Detecting adapter sequence for read1...
>Illumina TruSeq Adapter Read 1
AGATCGGAAGAGCACACGTCTGAACTCCAGTCA

Detecting adapter sequence for read2...
>Illumina TruSeq Adapter Read 2
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

Read1 before filtering:
total reads: 88781038
total bases: 13405936738
Q20 bases: 13047007208(97.3226%)
Q30 bases: 12362908653(92.2197%)
Q40 bases: 12362908653(92.2197%)

Read2 before filtering:
total reads: 88781038
total bases: 13405936738
Q20 bases: 12880928257(96.0838%)
Q30 bases: 11965034205(89.2518%)
Q40 bases: 11965034205(89.2518%)

Read1 after filtering:
total reads: 87646929
total bases: 12755908239
Q20 bases: 12467448318(97.7386%)
Q30 bases: 11846869754(92.8736%)
Q40 bases: 11846869754(92.8736%)

Read2 after filtering:
total reads: 87646929
total bases: 12756980953
Q20 bases: 12342983565(96.7547%)
Q30 bases: 11526769970(90.3566%)
Q40 bases: 11526769970(90.3566%)

Filtering result:
reads passed filter: 175293858
reads failed due to low quality: 2256694
reads failed due to too many N: 9224
reads failed due to too short: 2300
reads with adapter trimmed: 27668222
bases trimmed due to adapters: 959974562

Duplication rate: 10.4731%

Insert size peak (evaluated by paired-end reads): 189

JSON report: 659_cfy-T1-TDNA-1_A23MHWWLT4_1.fastp.json
HTML report: 659_cfy-T1-TDNA-1_A23MHWWLT4_1.fastp.html

fastp --in1 659_cfy-T1-TDNA-1_A23MHWWLT4_1_S32_L004_R1_001.fastq.gz --in2 659_cfy-T1-TDNA-1_A23MHWWLT4_1_S32_L004_R2_001.fastq.gz --out1 659_cfy-T1-TDNA-1_A23MHWWLT4_1/659_cfy-T1-TDNA-1_A23MHWWLT4_1_R1.fastq.gz --out2 659_cfy-T1-TDNA-1_A23MHWWLT4_1/659_cfy-T1-TDNA-1_A23MHWWLT4_1_R2.fastq.gz --detect_adapter_for_pe --length_required 15 --json 659_cfy-T1-TDNA-1_A23MHWWLT4_1.fastp.json --html 659_cfy-T1-TDNA-1_A23MHWWLT4_1.fastp.html --thread 4 
fastp v1.0.1, time used: 874 seconds