This software is licensed to bgold@natera.com by Sentieon Inc. cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/util sort -r Homo_sapiens_assembly38.fasta -t 31 -o 1136_3U6-T1-TDNA-1_A23MHWWLT4_1.bam --sam2bam - This software is licensed to bgold@natera.com by Sentieon Inc. No more license available for sentieon:klib version: sentieon-genomics-202308.03 No more license available for sentieon:klib [M::bwa_idx_load_from_disk] read 3171 ALT contigs No more license available for sentieon:klib No more license available for sentieon:klib No more license available for sentieon:klib No more license available for sentieon:klib No more license available for sentieon:klib No more license available for sentieon:klib No more license available for sentieon:klib No more license available for sentieon:klib No more license available for sentieon:klib No more license available for sentieon:klib No more license available for sentieon:klib No more license available for sentieon:klib [M::main_mem] bwa index loaded in 1717.604 CPU sec, 838.205 real sec [M::process] read 682586 sequences (100000160 bp) in 0.968 CPU sec, 0.973 real sec... [M::process] read 682834 sequences (100000105 bp) in 1.278 CPU sec, 1.283 real sec... [M::process] read 683832 sequences (100000186 bp) in 1.450 CPU sec, 1.448 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (24, 282449, 12, 24) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (198, 273, 466) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1002) [M::mem_pestat] mean and std.dev: (337.91, 234.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1276) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (207, 331, 457) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 957) [M::mem_pestat] mean and std.dev: (345.24, 167.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1207) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (625, 625, 1751) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4003) [M::mem_pestat] mean and std.dev: (826.45, 602.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5129) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (272, 367, 372) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (72, 572) [M::mem_pestat] mean and std.dev: (323.48, 97.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 715) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 681184 sequences (100000101 bp) in 1.469 CPU sec, 1.468 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (36, 282999, 7, 10) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (207, 310, 987) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2547) [M::mem_pestat] mean and std.dev: (478.15, 389.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3327) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (206, 332, 462) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 974) [M::mem_pestat] mean and std.dev: (346.84, 169.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1230) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (241, 315, 315) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (93, 463) [M::mem_pestat] mean and std.dev: (274.67, 74.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 571) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 283814, 5, 20) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (189, 213, 1090) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2892) [M::mem_pestat] mean and std.dev: (469.94, 404.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3793) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (201, 324, 453) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 957) [M::mem_pestat] mean and std.dev: (340.07, 167.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1209) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (265, 354, 784) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1822) [M::mem_pestat] mean and std.dev: (448.89, 245.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2341) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 682586 reads in 238.159 CPU sec, 7.620 real sec [M::mem_process_seqs] Processed 682834 reads in 156.513 CPU sec, 5.072 real sec sorting block 0, #reads = 1078091 mem = 536879781 peak = 589996032 [M::process] read 682968 sequences (100000273 bp) in 1.916 CPU sec, 2.155 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 282422, 8, 12) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (196, 317, 557) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1279) [M::mem_pestat] mean and std.dev: (333.47, 170.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1640) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (213, 341, 472) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 990) [M::mem_pestat] mean and std.dev: (354.54, 170.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1249) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (284, 490, 578) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1166) [M::mem_pestat] mean and std.dev: (483.83, 313.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1736) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 681184 reads in 81.269 CPU sec, 2.569 real sec [M::mem_process_seqs] Processed 683832 reads in 283.947 CPU sec, 9.125 real sec sorting block 1, #reads = 1080246 mem = 536881380 peak = 706695168 [M::process] read 682390 sequences (100000028 bp) in 2.023 CPU sec, 2.154 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (22, 282876, 7, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (177, 221, 389) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 813) [M::mem_pestat] mean and std.dev: (286.86, 145.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1025) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (204, 328, 458) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 966) [M::mem_pestat] mean and std.dev: (344.11, 168.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1220) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (187, 223, 382) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 772) [M::mem_pestat] mean and std.dev: (258.36, 101.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 967) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 682046 sequences (100000044 bp) in 1.356 CPU sec, 1.492 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 282428, 6, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (222, 457, 929) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2343) [M::mem_pestat] mean and std.dev: (588.39, 457.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3050) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (206, 329, 459) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 965) [M::mem_pestat] mean and std.dev: (344.98, 167.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1218) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (220, 340, 514) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1102) [M::mem_pestat] mean and std.dev: (365.20, 180.