This software is licensed to bgold@natera.com by Sentieon Inc. cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/util sort -r Homo_sapiens_assembly38.fasta -t 31 -o 1029_I9B-T1-TDNA-1_A23MHWWLT4_1.bam --sam2bam - This software is licensed to bgold@natera.com by Sentieon Inc. version: sentieon-genomics-202308.03 [M::bwa_idx_load_from_disk] read 3171 ALT contigs [M::main_mem] bwa index loaded in 2293.109 CPU sec, 108.807 real sec [M::process] read 691358 sequences (100000211 bp) in 1.667 CPU sec, 1.674 real sec... [M::process] read 690554 sequences (100000088 bp) in 1.900 CPU sec, 2.057 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (34, 281430, 18, 44) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (155, 352, 512) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1226) [M::mem_pestat] mean and std.dev: (337.48, 217.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1583) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (181, 280, 403) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 847) [M::mem_pestat] mean and std.dev: (303.03, 152.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1069) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (1522, 2450, 3366) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7054) [M::mem_pestat] mean and std.dev: (2407.56, 1549.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8898) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (157, 255, 505) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1201) [M::mem_pestat] mean and std.dev: (340.70, 299.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1549) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 689824 sequences (100000153 bp) in 2.079 CPU sec, 2.164 real sec... [M::process] read 689470 sequences (100000048 bp) in 1.952 CPU sec, 2.075 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (25, 281329, 10, 25) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (191, 299, 978) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2552) [M::mem_pestat] mean and std.dev: (491.56, 453.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3339) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (183, 283, 408) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 858) [M::mem_pestat] mean and std.dev: (306.33, 153.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1083) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (515, 985, 1090) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2240) [M::mem_pestat] mean and std.dev: (853.70, 403.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2815) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (215, 262, 442) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 896) [M::mem_pestat] mean and std.dev: (310.56, 156.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1123) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 691358 reads in 236.439 CPU sec, 8.119 real sec [M::mem_process_seqs] Processed 690554 reads in 155.078 CPU sec, 5.296 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (60, 280574, 9, 37) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (209, 317, 576) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1310) [M::mem_pestat] mean and std.dev: (436.73, 286.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1677) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (185, 287, 410) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 860) [M::mem_pestat] mean and std.dev: (308.78, 153.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1085) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (219, 352, 737) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1773) [M::mem_pestat] mean and std.dev: (478.74, 372.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2291) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 0, #reads = 1073588 mem = 536877249 peak = 537731072 [M::process] read 688998 sequences (100000048 bp) in 2.954 CPU sec, 3.242 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (60, 280405, 10, 29) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (254, 270, 635) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1397) [M::mem_pestat] mean and std.dev: (356.04, 208.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1778) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (186, 289, 412) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 864) [M::mem_pestat] mean and std.dev: (310.66, 154.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1090) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (118, 678, 2351) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6817) [M::mem_pestat] mean and std.dev: (972.50, 988.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9050) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (220, 295, 1192) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3136) [M::mem_pestat] mean and std.dev: (470.44, 384.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4108) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 688728 sequences (100000149 bp) in 2.297 CPU sec, 2.442 real sec... [M::mem_process_seqs] Processed 689824 reads in 232.099 CPU sec, 7.745 real sec [M::mem_process_seqs] Processed 689470 reads in 158.838 CPU sec, 5.505 real sec sorting block 1, #reads = 1073531 mem = 536876734 peak = 671846400 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (41, 281005, 7, 41) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (238, 403, 738) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1738) [M::mem_pestat] mean and std.dev: (490.32, 354.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2238) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (187, 290, 413) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 865) [M::mem_pestat] mean and std.dev: (311.54, 154.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1091) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (254, 317, 493) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 971) [M::mem_pestat] mean and std.dev: (373.24, 201.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1210) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 687794 sequences (100000016 bp) in 2.719 CPU sec, 2.916 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (32, 280584, 9, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (137, 203, 412) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 962) [M::mem_pestat] mean and std.dev: (260.61, 194.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1237) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (188, 292, 417) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 875) [M::mem_pestat] mean and std.dev: (313.72, 155.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1104) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (258, 301, 472) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 900) [M::mem_pestat] mean and std.dev: (279.79, 95.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1114) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 687750 sequences (100000299 bp) in 2.206 CPU sec, 2.243 real sec... [M::mem_process_seqs] Processed 688998 reads in 231.854 CPU sec, 7.554 real sec [M::mem_process_seqs] Processed 688728 reads in 159.836 CPU sec, 5.199 real sec sorting block 2, #reads = 1072763 mem = 536878203 peak = 757276672 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (53, 280266, 17, 35) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (294, 605, 1246) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3150) [M::mem_pestat] mean and std.dev: (778.02, 567.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4102) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (191, 295, 420) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 878) [M::mem_pestat] mean and std.dev: (316.00, 155.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1107) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (577, 1570, 2133) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5245) [M::mem_pestat] mean and std.dev: (1271.25, 846.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6801) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (195, 255, 497) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1101) [M::mem_pestat] mean and std.dev: (241.75, 101.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1403) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 687864 sequences (100000174 bp) in 3.577 CPU sec, 3.963 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (34, 280758, 16, 34) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (225, 563, 1158) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3024) [M::mem_pestat] mean and std.dev: (600.17, 601.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3957) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (191, 296, 419) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 875) [M::mem_pestat] mean and std.dev: (315.55, 154.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1103) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (196, 523, 4463) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 12997) [M::mem_pestat] mean and std.dev: (2739.69, 3409.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 17264) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (240, 358, 662) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1506) [M::mem_pestat] mean and std.dev: (435.91, 224.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1928) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 687794 reads in 235.219 CPU sec, 7.677 real sec [M::process] read 687230 sequences (100000130 bp) in 2.543 CPU sec, 2.656 real sec... sorting block 3, #reads = 1071968 mem = 536877987 peak = 757276672 [M::mem_process_seqs] Processed 687750 reads in 162.094 CPU sec, 5.290 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (54, 280337, 14, 28) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (161, 426, 959) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2555) [M::mem_pestat] mean and std.dev: (480.43, 416.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3353) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (191, 297, 423) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 887) [M::mem_pestat] mean and std.dev: (317.98, 156.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1119) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (369, 589, 925) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2037) [M::mem_pestat] mean and std.dev: (495.23, 285.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2593) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (201, 376, 513) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1137) [M::mem_pestat] mean and std.dev: (380.96, 221.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1449) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 4, #reads = 1073391 mem = 536879572 peak = 792297472 [M::process] read 686534 sequences (100000226 bp) in 3.204 CPU sec, 3.501 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (36, 280641, 25, 31) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (221, 364, 1068) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2762) [M::mem_pestat] mean and std.dev: (772.42, 855.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4196) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (192, 298, 424) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 888) [M::mem_pestat] mean and std.dev: (319.14, 157.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1120) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (271, 1344, 5787) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 16819) [M::mem_pestat] mean and std.dev: (2213.68, 2433.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 22335) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (220, 263, 578) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1294) [M::mem_pestat] mean and std.dev: (303.96, 232.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1652) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 687864 reads in 233.660 CPU sec, 7.654 real sec [M::process] read 686196 sequences (100000212 bp) in 2.138 CPU sec, 2.206 real sec... [M::mem_process_seqs] Processed 687230 reads in 161.929 CPU sec, 5.322 real sec sorting block 5, #reads = 1071454 mem = 536881109 peak = 792297472 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (41, 279533, 4, 29) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (252, 442, 490) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 966) [M::mem_pestat] mean and std.dev: (394.66, 147.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1204) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (195, 303, 430) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 900) [M::mem_pestat] mean and std.dev: (323.27, 158.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1135) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (269, 450, 1005) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2477) [M::mem_pestat] mean and std.dev: (479.46, 409.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3213) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 686448 sequences (100000081 bp) in 3.477 CPU sec, 3.853 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (36, 280066, 8, 45) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (190, 588, 1205) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3235) [M::mem_pestat] mean and std.dev: (710.16, 716.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4250) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (196, 305, 432) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 904) [M::mem_pestat] mean and std.dev: (325.07, 159.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1140) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (160, 301, 550) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1330) [M::mem_pestat] mean and std.dev: (385.55, 305.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1720) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 686534 reads in 234.222 CPU sec, 7.630 real sec [M::mem_process_seqs] Processed 686196 reads in 163.730 CPU sec, 5.323 real sec [M::process] read 686092 sequences (100000185 bp) in 2.876 CPU sec, 2.985 real sec... sorting block 6, #reads = 1071312 mem = 536878973 peak = 792297472 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (30, 280087, 5, 31) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (159, 299, 1360) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3762) [M::mem_pestat] mean and std.dev: (555.33, 516.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4963) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (195, 302, 428) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 894) [M::mem_pestat] mean and std.dev: (322.59, 158.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1127) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (212, 265, 456) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 944) [M::mem_pestat] mean and std.dev: (298.46, 164.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1188) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 686254 sequences (100000073 bp) in 2.938 CPU sec, 3.270 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (24, 279723, 14, 51) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (329, 550, 1053) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2501) [M::mem_pestat] mean and std.dev: (624.39, 418.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3225) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (196, 303, 428) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 892) [M::mem_pestat] mean and std.dev: (322.91, 157.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1124) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (550, 550, 1235) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2605) [M::mem_pestat] mean and std.dev: (847.50, 514.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3290) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (195, 296, 574) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1332) [M::mem_pestat] mean and std.dev: (303.56, 162.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1711) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 686448 reads in 236.178 CPU sec, 7.702 real sec [M::process] read 686252 sequences (100000215 bp) in 2.383 CPU sec, 2.447 real sec... [M::mem_process_seqs] Processed 686092 reads in 162.467 CPU sec, 5.255 real sec sorting block 7, #reads = 1070728 mem = 536879571 peak = 792297472 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (42, 279521, 14, 25) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (221, 348, 600) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1358) [M::mem_pestat] mean and std.dev: (444.27, 331.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1770) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (196, 304, 429) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 895) [M::mem_pestat] mean and std.dev: (323.41, 157.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1128) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (571, 571, 708) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (297, 982) [M::mem_pestat] mean and std.dev: (639.20, 93.76) [M::mem_pestat] low and high boundaries for proper pairs: (160, 1119) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (265, 433, 1374) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3592) [M::mem_pestat] mean and std.dev: (695.08, 524.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4701) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 686492 sequences (100000055 bp) in 3.197 CPU sec, 3.469 real sec... sorting block 8, #reads = 1070813 mem = 536881020 peak = 792297472 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (38, 279774, 17, 54) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (144, 252, 365) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 807) [M::mem_pestat] mean and std.dev: (235.82, 111.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1028) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (196, 302, 427) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 889) [M::mem_pestat] mean and std.dev: (322.51, 157.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1120) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (205, 842, 1093) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2869) [M::mem_pestat] mean and std.dev: (709.06, 423.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3757) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (206, 290, 549) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1235) [M::mem_pestat] mean and std.dev: (295.09, 133.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1578) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 686254 reads in 235.336 CPU sec, 7.741 real sec [M::process] read 686708 sequences (100000119 bp) in 2.500 CPU sec, 2.532 real sec... [M::mem_process_seqs] Processed 686252 reads in 160.200 CPU sec, 5.286 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (24, 280204, 22, 29) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (167, 252, 378) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 800) [M::mem_pestat] mean and std.dev: (266.23, 118.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1011) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (195, 303, 431) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 903) [M::mem_pestat] mean and std.dev: (324.15, 159.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1139) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (38, 422, 846) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2462) [M::mem_pestat] mean and std.dev: (618.48, 708.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3452) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (176, 294, 583) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1397) [M::mem_pestat] mean and std.dev: (420.10, 344.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1804) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 9, #reads = 1070679 mem = 536884891 peak = 792297472 [M::process] read 686022 sequences (100000300 bp) in 3.026 CPU sec, 3.352 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (42, 279797, 3, 45) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (147, 262, 296) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 594) [M::mem_pestat] mean and std.dev: (217.25, 96.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 743) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (194, 299, 424) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 884) [M::mem_pestat] mean and std.dev: (320.05, 156.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1114) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (329, 422, 447) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (93, 683) [M::mem_pestat] mean and std.dev: (367.39, 118.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 842) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 686492 reads in 224.303 CPU sec, 7.231 real sec [M::process] read 685598 sequences (100000218 bp) in 2.421 CPU sec, 2.463 real sec... [M::mem_process_seqs] Processed 686708 reads in 157.267 CPU sec, 5.032 real sec sorting block 10, #reads = 1070624 mem = 536879285 peak = 792297472 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (27, 279629, 16, 41) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (159, 176, 468) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1086) [M::mem_pestat] mean and std.dev: (303.81, 201.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1395) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (197, 303, 428) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 890) [M::mem_pestat] mean and std.dev: (323.46, 157.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1121) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (319, 545, 837) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1873) [M::mem_pestat] mean and std.dev: (503.07, 313.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2391) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (275, 403, 515) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 995) [M::mem_pestat] mean and std.dev: (359.32, 128.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1235) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 685946 sequences (100000091 bp) in 3.483 CPU sec, 3.711 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (41, 279491, 18, 51) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (225, 257, 980) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2490) [M::mem_pestat] mean and std.dev: (520.02, 431.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3245) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (199, 307, 433) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 901) [M::mem_pestat] mean and std.dev: (326.18, 158.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1135) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (346, 735, 1047) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2449) [M::mem_pestat] mean and std.dev: (756.00, 435.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3150) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (197, 580, 757) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1877) [M::mem_pestat] mean and std.dev: (565.02, 399.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2437) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 686022 reads in 213.671 CPU sec, 6.853 real sec [M::process] read 684994 sequences (100000066 bp) in 2.200 CPU sec, 2.237 real sec... [M::mem_process_seqs] Processed 685598 reads in 143.610 CPU sec, 4.538 real sec sorting block 11, #reads = 1071421 mem = 536881669 peak = 792297472 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (42, 279267, 5, 33) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (190, 420, 599) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1417) [M::mem_pestat] mean and std.dev: (428.31, 299.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1826) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (196, 302, 427) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 889) [M::mem_pestat] mean and std.dev: (322.14, 156.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1120) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (182, 281, 506) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1154) [M::mem_pestat] mean and std.dev: (298.58, 151.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1478) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 685650 sequences (100000234 bp) in 2.967 CPU sec, 3.095 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (39, 279127, 13, 34) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (206, 253, 433) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 887) [M::mem_pestat] mean and std.dev: (276.45, 128.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1114) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (198, 305, 426) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 882) [M::mem_pestat] mean and std.dev: (323.36, 155.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1110) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (20, 99, 815) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2405) [M::mem_pestat] mean and std.dev: (404.54, 458.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3200) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (176, 205, 310) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 578) [M::mem_pestat] mean and std.dev: (226.13, 94.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 712) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 685572 sequences (100000301 bp) in 2.170 CPU sec, 2.173 real sec... [M::mem_process_seqs] Processed 685946 reads in 197.204 CPU sec, 6.254 real sec sorting block 12, #reads = 1070218 mem = 536876069 peak = 792297472 [M::mem_process_seqs] Processed 684994 reads in 133.586 CPU sec, 4.235 real sec sorting block 13, #reads = 1070198 mem = 536881746 peak = 849752064 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (24, 279043, 1, 37) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (209, 509, 667) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1583) [M::mem_pestat] mean and std.dev: (471.33, 343.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2041) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (197, 303, 427) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 887) [M::mem_pestat] mean and std.dev: (323.18, 156.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1117) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (242, 500, 535) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1121) [M::mem_pestat] mean and std.dev: (413.18, 207.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1414) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 685420 sequences (100000097 bp) in 2.710 CPU sec, 2.822 real sec... [M::process] read 685352 sequences (100000148 bp) in 1.820 CPU sec, 1.822 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (28, 279157, 3, 38) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (209, 349, 448) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 926) [M::mem_pestat] mean and std.dev: (328.35, 157.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1165) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (197, 301, 423) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 875) [M::mem_pestat] mean and std.dev: (320.39, 154.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1101) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (201, 407, 679) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1635) [M::mem_pestat] mean and std.dev: (429.53, 242.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2113) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 685650 reads in 187.912 CPU sec, 5.956 real sec [M::mem_process_seqs] Processed 685572 reads in 126.806 CPU sec, 4.032 real sec sorting block 14, #reads = 1070398 mem = 536881916 peak = 849752064 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (25, 279165, 10, 40) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (164, 305, 913) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2411) [M::mem_pestat] mean and std.dev: (539.32, 585.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3160) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (197, 302, 425) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 881) [M::mem_pestat] mean and std.dev: (321.50, 154.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1109) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (332, 570, 846) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1874) [M::mem_pestat] mean and std.dev: (487.88, 220.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2388) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (186, 202, 409) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 855) [M::mem_pestat] mean and std.dev: (262.86, 143.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1078) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 685480 sequences (100000143 bp) in 2.703 CPU sec, 2.764 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (31, 279421, 25, 35) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (186, 213, 304) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 540) [M::mem_pestat] mean and std.dev: (211.96, 86.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 658) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (198, 304, 425) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 879) [M::mem_pestat] mean and std.dev: (322.63, 155.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1106) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (525, 1807, 2408) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6174) [M::mem_pestat] mean and std.dev: (1444.52, 1033.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8057) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (192, 275, 369) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 723) [M::mem_pestat] mean and std.dev: (262.90, 80.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 900) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 686250 sequences (100000164 bp) in 2.220 CPU sec, 2.226 real sec... [M::mem_process_seqs] Processed 685420 reads in 187.212 CPU sec, 5.939 real sec [M::mem_process_seqs] Processed 685352 reads in 128.604 CPU sec, 4.056 real sec sorting block 15, #reads = 1069324 mem = 536877135 peak = 849752064 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (34, 279458, 11, 24) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (221, 281, 360) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 638) [M::mem_pestat] mean and std.dev: (273.17, 122.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 777) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (197, 303, 426) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 884) [M::mem_pestat] mean and std.dev: (322.49, 156.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1113) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (370, 504, 1379) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3397) [M::mem_pestat] mean and std.dev: (740.00, 646.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4406) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (162, 265, 500) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1176) [M::mem_pestat] mean and std.dev: (241.26, 114.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1514) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 685776 sequences (100000226 bp) in 2.890 CPU sec, 2.962 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (31, 279506, 5, 29) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (220, 264, 630) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1450) [M::mem_pestat] mean and std.dev: (361.41, 250.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1860) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (195, 298, 420) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 870) [M::mem_pestat] mean and std.dev: (318.15, 153.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1095) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (204, 233, 365) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 687) [M::mem_pestat] mean and std.dev: (260.00, 110.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 848) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 685526 sequences (100000217 bp) in 2.230 CPU sec, 2.232 real sec... [M::mem_process_seqs] Processed 685480 reads in 184.512 CPU sec, 5.826 real sec sorting block 16, #reads = 1068337 mem = 536880959 peak = 849752064 [M::mem_process_seqs] Processed 686250 reads in 125.791 CPU sec, 3.980 real sec sorting block 17, #reads = 1068228 mem = 536876656 peak = 849752064 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (50, 279779, 13, 27) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (158, 264, 388) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 848) [M::mem_pestat] mean and std.dev: (308.20, 186.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1078) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (196, 301, 423) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 877) [M::mem_pestat] mean and std.dev: (320.53, 155.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1104) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (331, 1199, 2815) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7783) [M::mem_pestat] mean and std.dev: (1242.31, 1002.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 10267) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (233, 346, 837) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2045) [M::mem_pestat] mean and std.dev: (510.83, 502.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2649) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 685462 sequences (100000007 bp) in 2.209 CPU sec, 2.278 real sec... [M::process] read 685682 sequences (100000288 bp) in 2.280 CPU sec, 2.275 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (33, 279229, 20, 36) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (236, 399, 1082) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2774) [M::mem_pestat] mean and std.dev: (471.86, 328.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3620) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (196, 301, 423) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 877) [M::mem_pestat] mean and std.dev: (320.85, 155.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1104) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (24, 1179, 2420) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7212) [M::mem_pestat] mean and std.dev: (1431.25, 1620.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9608) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (177, 219, 247) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (37, 387) [M::mem_pestat] mean and std.dev: (195.67, 55.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 457) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 685776 reads in 178.198 CPU sec, 5.640 real sec [M::mem_process_seqs] Processed 685526 reads in 122.259 CPU sec, 3.879 real sec sorting block 18, #reads = 1069067 mem = 536878144 peak = 849752064 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (33, 279551, 18, 26) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (183, 248, 1501) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4137) [M::mem_pestat] mean and std.dev: (600.55, 686.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5455) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (196, 302, 424) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 880) [M::mem_pestat] mean and std.dev: (321.28, 155.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1108) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (113, 832, 3155) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 9239) [M::mem_pestat] mean and std.dev: (1580.33, 1524.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 12281) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (142, 260, 300) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 616) [M::mem_pestat] mean and std.dev: (205.57, 71.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 774) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 685628 sequences (100000199 bp) in 2.907 CPU sec, 2.973 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (36, 279253, 15, 40) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (207, 337, 498) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1080) [M::mem_pestat] mean and std.dev: (338.44, 152.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1371) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (196, 301, 424) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 880) [M::mem_pestat] mean and std.dev: (321.00, 155.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1108) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (1115, 1912, 4020) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 9830) [M::mem_pestat] mean and std.dev: (2193.20, 1620.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 12735) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (189, 560, 585) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1377) [M::mem_pestat] mean and std.dev: (418.37, 275.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1773) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 685298 sequences (100000301 bp) in 2.300 CPU sec, 2.299 real sec... [M::mem_process_seqs] Processed 685462 reads in 174.694 CPU sec, 5.504 real sec [M::mem_process_seqs] Processed 685682 reads in 118.451 CPU sec, 3.744 real sec sorting block 19, #reads = 1069625 mem = 536881164 peak = 849752064 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (48, 279359, 9, 47) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (244, 418, 493) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 991) [M::mem_pestat] mean and std.dev: (384.54, 193.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1240) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (197, 302, 425) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 881) [M::mem_pestat] mean and std.dev: (322.11, 156.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1109) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (265, 545, 744) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1702) [M::mem_pestat] mean and std.dev: (506.17, 332.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2181) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 685042 sequences (100000046 bp) in 2.533 CPU sec, 2.604 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (33, 279655, 4, 46) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (205, 240, 529) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1177) [M::mem_pestat] mean and std.dev: (335.72, 195.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1501) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (198, 304, 430) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 894) [M::mem_pestat] mean and std.dev: (325.35, 158.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1126) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (272, 526, 919) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2213) [M::mem_pestat] mean and std.dev: (566.27, 358.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2860) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 684596 sequences (100000083 bp) in 2.210 CPU sec, 2.216 real sec... [M::mem_process_seqs] Processed 685628 reads in 178.712 CPU sec, 5.650 real sec sorting block 20, #reads = 1068518 mem = 536877314 peak = 849752064 [M::mem_process_seqs] Processed 685298 reads in 124.272 CPU sec, 3.930 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (51, 279500, 13, 36) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (168, 296, 411) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 897) [M::mem_pestat] mean and std.dev: (289.58, 177.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1140) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (199, 307, 435) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 907) [M::mem_pestat] mean and std.dev: (328.06, 160.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1143) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (48, 500, 861) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2487) [M::mem_pestat] mean and std.dev: (514.85, 504.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3300) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (246, 304, 494) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 990) [M::mem_pestat] mean and std.dev: (340.53, 188.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1238) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 687568 sequences (100000088 bp) in 2.751 CPU sec, 2.812 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (24, 278979, 6, 19) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (195, 273, 324) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 582) [M::mem_pestat] mean and std.dev: (245.64, 82.