.4s, est remaining 92.4s, peak mem 9462MB, user 2691.5s, sys 17.9s, output queue size 366
progress 55% @chr10:118000001, elapsed 104.4s, est remaining 85.4s, peak mem 9821MB, user 3040.9s, sys 19.1s, output queue size 485
progress 60% @chr12:5000001, elapsed 114.8s, est remaining 76.5s, peak mem 9821MB, user 3364.6s, sys 20.2s, output queue size 510
progress 65% @chr12:6000001, elapsed 128.3s, est remaining 69.1s, peak mem 10050MB, user 3698.8s, sys 21.2s, output queue size 672
progress 70% @chr14:76000001, elapsed 135.9s, est remaining 58.2s, peak mem 10076MB, user 3976.6s, sys 22.0s, output queue size 833
progress 75% @chr16:42000001, elapsed 148.5s, est remaining 49.5s, peak mem 10076MB, user 4295.2s, sys 22.9s, output queue size 995
progress 80% @chr18:27000001, elapsed 168.3s, est remaining 42.1s, peak mem 10076MB, user 4959.0s, sys 25.1s, output queue size 623
progress 85% @chr19:55000001, elapsed 185.4s, est remaining 32.7s, peak mem 10076MB, user 5521.9s, sys 26.6s, output queue size 785
progress 90% @chrX:42000001, elapsed 197.7s, est remaining 22.0s, peak mem 10283MB, user 5837.5s, sys 27.5s, output queue size 947
progress 95% @chrY:55000001, elapsed 204.4s, est remaining 10.8s, peak mem 10384MB, user 6047.4s, sys 28.4s, output queue size 1109
progress 100% @chr22:23000001, elapsed 230.0s, est remaining 0.0s, peak mem 10384MB, user 6445.2s, sys 29.6s, output queue size 3635
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 192
algo: AlignmentStat InsertSizeMetricAlgo QualDistribution BaseDistributionByCycle MeanQualityByCycle
license: sentieon:Metrics=31
input file size: 67770633046
reads: 1275212856
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1100.026 user 24.076 sys 1116.176 real
done: 1 calls 0.086 user 0.010 sys 0.099 real
exec_no_coor: 1 calls 0.007 user 0.007 sys 0.027 real
execute: 1 calls 0.005 user 0.003 sys 230.246 real
idle: 722 calls 0.130 user 0.001 sys 694.908 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 10889404416 mem 6447.392 user 30.316 sys 231.797 real