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1396) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 681722 sequences (100000281 bp) in 1.520 CPU sec, 1.515 real sec... [M::mem_process_seqs] Processed 682968 reads in 167.532 CPU sec, 5.295 real sec [M::mem_process_seqs] Processed 682390 reads in 97.944 CPU sec, 3.105 real sec sorting block 2, #reads = 1080649 mem = 536880769 peak = 720584704 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (29, 282531, 1, 24) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (214, 280, 533) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1171) [M::mem_pestat] mean and std.dev: (353.66, 191.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1490) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (208, 329, 456) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 952) [M::mem_pestat] mean and std.dev: (344.43, 166.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1200) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (165, 322, 518) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1224) [M::mem_pestat] mean and std.dev: (287.81, 152.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1577) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 681274 sequences (100000235 bp) in 2.145 CPU sec, 2.286 real sec... [M::process] read 681584 sequences (100000022 bp) in 1.280 CPU sec, 1.286 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 282022, 7, 22) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (231, 468, 929) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2325) [M::mem_pestat] mean and std.dev: (532.43, 385.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3023) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (208, 330, 458) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 958) [M::mem_pestat] mean and std.dev: (345.72, 166.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1208) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (243, 355, 2028) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5598) [M::mem_pestat] mean and std.dev: (824.91, 826.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7383) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 682046 reads in 157.564 CPU sec, 5.029 real sec sorting block 3, #reads = 1079327 mem = 536881802 peak = 720584704 [M::mem_process_seqs] Processed 681722 reads in 98.518 CPU sec, 3.139 real sec sorting block 4, #reads = 1080158 mem = 536877811 peak = 823611392 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (19, 281644, 1, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (207, 278, 1040) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2706) [M::mem_pestat] mean and std.dev: (472.78, 428.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3539) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::process] read 681240 sequences (100000236 bp) in 1.956 CPU sec, 2.080 real sec... [M::mem_pestat] (25, 50, 75) percentile: (209, 329, 454) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 944) [M::mem_pestat] mean and std.dev: (344.09, 165.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1189) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (274, 428, 540) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1072) [M::mem_pestat] mean and std.dev: (404.28, 182.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1338) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 680734 sequences (100000003 bp) in 1.400 CPU sec, 1.395 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (28, 281722, 4, 17) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (197, 212, 315) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 551) [M::mem_pestat] mean and std.dev: (242.59, 94.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 669) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (208, 328, 454) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 946) [M::mem_pestat] mean and std.dev: (343.42, 164.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1192) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (219, 269, 734) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1764) [M::mem_pestat] mean and std.dev: (396.00, 286.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2279) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 681274 reads in 154.126 CPU sec, 4.918 real sec [M::mem_process_seqs] Processed 681584 reads in 94.358 CPU sec, 3.013 real sec sorting block 5, #reads = 1078418 mem = 536876174 peak = 823611392 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (13, 281927, 9, 17) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (209, 251, 547) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1223) [M::mem_pestat] mean and std.dev: (360.31, 280.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1561) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (209, 329, 454) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 944) [M::mem_pestat] mean and std.dev: (344.69, 165.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1189) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (162, 239, 399) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 873) [M::mem_pestat] mean and std.dev: (250.44, 120.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1110) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 682788 sequences (100000172 bp) in 2.599 CPU sec, 2.746 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (26, 282227, 7, 30) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (177, 255, 534) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1248) [M::mem_pestat] mean and std.dev: (315.72, 172.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1605) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (212, 337, 467) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 977) [M::mem_pestat] mean and std.dev: (352.50, 170.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1232) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (202, 372, 418) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 850) [M::mem_pestat] mean and std.dev: (316.86, 166.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1066) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 681240 reads in 152.743 CPU sec, 4.857 real sec [M::process] read 682370 sequences (100000153 bp) in 1.808 CPU sec, 1.818 real sec... [M::mem_process_seqs] Processed 680734 reads in 96.484 CPU sec, 3.046 real sec sorting block 6, #reads = 1078898 mem = 536883094 peak = 823611392 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 282712, 1, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (199, 364, 541) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1225) [M::mem_pestat] mean and std.dev: (378.13, 223.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1567) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (205, 327, 453) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 949) [M::mem_pestat] mean and std.dev: (342.25, 166.