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 711) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (200, 309, 435) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 905) [M::mem_pestat] mean and std.dev: (328.65, 160.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1140) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (144, 204, 681) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1755) [M::mem_pestat] mean and std.dev: (245.38, 182.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2292) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 690446 sequences (100000245 bp) in 2.200 CPU sec, 2.201 real sec... [M::mem_process_seqs] Processed 685042 reads in 169.618 CPU sec, 5.348 real sec sorting block 21, #reads = 1068344 mem = 536877774 peak = 849752064 [M::mem_process_seqs] Processed 684596 reads in 115.701 CPU sec, 3.655 real sec sorting block 22, #reads = 1068920 mem = 536879054 peak = 940126208 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (31, 280029, 16, 32) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (190, 362, 556) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1288) [M::mem_pestat] mean and std.dev: (318.00, 169.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1654) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (191, 296, 422) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 884) [M::mem_pestat] mean and std.dev: (318.05, 157.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1115) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (8, 224, 1971) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5897) [M::mem_pestat] mean and std.dev: (344.54, 533.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7860) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (189, 320, 439) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 939) [M::mem_pestat] mean and std.dev: (282.33, 132.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1189) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 689774 sequences (100000185 bp) in 2.348 CPU sec, 2.404 real sec... [M::process] read 689094 sequences (100000117 bp) in 1.640 CPU sec, 1.636 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (36, 281227, 15, 34) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (151, 207, 361) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 781) [M::mem_pestat] mean and std.dev: (257.78, 164.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 991) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (182, 282, 403) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 845) [M::mem_pestat] mean and std.dev: (304.29, 151.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1066) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (52, 232, 1093) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3175) [M::mem_pestat] mean and std.dev: (494.79, 579.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4216) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (155, 370, 927) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2471) [M::mem_pestat] mean and std.dev: (478.00, 448.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3243) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 687568 reads in 166.834 CPU sec, 5.289 real sec [M::mem_process_seqs] Processed 690446 reads in 110.790 CPU sec, 3.516 real sec sorting block 23, #reads = 1070047 mem = 536880617 peak = 940126208 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (40, 281029, 15, 40) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (197, 303, 471) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1019) [M::mem_pestat] mean and std.dev: (365.49, 225.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1293) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (184, 286, 409) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 859) [M::mem_pestat] mean and std.dev: (308.11, 153.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1084) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (479, 510, 870) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1652) [M::mem_pestat] mean and std.dev: (618.00, 357.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2048) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (463, 591, 1121) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2437) [M::mem_pestat] mean and std.dev: (583.81, 356.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3095) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 688908 sequences (100000009 bp) in 2.572 CPU sec, 2.643 real sec... [M::process] read 688364 sequences (100000134 bp) in 1.660 CPU sec, 1.661 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (27, 280723, 10, 50) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (205, 205, 361) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 673) [M::mem_pestat] mean and std.dev: (256.65, 98.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 829) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (187, 289, 409) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 853) [M::mem_pestat] mean and std.dev: (309.72, 153.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1075) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (273, 1168, 1407) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3675) [M::mem_pestat] mean and std.dev: (1002.11, 634.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4809) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (139, 243, 317) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 673) [M::mem_pestat] mean and std.dev: (243.53, 105.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 851) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 689774 reads in 160.249 CPU sec, 5.070 real sec [M::mem_process_seqs] Processed 689094 reads in 107.442 CPU sec, 3.412 real sec sorting block 24, #reads = 1075238 mem = 536879632 peak = 940126208 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (36, 280536, 4, 33) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (230, 745, 1725) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4715) [M::mem_pestat] mean and std.dev: (1423.39, 1491.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7390) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (187, 290, 411) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 859) [M::mem_pestat] mean and std.dev: (310.56, 152.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1083) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (213, 337, 536) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1182) [M::mem_pestat] mean and std.dev: (386.06, 214.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1505) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 688230 sequences (100000266 bp) in 2.187 CPU sec, 2.237 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (25, 280565, 15, 28) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (197, 256, 377) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 737) [M::mem_pestat] mean and std.dev: (256.59, 118.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 917) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (189, 291, 410) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 852) [M::mem_pestat] mean and std.dev: (310.86, 152.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1073) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (586, 940, 1779) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4165) [M::mem_pestat] mean and std.dev: (1117.40, 522.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5358) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (263, 475, 2668) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7478) [M::mem_pestat] mean and std.dev: (1171.61, 1192.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9883) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 687726 sequences (100000170 bp) in 2.090 CPU sec, 2.088 real sec... [M::mem_process_seqs] Processed 688908 reads in 156.294 CPU sec, 4.945 real sec sorting block 25, #reads = 1075168 mem = 536876611 peak = 940126208 [M::mem_process_seqs] Processed 688364 reads in 106.308 CPU sec, 3.356 real sec sorting block 26, #reads = 1074261 mem = 536879589 peak = 940126208 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (27, 280379, 12, 28) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (128, 147, 287) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 605) [M::mem_pestat] mean and std.dev: (178.30, 90.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 764) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (190, 293, 413) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 859) [M::mem_pestat] mean and std.dev: (312.53, 152.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1082) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (323, 506, 1154) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2816) [M::mem_pestat] mean and std.dev: (620.50, 399.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3647) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (170, 227, 434) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 962) [M::mem_pestat] mean and std.dev: (285.42, 167.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1226) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 687534 sequences (100000094 bp) in 2.497 CPU sec, 2.585 real sec... [M::process] read 687498 sequences (100000063 bp) in 1.660 CPU sec, 1.660 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (54, 280467, 7, 44) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (163, 191, 251) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 427) [M::mem_pestat] mean and std.dev: (184.98, 55.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 515) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (191, 295, 416) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 866) [M::mem_pestat] mean and std.dev: (314.59, 153.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1091) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (217, 445, 669) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1573) [M::mem_pestat] mean and std.dev: (425.08, 258.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2025) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 688230 reads in 158.967 CPU sec, 5.032 real sec [M::mem_process_seqs] Processed 687726 reads in 106.141 CPU sec, 3.364 real sec sorting block 27, #reads = 1073886 mem = 536882651 peak = 940126208 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (31, 280104, 20, 51) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (182, 256, 585) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1391) [M::mem_pestat] mean and std.dev: (284.92, 160.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1794) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (192, 297, 418) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 870) [M::mem_pestat] mean and std.dev: (315.93, 153.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1096) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (212, 457, 1542) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4202) [M::mem_pestat] mean and std.dev: (755.35, 866.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5532) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (224, 365, 420) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 812) [M::mem_pestat] mean and std.dev: (325.89, 119.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1008) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 687144 sequences (100000171 bp) in 2.167 CPU sec, 2.218 real sec... [M::process] read 687440 sequences (100000059 bp) in 1.680 CPU sec, 1.678 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (25, 280316, 18, 30) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (183, 320, 351) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 687) [M::mem_pestat] mean and std.dev: (273.08, 99.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 855) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (192, 298, 419) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 873) [M::mem_pestat] mean and std.dev: (316.82, 154.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1100) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (96, 1297, 2780) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 8148) [M::mem_pestat] mean and std.dev: (2022.89, 2333.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 11357) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (226, 289, 584) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1300) [M::mem_pestat] mean and std.dev: (319.19, 171.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1658) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 687534 reads in 151.075 CPU sec, 4.785 real sec [M::mem_process_seqs] Processed 687498 reads in 101.381 CPU sec, 3.215 real sec sorting block 28, #reads = 1072606 mem = 536879839 peak = 940126208 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (39, 280302, 15, 50) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (175, 416, 637) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1561) [M::mem_pestat] mean and std.dev: (355.86, 195.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2023) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (193, 299, 421) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 877) [M::mem_pestat] mean and std.dev: (318.02, 155.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1105) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (239, 682, 2382) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6668) [M::mem_pestat] mean and std.dev: (932.21, 820.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8811) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (148, 245, 395) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 889) [M::mem_pestat] mean and std.dev: (270.85, 161.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1136) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 686906 sequences (100000051 bp) in 2.368 CPU sec, 2.426 real sec... [M::process] read 686490 sequences (100000231 bp) in 1.690 CPU sec, 1.690 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (34, 280306, 9, 48) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (160, 267, 417) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 931) [M::mem_pestat] mean and std.dev: (257.55, 124.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1188) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (192, 299, 423) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 885) [M::mem_pestat] mean and std.dev: (318.31, 155.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1116) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (243, 360, 1012) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2550) [M::mem_pestat] mean and std.dev: (643.87, 471.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3319) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 687144 reads in 154.043 CPU sec, 4.875 real sec sorting block 29, #reads = 1073461 mem = 536887469 peak = 940126208 [M::mem_process_seqs] Processed 687440 reads in 103.723 CPU sec, 3.287 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (31, 280143, 12, 32) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (167, 317, 556) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1334) [M::mem_pestat] mean and std.dev: (287.65, 154.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1723) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (194, 302, 425) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 887) [M::mem_pestat] mean and std.dev: (320.57, 156.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1118) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (201, 413, 842) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2124) [M::mem_pestat] mean and std.dev: (523.58, 465.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2765) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (236, 400, 591) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1301) [M::mem_pestat] mean and std.dev: (360.92, 176.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1656) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 686532 sequences (100000068 bp) in 2.198 CPU sec, 2.257 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (34, 279620, 12, 34) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (261, 288, 533) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1077) [M::mem_pestat] mean and std.dev: (383.06, 242.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1352) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (195, 302, 424) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 882) [M::mem_pestat] mean and std.dev: (320.75, 155.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1111) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (469, 521, 2473) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6481) [M::mem_pestat] mean and std.dev: (1075.33, 1117.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8485) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (242, 402, 1232) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3212) [M::mem_pestat] mean and std.dev: (826.97, 915.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4490) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 686454 sequences (100000189 bp) in 1.770 CPU sec, 1.761 real sec... [M::mem_process_seqs] Processed 686906 reads in 154.776 CPU sec, 4.908 real sec sorting block 30, #reads = 1072883 mem = 536881048 peak = 940126208 [M::mem_process_seqs] Processed 686490 reads in 104.258 CPU sec, 3.301 real sec sorting block 31, #reads = 1072103 mem = 536886750 peak = 1021460480 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (42, 280123, 14, 41) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (220, 357, 2101) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5863) [M::mem_pestat] mean and std.dev: (1076.14, 1337.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7744) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (195, 303, 426) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 888) [M::mem_pestat] mean and std.dev: (321.97, 157.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1119) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (422, 3322, 5952) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 17012) [M::mem_pestat] mean and std.dev: (3385.07, 3327.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 22542) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (229, 674, 1243) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3271) [M::mem_pestat] mean and std.dev: (691.90, 526.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4285) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 686010 sequences (100000142 bp) in 2.580 CPU sec, 2.628 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (36, 279887, 6, 63) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (173, 293, 351) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 707) [M::mem_pestat] mean and std.dev: (281.17, 138.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 885) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (196, 304, 427) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 889) [M::mem_pestat] mean and std.dev: (322.72, 157.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1120) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (182, 309, 584) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1388) [M::mem_pestat] mean and std.dev: (384.07, 284.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1790) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 685982 sequences (100000020 bp) in 1.710 CPU sec, 1.707 real sec... [M::mem_process_seqs] Processed 686532 reads in 152.214 CPU sec, 4.812 real sec [M::mem_process_seqs] Processed 686454 reads in 102.089 CPU sec, 3.231 real sec sorting block 32, #reads = 1071793 mem = 536879142 peak = 1021460480 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (44, 279539, 23, 51) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (174, 275, 493) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1131) [M::mem_pestat] mean and std.dev: (326.00, 217.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1450) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (197, 304, 426) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 884) [M::mem_pestat] mean and std.dev: (322.71, 156.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1113) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (389, 541, 1700) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4322) [M::mem_pestat] mean and std.dev: (841.82, 754.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5633) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (179, 290, 629) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1529) [M::mem_pestat] mean and std.dev: (388.79, 312.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1979) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 685978 sequences (100000298 bp) in 2.197 CPU sec, 2.259 real sec... [M::process] read 685312 sequences (100000177 bp) in 1.620 CPU sec, 1.618 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (25, 279482, 10, 37) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (168, 330, 515) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1209) [M::mem_pestat] mean and std.dev: (303.14, 148.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1556) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (196, 305, 427) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 889) [M::mem_pestat] mean and std.dev: (322.64, 155.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1120) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (445, 1961, 1961) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4993) [M::mem_pestat] mean and std.dev: (1638.70, 1109.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6509) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (256, 381, 532) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1084) [M::mem_pestat] mean and std.dev: (352.66, 165.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1360) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 686010 reads in 151.703 CPU sec, 4.807 real sec sorting block 33, #reads = 1070773 mem = 536879543 peak = 1021460480 [M::mem_process_seqs] Processed 685982 reads in 101.665 CPU sec, 3.222 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (47, 280183, 13, 41) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (166, 240, 512) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1204) [M::mem_pestat] mean and std.dev: (326.72, 204.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1550) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (197, 307, 430) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 896) [M::mem_pestat] mean and std.dev: (325.12, 158.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1129) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (709, 1098, 2360) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5662) [M::mem_pestat] mean and std.dev: (1536.75, 1360.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7313) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (193, 492, 620) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1474) [M::mem_pestat] mean and std.dev: (379.91, 289.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1901) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 686036 sequences (100000154 bp) in 2.343 CPU sec, 2.395 real sec... [M::process] read 685982 sequences (100000085 bp) in 1.610 CPU sec, 1.619 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (34, 279841, 13, 34) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (185, 250, 406) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 848) [M::mem_pestat] mean and std.dev: (317.21, 189.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1076) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (198, 304, 423) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 873) [M::mem_pestat] mean and std.dev: (322.01, 154.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1098) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (368, 1043, 2217) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5915) [M::mem_pestat] mean and std.dev: (1245.67, 1294.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7764) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (148, 360, 608) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1528) [M::mem_pestat] mean and std.dev: (332.31, 210.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1988) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 685978 reads in 146.839 CPU sec, 4.646 real sec sorting block 34, #reads = 1071247 mem = 536882686 peak = 1021460480 [M::mem_process_seqs] Processed 685312 reads in 98.188 CPU sec, 3.114 real sec sorting block 35, #reads = 1071175 mem = 536883123 peak = 1021460480 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (46, 280294, 5, 34) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (163, 432, 1598) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4468) [M::mem_pestat] mean and std.dev: (703.96, 636.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5903) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (197, 302, 424) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 878) [M::mem_pestat] mean and std.dev: (320.99, 155.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1105) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (207, 361, 387) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 747) [M::mem_pestat] mean and std.dev: (338.69, 153.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 952) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 685534 sequences (100000258 bp) in 2.190 CPU sec, 2.231 real sec... [M::process] read 685302 sequences (100000150 bp) in 1.620 CPU sec, 1.621 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (36, 280382, 5, 38) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (168, 253, 699) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1761) [M::mem_pestat] mean and std.dev: (402.77, 321.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2292) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (197, 304, 429) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 893) [M::mem_pestat] mean and std.dev: (323.43, 157.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1125) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (184, 295, 340) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 652) [M::mem_pestat] mean and std.dev: (264.36, 112.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 808) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 686036 reads in 152.740 CPU sec, 5.049 real sec [M::mem_process_seqs] Processed 685982 reads in 100.487 CPU sec, 3.184 real sec sorting block 36, #reads = 1070933 mem = 536878874 peak = 1021460480 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (35, 279670, 5, 41) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (211, 378, 595) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1363) [M::mem_pestat] mean and std.dev: (394.19, 264.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1747) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (198, 306, 430) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 894) [M::mem_pestat] mean and std.dev: (324.61, 157.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1126) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (217, 376, 542) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1192) [M::mem_pestat] mean and std.dev: (382.66, 186.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1517) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 685314 sequences (100000146 bp) in 2.173 CPU sec, 2.224 real sec... [M::process] read 686286 sequences (100000088 bp) in 1.700 CPU sec, 1.697 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (24, 278894, 9, 28) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (279, 403, 1175) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2967) [M::mem_pestat] mean and std.dev: (655.38, 524.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3863) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (199, 305, 425) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 877) [M::mem_pestat] mean and std.dev: (322.84, 155.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1103) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (222, 267, 618) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1410) [M::mem_pestat] mean and std.dev: (343.04, 276.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1806) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 685534 reads in 148.707 CPU sec, 4.705 real sec [M::mem_process_seqs] Processed 685302 reads in 100.597 CPU sec, 3.189 real sec sorting block 37, #reads = 1070680 mem = 536880507 peak = 1021460480 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (39, 279510, 9, 49) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (157, 215, 332) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 682) [M::mem_pestat] mean and std.dev: (222.88, 93.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 857) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (199, 307, 430) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 892) [M::mem_pestat] mean and std.dev: (325.36, 157.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1123) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (214, 392, 572) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1288) [M::mem_pestat] mean and std.dev: (378.11, 214.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1646) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 686028 sequences (100000155 bp) in 2.225 CPU sec, 2.270 real sec... [M::process] read 685422 sequences (100000128 bp) in 1.620 CPU sec, 1.621 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (29, 280024, 18, 41) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (188, 249, 1382) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3770) [M::mem_pestat] mean and std.dev: (600.93, 586.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4964) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (195, 299, 424) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 882) [M::mem_pestat] mean and std.dev: (319.74, 156.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1111) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (396, 1073, 1505) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3723) [M::mem_pestat] mean and std.dev: (1231.61, 1055.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5454) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (188, 282, 1194) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3206) [M::mem_pestat] mean and std.dev: (603.15, 638.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4212) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 685314 reads in 150.338 CPU sec, 4.762 real sec sorting block 38, #reads = 1070064 mem = 536878219 peak = 1021460480 [M::mem_process_seqs] Processed 686286 reads in 100.691 CPU sec, 3.186 real sec sorting block 39, #reads = 1070440 mem = 536882973 peak = 1022599168 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (53, 279584, 14, 31) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (164, 286, 388) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 836) [M::mem_pestat] mean and std.dev: (248.72, 92.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1060) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (195, 300, 424) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 882) [M::mem_pestat] mean and std.dev: (320.52, 156.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1111) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (739, 2320, 3403) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 8731) [M::mem_pestat] mean and std.dev: (2195.21, 1503.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 11395) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (213, 309, 450) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 924) [M::mem_pestat] mean and std.dev: (332.87, 144.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1161) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 685678 sequences (100000047 bp) in 2.412 CPU sec, 2.460 real sec... [M::process] read 685772 sequences (100000085 bp) in 1.660 CPU sec, 1.655 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (40, 279122, 14, 54) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (139, 241, 474) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1144) [M::mem_pestat] mean and std.dev: (326.43, 257.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1479) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (198, 304, 428) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 888) [M::mem_pestat] mean and std.dev: (323.82, 156.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1118) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (33, 1411, 3114) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 9276) [M::mem_pestat] mean and std.dev: (2536.79, 2974.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 14434) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (239, 302, 441) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 845) [M::mem_pestat] mean and std.dev: (308.17, 103.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1047) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 686028 reads in 152.610 CPU sec, 4.832 real sec [M::mem_process_seqs] Processed 685422 reads in 102.603 CPU sec, 3.252 real sec sorting block 40, #reads = 1069714 mem = 536877411 peak = 1022599168 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (23, 279441, 9, 25) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (211, 310, 462) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 964) [M::mem_pestat] mean and std.dev: (319.76, 207.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1215) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (196, 301, 423) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 877) [M::mem_pestat] mean and std.dev: (321.22, 155.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1104) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (211, 264, 340) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 598) [M::mem_pestat] mean and std.dev: (261.18, 93.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 727) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 685200 sequences (100000014 bp) in 2.156 CPU sec, 2.204 real sec... [M::process] read 685584 sequences (100000266 bp) in 1.630 CPU sec, 1.625 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (22, 279763, 11, 28) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (246, 417, 620) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1368) [M::mem_pestat] mean and std.dev: (413.43, 265.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1742) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (196, 302, 425) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 883) [M::mem_pestat] mean and std.dev: (321.47, 156.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1112) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (565, 858, 1779) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4207) [M::mem_pestat] mean and std.dev: (919.30, 605.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5421) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (160, 203, 959) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2557) [M::mem_pestat] mean and std.dev: (415.77, 433.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3356) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 685678 reads in 150.495 CPU sec, 4.770 real sec [M::mem_process_seqs] Processed 685772 reads in 100.676 CPU sec, 3.192 real sec sorting block 41, #reads = 1069681 mem = 536879981 peak = 1022599168 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (59, 279477, 14, 35) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (221, 481, 1169) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3065) [M::mem_pestat] mean and std.dev: (375.40, 249.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4013) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (197, 304, 428) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 890) [M::mem_pestat] mean and std.dev: (323.72, 157.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1121) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (787, 1477, 5415) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 14671) [M::mem_pestat] mean and std.dev: (2932.29, 2758.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 19299) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (193, 289, 450) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 964) [M::mem_pestat] mean and std.dev: (333.85, 188.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1221) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 685488 sequences (100000222 bp) in 2.316 CPU sec, 2.374 real sec... [M::process] read 685604 sequences (100000079 bp) in 1.660 CPU sec, 1.659 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (37, 279520, 13, 21) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (177, 336, 420) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 906) [M::mem_pestat] mean and std.dev: (289.67, 146.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1149) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (197, 301, 424) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 878) [M::mem_pestat] mean and std.dev: (321.39, 156.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1105) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (389, 738, 2479) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6659) [M::mem_pestat] mean and std.dev: (1094.00, 995.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8749) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (287, 402, 553) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1085) [M::mem_pestat] mean and std.dev: (411.55, 154.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1351) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 685200 reads in 152.399 CPU sec, 4.823 real sec sorting block 42, #reads = 1069868 mem = 536877348 peak = 1022599168 [M::mem_process_seqs] Processed 685584 reads in 102.010 CPU sec, 3.241 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (33, 279172, 28, 38) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (125, 197, 282) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 596) [M::mem_pestat] mean and std.dev: (205.43, 104.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 753) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (197, 301, 424) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 878) [M::mem_pestat] mean and std.dev: (321.24, 155.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1105) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (224, 290, 990) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2522) [M::mem_pestat] mean and std.dev: (318.09, 289.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3288) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (226, 353, 477) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 979) [M::mem_pestat] mean and std.dev: (367.50, 163.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1230) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 685456 sequences (100000127 bp) in 2.085 CPU sec, 2.124 real sec... [M::process] read 685568 sequences (100000066 bp) in 1.630 CPU sec, 1.635 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (37, 279080, 12, 40) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (213, 285, 395) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 759) [M::mem_pestat] mean and std.dev: (288.15, 112.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 941) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (198, 304, 428) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 888) [M::mem_pestat] mean and std.dev: (324.31, 157.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1118) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (703, 961, 1073) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1813) [M::mem_pestat] mean and std.dev: (897.75, 200.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2183) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (237, 287, 418) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 780) [M::mem_pestat] mean and std.dev: (288.48, 108.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 961) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 685488 reads in 150.879 CPU sec, 4.785 real sec sorting block 43, #reads = 1069409 mem = 536880171 peak = 1022599168 [M::process] read 685270 sequences (100000051 bp) in 1.759 CPU sec, 1.762 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (30, 280296, 7, 45) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (157, 278, 600) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1486) [M::mem_pestat] mean and std.dev: (257.26, 165.