cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i 1136_4GR-T1-TDNA-1_A23MHWWLT4_1.md.bam --algo AlignmentStat 1136_4GR-T1-TDNA-1_A23MHWWLT4_1.sentieon.alignment_summary_metrics --algo InsertSizeMetricAlgo 1136_4GR-T1-TDNA-1_A23MHWWLT4_1.sentieon.insert_size_metrics --algo QualDistribution 1136_4GR-T1-TDNA-1_A23MHWWLT4_1.sentieon.quality_distribution_metrics --algo BaseDistributionByCycle 1136_4GR-T1-TDNA-1_A23MHWWLT4_1.sentieon.base_distribution_by_cycle_metrics --algo MeanQualityByCycle 1136_4GR-T1-TDNA-1_A23MHWWLT4_1.sentieon.quality_by_cycle_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:11000001, elapsed 8.6s, est remaining 164.0s, peak mem 2614MB, user 201.5s, sys 2.4s, output queue size 150
progress 10% @chr2:94000001, elapsed 16.0s, est remaining 143.9s, peak mem 4053MB, user 424.4s, sys 3.9s, output queue size 166
progress 15% @chr2:238000001, elapsed 23.8s, est remaining 134.8s, peak mem 4552MB, user 678.1s, sys 5.5s, output queue size 210
progress 20% @chr3:176000001, elapsed 30.4s, est remaining 121.7s, peak mem 4555MB, user 877.2s, sys 6.3s, output queue size 283
progress 25% @chr4:124000001, elapsed 35.8s, est remaining 107.4s, peak mem 4615MB, user 1057.2s, sys 7.0s, output queue size 302
progress 30% @chr5:79000001, elapsed 40.0s, est remaining 93.2s, peak mem 4678MB, user 1164.3s, sys 7.4s, output queue size 464
progress 35% @chr6:56000001, elapsed 46.7s, est remaining 86.8s, peak mem 4853MB, user 1360.2s, sys 8.1s, output queue size 625
progress 40% @chr7:65000001, elapsed 54.8s, est remaining 82.2s, peak mem 5064MB, user 1600.6s, sys 9.1s, output queue size 197
progress 45% @chr8:82000001, elapsed 63.0s, est remaining 77.0s, peak mem 5194MB, user 1848.2s, sys 10.0s, output queue size 356
progress 50% @chr9:77000001, elapsed 71.4s, est remaining 71.4s, peak mem 5623MB, user 2073.4s, sys 10.6s, output queue size 366
progress 55% @chr10:99000001, elapsed 80.8s, est remaining 66.1s, peak mem 5812MB, user 2381.9s, sys 11.5s, output queue size 348
progress 60% @chr11:66000001, elapsed 89.8s, est remaining 59.9s, peak mem 5812MB, user 2688.9s, sys 12.3s, output queue size 312
progress 65% @chr13:33000001, elapsed 99.3s, est remaining 53.4s, peak mem 5814MB, user 2962.2s, sys 13.3s, output queue size 474
progress 70% @chr14:35000001, elapsed 104.9s, est remaining 44.9s, peak mem 5843MB, user 3163.1s, sys 13.8s, output queue size 299
progress 75% @chr16:42000001, elapsed 114.0s, est remaining 38.0s, peak mem 5924MB, user 3423.0s, sys 14.8s, output queue size 461
progress 80% @chr18:25000001, elapsed 129.0s, est remaining 32.2s, peak mem 6116MB, user 3818.1s, sys 15.9s, output queue size 623
progress 85% @chr19:47000001, elapsed 143.1s, est remaining 25.3s, peak mem 6165MB, user 4247.2s, sys 17.2s, output queue size 785
progress 90% @chrX:24000001, elapsed 152.2s, est remaining 16.9s, peak mem 6461MB, user 4579.4s, sys 18.0s, output queue size 513
progress 95% @chrY:54000001, elapsed 157.0s, est remaining 8.3s, peak mem 6461MB, user 4729.0s, sys 18.5s, output queue size 675
progress 100% @chr22:23000001, elapsed 178.0s, est remaining 0.0s, peak mem 6461MB, user 4939.3s, sys 19.0s, output queue size 3635
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: bfebfbff 7ffefbff
  extended: f3bfb7ef fb417ffe
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 192
algo: AlignmentStat InsertSizeMetricAlgo QualDistribution BaseDistributionByCycle MeanQualityByCycle
license: sentieon:Metrics=31
input file size: 54881652601
reads: 1048916945
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 863.306 user 16.276 sys 881.874 real
done: 1 calls 0.068 user 0.001 sys 0.071 real
exec_no_coor: 1 calls 0.006 user 0.012 sys 0.034 real
execute: 1 calls 0.005 user 0.003 sys 178.203 real
idle: 627 calls 0.167 user 0.000 sys 595.692 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 6774992896 mem 4941.338 user 19.497 sys 179.529 real