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1197) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (183, 266, 554) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1296) [M::mem_pestat] mean and std.dev: (341.00, 207.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1667) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 682410 sequences (100000271 bp) in 2.500 CPU sec, 2.642 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 282580, 3, 22) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (195, 220, 531) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1203) [M::mem_pestat] mean and std.dev: (308.07, 189.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1539) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (209, 334, 461) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 965) [M::mem_pestat] mean and std.dev: (348.55, 169.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1217) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (326, 349, 439) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (100, 665) [M::mem_pestat] mean and std.dev: (350.60, 85.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 778) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 681674 sequences (100000096 bp) in 1.680 CPU sec, 1.673 real sec... [M::mem_process_seqs] Processed 682788 reads in 145.727 CPU sec, 4.628 real sec [M::mem_process_seqs] Processed 682370 reads in 91.095 CPU sec, 2.884 real sec sorting block 7, #reads = 1079153 mem = 536880070 peak = 823611392 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (11, 283045, 1, 29) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (201, 648, 648) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1542) [M::mem_pestat] mean and std.dev: (408.10, 241.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1989) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (207, 333, 462) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 972) [M::mem_pestat] mean and std.dev: (347.76, 169.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1227) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (149, 296, 1049) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2849) [M::mem_pestat] mean and std.dev: (619.66, 607.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3749) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 682452 sequences (100000161 bp) in 2.291 CPU sec, 2.454 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (10, 282404, 5, 24) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (254, 254, 1211) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3125) [M::mem_pestat] mean and std.dev: (353.00, 328.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4082) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (211, 335, 464) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 970) [M::mem_pestat] mean and std.dev: (350.78, 170.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1223) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (169, 436, 696) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1750) [M::mem_pestat] mean and std.dev: (413.42, 241.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2277) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 682076 sequences (100000212 bp) in 1.370 CPU sec, 1.366 real sec... [M::mem_process_seqs] Processed 682410 reads in 143.283 CPU sec, 4.578 real sec sorting block 8, #reads = 1081926 mem = 536878614 peak = 823611392 [M::mem_process_seqs] Processed 681674 reads in 91.391 CPU sec, 2.901 real sec sorting block 9, #reads = 1082109 mem = 536878134 peak = 895717376 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (10, 282851, 1, 19) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (178, 355, 680) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1684) [M::mem_pestat] mean and std.dev: (296.75, 162.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2186) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (206, 330, 458) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 962) [M::mem_pestat] mean and std.dev: (345.16, 168.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1214) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (123, 163, 260) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 534) [M::mem_pestat] mean and std.dev: (193.61, 87.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 671) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 680502 sequences (100000240 bp) in 2.701 CPU sec, 2.860 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (23, 282792, 5, 28) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (157, 279, 350) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 736) [M::mem_pestat] mean and std.dev: (254.00, 126.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 929) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (208, 331, 459) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 961) [M::mem_pestat] mean and std.dev: (346.45, 168.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1212) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (187, 393, 756) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1894) [M::mem_pestat] mean and std.dev: (455.48, 367.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2463) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 682452 reads in 148.125 CPU sec, 4.699 real sec [M::process] read 682154 sequences (100000073 bp) in 1.811 CPU sec, 1.822 real sec... [M::mem_process_seqs] Processed 682076 reads in 92.757 CPU sec, 2.924 real sec sorting block 10, #reads = 1080910 mem = 536880449 peak = 895717376 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (12, 282322, 4, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (161, 172, 229) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (25, 365) [M::mem_pestat] mean and std.dev: (188.09, 56.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 433) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (216, 341, 467) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 969) [M::mem_pestat] mean and std.dev: (354.31, 169.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1220) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (250, 421, 497) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 991) [M::mem_pestat] mean and std.dev: (336.07, 133.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1238) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 682186 sequences (100000166 bp) in 2.541 CPU sec, 2.712 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 282505, 10, 23) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (185, 507, 5565) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 16325) [M::mem_pestat] mean and std.dev: (1840.00, 2480.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 21705) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (207, 329, 458) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 960) [M::mem_pestat] mean and std.dev: (345.81, 168.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1211) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (214, 578, 1469) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3979) [M::mem_pestat] mean and std.dev: (981.80, 989.