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1929) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (197, 305, 431) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 899) [M::mem_pestat] mean and std.dev: (325.86, 159.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1133) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (201, 280, 1190) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3168) [M::mem_pestat] mean and std.dev: (589.08, 674.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4157) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 685456 reads in 88.434 CPU sec, 3.022 real sec sorting block 44, #reads = 1069669 mem = 536880453 peak = 1022599168 [M::mem_process_seqs] Processed 685604 reads in 212.673 CPU sec, 6.972 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (47, 279880, 17, 38) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (207, 309, 1100) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2886) [M::mem_pestat] mean and std.dev: (559.27, 503.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3779) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (197, 305, 433) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 905) [M::mem_pestat] mean and std.dev: (326.57, 160.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1141) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (48, 437, 622) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1770) [M::mem_pestat] mean and std.dev: (363.82, 256.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2344) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (192, 303, 409) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 843) [M::mem_pestat] mean and std.dev: (325.51, 195.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1109) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 687054 sequences (100000015 bp) in 1.996 CPU sec, 2.061 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (23, 279861, 11, 21) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (219, 485, 1485) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4017) [M::mem_pestat] mean and std.dev: (932.26, 822.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5283) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (198, 307, 437) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 915) [M::mem_pestat] mean and std.dev: (329.06, 162.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1154) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (168, 208, 833) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2163) [M::mem_pestat] mean and std.dev: (296.67, 263.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2828) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (153, 201, 265) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 489) [M::mem_pestat] mean and std.dev: (218.74, 93.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 601) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 690524 sequences (100000202 bp) in 1.570 CPU sec, 1.568 real sec... [M::mem_process_seqs] Processed 685568 reads in 161.870 CPU sec, 5.136 real sec sorting block 45, #reads = 1069440 mem = 536876965 peak = 1022599168 [M::mem_process_seqs] Processed 685270 reads in 98.194 CPU sec, 3.110 real sec sorting block 46, #reads = 1069414 mem = 536879804 peak = 1022599168 [M::process] read 689690 sequences (100000134 bp) in 2.871 CPU sec, 3.074 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (26, 281159, 10, 39) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (211, 254, 349) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 625) [M::mem_pestat] mean and std.dev: (291.35, 130.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 815) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (183, 283, 401) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 837) [M::mem_pestat] mean and std.dev: (303.61, 150.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1055) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (486, 1214, 2023) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5097) [M::mem_pestat] mean and std.dev: (1203.90, 683.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6634) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (229, 405, 495) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1027) [M::mem_pestat] mean and std.dev: (428.67, 222.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1320) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 690524 reads in 85.219 CPU sec, 2.680 real sec [M::process] read 688852 sequences (100000159 bp) in 1.840 CPU sec, 1.855 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (24, 280611, 12, 32) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (213, 384, 996) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2562) [M::mem_pestat] mean and std.dev: (520.36, 445.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3345) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (193, 299, 425) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 889) [M::mem_pestat] mean and std.dev: (321.00, 159.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1121) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (285, 649, 2226) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6108) [M::mem_pestat] mean and std.dev: (977.25, 1019.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8049) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (194, 327, 525) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1187) [M::mem_pestat] mean and std.dev: (314.10, 149.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1518) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (34, 281102, 8, 39) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (159, 212, 626) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1560) [M::mem_pestat] mean and std.dev: (357.66, 308.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2027) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (185, 287, 408) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 854) [M::mem_pestat] mean and std.dev: (307.98, 152.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1077) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (185, 320, 527) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1211) [M::mem_pestat] mean and std.dev: (294.48, 196.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1553) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 688300 sequences (100000222 bp) in 1.623 CPU sec, 1.627 real sec... [M::mem_process_seqs] Processed 687054 reads in 233.445 CPU sec, 7.386 real sec sorting block 47, #reads = 1072104 mem = 536879378 peak = 1022599168 [M::mem_process_seqs] Processed 689690 reads in 119.042 CPU sec, 3.784 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (39, 280324, 14, 34) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (154, 401, 727) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1873) [M::mem_pestat] mean and std.dev: (324.16, 213.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2446) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (188, 289, 410) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 854) [M::mem_pestat] mean and std.dev: (309.96, 152.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1076) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (530, 2162, 9115) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 26285) [M::mem_pestat] mean and std.dev: (4059.86, 3883.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 34870) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (139, 223, 311) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 655) [M::mem_pestat] mean and std.dev: (226.03, 93.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 827) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 48, #reads = 1072277 mem = 536885146 peak = 1028915200 [M::process] read 688258 sequences (100000071 bp) in 2.233 CPU sec, 2.305 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (34, 281182, 7, 25) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (149, 245, 794) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2084) [M::mem_pestat] mean and std.dev: (376.57, 393.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2729) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (189, 292, 412) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 858) [M::mem_pestat] mean and std.dev: (311.84, 152.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1081) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (164, 253, 353) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 731) [M::mem_pestat] mean and std.dev: (235.27, 88.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 920) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 687940 sequences (100000155 bp) in 1.610 CPU sec, 1.610 real sec... [M::mem_process_seqs] Processed 688852 reads in 148.485 CPU sec, 4.711 real sec [M::mem_process_seqs] Processed 688300 reads in 100.009 CPU sec, 3.170 real sec sorting block 49, #reads = 1073631 mem = 536877974 peak = 1028915200 [M::process] read 687564 sequences (100000021 bp) in 2.342 CPU sec, 2.433 real sec... [M::process] read 687142 sequences (100000267 bp) in 1.580 CPU sec, 1.579 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (42, 280994, 14, 27) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (142, 227, 499) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1213) [M::mem_pestat] mean and std.dev: (305.51, 216.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1570) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (191, 295, 415) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 863) [M::mem_pestat] mean and std.dev: (314.14, 153.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1087) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (184, 352, 604) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1444) [M::mem_pestat] mean and std.dev: (479.00, 375.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1981) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (142, 348, 1169) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3223) [M::mem_pestat] mean and std.dev: (575.00, 564.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4250) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 687940 reads in 84.132 CPU sec, 2.667 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 281032, 6, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (184, 367, 687) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1693) [M::mem_pestat] mean and std.dev: (463.86, 368.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2196) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (189, 293, 412) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 858) [M::mem_pestat] mean and std.dev: (312.08, 152.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1081) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (169, 320, 642) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1588) [M::mem_pestat] mean and std.dev: (496.94, 420.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2180) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (43, 280198, 10, 30) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (173, 271, 656) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1622) [M::mem_pestat] mean and std.dev: (373.45, 313.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2105) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (191, 296, 416) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 866) [M::mem_pestat] mean and std.dev: (315.12, 153.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1091) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (18, 458, 1610) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4794) [M::mem_pestat] mean and std.dev: (353.00, 508.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6386) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (197, 342, 971) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2519) [M::mem_pestat] mean and std.dev: (371.30, 264.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3293) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 686980 sequences (100000301 bp) in 1.754 CPU sec, 1.762 real sec... [M::mem_process_seqs] Processed 688258 reads in 226.866 CPU sec, 7.187 real sec sorting block 50, #reads = 1072932 mem = 536881747 peak = 1028915200 [M::mem_process_seqs] Processed 687564 reads in 115.673 CPU sec, 3.686 real sec sorting block 51, #reads = 1071312 mem = 536883153 peak = 1079623680 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (31, 280193, 18, 31) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (147, 266, 834) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2208) [M::mem_pestat] mean and std.dev: (620.97, 605.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3045) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (193, 299, 421) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 877) [M::mem_pestat] mean and std.dev: (318.23, 155.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1105) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (61, 239, 764) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2170) [M::mem_pestat] mean and std.dev: (511.11, 604.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2930) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (251, 254, 779) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1835) [M::mem_pestat] mean and std.dev: (390.10, 271.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2363) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 686676 sequences (100000248 bp) in 2.098 CPU sec, 2.181 real sec... [M::process] read 686898 sequences (100000233 bp) in 1.610 CPU sec, 1.606 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (33, 280211, 12, 38) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (229, 285, 490) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1012) [M::mem_pestat] mean and std.dev: (352.45, 218.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1273) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (194, 300, 422) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 878) [M::mem_pestat] mean and std.dev: (319.01, 155.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1106) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (978, 1746, 3743) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 9273) [M::mem_pestat] mean and std.dev: (1956.92, 1436.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 12038) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (236, 301, 317) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (74, 479) [M::mem_pestat] mean and std.dev: (266.06, 83.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 599) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 687142 reads in 147.816 CPU sec, 4.688 real sec [M::mem_process_seqs] Processed 686980 reads in 100.025 CPU sec, 3.174 real sec sorting block 52, #reads = 1072149 mem = 536884080 peak = 1079623680 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (34, 279754, 8, 33) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (227, 374, 598) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1340) [M::mem_pestat] mean and std.dev: (433.71, 267.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1711) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (194, 301, 423) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 881) [M::mem_pestat] mean and std.dev: (320.05, 156.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1110) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (177, 403, 1055) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2811) [M::mem_pestat] mean and std.dev: (567.35, 498.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3689) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 686462 sequences (100000152 bp) in 2.575 CPU sec, 2.771 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (52, 280692, 17, 22) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (222, 293, 702) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1662) [M::mem_pestat] mean and std.dev: (466.27, 386.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2142) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (195, 303, 426) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 888) [M::mem_pestat] mean and std.dev: (321.65, 157.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1119) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (390, 506, 1266) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3018) [M::mem_pestat] mean and std.dev: (552.00, 377.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3894) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (155, 413, 952) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2546) [M::mem_pestat] mean and std.dev: (719.64, 746.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3707) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 686446 sequences (100000234 bp) in 1.630 CPU sec, 1.634 real sec... [M::mem_process_seqs] Processed 686676 reads in 149.516 CPU sec, 4.733 real sec sorting block 53, #reads = 1071994 mem = 536878229 peak = 1079623680 [M::mem_process_seqs] Processed 686898 reads in 99.585 CPU sec, 3.151 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (34, 280497, 16, 44) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (137, 368, 458) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1100) [M::mem_pestat] mean and std.dev: (331.79, 158.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1421) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (196, 304, 430) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 898) [M::mem_pestat] mean and std.dev: (324.12, 158.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1132) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (324, 802, 4745) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 13587) [M::mem_pestat] mean and std.dev: (2256.56, 2570.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 18008) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (273, 381, 450) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 804) [M::mem_pestat] mean and std.dev: (301.57, 93.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 981) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 686000 sequences (100000037 bp) in 2.024 CPU sec, 2.083 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (34, 280069, 17, 36) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (221, 314, 611) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1391) [M::mem_pestat] mean and std.dev: (370.53, 214.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1781) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (196, 305, 431) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 901) [M::mem_pestat] mean and std.dev: (324.37, 158.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1136) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (667, 1189, 2439) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5983) [M::mem_pestat] mean and std.dev: (1342.82, 955.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7755) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (242, 426, 1292) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3392) [M::mem_pestat] mean and std.dev: (768.58, 756.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4442) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 685730 sequences (100000031 bp) in 1.620 CPU sec, 1.621 real sec... [M::mem_process_seqs] Processed 686462 reads in 144.837 CPU sec, 4.594 real sec sorting block 54, #reads = 1072226 mem = 536879223 peak = 1079623680 [M::mem_process_seqs] Processed 686446 reads in 99.079 CPU sec, 3.140 real sec sorting block 55, #reads = 1073216 mem = 536886236 peak = 1079623680 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (34, 279704, 10, 34) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (155, 265, 358) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 764) [M::mem_pestat] mean and std.dev: (256.07, 130.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 967) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (197, 306, 429) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 893) [M::mem_pestat] mean and std.dev: (324.55, 158.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1125) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (228, 563, 4319) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 12501) [M::mem_pestat] mean and std.dev: (1927.40, 2573.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 16592) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (310, 428, 1476) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3808) [M::mem_pestat] mean and std.dev: (776.27, 747.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4974) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 685620 sequences (100000001 bp) in 2.336 CPU sec, 2.408 real sec... [M::process] read 685592 sequences (100000055 bp) in 1.625 CPU sec, 1.636 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (41, 280411, 9, 28) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (185, 267, 372) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 746) [M::mem_pestat] mean and std.dev: (305.87, 155.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 933) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (199, 307, 431) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 895) [M::mem_pestat] mean and std.dev: (326.28, 159.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1127) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (212, 318, 626) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1454) [M::mem_pestat] mean and std.dev: (392.46, 227.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1868) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 686000 reads in 148.444 CPU sec, 4.697 real sec [M::mem_process_seqs] Processed 685730 reads in 99.493 CPU sec, 3.153 real sec sorting block 56, #reads = 1071821 mem = 536879744 peak = 1079623680 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (43, 279671, 12, 36) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (188, 310, 2122) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5990) [M::mem_pestat] mean and std.dev: (1037.42, 1217.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7924) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (198, 307, 430) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 894) [M::mem_pestat] mean and std.dev: (325.61, 158.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1126) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (5, 78, 725) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2165) [M::mem_pestat] mean and std.dev: (415.25, 562.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2885) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (257, 450, 2590) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7256) [M::mem_pestat] mean and std.dev: (1066.66, 1229.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9589) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 685346 sequences (100000231 bp) in 2.110 CPU sec, 2.162 real sec... [M::process] read 685204 sequences (100000178 bp) in 1.600 CPU sec, 1.609 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (42, 279318, 19, 38) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (172, 251, 925) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2431) [M::mem_pestat] mean and std.dev: (544.24, 553.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3184) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (198, 307, 431) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 897) [M::mem_pestat] mean and std.dev: (325.51, 158.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1130) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (409, 567, 687) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1243) [M::mem_pestat] mean and std.dev: (429.12, 250.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1521) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (179, 265, 461) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1025) [M::mem_pestat] mean and std.dev: (287.94, 136.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1307) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 685620 reads in 149.048 CPU sec, 4.726 real sec [M::mem_process_seqs] Processed 685592 reads in 101.455 CPU sec, 3.216 real sec sorting block 57, #reads = 1071328 mem = 536879806 peak = 1079623680 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (48, 279433, 5, 20) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (172, 466, 1331) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3649) [M::mem_pestat] mean and std.dev: (391.34, 353.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4808) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (199, 308, 431) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 895) [M::mem_pestat] mean and std.dev: (326.70, 158.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1127) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (140, 287, 976) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2648) [M::mem_pestat] mean and std.dev: (517.10, 522.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3484) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 684996 sequences (100000064 bp) in 2.389 CPU sec, 2.463 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (31, 279311, 16, 45) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (161, 237, 837) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2189) [M::mem_pestat] mean and std.dev: (386.82, 379.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2865) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (199, 308, 434) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 904) [M::mem_pestat] mean and std.dev: (327.53, 159.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1139) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (290, 570, 1800) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4820) [M::mem_pestat] mean and std.dev: (987.38, 1052.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6330) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (186, 217, 891) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2301) [M::mem_pestat] mean and std.dev: (444.36, 486.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3006) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 685534 sequences (100000066 bp) in 1.820 CPU sec, 1.814 real sec... [M::mem_process_seqs] Processed 685346 reads in 150.629 CPU sec, 4.761 real sec sorting block 58, #reads = 1071044 mem = 536879729 peak = 1079623680 [M::mem_process_seqs] Processed 685204 reads in 101.760 CPU sec, 3.227 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (33, 279054, 6, 58) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (215, 308, 1116) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2918) [M::mem_pestat] mean and std.dev: (444.90, 410.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3819) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (200, 307, 430) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 890) [M::mem_pestat] mean and std.dev: (325.68, 157.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1120) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (227, 410, 858) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2120) [M::mem_pestat] mean and std.dev: (580.60, 500.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2751) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 685696 sequences (100000236 bp) in 2.138 CPU sec, 2.196 real sec... [M::process] read 685310 sequences (100000280 bp) in 1.630 CPU sec, 1.637 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (34, 280028, 9, 41) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (134, 256, 495) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1217) [M::mem_pestat] mean and std.dev: (267.32, 199.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1578) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (198, 302, 424) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 876) [M::mem_pestat] mean and std.dev: (321.73, 155.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1102) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (216, 288, 369) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 675) [M::mem_pestat] mean and std.dev: (275.37, 103.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 828) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 684996 reads in 150.171 CPU sec, 4.761 real sec sorting block 59, #reads = 1070670 mem = 536879243 peak = 1079623680 [M::mem_process_seqs] Processed 685534 reads in 101.227 CPU sec, 3.213 real sec sorting block 60, #reads = 1070446 mem = 536879075 peak = 1118867456 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (31, 279176, 13, 38) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (209, 251, 377) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 713) [M::mem_pestat] mean and std.dev: (281.64, 161.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 928) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (197, 304, 428) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 890) [M::mem_pestat] mean and std.dev: (323.63, 158.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1121) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (186, 698, 899) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2325) [M::mem_pestat] mean and std.dev: (522.67, 414.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3038) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (152, 261, 397) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 887) [M::mem_pestat] mean and std.dev: (282.38, 153.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1132) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 685818 sequences (100000003 bp) in 2.429 CPU sec, 2.517 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (40, 279609, 11, 35) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (145, 207, 442) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1036) [M::mem_pestat] mean and std.dev: (241.12, 167.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1333) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (198, 302, 426) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 882) [M::mem_pestat] mean and std.dev: (322.94, 157.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1110) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (134, 1350, 2764) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 8024) [M::mem_pestat] mean and std.dev: (1182.18, 1094.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 10654) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (253, 390, 651) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1447) [M::mem_pestat] mean and std.dev: (417.48, 269.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1845) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 685724 sequences (100000016 bp) in 1.600 CPU sec, 1.606 real sec... [M::mem_process_seqs] Processed 685696 reads in 145.569 CPU sec, 4.608 real sec [M::mem_process_seqs] Processed 685310 reads in 96.086 CPU sec, 3.050 real sec sorting block 61, #reads = 1070985 mem = 536880902 peak = 1118867456 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (44, 279624, 16, 45) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (129, 253, 494) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1224) [M::mem_pestat] mean and std.dev: (279.37, 200.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1589) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (197, 301, 423) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 875) [M::mem_pestat] mean and std.dev: (321.15, 156.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1101) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (688, 688, 3552) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 9280) [M::mem_pestat] mean and std.dev: (1661.06, 2074.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 12144) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (259, 541, 1007) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2503) [M::mem_pestat] mean and std.dev: (462.16, 277.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3251) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 685642 sequences (100000203 bp) in 2.293 CPU sec, 2.388 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (39, 280231, 7, 31) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (269, 392, 878) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2096) [M::mem_pestat] mean and std.dev: (565.76, 508.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2705) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (196, 302, 426) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 886) [M::mem_pestat] mean and std.dev: (322.62, 157.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1116) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (173, 283, 444) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 986) [M::mem_pestat] mean and std.dev: (276.38, 156.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1257) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 685818 reads in 141.145 CPU sec, 4.490 real sec [M::process] read 685590 sequences (100000025 bp) in 1.866 CPU sec, 1.892 real sec... [M::mem_process_seqs] Processed 685724 reads in 95.674 CPU sec, 3.022 real sec sorting block 62, #reads = 1071466 mem = 536877780 peak = 1118867456 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (23, 280074, 10, 25) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (160, 253, 660) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1660) [M::mem_pestat] mean and std.dev: (332.50, 204.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2160) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (195, 299, 422) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 876) [M::mem_pestat] mean and std.dev: (320.35, 156.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1103) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (251, 492, 3701) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 10601) [M::mem_pestat] mean and std.dev: (1305.50, 1576.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 14051) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (166, 229, 544) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1300) [M::mem_pestat] mean and std.dev: (319.61, 224.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1678) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 685438 sequences (100000201 bp) in 2.577 CPU sec, 2.739 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (36, 279194, 8, 33) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (190, 355, 1141) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3043) [M::mem_pestat] mean and std.dev: (703.60, 729.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3994) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (196, 299, 421) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 871) [M::mem_pestat] mean and std.dev: (319.91, 155.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1096) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (280, 476, 1873) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5059) [M::mem_pestat] mean and std.dev: (753.00, 864.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6652) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 685642 reads in 142.406 CPU sec, 4.533 real sec sorting block 63, #reads = 1070828 mem = 536881240 peak = 1118867456 [M::mem_process_seqs] Processed 685590 reads in 97.534 CPU sec, 3.083 real sec [M::process] read 685700 sequences (100000241 bp) in 1.934 CPU sec, 1.992 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (46, 279147, 13, 39) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (131, 232, 344) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 770) [M::mem_pestat] mean and std.dev: (212.98, 98.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 983) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (196, 300, 421) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 871) [M::mem_pestat] mean and std.dev: (320.02, 155.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1096) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (830, 930, 1608) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3164) [M::mem_pestat] mean and std.dev: (1079.69, 705.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3942) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (192, 255, 360) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 696) [M::mem_pestat] mean and std.dev: (260.94, 103.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 864) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 64, #reads = 1069437 mem = 536876579 peak = 1118867456 [M::process] read 685796 sequences (100000045 bp) in 2.447 CPU sec, 2.612 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (35, 279107, 16, 41) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (158, 225, 484) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1136) [M::mem_pestat] mean and std.dev: (245.28, 130.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1462) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (196, 300, 421) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 871) [M::mem_pestat] mean and std.dev: (320.01, 155.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1096) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (167, 876, 3226) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 9344) [M::mem_pestat] mean and std.dev: (1575.56, 1683.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 12403) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (229, 272, 515) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1087) [M::mem_pestat] mean and std.dev: (291.75, 128.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1373) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 685438 reads in 141.858 CPU sec, 4.525 real sec [M::mem_process_seqs] Processed 685700 reads in 96.486 CPU sec, 3.049 real sec [M::process] read 685642 sequences (100000186 bp) in 2.055 CPU sec, 2.117 real sec... sorting block 65, #reads = 1068830 mem = 536881127 peak = 1118867456 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (19, 279920, 20, 25) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (149, 220, 465) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1097) [M::mem_pestat] mean and std.dev: (246.31, 155.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1413) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (195, 299, 420) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 870) [M::mem_pestat] mean and std.dev: (318.99, 155.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1095) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (59, 140, 447) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1223) [M::mem_pestat] mean and std.dev: (148.06, 141.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1611) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (214, 471, 1776) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4900) [M::mem_pestat] mean and std.dev: (901.23, 1236.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6462) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 685538 sequences (100000219 bp) in 2.112 CPU sec, 2.189 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (36, 280005, 8, 43) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (136, 227, 305) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 643) [M::mem_pestat] mean and std.dev: (228.94, 119.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 812) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (196, 300, 422) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 874) [M::mem_pestat] mean and std.dev: (320.31, 155.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1100) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (179, 261, 462) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1028) [M::mem_pestat] mean and std.dev: (314.20, 203.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1311) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 685212 sequences (100000056 bp) in 1.450 CPU sec, 1.446 real sec... [M::mem_process_seqs] Processed 685796 reads in 140.416 CPU sec, 4.462 real sec [M::mem_process_seqs] Processed 685642 reads in 95.126 CPU sec, 3.018 real sec sorting block 66, #reads = 1067665 mem = 536882397 peak = 1118867456 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (23, 280001, 15, 31) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (156, 256, 299) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 585) [M::mem_pestat] mean and std.dev: (221.26, 71.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 728) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (196, 302, 427) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 889) [M::mem_pestat] mean and std.dev: (322.76, 157.