cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i 1029_FRC-T1-TDNA-1_A23MHWWLT4_1.md.bam --algo AlignmentStat 1029_FRC-T1-TDNA-1_A23MHWWLT4_1.sentieon.alignment_summary_metrics --algo InsertSizeMetricAlgo 1029_FRC-T1-TDNA-1_A23MHWWLT4_1.sentieon.insert_size_metrics --algo QualDistribution 1029_FRC-T1-TDNA-1_A23MHWWLT4_1.sentieon.quality_distribution_metrics --algo BaseDistributionByCycle 1029_FRC-T1-TDNA-1_A23MHWWLT4_1.sentieon.base_distribution_by_cycle_metrics --algo MeanQualityByCycle 1029_FRC-T1-TDNA-1_A23MHWWLT4_1.sentieon.quality_by_cycle_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:46000001, elapsed 12.4s, est remaining 236.3s, peak mem 3843MB, user 304.6s, sys 4.0s, output queue size 145
progress 10% @chr2:80000001, elapsed 22.1s, est remaining 198.8s, peak mem 5554MB, user 618.1s, sys 5.8s, output queue size 117
progress 15% @chr2:201000001, elapsed 32.6s, est remaining 184.8s, peak mem 6601MB, user 938.8s, sys 8.1s, output queue size 122
progress 20% @chr3:167000001, elapsed 42.1s, est remaining 168.3s, peak mem 6847MB, user 1199.6s, sys 9.4s, output queue size 283
progress 25% @chr4:135000001, elapsed 50.1s, est remaining 150.2s, peak mem 6915MB, user 1480.7s, sys 10.6s, output queue size 302
progress 30% @chr5:107000001, elapsed 56.7s, est remaining 132.4s, peak mem 7160MB, user 1676.3s, sys 11.4s, output queue size 464
progress 35% @chr6:70000001, elapsed 66.6s, est remaining 123.6s, peak mem 7398MB, user 1935.9s, sys 12.5s, output queue size 625
progress 40% @chr7:65000001, elapsed 79.4s, est remaining 119.1s, peak mem 7701MB, user 2290.6s, sys 13.7s, output queue size 786
progress 45% @chr8:54000001, elapsed 94.0s, est remaining 114.9s, peak mem 8284MB, user 2699.7s, sys 14.8s, output queue size 948
progress 50% @chr9:94000001, elapsed 108.1s, est remaining 108.1s, peak mem 8877MB, user 3060.4s, sys 15.9s, output queue size 366
progress 55% @chr10:104000001, elapsed 123.5s, est remaining 101.1s, peak mem 9096MB, user 3553.7s, sys 17.7s, output queue size 527
progress 60% @chr12:1000001, elapsed 138.3s, est remaining 92.2s, peak mem 9096MB, user 4104.9s, sys 19.0s, output queue size 510
progress 65% @chr12:123000001, elapsed 151.9s, est remaining 81.8s, peak mem 9096MB, user 4502.9s, sys 20.2s, output queue size 474
progress 70% @chr14:71000001, elapsed 160.3s, est remaining 68.7s, peak mem 9096MB, user 4770.7s, sys 21.1s, output queue size 635
progress 75% @chr16:42000001, elapsed 173.6s, est remaining 57.9s, peak mem 9096MB, user 5142.6s, sys 22.1s, output queue size 797
progress 80% @chr18:25000001, elapsed 194.3s, est remaining 48.6s, peak mem 9220MB, user 5669.8s, sys 23.7s, output queue size 959
progress 85% @chr20:25000001, elapsed 209.6s, est remaining 37.0s, peak mem 9220MB, user 6255.7s, sys 25.1s, output queue size 785
progress 90% @chrX:36000001, elapsed 221.2s, est remaining 24.6s, peak mem 9358MB, user 6622.7s, sys 26.2s, output queue size 947
progress 95% @chrY:54000001, elapsed 228.4s, est remaining 12.0s, peak mem 9358MB, user 6807.0s, sys 26.8s, output queue size 1109
progress 100% @chr22:23000001, elapsed 247.7s, est remaining 0.0s, peak mem 9358MB, user 7177.7s, sys 27.7s, output queue size 3635
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000c06f2
  features: bfebfbff 7ffefbff
  extended: f3bfb7ef fb417ffe
  amd bits: 2c100800 00000121
     brand: INTEL(R) XEON(R) PLATINUM 8559C
threads: 31 max 192
algo: AlignmentStat InsertSizeMetricAlgo QualDistribution BaseDistributionByCycle MeanQualityByCycle
license: sentieon:Metrics=31
input file size: 72638040988
reads: 1429869427
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1261.462 user 23.508 sys 1284.718 real
done: 1 calls 0.096 user 0.000 sys 0.098 real
exec_no_coor: 1 calls 0.017 user 0.009 sys 0.040 real
execute: 1 calls 0.001 user 0.001 sys 247.972 real
idle: 548 calls 0.151 user 0.000 sys 513.507 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 9813508096 mem 7180.641 user 28.219 sys 249.481 real