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5234) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (248, 391, 615) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1349) [M::mem_pestat] mean and std.dev: (395.64, 191.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1716) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 681036 sequences (100000154 bp) in 1.380 CPU sec, 1.387 real sec... [M::mem_process_seqs] Processed 680502 reads in 150.713 CPU sec, 4.799 real sec [M::mem_process_seqs] Processed 682154 reads in 95.932 CPU sec, 3.043 real sec sorting block 11, #reads = 1080429 mem = 536880962 peak = 895717376 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (13, 282744, 2, 20) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (308, 378, 785) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1739) [M::mem_pestat] mean and std.dev: (538.38, 319.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2216) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (206, 325, 453) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 947) [M::mem_pestat] mean and std.dev: (343.10, 167.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1194) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (251, 315, 541) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1121) [M::mem_pestat] mean and std.dev: (362.32, 172.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1411) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 681726 sequences (100000006 bp) in 2.819 CPU sec, 3.004 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 282150, 7, 6) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (200, 222, 391) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 773) [M::mem_pestat] mean and std.dev: (259.53, 136.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 964) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (212, 333, 460) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 956) [M::mem_pestat] mean and std.dev: (349.16, 168.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1204) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] skip orientation RR as there are not enough pairs [M::mem_pestat] skip orientation FF [M::mem_process_seqs] Processed 682186 reads in 142.200 CPU sec, 4.529 real sec [M::mem_process_seqs] Processed 681036 reads in 87.436 CPU sec, 2.760 real sec sorting block 12, #reads = 1079454 mem = 536885072 peak = 895717376 [M::process] read 681938 sequences (100000239 bp) in 2.228 CPU sec, 2.343 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (25, 282353, 5, 12) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (178, 260, 555) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1309) [M::mem_pestat] mean and std.dev: (339.33, 203.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1686) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (207, 326, 453) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 945) [M::mem_pestat] mean and std.dev: (343.77, 167.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1191) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (228, 397, 1719) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4701) [M::mem_pestat] mean and std.dev: (859.92, 923.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6192) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 683592 sequences (100000083 bp) in 2.639 CPU sec, 2.793 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (9, 281971, 7, 16) [M::mem_pestat] skip orientation FF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (207, 329, 458) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 960) [M::mem_pestat] mean and std.dev: (346.15, 169.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1211) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (203, 299, 454) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 956) [M::mem_pestat] mean and std.dev: (283.21, 114.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1207) [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 681726 reads in 136.565 CPU sec, 4.365 real sec sorting block 13, #reads = 1079664 mem = 536884851 peak = 895717376 [M::mem_process_seqs] Processed 681938 reads in 85.992 CPU sec, 2.719 real sec [M::process] read 683662 sequences (100000120 bp) in 2.317 CPU sec, 2.478 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (24, 284040, 3, 27) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (149, 335, 944) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2534) [M::mem_pestat] mean and std.dev: (470.39, 401.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3329) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (202, 320, 446) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 934) [M::mem_pestat] mean and std.dev: (336.88, 164.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1178) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (222, 253, 332) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (2, 552) [M::mem_pestat] mean and std.dev: (271.64, 98.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 665) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 14, #reads = 1079183 mem = 536879186 peak = 895717376 [M::process] read 682280 sequences (100000209 bp) in 2.040 CPU sec, 2.157 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 282692, 8, 17) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (141, 182, 929) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2505) [M::mem_pestat] mean and std.dev: (380.81, 332.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3293) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (202, 320, 442) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 922) [M::mem_pestat] mean and std.dev: (334.47, 161.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1162) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (120, 216, 301) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 663) [M::mem_pestat] mean and std.dev: (222.35, 106.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 844) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 683592 reads in 136.816 CPU sec, 4.373 real sec [M::mem_process_seqs] Processed 683662 reads in 86.890 CPU sec, 2.746 real sec [M::process] read 681928 sequences (100000130 bp) in 2.200 CPU sec, 2.358 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (23, 283252, 7, 21) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (144, 212, 299) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 609) [M::mem_pestat] mean and std.dev: (220.14, 100.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 764) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (208, 332, 455) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 949) [M::mem_pestat] mean and std.dev: (344.06, 164.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1196) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (312, 332, 526) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 954) [M::mem_pestat] mean and std.dev: (357.37, 127.