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1120) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (999, 5735, 5735) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 15207) [M::mem_pestat] mean and std.dev: (3882.80, 2335.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 19943) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (185, 242, 325) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 605) [M::mem_pestat] mean and std.dev: (241.65, 97.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 745) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 685296 sequences (100000107 bp) in 2.141 CPU sec, 2.240 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (35, 279925, 15, 30) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (204, 377, 761) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1875) [M::mem_pestat] mean and std.dev: (382.38, 340.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2432) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (198, 304, 428) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 888) [M::mem_pestat] mean and std.dev: (324.35, 158.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1118) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (388, 1208, 1991) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5197) [M::mem_pestat] mean and std.dev: (1354.07, 1138.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6800) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (239, 307, 363) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 611) [M::mem_pestat] mean and std.dev: (276.65, 85.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 735) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 685426 sequences (100000165 bp) in 1.590 CPU sec, 1.593 real sec... [M::mem_process_seqs] Processed 685538 reads in 138.806 CPU sec, 4.408 real sec sorting block 67, #reads = 1070004 mem = 536880312 peak = 1118867456 [M::mem_process_seqs] Processed 685212 reads in 94.295 CPU sec, 2.987 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (38, 279653, 10, 39) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (493, 665, 2593) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6793) [M::mem_pestat] mean and std.dev: (1301.15, 1346.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8893) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (199, 306, 433) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 901) [M::mem_pestat] mean and std.dev: (327.06, 160.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1135) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (501, 763, 844) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1530) [M::mem_pestat] mean and std.dev: (635.12, 165.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1873) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (172, 310, 597) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1447) [M::mem_pestat] mean and std.dev: (413.92, 303.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1872) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 68, #reads = 1070662 mem = 536877798 peak = 1118867456 [M::process] read 684852 sequences (100000261 bp) in 2.470 CPU sec, 2.643 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (34, 279586, 12, 38) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (183, 314, 487) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1095) [M::mem_pestat] mean and std.dev: (363.15, 241.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1399) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (198, 305, 432) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 900) [M::mem_pestat] mean and std.dev: (326.68, 161.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1134) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (570, 1699, 2625) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6735) [M::mem_pestat] mean and std.dev: (1621.82, 1202.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8790) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (189, 403, 602) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1428) [M::mem_pestat] mean and std.dev: (446.08, 331.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1841) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 684872 sequences (100000180 bp) in 1.550 CPU sec, 1.552 real sec... [M::mem_process_seqs] Processed 685296 reads in 144.125 CPU sec, 4.572 real sec [M::mem_process_seqs] Processed 685426 reads in 100.577 CPU sec, 3.189 real sec sorting block 69, #reads = 1069531 mem = 536877734 peak = 1118867456 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (46, 279153, 11, 41) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (169, 274, 498) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1156) [M::mem_pestat] mean and std.dev: (329.73, 234.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1485) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (200, 308, 437) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 911) [M::mem_pestat] mean and std.dev: (330.17, 163.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1148) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (725, 800, 1704) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3662) [M::mem_pestat] mean and std.dev: (1024.55, 660.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4641) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (244, 350, 917) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2263) [M::mem_pestat] mean and std.dev: (543.77, 512.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2936) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 689070 sequences (100000030 bp) in 2.101 CPU sec, 2.188 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (28, 279670, 14, 25) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (182, 349, 675) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1661) [M::mem_pestat] mean and std.dev: (425.56, 384.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2154) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (200, 311, 442) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 926) [M::mem_pestat] mean and std.dev: (332.86, 165.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1168) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (82, 861, 861) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2419) [M::mem_pestat] mean and std.dev: (475.67, 421.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3198) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (288, 331, 1298) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3318) [M::mem_pestat] mean and std.dev: (810.92, 893.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4385) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 689910 sequences (100000301 bp) in 1.580 CPU sec, 1.579 real sec... [M::mem_process_seqs] Processed 684852 reads in 143.263 CPU sec, 4.551 real sec [M::mem_process_seqs] Processed 684872 reads in 96.549 CPU sec, 3.061 real sec sorting block 70, #reads = 1070230 mem = 536878877 peak = 1118867456 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (34, 281022, 10, 22) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (214, 381, 586) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1330) [M::mem_pestat] mean and std.dev: (356.06, 193.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1702) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (187, 289, 414) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 868) [M::mem_pestat] mean and std.dev: (312.27, 156.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1095) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (214, 475, 1982) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5518) [M::mem_pestat] mean and std.dev: (547.75, 599.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7286) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (212, 263, 460) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 956) [M::mem_pestat] mean and std.dev: (298.50, 179.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1204) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 688982 sequences (100000077 bp) in 2.323 CPU sec, 2.425 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (28, 281287, 9, 39) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (211, 368, 666) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1576) [M::mem_pestat] mean and std.dev: (366.74, 206.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2031) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (185, 287, 409) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 857) [M::mem_pestat] mean and std.dev: (308.83, 154.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1081) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (185, 283, 414) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 872) [M::mem_pestat] mean and std.dev: (278.17, 124.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1101) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 688444 sequences (100000006 bp) in 1.690 CPU sec, 1.691 real sec... [M::mem_process_seqs] Processed 689070 reads in 142.294 CPU sec, 4.512 real sec [M::mem_process_seqs] Processed 689910 reads in 94.133 CPU sec, 2.983 real sec sorting block 71, #reads = 1069193 mem = 536879756 peak = 1118867456 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (22, 280737, 8, 45) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (156, 247, 332) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 684) [M::mem_pestat] mean and std.dev: (246.40, 125.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 860) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (188, 290, 411) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 857) [M::mem_pestat] mean and std.dev: (311.56, 154.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1080) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (193, 254, 496) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1102) [M::mem_pestat] mean and std.dev: (298.74, 205.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1405) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 688240 sequences (100000243 bp) in 2.436 CPU sec, 2.589 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 280983, 9, 46) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (170, 288, 911) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2393) [M::mem_pestat] mean and std.dev: (487.33, 447.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3134) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (189, 293, 419) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 879) [M::mem_pestat] mean and std.dev: (315.70, 158.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1109) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (186, 255, 456) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 996) [M::mem_pestat] mean and std.dev: (301.78, 174.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1266) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 688982 reads in 137.559 CPU sec, 4.379 real sec sorting block 72, #reads = 1075361 mem = 536878826 peak = 1118867456 [M::mem_process_seqs] Processed 688444 reads in 93.884 CPU sec, 2.966 real sec [M::process] read 687716 sequences (100000056 bp) in 1.779 CPU sec, 1.815 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (47, 280160, 11, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (162, 375, 502) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1182) [M::mem_pestat] mean and std.dev: (320.73, 173.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1522) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (190, 295, 421) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 883) [M::mem_pestat] mean and std.dev: (316.89, 157.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1114) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (226, 987, 1636) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4456) [M::mem_pestat] mean and std.dev: (835.70, 637.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5866) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (201, 335, 544) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1230) [M::mem_pestat] mean and std.dev: (386.28, 240.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1573) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 73, #reads = 1075377 mem = 536877330 peak = 1118867456 [M::process] read 687244 sequences (100000208 bp) in 2.491 CPU sec, 2.670 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (43, 280235, 17, 35) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (204, 313, 405) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 807) [M::mem_pestat] mean and std.dev: (298.92, 154.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1008) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (192, 297, 420) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 876) [M::mem_pestat] mean and std.dev: (317.70, 156.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1104) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (348, 481, 1439) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3621) [M::mem_pestat] mean and std.dev: (1059.65, 1047.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5248) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (189, 209, 293) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 501) [M::mem_pestat] mean and std.dev: (217.13, 60.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 605) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 688240 reads in 137.805 CPU sec, 4.386 real sec [M::process] read 687030 sequences (100000122 bp) in 1.651 CPU sec, 1.676 real sec... [M::mem_process_seqs] Processed 687716 reads in 93.094 CPU sec, 2.939 real sec sorting block 74, #reads = 1073915 mem = 536882427 peak = 1118867456 [M::process] read 686624 sequences (100000205 bp) in 2.324 CPU sec, 2.417 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (31, 279722, 25, 40) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (153, 260, 462) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1080) [M::mem_pestat] mean and std.dev: (259.90, 146.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1389) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (193, 298, 420) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 874) [M::mem_pestat] mean and std.dev: (318.26, 156.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1101) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (198, 615, 7156) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 21072) [M::mem_pestat] mean and std.dev: (2405.40, 3136.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 28030) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (261, 495, 710) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1608) [M::mem_pestat] mean and std.dev: (443.46, 241.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2057) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 687030 reads in 77.929 CPU sec, 2.453 real sec [M::process] read 686332 sequences (100000130 bp) in 1.561 CPU sec, 1.576 real sec... sorting block 75, #reads = 1073669 mem = 536882428 peak = 1118867456 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (48, 279987, 23, 38) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (322, 685, 1568) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4060) [M::mem_pestat] mean and std.dev: (1059.65, 917.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5306) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (192, 298, 421) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 879) [M::mem_pestat] mean and std.dev: (318.37, 156.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1108) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (266, 450, 812) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1904) [M::mem_pestat] mean and std.dev: (481.65, 375.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2450) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (214, 464, 1158) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3046) [M::mem_pestat] mean and std.dev: (634.33, 638.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3990) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (29, 279875, 18, 39) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (172, 341, 835) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2161) [M::mem_pestat] mean and std.dev: (301.17, 201.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2824) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (195, 302, 426) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 888) [M::mem_pestat] mean and std.dev: (322.07, 158.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1119) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (557, 560, 1149) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2333) [M::mem_pestat] mean and std.dev: (666.50, 359.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2925) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (169, 378, 448) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1006) [M::mem_pestat] mean and std.dev: (384.26, 250.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1386) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 687244 reads in 214.419 CPU sec, 6.807 real sec [M::process] read 686564 sequences (100000145 bp) in 1.984 CPU sec, 2.009 real sec... [M::mem_process_seqs] Processed 686624 reads in 111.182 CPU sec, 3.530 real sec sorting block 76, #reads = 1073341 mem = 536878677 peak = 1118867456 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (39, 279920, 3, 45) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (258, 402, 424) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 756) [M::mem_pestat] mean and std.dev: (315.78, 125.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 922) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (196, 306, 431) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 901) [M::mem_pestat] mean and std.dev: (325.05, 159.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1136) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (166, 227, 337) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 679) [M::mem_pestat] mean and std.dev: (254.33, 135.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 850) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 686498 sequences (100000007 bp) in 2.438 CPU sec, 2.658 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (34, 280021, 10, 30) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (189, 259, 888) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2286) [M::mem_pestat] mean and std.dev: (462.50, 482.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2985) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (195, 304, 431) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 903) [M::mem_pestat] mean and std.dev: (324.40, 159.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1139) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (650, 930, 990) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1670) [M::mem_pestat] mean and std.dev: (651.38, 341.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2017) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (170, 242, 326) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 638) [M::mem_pestat] mean and std.dev: (258.17, 110.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 794) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 686332 reads in 136.758 CPU sec, 4.363 real sec [M::mem_process_seqs] Processed 686564 reads in 93.353 CPU sec, 2.954 real sec [M::process] read 686296 sequences (100000285 bp) in 1.975 CPU sec, 2.083 real sec... sorting block 77, #reads = 1073524 mem = 536877692 peak = 1118867456 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (46, 280380, 15, 28) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (174, 283, 482) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1098) [M::mem_pestat] mean and std.dev: (336.68, 251.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1406) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (196, 306, 434) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 910) [M::mem_pestat] mean and std.dev: (326.69, 161.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1148) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (427, 1087, 3517) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 9697) [M::mem_pestat] mean and std.dev: (1366.87, 1342.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 12787) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (205, 329, 658) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1564) [M::mem_pestat] mean and std.dev: (436.32, 378.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2017) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 686046 sequences (100000014 bp) in 2.147 CPU sec, 2.239 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (38, 279569, 13, 45) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (174, 349, 585) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1407) [M::mem_pestat] mean and std.dev: (372.53, 300.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1818) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (197, 306, 433) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 905) [M::mem_pestat] mean and std.dev: (326.26, 160.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1141) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (166, 376, 822) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2134) [M::mem_pestat] mean and std.dev: (408.50, 248.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2790) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (240, 294, 374) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 642) [M::mem_pestat] mean and std.dev: (274.41, 104.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 776) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 686498 reads in 136.945 CPU sec, 4.354 real sec [M::process] read 686042 sequences (100000215 bp) in 1.427 CPU sec, 1.434 real sec... [M::mem_process_seqs] Processed 686296 reads in 93.282 CPU sec, 2.958 real sec sorting block 78, #reads = 1072509 mem = 536879785 peak = 1118867456 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (30, 279800, 16, 43) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (213, 689, 764) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1866) [M::mem_pestat] mean and std.dev: (535.67, 349.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2417) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (198, 308, 436) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 912) [M::mem_pestat] mean and std.dev: (328.44, 162.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1150) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (332, 446, 2682) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7382) [M::mem_pestat] mean and std.dev: (1037.06, 1059.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9732) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (251, 350, 482) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 944) [M::mem_pestat] mean and std.dev: (375.12, 192.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1175) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 685692 sequences (100000188 bp) in 2.387 CPU sec, 2.551 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (28, 279262, 13, 50) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (227, 296, 362) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 632) [M::mem_pestat] mean and std.dev: (284.60, 120.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 767) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (198, 307, 433) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 903) [M::mem_pestat] mean and std.dev: (326.51, 160.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1138) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (848, 871, 6165) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 16799) [M::mem_pestat] mean and std.dev: (2046.31, 2312.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 22116) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (207, 392, 520) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1146) [M::mem_pestat] mean and std.dev: (376.52, 179.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1459) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 686046 reads in 137.815 CPU sec, 4.386 real sec sorting block 79, #reads = 1073413 mem = 536878259 peak = 1118867456 [M::process] read 686018 sequences (100000247 bp) in 1.630 CPU sec, 1.648 real sec... [M::mem_process_seqs] Processed 686042 reads in 92.848 CPU sec, 2.931 real sec sorting block 80, #reads = 1072851 mem = 536879547 peak = 1127477248 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 280244, 8, 39) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (213, 756, 2282) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6420) [M::mem_pestat] mean and std.dev: (897.16, 840.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8489) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (199, 307, 432) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 898) [M::mem_pestat] mean and std.dev: (326.79, 159.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1131) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (185, 297, 418) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 884) [M::mem_pestat] mean and std.dev: (259.03, 117.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1117) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 685552 sequences (100000224 bp) in 2.190 CPU sec, 2.317 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (43, 279617, 11, 55) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (170, 230, 391) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 833) [M::mem_pestat] mean and std.dev: (228.27, 93.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1054) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (197, 307, 434) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 908) [M::mem_pestat] mean and std.dev: (326.67, 160.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1145) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (787, 809, 1254) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2188) [M::mem_pestat] mean and std.dev: (891.55, 450.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2693) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (189, 308, 337) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 633) [M::mem_pestat] mean and std.dev: (271.47, 112.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 781) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 685904 sequences (100000036 bp) in 1.470 CPU sec, 1.477 real sec... [M::mem_process_seqs] Processed 685692 reads in 142.841 CPU sec, 4.694 real sec [M::mem_process_seqs] Processed 686018 reads in 94.798 CPU sec, 3.004 real sec sorting block 81, #reads = 1072751 mem = 536879475 peak = 1127477248 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (29, 279356, 12, 23) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (157, 262, 375) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 811) [M::mem_pestat] mean and std.dev: (283.59, 178.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1029) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (198, 307, 433) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 903) [M::mem_pestat] mean and std.dev: (327.08, 159.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1138) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (658, 1147, 1147) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2125) [M::mem_pestat] mean and std.dev: (883.18, 492.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2854) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (220, 503, 854) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2122) [M::mem_pestat] mean and std.dev: (577.22, 524.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2756) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 684444 sequences (100000228 bp) in 2.364 CPU sec, 2.562 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (31, 279090, 6, 29) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (232, 306, 360) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 616) [M::mem_pestat] mean and std.dev: (284.11, 81.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 744) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (198, 306, 431) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 897) [M::mem_pestat] mean and std.dev: (325.40, 158.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1130) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (240, 318, 455) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 885) [M::mem_pestat] mean and std.dev: (337.83, 128.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1100) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 685552 reads in 139.513 CPU sec, 4.439 real sec [M::process] read 684428 sequences (100000273 bp) in 1.631 CPU sec, 1.644 real sec... [M::mem_process_seqs] Processed 685904 reads in 95.102 CPU sec, 3.007 real sec sorting block 82, #reads = 1071441 mem = 536877598 peak = 1127477248 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (36, 279002, 9, 37) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (176, 272, 402) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 854) [M::mem_pestat] mean and std.dev: (301.39, 171.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1080) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (202, 310, 433) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 895) [M::mem_pestat] mean and std.dev: (328.68, 158.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1126) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (317, 459, 1208) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2990) [M::mem_pestat] mean and std.dev: (621.94, 552.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3881) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 686072 sequences (100000294 bp) in 2.136 CPU sec, 2.211 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (30, 279864, 20, 33) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (121, 227, 551) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1411) [M::mem_pestat] mean and std.dev: (266.56, 175.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1841) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (202, 310, 435) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 901) [M::mem_pestat] mean and std.dev: (329.34, 159.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1134) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (76, 2210, 5735) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 17053) [M::mem_pestat] mean and std.dev: (2674.55, 2623.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 22712) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (152, 287, 1082) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2942) [M::mem_pestat] mean and std.dev: (568.61, 613.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3872) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 686260 sequences (100000196 bp) in 1.500 CPU sec, 1.502 real sec... [M::mem_process_seqs] Processed 684444 reads in 138.790 CPU sec, 4.415 real sec sorting block 83, #reads = 1071639 mem = 536878833 peak = 1127477248 [M::mem_process_seqs] Processed 684428 reads in 93.909 CPU sec, 2.984 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (42, 279567, 9, 38) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (167, 237, 648) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1610) [M::mem_pestat] mean and std.dev: (376.21, 337.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2091) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (196, 302, 427) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 889) [M::mem_pestat] mean and std.dev: (322.56, 157.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1120) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (243, 393, 937) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2325) [M::mem_pestat] mean and std.dev: (451.94, 358.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3019) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 84, #reads = 1070397 mem = 536881158 peak = 1127477248 [M::process] read 686310 sequences (100000177 bp) in 2.317 CPU sec, 2.494 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (40, 279674, 8, 37) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (177, 262, 586) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1404) [M::mem_pestat] mean and std.dev: (364.11, 232.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1813) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (195, 298, 420) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 870) [M::mem_pestat] mean and std.dev: (318.61, 155.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1095) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (218, 338, 525) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1139) [M::mem_pestat] mean and std.dev: (357.97, 215.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1446) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 686072 reads in 139.681 CPU sec, 4.445 real sec [M::process] read 686044 sequences (100000117 bp) in 1.653 CPU sec, 1.668 real sec... [M::mem_process_seqs] Processed 686260 reads in 95.508 CPU sec, 3.017 real sec sorting block 85, #reads = 1069716 mem = 536880276 peak = 1127477248 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (52, 279322, 6, 45) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (173, 244, 370) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 764) [M::mem_pestat] mean and std.dev: (271.84, 128.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 961) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (193, 296, 418) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 868) [M::mem_pestat] mean and std.dev: (316.89, 154.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1093) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (228, 280, 353) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 603) [M::mem_pestat] mean and std.dev: (279.93, 74.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 728) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 685980 sequences (100000076 bp) in 2.169 CPU sec, 2.243 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (31, 279768, 18, 27) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (206, 424, 941) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2411) [M::mem_pestat] mean and std.dev: (476.36, 329.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3146) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (196, 300, 422) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 874) [M::mem_pestat] mean and std.dev: (319.74, 155.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1100) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (372, 857, 906) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1974) [M::mem_pestat] mean and std.dev: (670.61, 405.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2508) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (233, 308, 431) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 827) [M::mem_pestat] mean and std.dev: (284.48, 89.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1025) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 686070 sequences (100000201 bp) in 1.500 CPU sec, 1.500 real sec... [M::mem_process_seqs] Processed 686310 reads in 138.033 CPU sec, 4.384 real sec [M::mem_process_seqs] Processed 686044 reads in 93.239 CPU sec, 2.962 real sec sorting block 86, #reads = 1071115 mem = 536882218 peak = 1127477248 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (38, 279860, 14, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (182, 287, 582) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1382) [M::mem_pestat] mean and std.dev: (368.29, 239.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1782) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (196, 300, 422) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 874) [M::mem_pestat] mean and std.dev: (320.16, 155.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1100) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (289, 1237, 1910) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5152) [M::mem_pestat] mean and std.dev: (895.18, 564.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6773) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (156, 222, 319) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 645) [M::mem_pestat] mean and std.dev: (202.09, 67.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 808) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 685908 sequences (100000079 bp) in 2.004 CPU sec, 2.088 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (29, 279616, 7, 40) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (167, 256, 365) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 761) [M::mem_pestat] mean and std.dev: (247.67, 118.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 959) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (195, 299, 423) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 879) [M::mem_pestat] mean and std.dev: (319.87, 155.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1107) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (179, 263, 519) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1199) [M::mem_pestat] mean and std.dev: (301.66, 222.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1539) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 685904 sequences (100000102 bp) in 1.520 CPU sec, 1.517 real sec... [M::mem_process_seqs] Processed 685980 reads in 139.389 CPU sec, 4.433 real sec sorting block 87, #reads = 1071223 mem = 536881161 peak = 1127477248 [M::mem_process_seqs] Processed 686070 reads in 94.365 CPU sec, 2.996 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (25, 279858, 11, 34) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (114, 286, 669) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1779) [M::mem_pestat] mean and std.dev: (376.91, 398.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2334) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (195, 299, 420) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 870) [M::mem_pestat] mean and std.dev: (318.91, 154.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1095) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (252, 559, 3606) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 10314) [M::mem_pestat] mean and std.dev: (1446.82, 1698.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 13668) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (205, 285, 831) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2083) [M::mem_pestat] mean and std.dev: (427.77, 347.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2709) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 685908 sequences (100000219 bp) in 2.310 CPU sec, 2.389 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (46, 279757, 14, 32) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (190, 277, 656) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1588) [M::mem_pestat] mean and std.dev: (409.71, 386.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2054) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (195, 297, 418) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 864) [M::mem_pestat] mean and std.dev: (317.30, 153.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1087) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (474, 796, 1079) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2289) [M::mem_pestat] mean and std.dev: (743.15, 346.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2894) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (243, 348, 454) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 876) [M::mem_pestat] mean and std.dev: (299.85, 123.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1087) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 685616 sequences (100000119 bp) in 1.540 CPU sec, 1.546 real sec... [M::mem_process_seqs] Processed 685908 reads in 138.495 CPU sec, 4.392 real sec sorting block 88, #reads = 1071120 mem = 536882083 peak = 1127477248 [M::mem_process_seqs] Processed 685904 reads in 93.849 CPU sec, 2.976 real sec sorting block 89, #reads = 1070767 mem = 536878459 peak = 1127477248 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (24, 279281, 8, 49) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (160, 225, 502) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1186) [M::mem_pestat] mean and std.dev: (267.36, 171.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1528) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (195, 299, 419) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 867) [M::mem_pestat] mean and std.dev: (318.29, 154.