cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i 659_cuO-T1-TDNA-1_A23MHWWLT4_1.md.bam --algo HsMetricAlgo --targets_list targets/xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_AND_foresight_clarity.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed 659_cuO-T1-TDNA-1_A23MHWWLT4_1_xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_AND_foresight_clarity.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:181000001, elapsed 0.6s, est remaining 11.3s, peak mem 619MB, user 13.9s, sys 0.4s, output queue size 145
progress 10% @chr2:90000001, elapsed 1.1s, est remaining 9.5s, peak mem 728MB, user 29.5s, sys 0.6s, output queue size 48
progress 15% @chr2:177000001, elapsed 1.6s, est remaining 9.1s, peak mem 1067MB, user 44.8s, sys 0.8s, output queue size 203
progress 20% @chr3:161000001, elapsed 2.1s, est remaining 8.3s, peak mem 1087MB, user 59.9s, sys 1.1s, output queue size 141
progress 25% @chr4:102000001, elapsed 2.5s, est remaining 7.5s, peak mem 1116MB, user 73.4s, sys 1.3s, output queue size 302
progress 30% @chr5:104000001, elapsed 2.9s, est remaining 6.7s, peak mem 1129MB, user 83.8s, sys 1.4s, output queue size 464
progress 35% @chr6:41000001, elapsed 3.3s, est remaining 6.2s, peak mem 1156MB, user 96.4s, sys 1.6s, output queue size 625
progress 40% @chr7:65000001, elapsed 3.8s, est remaining 5.7s, peak mem 1185MB, user 111.6s, sys 1.8s, output queue size 195
progress 45% @chr8:78000001, elapsed 4.4s, est remaining 5.3s, peak mem 1206MB, user 128.6s, sys 2.0s, output queue size 204
progress 50% @chr9:81000001, elapsed 4.8s, est remaining 4.8s, peak mem 1254MB, user 140.9s, sys 2.3s, output queue size 366
progress 55% @chr10:115000001, elapsed 5.4s, est remaining 4.4s, peak mem 1283MB, user 158.1s, sys 2.5s, output queue size 348
progress 60% @chr11:130000001, elapsed 5.9s, est remaining 3.9s, peak mem 1292MB, user 174.7s, sys 2.7s, output queue size 510
progress 65% @chr13:33000001, elapsed 6.4s, est remaining 3.5s, peak mem 1304MB, user 189.5s, sys 2.9s, output queue size 672
progress 70% @chr14:60000001, elapsed 6.8s, est remaining 2.9s, peak mem 1305MB, user 200.6s, sys 3.1s, output queue size 833
progress 75% @chr16:42000001, elapsed 7.3s, est remaining 2.4s, peak mem 1344MB, user 218.0s, sys 3.3s, output queue size 461
progress 80% @chr18:29000001, elapsed 8.1s, est remaining 2.0s, peak mem 1356MB, user 239.2s, sys 3.5s, output queue size 623
progress 85% @chr20:18000001, elapsed 8.8s, est remaining 1.6s, peak mem 1374MB, user 264.4s, sys 3.7s, output queue size 351
progress 90% @chrX:18000001, elapsed 9.3s, est remaining 1.0s, peak mem 1387MB, user 278.7s, sys 3.8s, output queue size 513
progress 95% @chrY:49000001, elapsed 9.7s, est remaining 0.5s, peak mem 1410MB, user 288.8s, sys 4.0s, output queue size 675
progress 100% @chrX:67000001, elapsed 10.3s, est remaining 0.0s, peak mem 1483MB, user 300.5s, sys 4.2s, output queue size 3540
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 192
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 8443237896
reads: 177115205
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 137.827 user 2.730 sys 141.217 real
done: 1 calls 0.261 user 0.000 sys 0.271 real
exec_no_coor: 1 calls 0.002 user 0.000 sys 0.002 real
execute: 1 calls 0.005 user 0.003 sys 10.341 real
idle: 75 calls 0.100 user 0.008 sys 45.414 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 1558827008 mem 302.152 user 4.558 sys 11.867 real