cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i 1029_FRC-T1-TDNA-1_A23MHWWLT4_1.md.bam --algo HsMetricAlgo --targets_list targets/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity_footprint.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed 1029_FRC-T1-TDNA-1_A23MHWWLT4_1_xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity_footprint.sentieon.hs_metrics This software is licensed to bgold@natera.com by Sentieon Inc. progress 5% @chr1:188000001, elapsed 5.5s, est remaining 104.6s, peak mem 3575MB, user 126.0s, sys 3.1s, output queue size 146 progress 10% @chr2:71000001, elapsed 9.7s, est remaining 87.2s, peak mem 4670MB, user 268.6s, sys 5.8s, output queue size 117 progress 15% @chr2:177000001, elapsed 14.1s, est remaining 80.1s, peak mem 6817MB, user 402.6s, sys 8.5s, output queue size 122 progress 20% @chr3:174000001, elapsed 18.3s, est remaining 73.2s, peak mem 6817MB, user 521.1s, sys 9.6s, output queue size 283 progress 25% @chr4:135000001, elapsed 21.8s, est remaining 65.5s, peak mem 6817MB, user 638.4s, sys 10.6s, output queue size 302 progress 30% @chr5:100000001, elapsed 24.8s, est remaining 57.8s, peak mem 6817MB, user 725.7s, sys 11.5s, output queue size 464 progress 35% @chr6:70000001, elapsed 29.1s, est remaining 54.0s, peak mem 6920MB, user 836.7s, sys 12.4s, output queue size 625 progress 40% @chr7:67000001, elapsed 33.7s, est remaining 50.6s, peak mem 7175MB, user 977.5s, sys 13.8s, output queue size 786 progress 45% @chr8:54000001, elapsed 38.8s, est remaining 47.4s, peak mem 7675MB, user 1137.3s, sys 15.1s, output queue size 204 progress 50% @chr9:87000001, elapsed 43.6s, est remaining 43.6s, peak mem 8014MB, user 1250.1s, sys 16.1s, output queue size 366 progress 55% @chr10:104000001, elapsed 48.8s, est remaining 39.9s, peak mem 8318MB, user 1435.0s, sys 17.7s, output queue size 348 progress 60% @chr12:1000001, elapsed 54.1s, est remaining 36.0s, peak mem 8318MB, user 1598.5s, sys 18.8s, output queue size 510 progress 65% @chr13:23000001, elapsed 58.9s, est remaining 31.7s, peak mem 8318MB, user 1747.9s, sys 19.7s, output queue size 474 progress 70% @chr14:72000001, elapsed 62.0s, est remaining 26.6s, peak mem 8324MB, user 1840.6s, sys 20.3s, output queue size 635 progress 75% @chr16:42000001, elapsed 67.2s, est remaining 22.4s, peak mem 8427MB, user 2003.9s, sys 21.3s, output queue size 461 progress 80% @chr18:25000001, elapsed 75.7s, est remaining 18.9s, peak mem 8605MB, user 2228.5s, sys 22.8s, output queue size 623 progress 85% @chr19:49000001, elapsed 82.3s, est remaining 14.5s, peak mem 8605MB, user 2447.3s, sys 23.9s, output queue size 785 progress 90% @chrX:34000001, elapsed 87.1s, est remaining 9.7s, peak mem 8647MB, user 2622.4s, sys 25.3s, output queue size 513 progress 95% @chrY:54000001, elapsed 89.9s, est remaining 4.7s, peak mem 8732MB, user 2718.3s, sys 26.0s, output queue size 240 progress 100% @chr22:23000001, elapsed 95.9s, est remaining 0.0s, peak mem 8732MB, user 2805.5s, sys 26.9s, output queue size 3635 sw version: sentieon-genomics-202308.03 os version: Linux 6.12.88 cpu vendor: GenuineIntel signature: 000c06f2 features: bfebfbff 7ffefbff extended: f3bfb7ef fb417ffe amd bits: 2c100800 00000121 brand: INTEL(R) XEON(R) PLATINUM 8559C threads: 31 max 192 algo: HsMetricAlgo license: sentieon:Metrics=31 input file size: 72638040988 reads: 1429869427 contig: 3367 intervals 3217346917 bases advance: 3219322 calls 1184.782 user 23.586 sys 1207.095 real done: 1 calls 0.383 user 0.057 sys 0.449 real exec_no_coor: 1 calls 0.011 user 0.000 sys 0.025 real execute: 1 calls 0.000 user 0.002 sys 95.929 real idle: 216 calls 0.140 user 0.001 sys 181.728 real init: 1 calls 0.000 user 0.000 sys 0.000 real overall: 9156837376 mem 2807.937 user 27.646 sys 98.067 real