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1091) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (300, 367, 554) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1062) [M::mem_pestat] mean and std.dev: (376.40, 160.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1316) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 685558 sequences (100000138 bp) in 2.178 CPU sec, 2.295 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (35, 279465, 14, 41) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (163, 231, 546) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1312) [M::mem_pestat] mean and std.dev: (282.16, 200.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1695) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (197, 301, 423) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 875) [M::mem_pestat] mean and std.dev: (320.81, 155.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1101) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (56, 56, 689) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1955) [M::mem_pestat] mean and std.dev: (362.29, 503.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2588) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (244, 379, 745) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1747) [M::mem_pestat] mean and std.dev: (394.95, 213.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2248) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 685632 sequences (100000190 bp) in 1.520 CPU sec, 1.516 real sec... [M::mem_process_seqs] Processed 685908 reads in 138.632 CPU sec, 4.407 real sec [M::mem_process_seqs] Processed 685616 reads in 94.255 CPU sec, 2.987 real sec sorting block 90, #reads = 1070814 mem = 536877547 peak = 1127477248 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (33, 279697, 16, 35) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (180, 282, 402) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 846) [M::mem_pestat] mean and std.dev: (246.93, 129.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1068) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (197, 302, 426) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 884) [M::mem_pestat] mean and std.dev: (322.58, 157.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1113) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (469, 1438, 1529) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3649) [M::mem_pestat] mean and std.dev: (1144.06, 786.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4709) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (212, 292, 465) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 971) [M::mem_pestat] mean and std.dev: (315.06, 154.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1224) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 685326 sequences (100000236 bp) in 2.340 CPU sec, 2.429 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (35, 279537, 13, 35) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (174, 348, 1867) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5253) [M::mem_pestat] mean and std.dev: (821.97, 929.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6946) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (196, 301, 424) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 880) [M::mem_pestat] mean and std.dev: (321.17, 156.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1108) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (189, 233, 2130) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6012) [M::mem_pestat] mean and std.dev: (1014.31, 1487.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7953) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (350, 544, 1009) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2327) [M::mem_pestat] mean and std.dev: (641.79, 439.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2986) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 685282 sequences (100000085 bp) in 1.580 CPU sec, 1.576 real sec... [M::mem_process_seqs] Processed 685558 reads in 136.836 CPU sec, 4.339 real sec [M::mem_process_seqs] Processed 685632 reads in 93.101 CPU sec, 2.950 real sec sorting block 91, #reads = 1069974 mem = 536881539 peak = 1127477248 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (26, 280175, 6, 35) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (149, 241, 592) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1478) [M::mem_pestat] mean and std.dev: (374.92, 362.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1921) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (197, 303, 428) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 890) [M::mem_pestat] mean and std.dev: (323.66, 158.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1121) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (223, 295, 743) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1783) [M::mem_pestat] mean and std.dev: (399.89, 245.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2303) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 683598 sequences (100000033 bp) in 2.324 CPU sec, 2.504 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (40, 279809, 10, 40) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (191, 325, 579) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1355) [M::mem_pestat] mean and std.dev: (404.88, 278.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1743) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (198, 305, 430) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 894) [M::mem_pestat] mean and std.dev: (326.12, 159.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1126) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (263, 828, 828) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1958) [M::mem_pestat] mean and std.dev: (499.33, 317.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2523) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (232, 297, 479) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 973) [M::mem_pestat] mean and std.dev: (326.97, 164.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1220) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 685326 reads in 136.841 CPU sec, 4.352 real sec [M::process] read 685424 sequences (100000086 bp) in 1.644 CPU sec, 1.671 real sec... sorting block 92, #reads = 1071016 mem = 536876578 peak = 1127477248 [M::mem_process_seqs] Processed 685282 reads in 92.973 CPU sec, 2.940 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (32, 278794, 25, 24) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (146, 254, 373) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 827) [M::mem_pestat] mean and std.dev: (260.18, 171.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1054) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (205, 315, 442) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 916) [M::mem_pestat] mean and std.dev: (334.78, 162.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1153) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (533, 1068, 1578) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3668) [M::mem_pestat] mean and std.dev: (980.52, 599.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4713) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (248, 286, 782) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1850) [M::mem_pestat] mean and std.dev: (497.39, 407.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2384) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 93, #reads = 1070810 mem = 536880108 peak = 1127477248 [M::process] read 685328 sequences (100000005 bp) in 2.097 CPU sec, 2.179 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (30, 279378, 12, 45) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (194, 273, 443) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 941) [M::mem_pestat] mean and std.dev: (299.36, 183.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1190) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (198, 305, 432) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 900) [M::mem_pestat] mean and std.dev: (326.51, 160.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1134) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (629, 632, 1667) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3743) [M::mem_pestat] mean and std.dev: (590.90, 435.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4781) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (224, 324, 859) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2129) [M::mem_pestat] mean and std.dev: (517.12, 538.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2764) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 683598 reads in 137.430 CPU sec, 4.369 real sec [M::process] read 693628 sequences (100000137 bp) in 1.590 CPU sec, 1.592 real sec... [M::mem_process_seqs] Processed 685424 reads in 94.062 CPU sec, 2.979 real sec sorting block 94, #reads = 1068410 mem = 536883285 peak = 1127477248 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (43, 279829, 19, 55) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (192, 277, 492) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1092) [M::mem_pestat] mean and std.dev: (317.56, 198.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1392) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (197, 305, 436) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 914) [M::mem_pestat] mean and std.dev: (328.12, 162.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1153) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (513, 556, 788) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1338) [M::mem_pestat] mean and std.dev: (592.94, 315.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1854) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (242, 406, 610) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1346) [M::mem_pestat] mean and std.dev: (462.10, 298.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1714) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 695116 sequences (100000092 bp) in 2.089 CPU sec, 2.166 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (20, 282416, 18, 19) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (156, 209, 362) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 774) [M::mem_pestat] mean and std.dev: (226.12, 147.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 980) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (174, 267, 395) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 837) [M::mem_pestat] mean and std.dev: (295.88, 152.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1058) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (319, 1033, 2375) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6487) [M::mem_pestat] mean and std.dev: (1342.00, 1135.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8543) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (221, 360, 495) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1043) [M::mem_pestat] mean and std.dev: (404.89, 250.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1407) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 693658 sequences (100000001 bp) in 1.580 CPU sec, 1.577 real sec... [M::mem_process_seqs] Processed 685328 reads in 145.091 CPU sec, 4.613 real sec [M::mem_process_seqs] Processed 693628 reads in 101.998 CPU sec, 3.237 real sec sorting block 95, #reads = 1069954 mem = 536876925 peak = 1127477248 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (36, 283183, 11, 40) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (231, 278, 658) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1512) [M::mem_pestat] mean and std.dev: (315.03, 184.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1939) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (170, 261, 387) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 821) [M::mem_pestat] mean and std.dev: (290.18, 149.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1038) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (361, 808, 1163) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2767) [M::mem_pestat] mean and std.dev: (586.56, 429.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3569) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (211, 279, 467) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 979) [M::mem_pestat] mean and std.dev: (314.16, 131.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1235) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 692594 sequences (100000179 bp) in 2.687 CPU sec, 2.855 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (20, 282858, 13, 26) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (131, 172, 274) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 560) [M::mem_pestat] mean and std.dev: (171.41, 71.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 703) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (174, 269, 398) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 846) [M::mem_pestat] mean and std.dev: (297.11, 152.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1070) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (251, 348, 1190) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3068) [M::mem_pestat] mean and std.dev: (631.42, 541.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4007) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (208, 394, 954) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2446) [M::mem_pestat] mean and std.dev: (547.75, 519.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3192) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 695116 reads in 150.994 CPU sec, 4.783 real sec [M::process] read 692002 sequences (100000039 bp) in 1.729 CPU sec, 1.731 real sec... sorting block 96, #reads = 1068571 mem = 536878251 peak = 1127477248 [M::mem_process_seqs] Processed 693658 reads in 101.021 CPU sec, 3.195 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (37, 282875, 7, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (211, 382, 1853) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5137) [M::mem_pestat] mean and std.dev: (814.28, 832.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6779) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (177, 274, 403) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 855) [M::mem_pestat] mean and std.dev: (301.09, 153.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1081) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (132, 189, 276) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 564) [M::mem_pestat] mean and std.dev: (204.27, 83.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 708) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 97, #reads = 1072458 mem = 536880261 peak = 1127477248 [M::process] read 691278 sequences (100000247 bp) in 2.332 CPU sec, 2.492 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (44, 282519, 11, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (172, 311, 802) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2062) [M::mem_pestat] mean and std.dev: (397.34, 319.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2692) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (178, 277, 406) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 862) [M::mem_pestat] mean and std.dev: (303.21, 153.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1090) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (80, 198, 675) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1865) [M::mem_pestat] mean and std.dev: (264.20, 285.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2460) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (176, 299, 913) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2387) [M::mem_pestat] mean and std.dev: (452.36, 410.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3124) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 690306 sequences (100000225 bp) in 1.580 CPU sec, 1.581 real sec... [M::mem_process_seqs] Processed 692594 reads in 148.571 CPU sec, 4.721 real sec [M::mem_process_seqs] Processed 692002 reads in 99.393 CPU sec, 3.153 real sec sorting block 98, #reads = 1071039 mem = 536881058 peak = 1127477248 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (35, 282872, 17, 25) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (156, 224, 377) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 819) [M::mem_pestat] mean and std.dev: (281.35, 169.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1040) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (180, 280, 412) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 876) [M::mem_pestat] mean and std.dev: (306.79, 155.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1108) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (435, 832, 1891) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4803) [M::mem_pestat] mean and std.dev: (1264.76, 1050.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6259) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (169, 242, 428) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 946) [M::mem_pestat] mean and std.dev: (234.00, 105.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1205) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 689306 sequences (100000153 bp) in 2.318 CPU sec, 2.400 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (36, 282155, 14, 43) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (222, 307, 902) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2262) [M::mem_pestat] mean and std.dev: (473.79, 328.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2942) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (183, 284, 413) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 873) [M::mem_pestat] mean and std.dev: (308.81, 155.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1103) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (67, 598, 1537) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4477) [M::mem_pestat] mean and std.dev: (1011.64, 1219.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5947) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (259, 384, 609) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1309) [M::mem_pestat] mean and std.dev: (386.38, 172.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1659) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 689074 sequences (100000070 bp) in 1.570 CPU sec, 1.569 real sec... [M::mem_process_seqs] Processed 691278 reads in 144.828 CPU sec, 4.595 real sec [M::mem_process_seqs] Processed 690306 reads in 96.744 CPU sec, 3.071 real sec sorting block 99, #reads = 1072240 mem = 536879130 peak = 1127477248 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (31, 281560, 8, 36) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (230, 352, 443) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 869) [M::mem_pestat] mean and std.dev: (302.00, 121.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1082) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (185, 289, 421) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 893) [M::mem_pestat] mean and std.dev: (313.92, 157.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1129) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (234, 1172, 1428) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3816) [M::mem_pestat] mean and std.dev: (845.78, 609.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5010) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 688286 sequences (100000095 bp) in 2.072 CPU sec, 2.145 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (34, 280947, 6, 40) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (219, 328, 510) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1092) [M::mem_pestat] mean and std.dev: (327.86, 148.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1383) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (186, 291, 424) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 900) [M::mem_pestat] mean and std.dev: (316.28, 159.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1138) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (145, 241, 299) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 607) [M::mem_pestat] mean and std.dev: (217.06, 94.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 761) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 687922 sequences (100000072 bp) in 1.520 CPU sec, 1.522 real sec... [M::mem_process_seqs] Processed 689306 reads in 143.026 CPU sec, 4.551 real sec [M::mem_process_seqs] Processed 689074 reads in 95.729 CPU sec, 3.041 real sec sorting block 100, #reads = 1071028 mem = 536881551 peak = 1127477248 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (43, 281074, 7, 39) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (248, 318, 566) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1202) [M::mem_pestat] mean and std.dev: (408.90, 272.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1520) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (189, 297, 431) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 915) [M::mem_pestat] mean and std.dev: (320.44, 160.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1157) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (226, 274, 508) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1072) [M::mem_pestat] mean and std.dev: (360.23, 197.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1354) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 688582 sequences (100000018 bp) in 2.626 CPU sec, 2.798 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (31, 280909, 5, 39) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (168, 244, 373) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 783) [M::mem_pestat] mean and std.dev: (245.69, 117.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 988) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (190, 299, 434) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 922) [M::mem_pestat] mean and std.dev: (322.38, 161.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1166) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (185, 275, 418) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 884) [M::mem_pestat] mean and std.dev: (288.69, 151.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1117) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 688286 reads in 144.369 CPU sec, 4.579 real sec [M::process] read 688172 sequences (100000118 bp) in 1.633 CPU sec, 1.636 real sec... sorting block 101, #reads = 1070818 mem = 536878870 peak = 1127477248 [M::mem_process_seqs] Processed 687922 reads in 96.811 CPU sec, 3.063 real sec sorting block 102, #reads = 1071082 mem = 536887029 peak = 1131573248 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (37, 281561, 22, 27) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (156, 262, 503) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1197) [M::mem_pestat] mean and std.dev: (348.03, 249.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1544) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (188, 295, 428) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 908) [M::mem_pestat] mean and std.dev: (318.71, 160.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1148) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (442, 928, 953) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1975) [M::mem_pestat] mean and std.dev: (587.18, 348.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2486) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (197, 337, 380) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 746) [M::mem_pestat] mean and std.dev: (279.96, 106.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 929) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 688598 sequences (100000229 bp) in 2.063 CPU sec, 2.125 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (24, 281549, 13, 45) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (160, 234, 354) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 742) [M::mem_pestat] mean and std.dev: (217.00, 114.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 936) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (189, 297, 429) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 909) [M::mem_pestat] mean and std.dev: (319.84, 159.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1149) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (172, 479, 873) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2275) [M::mem_pestat] mean and std.dev: (406.27, 281.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2976) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (178, 337, 440) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 964) [M::mem_pestat] mean and std.dev: (334.95, 182.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1226) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 688018 sequences (100000300 bp) in 1.540 CPU sec, 1.539 real sec... [M::mem_process_seqs] Processed 688582 reads in 147.361 CPU sec, 4.691 real sec [M::mem_process_seqs] Processed 688172 reads in 99.837 CPU sec, 3.172 real sec sorting block 103, #reads = 1072198 mem = 536877624 peak = 1131573248 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (43, 281498, 8, 30) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (169, 287, 553) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1321) [M::mem_pestat] mean and std.dev: (382.52, 314.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1705) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (188, 295, 426) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 902) [M::mem_pestat] mean and std.dev: (317.98, 158.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1140) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (207, 298, 570) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1296) [M::mem_pestat] mean and std.dev: (349.50, 229.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1659) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 688126 sequences (100000183 bp) in 2.357 CPU sec, 2.429 real sec... [M::process] read 688574 sequences (100000192 bp) in 1.520 CPU sec, 1.524 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (22, 280872, 25, 33) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (186, 400, 897) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2319) [M::mem_pestat] mean and std.dev: (381.22, 355.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3030) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (190, 297, 427) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 901) [M::mem_pestat] mean and std.dev: (318.76, 158.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1138) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (400, 821, 1022) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2266) [M::mem_pestat] mean and std.dev: (637.55, 280.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2888) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (176, 299, 1329) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3635) [M::mem_pestat] mean and std.dev: (718.16, 1005.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4788) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 688598 reads in 151.096 CPU sec, 4.805 real sec [M::mem_process_seqs] Processed 688018 reads in 103.554 CPU sec, 3.299 real sec sorting block 104, #reads = 1067268 mem = 536881440 peak = 1131573248 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (28, 281100, 8, 22) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (162, 278, 650) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1626) [M::mem_pestat] mean and std.dev: (382.96, 318.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2114) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (189, 297, 427) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 903) [M::mem_pestat] mean and std.dev: (318.85, 158.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1141) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (194, 334, 1021) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2675) [M::mem_pestat] mean and std.dev: (342.12, 251.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3502) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 687954 sequences (100000267 bp) in 2.123 CPU sec, 2.219 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (42, 281191, 6, 46) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (178, 321, 500) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1144) [M::mem_pestat] mean and std.dev: (301.38, 142.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1466) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (188, 295, 427) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 905) [M::mem_pestat] mean and std.dev: (317.82, 158.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1144) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (248, 409, 658) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1478) [M::mem_pestat] mean and std.dev: (491.33, 329.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1888) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 688532 sequences (100000008 bp) in 1.510 CPU sec, 1.516 real sec... [M::mem_process_seqs] Processed 688126 reads in 146.047 CPU sec, 4.645 real sec sorting block 105, #reads = 1066916 mem = 536878273 peak = 1131573248 [M::mem_process_seqs] Processed 688574 reads in 97.733 CPU sec, 3.109 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (48, 280844, 18, 36) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (234, 370, 1358) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3606) [M::mem_pestat] mean and std.dev: (792.34, 896.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4730) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (190, 298, 428) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 904) [M::mem_pestat] mean and std.dev: (319.21, 157.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1142) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (100, 445, 650) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1750) [M::mem_pestat] mean and std.dev: (414.47, 309.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2300) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (200, 316, 685) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1655) [M::mem_pestat] mean and std.dev: (393.73, 252.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2140) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 106, #reads = 1068907 mem = 536879468 peak = 1131573248 [M::process] read 687746 sequences (100000152 bp) in 2.418 CPU sec, 2.509 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (26, 281136, 18, 29) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (163, 240, 379) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 811) [M::mem_pestat] mean and std.dev: (221.00, 96.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1027) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (187, 291, 422) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 892) [M::mem_pestat] mean and std.dev: (315.18, 157.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1127) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (124, 631, 1583) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4501) [M::mem_pestat] mean and std.dev: (717.12, 789.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5960) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (197, 248, 393) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 785) [M::mem_pestat] mean and std.dev: (277.74, 135.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 981) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 687378 sequences (100000251 bp) in 1.550 CPU sec, 1.545 real sec... [M::mem_process_seqs] Processed 687954 reads in 145.166 CPU sec, 4.606 real sec [M::mem_process_seqs] Processed 688532 reads in 97.998 CPU sec, 3.111 real sec sorting block 107, #reads = 1069129 mem = 536880738 peak = 1131573248 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (54, 280720, 16, 41) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (288, 389, 722) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1590) [M::mem_pestat] mean and std.dev: (473.12, 300.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2024) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (189, 295, 427) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 903) [M::mem_pestat] mean and std.dev: (318.48, 158.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1141) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (201, 1508, 2496) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7086) [M::mem_pestat] mean and std.dev: (1200.73, 944.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9381) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (166, 354, 758) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1942) [M::mem_pestat] mean and std.dev: (413.34, 284.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2534) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 686840 sequences (100000228 bp) in 2.399 CPU sec, 2.537 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (33, 279920, 8, 27) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (188, 308, 808) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2048) [M::mem_pestat] mean and std.dev: (418.37, 366.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2668) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (191, 298, 427) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 899) [M::mem_pestat] mean and std.dev: (319.47, 157.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1135) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (246, 411, 626) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1386) [M::mem_pestat] mean and std.dev: (362.05, 177.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1766) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 687182 sequences (100000252 bp) in 1.540 CPU sec, 1.542 real sec... [M::mem_process_seqs] Processed 687746 reads in 145.570 CPU sec, 4.623 real sec [M::mem_process_seqs] Processed 687378 reads in 98.972 CPU sec, 3.134 real sec sorting block 108, #reads = 1069712 mem = 536878571 peak = 1131573248 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (26, 279764, 8, 42) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (218, 278, 651) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1517) [M::mem_pestat] mean and std.dev: (312.73, 171.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1950) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (193, 300, 429) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 901) [M::mem_pestat] mean and std.dev: (321.11, 157.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1137) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (195, 303, 595) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1395) [M::mem_pestat] mean and std.dev: (380.68, 337.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1795) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 686428 sequences (100000078 bp) in 2.286 CPU sec, 2.354 real sec... [M::process] read 686870 sequences (100000057 bp) in 1.520 CPU sec, 1.523 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (34, 280402, 7, 61) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (182, 371, 763) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1925) [M::mem_pestat] mean and std.dev: (527.64, 430.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2506) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (192, 299, 430) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 906) [M::mem_pestat] mean and std.dev: (321.38, 158.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1144) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (234, 302, 368) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 636) [M::mem_pestat] mean and std.dev: (301.70, 109.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 770) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 686840 reads in 147.952 CPU sec, 4.699 real sec sorting block 109, #reads = 1067091 mem = 536884035 peak = 1131573248 [M::mem_process_seqs] Processed 687182 reads in 99.297 CPU sec, 3.157 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (39, 280021, 10, 31) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (198, 294, 618) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1458) [M::mem_pestat] mean and std.dev: (366.77, 255.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1878) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (195, 303, 435) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 915) [M::mem_pestat] mean and std.dev: (324.74, 159.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1155) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (86, 151, 623) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1697) [M::mem_pestat] mean and std.dev: (341.78, 454.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2234) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (264, 362, 675) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1497) [M::mem_pestat] mean and std.dev: (374.23, 176.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1908) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 110, #reads = 1066721 mem = 536877939 peak = 1131573248 [M::process] read 686846 sequences (100000086 bp) in 2.499 CPU sec, 2.669 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (38, 280107, 14, 33) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (158, 230, 374) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 806) [M::mem_pestat] mean and std.dev: (265.14, 157.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1022) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (192, 298, 430) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 906) [M::mem_pestat] mean and std.dev: (321.25, 159.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1144) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (282, 372, 1031) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2529) [M::mem_pestat] mean and std.dev: (526.71, 383.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3278) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (179, 434, 1136) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3050) [M::mem_pestat] mean and std.dev: (585.62, 507.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4007) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 686504 sequences (100000256 bp) in 1.560 CPU sec, 1.566 real sec... [M::mem_process_seqs] Processed 686428 reads in 150.328 CPU sec, 4.773 real sec [M::mem_process_seqs] Processed 686870 reads in 101.217 CPU sec, 3.209 real sec sorting block 111, #reads = 1065598 mem = 536883723 peak = 1131573248 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (45, 279398, 10, 26) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (160, 275, 449) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1027) [M::mem_pestat] mean and std.dev: (302.26, 201.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1316) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (193, 299, 430) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 904) [M::mem_pestat] mean and std.dev: (321.47, 158.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1141) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (545, 837, 2680) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6950) [M::mem_pestat] mean and std.dev: (1227.70, 960.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9085) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (169, 237, 379) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 799) [M::mem_pestat] mean and std.dev: (268.74, 154.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1009) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 685764 sequences (100000279 bp) in 2.236 CPU sec, 2.304 real sec... [M::process] read 686074 sequences (100000131 bp) in 1.530 CPU sec, 1.526 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 279950, 17, 51) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (182, 289, 345) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 671) [M::mem_pestat] mean and std.dev: (243.14, 101.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 834) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (193, 299, 430) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 904) [M::mem_pestat] mean and std.dev: (321.89, 158.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1141) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (229, 673, 1339) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3559) [M::mem_pestat] mean and std.dev: (760.00, 639.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4669) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (229, 395, 735) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1747) [M::mem_pestat] mean and std.dev: (481.51, 336.