Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/87/4d24a8043550ff7295820d491d8a43/output/Reports/Quality_Metrics.csv
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/93/efa91fc1793af7e19448772a3cc5c1/output/Reports/Demultiplex_Stats.csv
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e6/1a973e9635583ceb00b90f4696f91d/output/Reports/Index_Hopping_Counts.csv
Downloading: s3://natera-labdata-rnd-dev-s3/illumina/20260318_LH00527_0065_A23MHWWLT4/InterOp/ExtendedTileMetricsOut.bin
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e6/1a973e9635583ceb00b90f4696f91d/output/Reports/Demultiplex_Stats.csv
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f6/ace6d075a4bfebb8af1665430ce487/output/Reports/Quality_Metrics.csv
Downloading: s3://natera-labdata-rnd-dev-s3/illumina/20260318_LH00527_0065_A23MHWWLT4/InterOp/EmpiricalPhasingMetricsOut.bin
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/14/50c5166e12c18813ce8b4ac6e98afc/.command.sh
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/87/4d24a8043550ff7295820d491d8a43/output/Reports/Index_Hopping_Counts.csv
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e6/1a973e9635583ceb00b90f4696f91d/output/Reports/Quality_Metrics.csv
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/61/552ffe6d4da3743650714c6feaf448/output/Reports/Demultiplex_Stats.csv
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/36/0661beadb497aec7e239ce346c70c2/output/Reports/Demultiplex_Stats.csv
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/93/efa91fc1793af7e19448772a3cc5c1/output/Reports/Quality_Metrics.csv
Downloading: s3://natera-labdata-rnd-dev-s3/illumina/20260318_LH00527_0065_A23MHWWLT4/InterOp/TileMetricsOut.bin
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/61/552ffe6d4da3743650714c6feaf448/output/Reports/Index_Hopping_Counts.csv
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e9/af6afb342ea146b5f21da60283a8c6/output/Reports/Quality_Metrics.csv
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e9/af6afb342ea146b5f21da60283a8c6/output/Reports/Demultiplex_Stats.csv
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/93/efa91fc1793af7e19448772a3cc5c1/output/Reports/Index_Hopping_Counts.csv
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e9/af6afb342ea146b5f21da60283a8c6/output/Reports/Index_Hopping_Counts.csv
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f6/ace6d075a4bfebb8af1665430ce487/output/Reports/Demultiplex_Stats.csv
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/87/4d24a8043550ff7295820d491d8a43/output/Reports/Demultiplex_Stats.csv
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/52/928d434150a22d0ca11301a5843191/output/Reports/Index_Hopping_Counts.csv
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/52/928d434150a22d0ca11301a5843191/output/Reports/Demultiplex_Stats.csv
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/36/0661beadb497aec7e239ce346c70c2/output/Reports/Index_Hopping_Counts.csv
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/36/0661beadb497aec7e239ce346c70c2/output/Reports/Quality_Metrics.csv
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/61/552ffe6d4da3743650714c6feaf448/output/Reports/Quality_Metrics.csv
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/52/928d434150a22d0ca11301a5843191/output/Reports/Quality_Metrics.csv
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/14/50c5166e12c18813ce8b4ac6e98afc/.command.run
Downloading: s3://natera-labdata-rnd-dev-s3/illumina/20260318_LH00527_0065_A23MHWWLT4/RunInfo.xml
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f6/ace6d075a4bfebb8af1665430ce487/output/Reports/Index_Hopping_Counts.csv
==> STAGING COMPLETE (30 inputs)
Wrote flowcell_qc.csv with 13/13 metrics populated