cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i 1136_3U6-T1-TDNA-1_A23MHWWLT4_1.md.bam --algo AlignmentStat 1136_3U6-T1-TDNA-1_A23MHWWLT4_1.sentieon.alignment_summary_metrics --algo InsertSizeMetricAlgo 1136_3U6-T1-TDNA-1_A23MHWWLT4_1.sentieon.insert_size_metrics --algo QualDistribution 1136_3U6-T1-TDNA-1_A23MHWWLT4_1.sentieon.quality_distribution_metrics --algo BaseDistributionByCycle 1136_3U6-T1-TDNA-1_A23MHWWLT4_1.sentieon.base_distribution_by_cycle_metrics --algo MeanQualityByCycle 1136_3U6-T1-TDNA-1_A23MHWWLT4_1.sentieon.quality_by_cycle_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:187000001, elapsed 17.0s, est remaining 322.4s, peak mem 5666MB, user 388.9s, sys 4.4s, output queue size 146
progress 10% @chr2:94000001, elapsed 30.7s, est remaining 276.7s, peak mem 8278MB, user 820.3s, sys 6.8s, output queue size 166
progress 15% @chr3:18000001, elapsed 46.2s, est remaining 261.7s, peak mem 10877MB, user 1296.4s, sys 9.1s, output queue size 203
progress 20% @chr3:178000001, elapsed 58.9s, est remaining 235.8s, peak mem 11084MB, user 1688.6s, sys 12.0s, output queue size 283
progress 25% @chr4:133000001, elapsed 70.3s, est remaining 211.0s, peak mem 11229MB, user 2056.3s, sys 13.3s, output queue size 302
progress 30% @chr5:107000001, elapsed 78.8s, est remaining 183.9s, peak mem 11547MB, user 2297.6s, sys 14.1s, output queue size 464
progress 35% @chr6:91000001, elapsed 92.2s, est remaining 171.2s, peak mem 12103MB, user 2675.1s, sys 15.4s, output queue size 625
progress 40% @chr7:66000001, elapsed 108.8s, est remaining 163.1s, peak mem 12947MB, user 3089.9s, sys 16.7s, output queue size 786
progress 45% @chr8:58000001, elapsed 126.5s, est remaining 154.6s, peak mem 13187MB, user 3661.0s, sys 18.6s, output queue size 948
progress 50% @chr9:102000001, elapsed 141.1s, est remaining 141.1s, peak mem 13404MB, user 4102.4s, sys 19.8s, output queue size 366
progress 55% @chr10:103000001, elapsed 159.2s, est remaining 130.3s, peak mem 13722MB, user 4658.5s, sys 21.7s, output queue size 527
progress 60% @chr11:121000001, elapsed 176.1s, est remaining 117.4s, peak mem 13727MB, user 5181.0s, sys 23.1s, output queue size 510
progress 65% @chr13:24000001, elapsed 193.4s, est remaining 104.2s, peak mem 13925MB, user 5676.9s, sys 24.7s, output queue size 672
progress 70% @chr14:86000001, elapsed 203.8s, est remaining 87.3s, peak mem 13928MB, user 5997.2s, sys 25.5s, output queue size 833
progress 75% @chr16:42000001, elapsed 223.9s, est remaining 74.6s, peak mem 14179MB, user 6590.1s, sys 27.2s, output queue size 995
progress 80% @chr18:10000001, elapsed 253.8s, est remaining 63.5s, peak mem 14552MB, user 7456.8s, sys 29.3s, output queue size 623
progress 85% @chr20:23000001, elapsed 281.5s, est remaining 49.7s, peak mem 14552MB, user 8333.7s, sys 31.3s, output queue size 785
progress 90% @chrX:42000001, elapsed 298.6s, est remaining 33.2s, peak mem 14622MB, user 8890.3s, sys 32.9s, output queue size 947
progress 95% @chrY:55000001, elapsed 311.0s, est remaining 16.4s, peak mem 14838MB, user 9294.6s, sys 33.8s, output queue size 675
progress 100% @chr22:23000001, elapsed 353.5s, est remaining 0.0s, peak mem 14838MB, user 9879.8s, sys 35.2s, output queue size 3635
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 192
algo: AlignmentStat InsertSizeMetricAlgo QualDistribution BaseDistributionByCycle MeanQualityByCycle
license: sentieon:Metrics=31
input file size: 99271553910
reads: 1941527573
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1598.422 user 30.071 sys 1625.817 real
done: 1 calls 0.078 user 0.001 sys 0.089 real
exec_no_coor: 1 calls 0.027 user 0.009 sys 0.054 real
execute: 1 calls 0.004 user 0.002 sys 353.635 real
idle: 1111 calls 0.182 user 0.001 sys 1079.253 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 15558942720 mem 9882.115 user 35.706 sys 355.197 real