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2253) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 686846 reads in 148.844 CPU sec, 4.728 real sec [M::mem_process_seqs] Processed 686504 reads in 99.358 CPU sec, 3.164 real sec sorting block 112, #reads = 1066701 mem = 536884164 peak = 1131573248 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (49, 279872, 16, 39) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (200, 324, 608) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1424) [M::mem_pestat] mean and std.dev: (344.51, 195.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1832) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (196, 304, 432) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 904) [M::mem_pestat] mean and std.dev: (324.79, 158.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1140) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (188, 984, 1647) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4565) [M::mem_pestat] mean and std.dev: (1007.31, 883.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6024) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (221, 384, 539) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1175) [M::mem_pestat] mean and std.dev: (336.00, 192.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1493) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 686114 sequences (100000097 bp) in 2.338 CPU sec, 2.525 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (43, 280125, 11, 41) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (210, 377, 529) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1167) [M::mem_pestat] mean and std.dev: (385.45, 219.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1486) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (195, 304, 435) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 915) [M::mem_pestat] mean and std.dev: (325.55, 160.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1155) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (48, 48, 2017) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5955) [M::mem_pestat] mean and std.dev: (715.82, 871.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7924) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (184, 239, 462) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1018) [M::mem_pestat] mean and std.dev: (262.77, 122.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1296) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 685754 sequences (100000166 bp) in 1.540 CPU sec, 1.540 real sec... [M::mem_process_seqs] Processed 685764 reads in 147.376 CPU sec, 4.683 real sec [M::mem_process_seqs] Processed 686074 reads in 99.929 CPU sec, 3.169 real sec sorting block 113, #reads = 1065634 mem = 536879947 peak = 1131573248 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (41, 279805, 13, 27) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (322, 426, 733) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1555) [M::mem_pestat] mean and std.dev: (503.92, 268.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1966) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (195, 303, 435) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 915) [M::mem_pestat] mean and std.dev: (325.99, 161.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1155) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (69, 1384, 1731) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5055) [M::mem_pestat] mean and std.dev: (907.58, 692.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6717) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (202, 290, 440) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 916) [M::mem_pestat] mean and std.dev: (283.55, 133.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1154) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 685534 sequences (100000020 bp) in 2.616 CPU sec, 2.807 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (38, 280177, 18, 53) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (243, 347, 856) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2082) [M::mem_pestat] mean and std.dev: (559.23, 543.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2733) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (196, 306, 437) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 919) [M::mem_pestat] mean and std.dev: (327.37, 161.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1160) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (1130, 1435, 1435) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (520, 2045) [M::mem_pestat] mean and std.dev: (1325.83, 195.71) [M::mem_pestat] low and high boundaries for proper pairs: (215, 2350) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (208, 418, 504) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1096) [M::mem_pestat] mean and std.dev: (356.02, 168.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1392) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 685430 sequences (100000291 bp) in 1.540 CPU sec, 1.535 real sec... [M::mem_process_seqs] Processed 686114 reads in 147.333 CPU sec, 4.674 real sec sorting block 114, #reads = 1066855 mem = 536880827 peak = 1131573248 [M::mem_process_seqs] Processed 685754 reads in 99.729 CPU sec, 3.161 real sec sorting block 115, #reads = 1065556 mem = 536878503 peak = 1134034944 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (22, 279728, 12, 32) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (144, 353, 451) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1065) [M::mem_pestat] mean and std.dev: (258.29, 129.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1372) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (198, 308, 442) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 930) [M::mem_pestat] mean and std.dev: (330.63, 163.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1174) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (389, 932, 1607) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4043) [M::mem_pestat] mean and std.dev: (903.92, 629.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5261) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (190, 264, 586) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1378) [M::mem_pestat] mean and std.dev: (392.03, 323.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1774) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 691752 sequences (100000299 bp) in 2.113 CPU sec, 2.184 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (32, 279407, 4, 35) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (188, 277, 404) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 836) [M::mem_pestat] mean and std.dev: (253.56, 107.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1052) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (197, 307, 441) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 929) [M::mem_pestat] mean and std.dev: (330.09, 163.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1173) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (198, 299, 516) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1152) [M::mem_pestat] mean and std.dev: (358.38, 206.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1470) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 698482 sequences (100000153 bp) in 1.580 CPU sec, 1.584 real sec... [M::mem_process_seqs] Processed 685534 reads in 146.123 CPU sec, 4.645 real sec [M::mem_process_seqs] Processed 685430 reads in 99.453 CPU sec, 3.159 real sec sorting block 116, #reads = 1066393 mem = 536881608 peak = 1134034944 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (32, 282266, 10, 27) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (178, 224, 440) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 964) [M::mem_pestat] mean and std.dev: (219.81, 92.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1226) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (179, 277, 407) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 863) [M::mem_pestat] mean and std.dev: (304.47, 156.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1091) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (698, 1389, 1456) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2972) [M::mem_pestat] mean and std.dev: (1192.89, 690.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3955) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (188, 298, 499) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1121) [M::mem_pestat] mean and std.dev: (341.84, 211.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1432) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 695120 sequences (100000291 bp) in 2.092 CPU sec, 2.149 real sec... [M::process] read 694416 sequences (100000244 bp) in 1.560 CPU sec, 1.561 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (26, 284726, 12, 38) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (130, 311, 444) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1072) [M::mem_pestat] mean and std.dev: (251.55, 129.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1386) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 248, 366) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 770) [M::mem_pestat] mean and std.dev: (275.85, 140.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 972) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (906, 992, 7514) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 20730) [M::mem_pestat] mean and std.dev: (2724.33, 3115.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 27338) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (294, 423, 2011) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5445) [M::mem_pestat] mean and std.dev: (956.53, 1065.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7162) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 691752 reads in 160.368 CPU sec, 5.103 real sec [M::mem_process_seqs] Processed 698482 reads in 109.042 CPU sec, 3.474 real sec sorting block 117, #reads = 1063998 mem = 536878593 peak = 1134034944 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 283506, 10, 47) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (194, 307, 379) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 749) [M::mem_pestat] mean and std.dev: (280.40, 115.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 934) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (170, 261, 383) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 809) [M::mem_pestat] mean and std.dev: (287.20, 145.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1022) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (209, 865, 1388) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3746) [M::mem_pestat] mean and std.dev: (839.60, 662.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4925) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (178, 255, 467) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1045) [M::mem_pestat] mean and std.dev: (270.65, 152.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1334) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 693746 sequences (100000175 bp) in 2.102 CPU sec, 2.160 real sec... [M::process] read 693458 sequences (100000024 bp) in 1.570 CPU sec, 1.564 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (34, 283195, 15, 32) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (209, 229, 352) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 638) [M::mem_pestat] mean and std.dev: (238.41, 67.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 781) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 265, 387) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 815) [M::mem_pestat] mean and std.dev: (290.45, 146.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1029) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (314, 1006, 1155) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2837) [M::mem_pestat] mean and std.dev: (760.14, 589.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3678) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (188, 423, 726) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1802) [M::mem_pestat] mean and std.dev: (378.81, 242.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2340) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 695120 reads in 157.747 CPU sec, 5.017 real sec sorting block 118, #reads = 1065574 mem = 536878867 peak = 1134034944 [M::mem_process_seqs] Processed 694416 reads in 104.789 CPU sec, 3.334 real sec sorting block 119, #reads = 1066725 mem = 536879915 peak = 1140588544 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (25, 282557, 10, 35) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (199, 234, 419) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 859) [M::mem_pestat] mean and std.dev: (306.91, 172.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1079) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (174, 268, 391) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 825) [M::mem_pestat] mean and std.dev: (292.67, 147.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1042) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (737, 1072, 3068) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7730) [M::mem_pestat] mean and std.dev: (1026.75, 849.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 10061) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (226, 297, 415) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 793) [M::mem_pestat] mean and std.dev: (270.69, 100.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 982) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 693072 sequences (100000235 bp) in 2.253 CPU sec, 2.305 real sec... [M::process] read 692860 sequences (100000002 bp) in 1.620 CPU sec, 1.627 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (36, 282578, 14, 29) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (203, 339, 486) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1052) [M::mem_pestat] mean and std.dev: (313.25, 165.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1335) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (175, 270, 392) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 826) [M::mem_pestat] mean and std.dev: (294.03, 146.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1043) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (389, 893, 1301) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3125) [M::mem_pestat] mean and std.dev: (893.69, 418.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4037) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (155, 233, 533) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1289) [M::mem_pestat] mean and std.dev: (326.61, 289.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1667) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 693746 reads in 157.524 CPU sec, 5.008 real sec [M::mem_process_seqs] Processed 693458 reads in 105.645 CPU sec, 3.359 real sec sorting block 120, #reads = 1066301 mem = 536876955 peak = 1140588544 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (39, 282968, 17, 35) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (189, 297, 639) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1539) [M::mem_pestat] mean and std.dev: (421.57, 392.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1992) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (175, 270, 391) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 823) [M::mem_pestat] mean and std.dev: (293.35, 145.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1039) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (483, 739, 3854) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 10596) [M::mem_pestat] mean and std.dev: (1956.53, 2338.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 13967) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (226, 324, 517) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1099) [M::mem_pestat] mean and std.dev: (371.71, 227.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1390) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 691820 sequences (100000113 bp) in 2.509 CPU sec, 2.587 real sec... [M::process] read 691782 sequences (100000152 bp) in 1.610 CPU sec, 1.605 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (27, 282870, 11, 34) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (265, 321, 559) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1147) [M::mem_pestat] mean and std.dev: (408.60, 249.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1441) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (176, 271, 393) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 827) [M::mem_pestat] mean and std.dev: (294.48, 146.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1044) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (315, 1045, 3322) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 9336) [M::mem_pestat] mean and std.dev: (1629.09, 1346.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 12343) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (185, 342, 463) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1019) [M::mem_pestat] mean and std.dev: (326.00, 175.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1297) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 693072 reads in 159.866 CPU sec, 5.083 real sec [M::mem_process_seqs] Processed 692860 reads in 108.273 CPU sec, 3.670 real sec sorting block 121, #reads = 1065164 mem = 536881801 peak = 1140588544 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (46, 282939, 8, 38) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (208, 324, 402) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 790) [M::mem_pestat] mean and std.dev: (285.71, 109.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 984) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (179, 276, 398) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 836) [M::mem_pestat] mean and std.dev: (298.78, 148.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1055) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (203, 310, 577) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1325) [M::mem_pestat] mean and std.dev: (323.52, 179.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1699) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 690508 sequences (100000184 bp) in 2.291 CPU sec, 2.383 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (54, 282645, 15, 31) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (185, 367, 694) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1712) [M::mem_pestat] mean and std.dev: (470.12, 391.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2221) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (179, 277, 400) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 842) [M::mem_pestat] mean and std.dev: (299.54, 148.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1063) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (108, 587, 1378) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3918) [M::mem_pestat] mean and std.dev: (834.07, 757.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5188) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (206, 335, 411) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 821) [M::mem_pestat] mean and std.dev: (293.43, 117.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1026) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 690692 sequences (100000136 bp) in 1.720 CPU sec, 1.713 real sec... [M::mem_process_seqs] Processed 691820 reads in 159.304 CPU sec, 5.280 real sec sorting block 122, #reads = 1064689 mem = 536878504 peak = 1140588544 [M::mem_process_seqs] Processed 691782 reads in 104.055 CPU sec, 3.306 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (39, 282449, 10, 44) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (227, 254, 403) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 755) [M::mem_pestat] mean and std.dev: (283.09, 126.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 931) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (182, 282, 409) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 863) [M::mem_pestat] mean and std.dev: (305.29, 151.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1090) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (18, 447, 5155) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 15429) [M::mem_pestat] mean and std.dev: (2242.80, 2571.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 20566) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (197, 284, 756) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1874) [M::mem_pestat] mean and std.dev: (357.78, 356.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2433) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 123, #reads = 1065268 mem = 536878646 peak = 1140588544 [M::process] read 690436 sequences (100000074 bp) in 2.607 CPU sec, 2.798 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (37, 282430, 2, 22) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (164, 290, 545) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1307) [M::mem_pestat] mean and std.dev: (384.33, 275.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1688) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (182, 283, 409) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 863) [M::mem_pestat] mean and std.dev: (305.55, 151.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1090) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (181, 325, 545) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1273) [M::mem_pestat] mean and std.dev: (369.33, 217.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1637) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 689964 sequences (100000193 bp) in 1.720 CPU sec, 1.711 real sec... [M::mem_process_seqs] Processed 690508 reads in 163.640 CPU sec, 5.194 real sec [M::mem_process_seqs] Processed 690692 reads in 109.593 CPU sec, 3.476 real sec sorting block 124, #reads = 1067857 mem = 536882306 peak = 1140588544 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (36, 281680, 5, 31) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (206, 363, 1142) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3014) [M::mem_pestat] mean and std.dev: (557.24, 634.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3950) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (182, 284, 410) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 866) [M::mem_pestat] mean and std.dev: (306.77, 153.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1094) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (328, 401, 699) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1441) [M::mem_pestat] mean and std.dev: (448.89, 261.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1812) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 689100 sequences (100000172 bp) in 2.419 CPU sec, 2.466 real sec... [M::process] read 689236 sequences (100000170 bp) in 1.670 CPU sec, 1.671 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (29, 281621, 12, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (134, 173, 345) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 767) [M::mem_pestat] mean and std.dev: (217.39, 109.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 978) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (184, 286, 411) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 865) [M::mem_pestat] mean and std.dev: (307.75, 151.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1092) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (23, 1824, 2049) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6101) [M::mem_pestat] mean and std.dev: (1301.92, 1026.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8127) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (202, 282, 786) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1954) [M::mem_pestat] mean and std.dev: (449.12, 373.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2538) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 690436 reads in 167.523 CPU sec, 5.320 real sec [M::mem_process_seqs] Processed 689964 reads in 108.154 CPU sec, 3.443 real sec sorting block 125, #reads = 1065871 mem = 536877377 peak = 1140588544 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (31, 281550, 11, 56) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (208, 290, 1359) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3661) [M::mem_pestat] mean and std.dev: (704.23, 758.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4812) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (186, 289, 413) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 867) [M::mem_pestat] mean and std.dev: (309.94, 152.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1094) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (999, 2112, 3494) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 8484) [M::mem_pestat] mean and std.dev: (2277.64, 1402.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 10979) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (204, 270, 507) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1113) [M::mem_pestat] mean and std.dev: (334.89, 174.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1416) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 689846 sequences (100000286 bp) in 2.231 CPU sec, 2.286 real sec... [M::process] read 689660 sequences (100000050 bp) in 1.670 CPU sec, 1.672 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (38, 281001, 10, 23) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (142, 256, 441) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1039) [M::mem_pestat] mean and std.dev: (226.37, 110.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1338) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (186, 288, 415) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 873) [M::mem_pestat] mean and std.dev: (310.70, 153.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1102) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (73, 515, 723) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2023) [M::mem_pestat] mean and std.dev: (469.20, 474.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2673) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (220, 240, 528) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1144) [M::mem_pestat] mean and std.dev: (339.18, 194.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1452) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 689100 reads in 168.250 CPU sec, 5.531 real sec [M::mem_process_seqs] Processed 689236 reads in 110.577 CPU sec, 3.505 real sec sorting block 126, #reads = 1067366 mem = 536881048 peak = 1140588544 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (39, 282307, 15, 43) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (238, 330, 373) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 643) [M::mem_pestat] mean and std.dev: (287.66, 102.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 778) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (183, 284, 411) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 867) [M::mem_pestat] mean and std.dev: (307.62, 152.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1095) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (388, 507, 1528) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3808) [M::mem_pestat] mean and std.dev: (769.14, 744.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4948) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (260, 374, 505) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 995) [M::mem_pestat] mean and std.dev: (379.79, 195.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1240) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 688610 sequences (100000139 bp) in 2.222 CPU sec, 2.260 real sec... [M::process] read 688052 sequences (100000016 bp) in 1.670 CPU sec, 1.667 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (25, 282023, 6, 25) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (140, 302, 575) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1445) [M::mem_pestat] mean and std.dev: (354.00, 254.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1880) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (184, 285, 412) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 868) [M::mem_pestat] mean and std.dev: (308.60, 153.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1096) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (155, 241, 345) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 725) [M::mem_pestat] mean and std.dev: (252.61, 125.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 915) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 689846 reads in 166.374 CPU sec, 5.280 real sec sorting block 127, #reads = 1066287 mem = 536885867 peak = 1163096064 [M::mem_process_seqs] Processed 689660 reads in 109.141 CPU sec, 3.472 real sec sorting block 128, #reads = 1066277 mem = 536882799 peak = 1225007104 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (30, 281129, 5, 40) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (177, 345, 453) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1005) [M::mem_pestat] mean and std.dev: (301.04, 176.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1281) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (188, 292, 418) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 878) [M::mem_pestat] mean and std.dev: (313.75, 155.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1108) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (261, 422, 976) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2406) [M::mem_pestat] mean and std.dev: (543.11, 436.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3121) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 688932 sequences (100000248 bp) in 2.232 CPU sec, 2.282 real sec... [M::process] read 688518 sequences (100000038 bp) in 1.660 CPU sec, 1.658 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (42, 281108, 15, 50) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (209, 286, 407) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 803) [M::mem_pestat] mean and std.dev: (279.00, 111.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1001) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (190, 296, 426) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 898) [M::mem_pestat] mean and std.dev: (318.65, 158.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1134) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (224, 708, 1098) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2846) [M::mem_pestat] mean and std.dev: (678.21, 554.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3720) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (204, 326, 379) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 729) [M::mem_pestat] mean and std.dev: (271.23, 84.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 904) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 688610 reads in 159.614 CPU sec, 5.063 real sec [M::mem_process_seqs] Processed 688052 reads in 106.282 CPU sec, 3.375 real sec sorting block 129, #reads = 1068072 mem = 536877593 peak = 1225007104 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (31, 281292, 12, 28) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (227, 353, 902) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2252) [M::mem_pestat] mean and std.dev: (727.10, 764.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3786) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (186, 289, 418) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 882) [M::mem_pestat] mean and std.dev: (313.46, 157.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1114) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (372, 966, 3515) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 9801) [M::mem_pestat] mean and std.dev: (1580.75, 1427.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 12944) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (192, 359, 719) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1773) [M::mem_pestat] mean and std.dev: (460.42, 440.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2300) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 686938 sequences (100000158 bp) in 2.227 CPU sec, 2.261 real sec... [M::process] read 686948 sequences (100000241 bp) in 1.650 CPU sec, 1.658 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (37, 280755, 9, 45) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (234, 335, 665) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1527) [M::mem_pestat] mean and std.dev: (413.42, 307.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1958) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (187, 290, 423) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 895) [M::mem_pestat] mean and std.dev: (316.15, 159.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1131) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (173, 280, 573) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1373) [M::mem_pestat] mean and std.dev: (302.84, 190.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1773) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 688932 reads in 160.093 CPU sec, 5.092 real sec sorting block 130, #reads = 1067955 mem = 536878141 peak = 1225007104 [M::mem_process_seqs] Processed 688518 reads in 107.436 CPU sec, 3.402 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (45, 280679, 13, 29) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (198, 323, 682) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1650) [M::mem_pestat] mean and std.dev: (400.37, 328.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2134) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (192, 301, 435) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 921) [M::mem_pestat] mean and std.dev: (324.33, 162.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1164) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (266, 1030, 1910) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5198) [M::mem_pestat] mean and std.dev: (1090.46, 981.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6842) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (241, 451, 966) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2416) [M::mem_pestat] mean and std.dev: (688.72, 522.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3141) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 686884 sequences (100000234 bp) in 2.391 CPU sec, 2.431 real sec... [M::process] read 686734 sequences (100000247 bp) in 1.640 CPU sec, 1.642 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (24, 280286, 16, 31) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (241, 289, 426) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 796) [M::mem_pestat] mean and std.dev: (283.32, 69.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 981) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (193, 302, 437) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 925) [M::mem_pestat] mean and std.dev: (325.70, 163.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1169) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (255, 497, 956) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2358) [M::mem_pestat] mean and std.dev: (462.14, 294.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3059) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (198, 280, 454) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 966) [M::mem_pestat] mean and std.dev: (345.61, 195.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1222) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 686938 reads in 156.190 CPU sec, 4.948 real sec sorting block 131, #reads = 1067627 mem = 536878097 peak = 1225007104 [M::mem_process_seqs] Processed 686948 reads in 103.931 CPU sec, 3.300 real sec sorting block 132, #reads = 1067122 mem = 536878330 peak = 1225007104 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (26, 280517, 17, 34) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (150, 251, 513) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1239) [M::mem_pestat] mean and std.dev: (253.57, 152.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1602) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (193, 302, 438) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 928) [M::mem_pestat] mean and std.dev: (327.07, 164.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1173) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (273, 318, 823) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1923) [M::mem_pestat] mean and std.dev: (606.53, 528.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2720) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (193, 298, 475) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1039) [M::mem_pestat] mean and std.dev: (364.00, 217.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1321) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 686866 sequences (100000040 bp) in 2.215 CPU sec, 2.251 real sec... [M::process] read 686212 sequences (100000065 bp) in 1.660 CPU sec, 1.659 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (50, 280215, 13, 23) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (173, 278, 385) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 809) [M::mem_pestat] mean and std.dev: (292.40, 162.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1021) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (193, 303, 441) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 937) [M::mem_pestat] mean and std.dev: (328.34, 165.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1185) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (160, 1651, 4401) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 12883) [M::mem_pestat] mean and std.dev: (2562.23, 3360.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 17124) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (188, 231, 586) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1382) [M::mem_pestat] mean and std.dev: (352.00, 247.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1780) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 686884 reads in 155.834 CPU sec, 4.940 real sec [M::mem_process_seqs] Processed 686734 reads in 104.345 CPU sec, 3.314 real sec sorting block 133, #reads = 1067263 mem = 536879407 peak = 1225007104 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (49, 280378, 9, 53) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (245, 366, 522) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1076) [M::mem_pestat] mean and std.dev: (339.51, 180.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1353) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (193, 303, 439) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 931) [M::mem_pestat] mean and std.dev: (327.32, 165.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1177) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (240, 347, 1033) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2619) [M::mem_pestat] mean and std.dev: (455.96, 445.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3412) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 685646 sequences (100000030 bp) in 2.216 CPU sec, 2.247 real sec... [M::process] read 685528 sequences (100000231 bp) in 1.640 CPU sec, 1.635 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (25, 279956, 6, 33) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (169, 257, 422) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 928) [M::mem_pestat] mean and std.dev: (245.13, 100.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1181) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (195, 304, 438) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 924) [M::mem_pestat] mean and std.dev: (327.43, 163.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1167) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (156, 333, 1489) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4155) [M::mem_pestat] mean and std.dev: (815.64, 865.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5488) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 686866 reads in 158.238 CPU sec, 5.019 real sec [M::mem_process_seqs] Processed 686212 reads in 106.503 CPU sec, 3.383 real sec sorting block 134, #reads = 1066703 mem = 536879528 peak = 1225007104 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (26, 279895, 11, 34) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (215, 242, 319) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (7, 527) [M::mem_pestat] mean and std.dev: (233.38, 66.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 631) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (197, 308, 445) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 941) [M::mem_pestat] mean and std.dev: (331.77, 166.