cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i 1136_8DV-T1-TDNA-1_A23MHWWLT4_1.md.bam --algo AlignmentStat 1136_8DV-T1-TDNA-1_A23MHWWLT4_1.sentieon.alignment_summary_metrics --algo InsertSizeMetricAlgo 1136_8DV-T1-TDNA-1_A23MHWWLT4_1.sentieon.insert_size_metrics --algo QualDistribution 1136_8DV-T1-TDNA-1_A23MHWWLT4_1.sentieon.quality_distribution_metrics --algo BaseDistributionByCycle 1136_8DV-T1-TDNA-1_A23MHWWLT4_1.sentieon.base_distribution_by_cycle_metrics --algo MeanQualityByCycle 1136_8DV-T1-TDNA-1_A23MHWWLT4_1.sentieon.quality_by_cycle_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:169000001, elapsed 9.1s, est remaining 172.0s, peak mem 2480MB, user 204.8s, sys 2.1s, output queue size 146
progress 10% @chr2:91000001, elapsed 17.4s, est remaining 156.4s, peak mem 3808MB, user 452.0s, sys 3.6s, output queue size 172
progress 15% @chr3:18000001, elapsed 24.8s, est remaining 140.4s, peak mem 4200MB, user 687.2s, sys 5.0s, output queue size 328
progress 20% @chr3:178000001, elapsed 30.8s, est remaining 123.2s, peak mem 4200MB, user 907.2s, sys 6.0s, output queue size 141
progress 25% @chr4:108000001, elapsed 35.7s, est remaining 107.2s, peak mem 4200MB, user 1057.9s, sys 6.5s, output queue size 302
progress 30% @chr5:94000001, elapsed 39.4s, est remaining 91.9s, peak mem 4200MB, user 1160.4s, sys 6.9s, output queue size 464
progress 35% @chr6:70000001, elapsed 45.3s, est remaining 84.2s, peak mem 4231MB, user 1328.8s, sys 7.5s, output queue size 625
progress 40% @chr7:45000001, elapsed 51.5s, est remaining 77.2s, peak mem 4424MB, user 1523.5s, sys 8.1s, output queue size 195
progress 45% @chr8:78000001, elapsed 58.6s, est remaining 71.6s, peak mem 4530MB, user 1744.1s, sys 8.8s, output queue size 204
progress 50% @chr9:81000001, elapsed 65.9s, est remaining 65.9s, peak mem 4861MB, user 1941.5s, sys 9.5s, output queue size 324
progress 55% @chr10:86000001, elapsed 73.7s, est remaining 60.3s, peak mem 5046MB, user 2178.2s, sys 10.3s, output queue size 348
progress 60% @chr11:134000001, elapsed 81.3s, est remaining 54.2s, peak mem 5046MB, user 2424.5s, sys 11.1s, output queue size 415
progress 65% @chr12:56000001, elapsed 88.4s, est remaining 47.6s, peak mem 5067MB, user 2650.9s, sys 12.0s, output queue size 474
progress 70% @chr13:109000001, elapsed 92.1s, est remaining 39.5s, peak mem 5067MB, user 2792.3s, sys 12.5s, output queue size 299
progress 75% @chr16:42000001, elapsed 99.2s, est remaining 33.1s, peak mem 5067MB, user 2983.3s, sys 13.1s, output queue size 461
progress 80% @chr18:9000001, elapsed 112.4s, est remaining 28.1s, peak mem 5067MB, user 3334.2s, sys 14.0s, output queue size 623
progress 85% @chr20:25000001, elapsed 124.6s, est remaining 22.0s, peak mem 5067MB, user 3732.2s, sys 15.0s, output queue size 351
progress 90% @chrX:15000001, elapsed 132.0s, est remaining 14.7s, peak mem 5067MB, user 3982.3s, sys 15.6s, output queue size 513
progress 95% @chrY:53000001, elapsed 136.8s, est remaining 7.2s, peak mem 5067MB, user 4151.6s, sys 16.1s, output queue size 240
progress 100% @chr22:23000001, elapsed 154.2s, est remaining 0.0s, peak mem 5067MB, user 4300.0s, sys 16.7s, output queue size 3635
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 192
algo: AlignmentStat InsertSizeMetricAlgo QualDistribution BaseDistributionByCycle MeanQualityByCycle
license: sentieon:Metrics=31
input file size: 45110700362
reads: 909143983
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 741.541 user 13.788 sys 753.005 real
done: 1 calls 0.038 user 0.001 sys 0.045 real
exec_no_coor: 1 calls 0.017 user 0.000 sys 0.027 real
execute: 1 calls 0.004 user 0.004 sys 154.314 real
idle: 531 calls 0.173 user 0.000 sys 496.600 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 5313249280 mem 4302.043 user 16.899 sys 155.525 real