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1189) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (657, 670, 1379) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2823) [M::mem_pestat] mean and std.dev: (875.64, 502.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3545) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (257, 392, 653) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1445) [M::mem_pestat] mean and std.dev: (373.46, 224.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1841) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 685802 sequences (100000111 bp) in 2.405 CPU sec, 2.436 real sec... [M::process] read 689266 sequences (100000066 bp) in 1.760 CPU sec, 1.762 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (28, 279719, 9, 27) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (175, 256, 333) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 649) [M::mem_pestat] mean and std.dev: (216.18, 80.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 807) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (197, 309, 447) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 947) [M::mem_pestat] mean and std.dev: (333.34, 168.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1197) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (210, 408, 569) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1287) [M::mem_pestat] mean and std.dev: (414.73, 209.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1646) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 685646 reads in 159.289 CPU sec, 5.040 real sec sorting block 135, #reads = 1065543 mem = 536879129 peak = 1225007104 [M::mem_process_seqs] Processed 685528 reads in 107.424 CPU sec, 3.408 real sec sorting block 136, #reads = 1062475 mem = 536879681 peak = 1225007104 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (37, 279738, 12, 36) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (253, 334, 545) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1129) [M::mem_pestat] mean and std.dev: (376.53, 236.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1421) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (196, 307, 442) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 934) [M::mem_pestat] mean and std.dev: (330.53, 165.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1180) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (220, 942, 2594) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7342) [M::mem_pestat] mean and std.dev: (1218.83, 1107.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9716) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (219, 494, 746) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1800) [M::mem_pestat] mean and std.dev: (442.91, 255.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2327) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 693888 sequences (100000221 bp) in 2.235 CPU sec, 2.268 real sec... [M::process] read 692796 sequences (100000073 bp) in 1.660 CPU sec, 1.665 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (49, 280375, 9, 32) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (155, 240, 600) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1490) [M::mem_pestat] mean and std.dev: (411.15, 395.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1995) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (185, 288, 423) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 899) [M::mem_pestat] mean and std.dev: (314.87, 160.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1137) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (147, 266, 417) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 957) [M::mem_pestat] mean and std.dev: (260.55, 132.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1227) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 685802 reads in 172.086 CPU sec, 5.460 real sec [M::mem_process_seqs] Processed 689266 reads in 122.996 CPU sec, 3.918 real sec sorting block 137, #reads = 1059329 mem = 536878499 peak = 1225007104 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (30, 282619, 2, 34) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (286, 427, 878) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2062) [M::mem_pestat] mean and std.dev: (423.42, 256.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2654) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (176, 272, 398) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 842) [M::mem_pestat] mean and std.dev: (298.75, 152.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1064) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (211, 283, 401) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 781) [M::mem_pestat] mean and std.dev: (262.00, 96.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 971) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 691576 sequences (100000056 bp) in 2.413 CPU sec, 2.441 real sec... [M::process] read 691336 sequences (100000174 bp) in 1.670 CPU sec, 1.670 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (33, 282966, 19, 29) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (145, 243, 1655) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4675) [M::mem_pestat] mean and std.dev: (750.39, 979.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6185) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (174, 268, 393) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 831) [M::mem_pestat] mean and std.dev: (295.35, 151.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1050) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (305, 553, 2392) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6566) [M::mem_pestat] mean and std.dev: (1298.33, 1430.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8653) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (326, 439, 627) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1229) [M::mem_pestat] mean and std.dev: (430.12, 225.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1530) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 692796 reads in 155.298 CPU sec, 4.913 real sec [M::mem_process_seqs] Processed 693888 reads in 173.487 CPU sec, 5.510 real sec sorting block 138, #reads = 1065099 mem = 536880460 peak = 1225007104 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (39, 282358, 9, 30) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (141, 203, 356) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 786) [M::mem_pestat] mean and std.dev: (232.21, 121.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1001) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (180, 278, 404) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 852) [M::mem_pestat] mean and std.dev: (303.24, 153.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1076) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (197, 344, 967) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2507) [M::mem_pestat] mean and std.dev: (738.77, 796.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3925) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 690892 sequences (100000271 bp) in 2.054 CPU sec, 2.095 real sec... [M::process] read 689972 sequences (100000065 bp) in 1.670 CPU sec, 1.672 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (37, 282825, 14, 33) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (144, 339, 750) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1962) [M::mem_pestat] mean and std.dev: (387.97, 367.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2568) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (181, 279, 405) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 853) [M::mem_pestat] mean and std.dev: (303.93, 152.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1077) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (324, 607, 3517) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 9903) [M::mem_pestat] mean and std.dev: (1524.93, 1942.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 13096) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (160, 270, 643) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1609) [M::mem_pestat] mean and std.dev: (386.27, 336.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2092) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 691576 reads in 155.405 CPU sec, 4.923 real sec sorting block 139, #reads = 1070689 mem = 536877910 peak = 1225007104 [M::mem_process_seqs] Processed 691336 reads in 104.797 CPU sec, 3.330 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (31, 282116, 5, 45) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (228, 384, 711) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1677) [M::mem_pestat] mean and std.dev: (396.64, 220.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2160) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (181, 282, 408) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 862) [M::mem_pestat] mean and std.dev: (305.93, 154.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1089) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (195, 265, 362) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 696) [M::mem_pestat] mean and std.dev: (274.93, 107.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 863) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 689646 sequences (100000025 bp) in 2.494 CPU sec, 2.523 real sec... [M::process] read 689184 sequences (100000051 bp) in 1.760 CPU sec, 1.764 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (29, 281656, 11, 29) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (267, 420, 719) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1623) [M::mem_pestat] mean and std.dev: (403.19, 298.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2075) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (184, 286, 412) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 868) [M::mem_pestat] mean and std.dev: (309.54, 155.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1096) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (337, 571, 598) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1120) [M::mem_pestat] mean and std.dev: (478.40, 260.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1520) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (184, 231, 486) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1090) [M::mem_pestat] mean and std.dev: (260.56, 120.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1392) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 690892 reads in 158.734 CPU sec, 5.017 real sec sorting block 140, #reads = 1072255 mem = 536876950 peak = 1225007104 [M::mem_process_seqs] Processed 689972 reads in 107.271 CPU sec, 3.402 real sec sorting block 141, #reads = 1070789 mem = 536878064 peak = 1225007104 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (38, 281485, 9, 57) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (147, 180, 324) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 678) [M::mem_pestat] mean and std.dev: (212.25, 98.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 855) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (185, 289, 415) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 875) [M::mem_pestat] mean and std.dev: (311.42, 155.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1105) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (200, 352, 776) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1928) [M::mem_pestat] mean and std.dev: (470.43, 388.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2504) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 689256 sequences (100000019 bp) in 2.269 CPU sec, 2.306 real sec... [M::process] read 689096 sequences (100000243 bp) in 1.760 CPU sec, 1.761 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (33, 281352, 13, 38) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (236, 348, 1485) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3983) [M::mem_pestat] mean and std.dev: (510.68, 473.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5232) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (186, 290, 419) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 885) [M::mem_pestat] mean and std.dev: (313.61, 157.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1118) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (930, 1203, 4035) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 10245) [M::mem_pestat] mean and std.dev: (2337.69, 1582.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 13350) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (225, 312, 1247) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3291) [M::mem_pestat] mean and std.dev: (678.03, 655.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4313) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 689646 reads in 160.171 CPU sec, 5.074 real sec [M::mem_process_seqs] Processed 689184 reads in 107.281 CPU sec, 3.403 real sec sorting block 142, #reads = 1070846 mem = 536880474 peak = 1225007104 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (41, 282007, 9, 34) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (298, 504, 895) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2089) [M::mem_pestat] mean and std.dev: (537.00, 397.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2686) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (186, 290, 421) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 891) [M::mem_pestat] mean and std.dev: (314.87, 159.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1126) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (287, 398, 445) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 761) [M::mem_pestat] mean and std.dev: (331.78, 87.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 919) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 688776 sequences (100000243 bp) in 2.437 CPU sec, 2.457 real sec... [M::process] read 688558 sequences (100000206 bp) in 1.950 CPU sec, 1.954 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (32, 281803, 8, 24) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (237, 374, 430) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 816) [M::mem_pestat] mean and std.dev: (304.00, 115.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1009) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (186, 291, 420) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 888) [M::mem_pestat] mean and std.dev: (314.85, 158.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1122) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (169, 409, 629) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1549) [M::mem_pestat] mean and std.dev: (462.33, 323.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2009) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 689256 reads in 160.007 CPU sec, 5.057 real sec [M::mem_process_seqs] Processed 689096 reads in 108.244 CPU sec, 3.424 real sec sorting block 143, #reads = 1071669 mem = 536879776 peak = 1225007104 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (36, 281811, 12, 28) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (204, 282, 438) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 906) [M::mem_pestat] mean and std.dev: (318.06, 162.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1140) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (188, 295, 425) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 899) [M::mem_pestat] mean and std.dev: (318.06, 159.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1136) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (686, 1251, 1264) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2420) [M::mem_pestat] mean and std.dev: (858.83, 475.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2998) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (159, 278, 790) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2052) [M::mem_pestat] mean and std.dev: (437.63, 372.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2683) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 688552 sequences (100000261 bp) in 2.168 CPU sec, 2.194 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (34, 281164, 9, 34) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (150, 285, 501) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1203) [M::mem_pestat] mean and std.dev: (316.77, 233.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1554) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (188, 295, 424) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 896) [M::mem_pestat] mean and std.dev: (317.19, 158.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1132) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (202, 278, 785) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1951) [M::mem_pestat] mean and std.dev: (443.33, 442.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2534) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 688804 sequences (100000052 bp) in 2.360 CPU sec, 2.362 real sec... [M::mem_process_seqs] Processed 688776 reads in 160.240 CPU sec, 5.058 real sec sorting block 144, #reads = 1072932 mem = 536875794 peak = 1225007104 [M::mem_process_seqs] Processed 688558 reads in 106.193 CPU sec, 3.351 real sec sorting block 145, #reads = 1072617 mem = 536878281 peak = 1225007104 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (38, 281035, 13, 32) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (260, 382, 467) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 881) [M::mem_pestat] mean and std.dev: (321.52, 130.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1088) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (188, 294, 423) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 893) [M::mem_pestat] mean and std.dev: (316.65, 158.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1128) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (224, 469, 653) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1511) [M::mem_pestat] mean and std.dev: (523.31, 372.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2012) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (191, 279, 623) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1487) [M::mem_pestat] mean and std.dev: (324.93, 234.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1919) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 688550 sequences (100000040 bp) in 2.451 CPU sec, 2.478 real sec... [M::process] read 688076 sequences (100000210 bp) in 1.770 CPU sec, 1.769 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (41, 281007, 12, 32) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (141, 155, 285) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 573) [M::mem_pestat] mean and std.dev: (222.20, 128.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 737) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (188, 292, 419) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 881) [M::mem_pestat] mean and std.dev: (314.99, 157.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1112) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (304, 304, 2898) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 8086) [M::mem_pestat] mean and std.dev: (992.67, 1255.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 10680) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (196, 283, 494) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1090) [M::mem_pestat] mean and std.dev: (269.85, 125.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1388) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 688552 reads in 166.351 CPU sec, 5.269 real sec [M::mem_process_seqs] Processed 688804 reads in 126.472 CPU sec, 4.015 real sec sorting block 146, #reads = 1069436 mem = 536878096 peak = 1225007104 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (48, 281667, 6, 33) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (153, 334, 795) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2079) [M::mem_pestat] mean and std.dev: (498.91, 462.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2721) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (187, 292, 421) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 889) [M::mem_pestat] mean and std.dev: (314.96, 156.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1123) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (251, 317, 564) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1190) [M::mem_pestat] mean and std.dev: (352.66, 145.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1503) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 687462 sequences (100000149 bp) in 2.472 CPU sec, 2.511 real sec... [M::process] read 687014 sequences (100000027 bp) in 1.740 CPU sec, 1.737 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (30, 281236, 8, 27) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (275, 453, 737) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1661) [M::mem_pestat] mean and std.dev: (498.69, 367.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2123) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (190, 296, 425) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 895) [M::mem_pestat] mean and std.dev: (318.43, 158.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1130) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (216, 242, 615) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1413) [M::mem_pestat] mean and std.dev: (356.68, 280.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1812) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 688550 reads in 170.719 CPU sec, 5.409 real sec [M::mem_process_seqs] Processed 688076 reads in 191.166 CPU sec, 6.074 real sec sorting block 147, #reads = 1068513 mem = 536879917 peak = 1225007104 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (37, 281256, 8, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (160, 247, 897) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2371) [M::mem_pestat] mean and std.dev: (439.09, 405.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3108) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (192, 298, 425) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 891) [M::mem_pestat] mean and std.dev: (319.65, 157.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1124) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (201, 307, 431) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 891) [M::mem_pestat] mean and std.dev: (309.11, 141.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1121) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 687170 sequences (100000069 bp) in 2.504 CPU sec, 2.533 real sec... [M::process] read 687094 sequences (100000096 bp) in 1.790 CPU sec, 1.788 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (46, 280689, 3, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (245, 373, 420) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 770) [M::mem_pestat] mean and std.dev: (309.16, 127.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 945) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (192, 300, 425) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 891) [M::mem_pestat] mean and std.dev: (320.25, 157.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1124) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (196, 266, 419) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 865) [M::mem_pestat] mean and std.dev: (289.81, 130.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1088) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 687462 reads in 162.332 CPU sec, 5.134 real sec sorting block 148, #reads = 1069086 mem = 536876881 peak = 1225007104 [M::mem_process_seqs] Processed 687014 reads in 181.735 CPU sec, 5.767 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (33, 280906, 14, 43) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (226, 309, 708) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1672) [M::mem_pestat] mean and std.dev: (413.04, 295.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2154) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (192, 301, 433) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 915) [M::mem_pestat] mean and std.dev: (323.67, 161.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1156) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (65, 377, 642) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1796) [M::mem_pestat] mean and std.dev: (363.21, 282.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2373) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (181, 367, 906) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2356) [M::mem_pestat] mean and std.dev: (619.78, 593.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3081) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 686720 sequences (100000164 bp) in 2.799 CPU sec, 2.824 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (44, 280608, 13, 25) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (164, 297, 429) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 959) [M::mem_pestat] mean and std.dev: (319.29, 173.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1224) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (192, 300, 431) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 909) [M::mem_pestat] mean and std.dev: (322.98, 160.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1148) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (482, 993, 1259) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2813) [M::mem_pestat] mean and std.dev: (892.23, 488.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3590) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (209, 236, 303) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (21, 491) [M::mem_pestat] mean and std.dev: (227.00, 46.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 585) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 686522 sequences (100000101 bp) in 1.740 CPU sec, 1.749 real sec... [M::mem_process_seqs] Processed 687170 reads in 162.845 CPU sec, 5.144 real sec sorting block 149, #reads = 1069915 mem = 536877844 peak = 1225007104 [M::mem_process_seqs] Processed 687094 reads in 110.694 CPU sec, 3.500 real sec sorting block 150, #reads = 1067624 mem = 536877682 peak = 1225007104 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (33, 280251, 12, 50) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (175, 236, 331) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 643) [M::mem_pestat] mean and std.dev: (245.93, 105.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 799) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (194, 303, 435) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 917) [M::mem_pestat] mean and std.dev: (325.83, 162.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1158) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (707, 707, 5471) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 14999) [M::mem_pestat] mean and std.dev: (2519.58, 2732.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 19763) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (250, 430, 632) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1396) [M::mem_pestat] mean and std.dev: (389.55, 178.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1778) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 686278 sequences (100000091 bp) in 2.591 CPU sec, 2.621 real sec... [M::process] read 686650 sequences (100000165 bp) in 1.810 CPU sec, 1.808 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (46, 279964, 17, 33) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (237, 442, 784) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1878) [M::mem_pestat] mean and std.dev: (489.73, 291.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2425) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (194, 303, 436) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 920) [M::mem_pestat] mean and std.dev: (326.11, 162.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1162) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (122, 423, 742) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1982) [M::mem_pestat] mean and std.dev: (513.06, 416.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2602) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (178, 349, 485) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1099) [M::mem_pestat] mean and std.dev: (320.55, 200.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1406) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 686720 reads in 161.466 CPU sec, 5.104 real sec [M::mem_process_seqs] Processed 686522 reads in 106.866 CPU sec, 3.382 real sec sorting block 151, #reads = 1069545 mem = 536877881 peak = 1225007104 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (48, 279641, 16, 39) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (208, 328, 1357) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3655) [M::mem_pestat] mean and std.dev: (526.74, 539.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4804) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (194, 302, 433) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 911) [M::mem_pestat] mean and std.dev: (324.93, 161.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1150) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (1411, 2408, 3114) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6520) [M::mem_pestat] mean and std.dev: (1940.60, 1082.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8223) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (193, 259, 359) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 691) [M::mem_pestat] mean and std.dev: (269.97, 106.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 857) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 686494 sequences (100000245 bp) in 2.429 CPU sec, 2.456 real sec... [M::process] read 686812 sequences (100000167 bp) in 1.770 CPU sec, 1.771 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (44, 280349, 19, 27) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (217, 327, 548) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1210) [M::mem_pestat] mean and std.dev: (331.79, 163.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1541) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (193, 300, 432) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 910) [M::mem_pestat] mean and std.dev: (324.13, 162.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1149) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (34, 684, 1305) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3847) [M::mem_pestat] mean and std.dev: (705.61, 687.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5118) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (223, 290, 448) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 898) [M::mem_pestat] mean and std.dev: (296.17, 153.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1123) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 686278 reads in 161.231 CPU sec, 5.101 real sec sorting block 152, #reads = 1068118 mem = 536877235 peak = 1225007104 [M::mem_process_seqs] Processed 686650 reads in 110.353 CPU sec, 3.497 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (27, 280147, 15, 50) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (179, 210, 465) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1037) [M::mem_pestat] mean and std.dev: (245.46, 126.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1323) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (194, 303, 435) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 917) [M::mem_pestat] mean and std.dev: (326.23, 163.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1158) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (761, 1186, 9533) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 27077) [M::mem_pestat] mean and std.dev: (3512.07, 3806.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 35849) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (178, 309, 561) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1327) [M::mem_pestat] mean and std.dev: (412.47, 282.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1710) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 686626 sequences (100000180 bp) in 2.167 CPU sec, 2.188 real sec... [M::process] read 686262 sequences (100000178 bp) in 1.730 CPU sec, 1.731 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (39, 280203, 9, 28) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (160, 278, 434) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 982) [M::mem_pestat] mean and std.dev: (260.00, 134.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1256) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (193, 300, 431) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 907) [M::mem_pestat] mean and std.dev: (323.43, 160.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1145) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (140, 192, 352) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 776) [M::mem_pestat] mean and std.dev: (212.38, 114.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 988) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 686494 reads in 162.883 CPU sec, 5.159 real sec sorting block 153, #reads = 1067097 mem = 536879195 peak = 1225007104 [M::mem_process_seqs] Processed 686812 reads in 110.466 CPU sec, 3.511 real sec sorting block 154, #reads = 1067904 mem = 536885033 peak = 1225007104 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (26, 279815, 13, 30) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (192, 269, 996) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2604) [M::mem_pestat] mean and std.dev: (315.43, 248.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3408) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (193, 301, 434) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 916) [M::mem_pestat] mean and std.dev: (325.22, 163.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1157) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (480, 808, 1174) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2562) [M::mem_pestat] mean and std.dev: (782.92, 323.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3256) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (162, 286, 666) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1674) [M::mem_pestat] mean and std.dev: (320.68, 237.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2178) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 686604 sequences (100000169 bp) in 2.524 CPU sec, 2.548 real sec... [M::process] read 686214 sequences (100000026 bp) in 1.770 CPU sec, 1.772 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (35, 279760, 13, 53) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (210, 276, 500) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1080) [M::mem_pestat] mean and std.dev: (313.68, 213.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1370) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (195, 302, 433) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 909) [M::mem_pestat] mean and std.dev: (325.23, 161.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1147) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (241, 1154, 7897) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 23209) [M::mem_pestat] mean and std.dev: (2904.08, 3368.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 30865) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (217, 326, 457) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 937) [M::mem_pestat] mean and std.dev: (293.91, 121.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1177) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 686626 reads in 164.189 CPU sec, 5.186 real sec [M::mem_process_seqs] Processed 686262 reads in 111.932 CPU sec, 3.553 real sec sorting block 155, #reads = 1067644 mem = 536883660 peak = 1225007104 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (33, 279953, 3, 45) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (154, 300, 642) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1618) [M::mem_pestat] mean and std.dev: (337.28, 257.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2106) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (192, 300, 433) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 915) [M::mem_pestat] mean and std.dev: (324.16, 162.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1156) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (169, 271, 644) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1594) [M::mem_pestat] mean and std.dev: (370.88, 242.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2069) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 687038 sequences (100000192 bp) in 2.496 CPU sec, 2.529 real sec... [M::process] read 686450 sequences (100000184 bp) in 1.770 CPU sec, 1.776 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (30, 280108, 13, 31) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (188, 258, 355) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 689) [M::mem_pestat] mean and std.dev: (235.29, 90.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 856) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (194, 302, 436) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 920) [M::mem_pestat] mean and std.dev: (326.48, 164.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1162) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (77, 151, 1278) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3680) [M::mem_pestat] mean and std.dev: (469.38, 521.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4881) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (279, 355, 471) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 855) [M::mem_pestat] mean and std.dev: (336.10, 131.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1047) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 686604 reads in 164.244 CPU sec, 5.199 real sec [M::mem_process_seqs] Processed 686214 reads in 113.108 CPU sec, 3.588 real sec sorting block 156, #reads = 1066440 mem = 536884156 peak = 1225007104 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (30, 280447, 2, 43) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (173, 275, 441) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 977) [M::mem_pestat] mean and std.dev: (239.25, 96.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1245) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (192, 298, 433) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 915) [M::mem_pestat] mean and std.dev: (323.80, 163.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1156) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (266, 368, 700) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1568) [M::mem_pestat] mean and std.dev: (427.90, 246.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2002) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 686086 sequences (100000088 bp) in 2.631 CPU sec, 2.658 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (45, 279849, 20, 30) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (200, 266, 379) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 737) [M::mem_pestat] mean and std.dev: (265.21, 117.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 916) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (194, 301, 433) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 911) [M::mem_pestat] mean and std.dev: (324.58, 162.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1150) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (98, 495, 1373) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3923) [M::mem_pestat] mean and std.dev: (629.72, 525.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5198) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (265, 313, 523) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1039) [M::mem_pestat] mean and std.dev: (353.85, 150.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1297) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 685798 sequences (100000143 bp) in 2.320 CPU sec, 2.320 real sec... [M::mem_process_seqs] Processed 687038 reads in 169.675 CPU sec, 5.346 real sec sorting block 157, #reads = 1066866 mem = 536880014 peak = 1225007104 [M::mem_process_seqs] Processed 686450 reads in 117.952 CPU sec, 3.722 real sec sorting block 158, #reads = 1064246 mem = 536877819 peak = 1225007104 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (39, 279873, 13, 38) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (169, 292, 515) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1207) [M::mem_pestat] mean and std.dev: (320.59, 173.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1553) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (195, 304, 436) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 918) [M::mem_pestat] mean and std.dev: (327.41, 164.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1159) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (326, 464, 1507) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3869) [M::mem_pestat] mean and std.dev: (896.46, 832.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5050) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (166, 218, 318) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 622) [M::mem_pestat] mean and std.dev: (222.33, 78.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 774) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 694884 sequences (100000121 bp) in 2.787 CPU sec, 2.813 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (35, 279453, 13, 35) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (163, 288, 346) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 712) [M::mem_pestat] mean and std.dev: (277.16, 140.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 895) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (196, 305, 440) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 928) [M::mem_pestat] mean and std.dev: (329.78, 166.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1172) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (733, 1557, 1888) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4198) [M::mem_pestat] mean and std.dev: (1345.54, 754.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5353) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (255, 289, 434) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 792) [M::mem_pestat] mean and std.dev: (333.15, 156.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 971) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 698110 sequences (100000244 bp) in 2.310 CPU sec, 2.312 real sec... [M::mem_process_seqs] Processed 686086 reads in 182.420 CPU sec, 5.752 real sec [M::mem_process_seqs] Processed 685798 reads in 207.976 CPU sec, 6.579 real sec sorting block 159, #reads = 1060909 mem = 536879751 peak = 1225007104 [M::process] read 696556 sequences (100000298 bp) in 2.632 CPU sec, 2.654 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (30, 284404, 8, 35) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (177, 433, 597) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1437) [M::mem_pestat] mean and std.dev: (315.83, 166.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1857) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 251, 371) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 783) [M::mem_pestat] mean and std.dev: (278.78, 142.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 989) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (246, 276, 338) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (62, 522) [M::mem_pestat] mean and std.dev: (252.00, 95.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 635) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 694768 sequences (100000018 bp) in 1.830 CPU sec, 1.833 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (43, 282520, 15, 29) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (157, 244, 353) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 745) [M::mem_pestat] mean and std.dev: (235.80, 131.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 941) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (171, 264, 390) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 828) [M::mem_pestat] mean and std.dev: (292.17, 151.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1047) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (319, 386, 947) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2203) [M::mem_pestat] mean and std.dev: (464.62, 276.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2831) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (189, 242, 481) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1065) [M::mem_pestat] mean and std.dev: (280.50, 157.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1357) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 698110 reads in 195.489 CPU sec, 6.196 real sec sorting block 160, #reads = 1060527 mem = 536880015 peak = 1225007104 [M::mem_process_seqs] Processed 694884 reads in 222.045 CPU sec, 7.057 real sec [M::process] read 693450 sequences (100000275 bp) in 2.174 CPU sec, 2.213 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (35, 283235, 8, 48) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (218, 296, 840) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2084) [M::mem_pestat] mean and std.dev: (473.12, 342.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2706) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 264, 388) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 820) [M::mem_pestat] mean and std.dev: (290.47, 146.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1036) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (203, 310, 715) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1739) [M::mem_pestat] mean and std.dev: (407.69, 292.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2251) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 692242 sequences (100000184 bp) in 1.830 CPU sec, 1.826 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (28, 283534, 8, 31) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (196, 255, 824) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2080) [M::mem_pestat] mean and std.dev: (569.11, 597.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2958) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (168, 257, 378) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 798) [M::mem_pestat] mean and std.dev: (284.02, 144.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1008) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (154, 254, 421) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 955) [M::mem_pestat] mean and std.dev: (286.33, 212.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1222) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 694768 reads in 182.698 CPU sec, 5.790 real sec sorting block 161, #reads = 1060531 mem = 536879908 peak = 1225007104 [M::mem_process_seqs] Processed 696556 reads in 206.346 CPU sec, 6.556 real sec [M::process] read 692318 sequences (100000139 bp) in 2.492 CPU sec, 2.529 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (38, 282654, 3, 35) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (147, 219, 392) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 882) [M::mem_pestat] mean and std.dev: (288.19, 170.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1127) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (174, 269, 391) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 825) [M::mem_pestat] mean and std.dev: (293.04, 146.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1042) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (293, 361, 770) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1724) [M::mem_pestat] mean and std.dev: (559.88, 395.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2201) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 691510 sequences (100000137 bp) in 1.860 CPU sec, 1.864 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (47, 282421, 6, 22) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (160, 218, 1258) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3454) [M::mem_pestat] mean and std.dev: (586.77, 726.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4552) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (178, 274, 395) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 829) [M::mem_pestat] mean and std.dev: (296.41, 146.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1046) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (252, 305, 393) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 675) [M::mem_pestat] mean and std.dev: (313.48, 114.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 816) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 693450 reads in 180.244 CPU sec, 5.707 real sec sorting block 162, #reads = 1065339 mem = 536879645 peak = 1225007104 [M::mem_process_seqs] Processed 692242 reads in 202.455 CPU sec, 6.431 real sec sorting block 163, #reads = 1065356 mem = 536876272 peak = 1225007104 [M::process] read 691998 sequences (100000297 bp) in 2.288 CPU sec, 2.317 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (27, 282448, 13, 29) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (139, 223, 539) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1339) [M::mem_pestat] mean and std.dev: (285.00, 200.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1739) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (178, 276, 398) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 838) [M::mem_pestat] mean and std.dev: (298.31, 147.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1058) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (548, 613, 1696) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3992) [M::mem_pestat] mean and std.dev: (931.23, 669.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5140) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (169, 207, 509) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1189) [M::mem_pestat] mean and std.dev: (280.37, 179.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1529) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 690664 sequences (100000110 bp) in 1.808 CPU sec, 1.812 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (25, 282120, 5, 30) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (205, 301, 930) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2380) [M::mem_pestat] mean and std.dev: (448.78, 389.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3105) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (179, 277, 404) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 854) [M::mem_pestat] mean and std.dev: (301.77, 151.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1079) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (168, 265, 413) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 903) [M::mem_pestat] mean and std.dev: (272.85, 126.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1148) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 692318 reads in 190.050 CPU sec, 6.037 real sec [M::mem_process_seqs] Processed 691510 reads in 134.509 CPU sec, 4.298 real sec sorting block 164, #reads = 1065901 mem = 536881204 peak = 1225007104 [M::process] read 690256 sequences (100000232 bp) in 2.301 CPU sec, 2.330 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (52, 282195, 16, 30) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (181, 261, 430) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 928) [M::mem_pestat] mean and std.dev: (278.77, 134.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1177) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (178, 276, 404) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 856) [M::mem_pestat] mean and std.dev: (302.02, 152.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1082) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (295, 628, 1454) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3772) [M::mem_pestat] mean and std.dev: (694.07, 741.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4931) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (210, 301, 397) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 771) [M::mem_pestat] mean and std.dev: (274.96, 111.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 958) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 689560 sequences (100000229 bp) in 1.798 CPU sec, 1.803 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (38, 282061, 8, 42) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (153, 337, 476) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1122) [M::mem_pestat] mean and std.dev: (316.34, 192.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1445) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (182, 282, 410) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 866) [M::mem_pestat] mean and std.dev: (306.46, 153.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1094) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (185, 294, 459) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1007) [M::mem_pestat] mean and std.dev: (343.90, 172.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1281) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 691998 reads in 173.385 CPU sec, 5.484 real sec sorting block 165, #reads = 1063745 mem = 536876882 peak = 1225007104 [M::mem_process_seqs] Processed 690664 reads in 195.698 CPU sec, 6.214 real sec [M::process] read 689310 sequences (100000017 bp) in 2.314 CPU sec, 2.355 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (32, 280891, 6, 39) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (168, 236, 733) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1863) [M::mem_pestat] mean and std.dev: (434.91, 368.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2428) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (183, 283, 413) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 873) [M::mem_pestat] mean and std.dev: (308.00, 154.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1103) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (177, 293, 473) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1065) [M::mem_pestat] mean and std.dev: (325.51, 177.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1361) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 690220 sequences (100000116 bp) in 1.800 CPU sec, 1.797 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (30, 280870, 10, 25) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (150, 199, 321) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 663) [M::mem_pestat] mean and std.dev: (224.78, 122.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 834) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (185, 287, 416) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 878) [M::mem_pestat] mean and std.dev: (311.23, 155.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1109) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (875, 1640, 2382) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5396) [M::mem_pestat] mean and std.dev: (1441.00, 884.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6903) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (201, 230, 425) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 873) [M::mem_pestat] mean and std.dev: (280.08, 120.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1097) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 690256 reads in 174.540 CPU sec, 5.524 real sec sorting block 166, #reads = 1065844 mem = 536882114 peak = 1225007104 [M::mem_process_seqs] Processed 689560 reads in 118.785 CPU sec, 3.782 real sec sorting block 167, #reads = 1065250 mem = 536886839 peak = 1225007104 [M::process] read 689152 sequences (100000109 bp) in 2.355 CPU sec, 2.383 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (49, 281357, 16, 35) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (178, 260, 699) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1741) [M::mem_pestat] mean and std.dev: (342.88, 292.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2262) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (185, 287, 415) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 875) [M::mem_pestat] mean and std.dev: (310.57, 154.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1105) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (494, 505, 1849) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4559) [M::mem_pestat] mean and std.dev: (705.07, 580.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5914) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (261, 292, 480) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 918) [M::mem_pestat] mean and std.dev: (323.62, 161.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1137) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 687664 sequences (100000259 bp) in 1.878 CPU sec, 1.887 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (25, 281139, 7, 33) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (161, 201, 504) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1190) [M::mem_pestat] mean and std.dev: (256.10, 181.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1533) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (183, 281, 406) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 852) [M::mem_pestat] mean and std.dev: (304.78, 150.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1075) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (189, 280, 585) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1377) [M::mem_pestat] mean and std.dev: (380.23, 284.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1773) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 689310 reads in 175.481 CPU sec, 5.558 real sec [M::mem_process_seqs] Processed 690220 reads in 120.947 CPU sec, 3.856 real sec sorting block 168, #reads = 1066830 mem = 536879551 peak = 1225007104 [M::process] read 686858 sequences (100000229 bp) in 2.364 CPU sec, 2.398 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (51, 280798, 6, 39) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (167, 240, 408) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 890) [M::mem_pestat] mean and std.dev: (257.37, 122.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1131) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (190, 295, 423) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 889) [M::mem_pestat] mean and std.dev: (316.92, 155.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1122) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (224, 373, 939) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2369) [M::mem_pestat] mean and std.dev: (425.14, 298.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3084) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 688198 sequences (100000132 bp) in 1.838 CPU sec, 1.839 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (42, 281093, 22, 42) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (192, 357, 544) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1248) [M::mem_pestat] mean and std.dev: (363.29, 246.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1600) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (186, 288, 415) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 873) [M::mem_pestat] mean and std.dev: (310.53, 153.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1102) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (1977, 7831, 9509) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 24573) [M::mem_pestat] mean and std.dev: (5671.32, 3783.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 32105) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (287, 402, 988) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2390) [M::mem_pestat] mean and std.dev: (603.05, 553.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3091) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 687664 reads in 172.877 CPU sec, 5.465 real sec sorting block 169, #reads = 1063377 mem = 536878782 peak = 1225007104 [M::mem_process_seqs] Processed 689152 reads in 194.919 CPU sec, 6.181 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (31, 280119, 9, 35) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (201, 259, 814) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2040) [M::mem_pestat] mean and std.dev: (509.90, 518.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2653) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (194, 302, 429) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 899) [M::mem_pestat] mean and std.dev: (321.41, 156.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1134) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (262, 331, 595) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1261) [M::mem_pestat] mean and std.dev: (410.09, 270.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1594) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 688464 sequences (100000130 bp) in 2.893 CPU sec, 2.944 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (25, 280474, 10, 42) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (225, 380, 508) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1074) [M::mem_pestat] mean and std.dev: (346.87, 139.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1357) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (188, 292, 419) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 881) [M::mem_pestat] mean and std.dev: (313.78, 154.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1112) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (112, 542, 1471) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4189) [M::mem_pestat] mean and std.dev: (724.80, 729.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5548) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (193, 331, 1856) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5182) [M::mem_pestat] mean and std.dev: (910.93, 1084.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6845) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 687662 sequences (100000139 bp) in 2.410 CPU sec, 2.406 real sec... [M::mem_process_seqs] Processed 686858 reads in 180.486 CPU sec, 5.685 real sec sorting block 170, #reads = 1064376 mem = 536879766 peak = 1225007104 [M::mem_process_seqs] Processed 688198 reads in 204.945 CPU sec, 6.481 real sec sorting block 171, #reads = 1063971 mem = 536878362 peak = 1225007104 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 280992, 14, 38) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (151, 196, 583) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1447) [M::mem_pestat] mean and std.dev: (233.83, 148.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1879) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (188, 289, 417) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 875) [M::mem_pestat] mean and std.dev: (312.48, 154.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1104) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (41, 7897, 7897) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 23609) [M::mem_pestat] mean and std.dev: (4042.07, 3860.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 31465) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (154, 267, 405) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 907) [M::mem_pestat] mean and std.dev: (285.56, 170.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1158) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 687622 sequences (100000288 bp) in 2.658 CPU sec, 2.702 real sec... [M::process] read 686942 sequences (100000168 bp) in 1.780 CPU sec, 1.777 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (35, 280810, 13, 29) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (210, 293, 785) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1935) [M::mem_pestat] mean and std.dev: (360.27, 227.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2510) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (190, 293, 420) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 880) [M::mem_pestat] mean and std.dev: (315.35, 155.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1110) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (290, 612, 1320) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3380) [M::mem_pestat] mean and std.dev: (732.46, 469.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4410) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (189, 359, 985) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2577) [M::mem_pestat] mean and std.dev: (499.93, 523.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3373) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 688464 reads in 183.956 CPU sec, 5.829 real sec [M::mem_process_seqs] Processed 687662 reads in 207.884 CPU sec, 6.609 real sec sorting block 172, #reads = 1064626 mem = 536880259 peak = 1225007104 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (59, 280171, 21, 41) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (230, 310, 440) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 860) [M::mem_pestat] mean and std.dev: (332.46, 179.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1070) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (190, 294, 421) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 883) [M::mem_pestat] mean and std.dev: (316.28, 156.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1114) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (6, 1683, 1946) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5826) [M::mem_pestat] mean and std.dev: (1118.00, 1050.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7766) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (135, 208, 450) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1080) [M::mem_pestat] mean and std.dev: (229.00, 129.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1395) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 687142 sequences (100000132 bp) in 2.696 CPU sec, 2.746 real sec... [M::process] read 687308 sequences (100000111 bp) in 1.770 CPU sec, 1.769 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (56, 280384, 13, 31) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (145, 218, 374) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 832) [M::mem_pestat] mean and std.dev: (226.22, 121.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1061) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (192, 296, 424) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 888) [M::mem_pestat] mean and std.dev: (318.27, 156.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1120) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (601, 799, 2617) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6649) [M::mem_pestat] mean and std.dev: (935.83, 792.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8665) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (176, 250, 522) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1214) [M::mem_pestat] mean and std.dev: (318.83, 242.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1560) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 687622 reads in 186.748 CPU sec, 5.917 real sec sorting block 173, #reads = 1066438 mem = 536883190 peak = 1225007104 [M::mem_process_seqs] Processed 686942 reads in 128.918 CPU sec, 4.091 real sec [M::process] read 687138 sequences (100000194 bp) in 2.603 CPU sec, 2.636 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (33, 280125, 8, 33) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (183, 275, 710) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1764) [M::mem_pestat] mean and std.dev: (427.13, 376.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2291) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (191, 296, 425) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 893) [M::mem_pestat] mean and std.dev: (318.33, 157.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1127) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (212, 318, 497) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1067) [M::mem_pestat] mean and std.dev: (299.17, 125.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1352) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 687212 sequences (100000179 bp) in 1.760 CPU sec, 1.755 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (30, 280199, 9, 49) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (152, 210, 279) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 533) [M::mem_pestat] mean and std.dev: (215.57, 95.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 660) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (191, 295, 424) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 890) [M::mem_pestat] mean and std.dev: (318.03, 157.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1123) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (220, 298, 519) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1117) [M::mem_pestat] mean and std.dev: (361.13, 212.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1416) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 687142 reads in 183.051 CPU sec, 5.788 real sec sorting block 174, #reads = 1066026 mem = 536879641 peak = 1225007104 [M::mem_process_seqs] Processed 687308 reads in 207.467 CPU sec, 6.578 real sec sorting block 175, #reads = 1067997 mem = 536880432 peak = 1225007104 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (25, 280396, 16, 38) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (239, 401, 751) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1775) [M::mem_pestat] mean and std.dev: (466.36, 291.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2287) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (191, 297, 427) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 899) [M::mem_pestat] mean and std.dev: (320.46, 159.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1135) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (312, 1376, 3580) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 10116) [M::mem_pestat] mean and std.dev: (1789.62, 1742.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 13384) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (248, 427, 773) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1823) [M::mem_pestat] mean and std.dev: (474.09, 390.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2348) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 686802 sequences (100000171 bp) in 2.517 CPU sec, 2.554 real sec... [M::process] read 687030 sequences (100000278 bp) in 1.810 CPU sec, 1.813 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (27, 280360, 9, 50) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (256, 425, 1032) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2584) [M::mem_pestat] mean and std.dev: (502.62, 349.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3360) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (191, 296, 429) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 905) [M::mem_pestat] mean and std.dev: (320.72, 160.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1143) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (268, 585, 759) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1741) [M::mem_pestat] mean and std.dev: (488.86, 268.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2232) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 687138 reads in 186.662 CPU sec, 5.930 real sec [M::mem_process_seqs] Processed 687212 reads in 136.597 CPU sec, 4.365 real sec sorting block 176, #reads = 1067601 mem = 536878561 peak = 1225007104 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (38, 280203, 13, 28) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (155, 292, 923) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2459) [M::mem_pestat] mean and std.dev: (465.61, 510.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3227) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (192, 297, 428) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 900) [M::mem_pestat] mean and std.dev: (321.20, 160.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1136) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (460, 517, 936) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1888) [M::mem_pestat] mean and std.dev: (612.33, 342.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2364) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (249, 297, 480) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 942) [M::mem_pestat] mean and std.dev: (314.12, 129.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1173) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 686254 sequences (100000069 bp) in 2.872 CPU sec, 2.902 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (46, 279920, 12, 40) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (160, 320, 503) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1189) [M::mem_pestat] mean and std.dev: (320.50, 231.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1532) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (191, 297, 430) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 908) [M::mem_pestat] mean and std.dev: (321.40, 160.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1147) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (612, 828, 1419) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3033) [M::mem_pestat] mean and std.dev: (940.33, 512.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3840) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (235, 355, 665) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1525) [M::mem_pestat] mean and std.dev: (391.24, 264.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1955) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 685246 sequences (100000160 bp) in 2.440 CPU sec, 2.440 real sec... [M::mem_process_seqs] Processed 686802 reads in 186.762 CPU sec, 5.889 real sec [M::mem_process_seqs] Processed 687030 reads in 130.756 CPU sec, 4.123 real sec sorting block 177, #reads = 1066126 mem = 536881390 peak = 1225007104 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (30, 279712, 15, 43) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (197, 278, 539) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1223) [M::mem_pestat] mean and std.dev: (365.79, 274.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1565) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (194, 301, 434) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 914) [M::mem_pestat] mean and std.dev: (324.89, 162.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1154) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (144, 828, 1314) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3654) [M::mem_pestat] mean and std.dev: (711.73, 598.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4824) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (221, 302, 435) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 863) [M::mem_pestat] mean and std.dev: (289.50, 120.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1077) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 685686 sequences (100000044 bp) in 3.044 CPU sec, 3.072 real sec... [M::process] read 686028 sequences (100000132 bp) in 2.450 CPU sec, 2.452 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (36, 279694, 20, 41) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (179, 258, 388) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 806) [M::mem_pestat] mean and std.dev: (275.74, 124.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1015) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (199, 311, 445) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 937) [M::mem_pestat] mean and std.dev: (333.03, 165.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1183) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (1, 307, 1082) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3244) [M::mem_pestat] mean and std.dev: (480.11, 703.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4325) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (225, 290, 382) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 696) [M::mem_pestat] mean and std.dev: (286.19, 96.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 853) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 686254 reads in 195.755 CPU sec, 6.168 real sec sorting block 178, #reads = 1065550 mem = 536878083 peak = 1225007104 [M::mem_process_seqs] Processed 685246 reads in 220.048 CPU sec, 6.961 real sec [M::process] read 383716 sequences (55887126 bp) in 2.047 CPU sec, 2.066 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (33, 279509, 15, 38) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (183, 252, 351) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 687) [M::mem_pestat] mean and std.dev: (278.26, 140.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 855) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (195, 303, 436) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 918) [M::mem_pestat] mean and std.dev: (326.79, 163.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1159) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (455, 557, 1237) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2801) [M::mem_pestat] mean and std.dev: (727.80, 473.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3583) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (170, 276, 532) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1256) [M::mem_pestat] mean and std.dev: (350.38, 276.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1618) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (54, 279945, 17, 34) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (179, 307, 475) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1067) [M::mem_pestat] mean and std.dev: (316.35, 182.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1363) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (196, 306, 439) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 925) [M::mem_pestat] mean and std.dev: (328.95, 164.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1168) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (299, 1042, 4364) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 12494) [M::mem_pestat] mean and std.dev: (1782.76, 1849.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 16559) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (215, 336, 820) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2030) [M::mem_pestat] mean and std.dev: (491.85, 399.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2635) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 686028 reads in 183.148 CPU sec, 5.877 real sec sorting block 179, #reads = 1066614 mem = 536880562 peak = 1225007104 [M::mem_process_seqs] Processed 685686 reads in 207.946 CPU sec, 6.685 real sec sorting block 180, #reads = 1065622 mem = 536877613 peak = 1225007104 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 156672, 5, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (241, 352, 527) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1099) [M::mem_pestat] mean and std.dev: (360.36, 196.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1385) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (193, 299, 431) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 907) [M::mem_pestat] mean and std.dev: (323.09, 161.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1145) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (152, 197, 475) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1121) [M::mem_pestat] mean and std.dev: (292.21, 169.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1444) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 383716 reads in 61.371 CPU sec, 2.018 real sec os version: Linux 6.12.88 cpu vendor: GenuineIntel signature: 000c06f2 features: bfebfbff 7ffefbff extended: f3bfb7ef fb417ffe amd bits: 2c100800 00000121 brand: INTEL(R) XEON(R) PLATINUM 8559C threads: 31 algo: bwa-mem license: sentieon:klib=31 reads: 192927708 overall: 70018777088 mem 27169.376 user 701.298 sys 933.800 real [main] Version: 0.7.17-r1188 [main] CMD: /opt/conda/share/sentieon-202308.03-3/libexec/bwa mem -K 100000000 -Y -R @RG\tID:A23MHWWLT4.1029_I9B-T1-TDNA-1_A23MHWWLT4_1.L007\tPU:L007\tSM:1029_I9B-T1-TDNA-1_A23MHWWLT4_1\tLB:1029_I9B-T1-TDNA-1_A23MHWWLT4_1\tDS:s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta\tPL:ILLUMINA -t 31 ./BWAIndex/Homo_sapiens_assembly38.fasta.64 1029_I9B-T1-TDNA-1_A23MHWWLT4_1_R1.fastq.gz 1029_I9B-T1-TDNA-1_A23MHWWLT4_1_R2.fastq.gz [main] Real time: 933.842 sec; CPU: 27870.677 sec sorting block 181, #reads = 595390 mem = 300796294 peak = 1225007104 uniq header count 1 merging 182 blocks sw version: sentieon-genomics-202308.03 os version: Linux 6.12.88 cpu vendor: GenuineIntel signature: 000c06f2 features: bfebfbff 7ffefbff extended: f3bfb7ef fb417ffe amd bits: 2c100800 00000121 brand: INTEL(R) XEON(R) PLATINUM 8559C threads: 31 max 192 algo: util-sort license: sentieon:util=1 output file size: 11063641049 output reads: 194137147 bam_mem_sort: 182 calls 83.900 user 1.427 sys 85.687 real bam_write: 182 calls 128.423 user 4.776 sys 139.497 real execute: 1 calls 48.118 user 1.482 sys 1009.790 real merge_files: 1 calls 48.099 user 1.433 sys 75.030 real parse_chunk: 2905 calls 138.228 user 29.815 sys 171.686 real read_chunk: 7848 calls 70.634 user 52.546 sys 846.242 real sort_block: 1 calls 49.992 user 52.066 sys 816.118 real write_chunk: 4941 calls 47.720 user 1.075 sys 73.992 real overall: 3737300992 mem 2905.885 user 106.786 sys 1009.819 real ls: cannot access '*.cram': No such file or directory