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1168) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 15, #reads = 1079623 mem = 536878529 peak = 895717376 [M::process] read 682812 sequences (100000015 bp) in 2.230 CPU sec, 2.358 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (26, 282603, 3, 13) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (147, 259, 528) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1290) [M::mem_pestat] mean and std.dev: (353.46, 276.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1671) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (211, 335, 459) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 955) [M::mem_pestat] mean and std.dev: (347.02, 165.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1203) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (276, 313, 491) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 921) [M::mem_pestat] mean and std.dev: (340.92, 141.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1136) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 682280 reads in 133.536 CPU sec, 4.266 real sec [M::mem_process_seqs] Processed 681928 reads in 84.543 CPU sec, 2.674 real sec sorting block 16, #reads = 1079613 mem = 536879800 peak = 895717376 [M::process] read 682530 sequences (100000293 bp) in 2.257 CPU sec, 2.421 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 282089, 4, 31) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (151, 222, 830) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2188) [M::mem_pestat] mean and std.dev: (382.00, 331.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2867) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (205, 327, 452) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 946) [M::mem_pestat] mean and std.dev: (341.53, 165.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1193) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (196, 276, 411) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 841) [M::mem_pestat] mean and std.dev: (317.40, 144.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1056) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 680778 sequences (100000218 bp) in 1.974 CPU sec, 2.217 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (31, 282264, 6, 38) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (161, 231, 331) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 671) [M::mem_pestat] mean and std.dev: (246.10, 95.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 841) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (206, 328, 455) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 953) [M::mem_pestat] mean and std.dev: (343.35, 166.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1202) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (241, 311, 377) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 649) [M::mem_pestat] mean and std.dev: (269.00, 77.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 785) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 682812 reads in 136.859 CPU sec, 4.369 real sec [M::mem_process_seqs] Processed 682530 reads in 86.612 CPU sec, 2.736 real sec sorting block 17, #reads = 1080263 mem = 536880161 peak = 895717376 [M::process] read 682162 sequences (100000284 bp) in 2.201 CPU sec, 2.327 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 282293, 3, 31) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (195, 244, 572) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1326) [M::mem_pestat] mean and std.dev: (360.62, 259.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1703) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (215, 341, 465) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 965) [M::mem_pestat] mean and std.dev: (352.57, 166.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1215) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (296, 395, 1735) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4613) [M::mem_pestat] mean and std.dev: (1076.00, 999.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6052) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 18, #reads = 1079991 mem = 536886213 peak = 895717376 [M::process] read 682116 sequences (100000186 bp) in 2.299 CPU sec, 2.415 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (7, 282425, 6, 19) [M::mem_pestat] skip orientation FF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (207, 329, 456) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 954) [M::mem_pestat] mean and std.dev: (344.43, 166.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1203) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (206, 220, 276) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (66, 416) [M::mem_pestat] mean and std.dev: (207.75, 62.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 486) [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 680778 reads in 137.015 CPU sec, 4.370 real sec [M::mem_process_seqs] Processed 682162 reads in 87.048 CPU sec, 2.747 real sec [M::process] read 682260 sequences (100000245 bp) in 2.244 CPU sec, 2.382 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (31, 282082, 1, 22) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (216, 266, 424) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 840) [M::mem_pestat] mean and std.dev: (329.33, 183.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1065) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (207, 327, 455) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 951) [M::mem_pestat] mean and std.dev: (343.82, 166.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1199) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (239, 348, 490) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 992) [M::mem_pestat] mean and std.dev: (373.00, 144.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1243) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 19, #reads = 1079217 mem = 536878442 peak = 895717376 [M::process] read 682058 sequences (100000139 bp) in 1.962 CPU sec, 2.159 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 282169, 8, 43) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (140, 251, 441) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1043) [M::mem_pestat] mean and std.dev: (249.33, 149.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1344) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (206, 324, 450) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 938) [M::mem_pestat] mean and std.dev: (341.00, 165.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1182) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (281, 368, 621) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1301) [M::mem_pestat] mean and std.dev: (397.10, 247.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1641) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 682116 reads in 140.238 CPU sec, 4.466 real sec [M::mem_process_seqs] Processed 682260 reads in 87.785 CPU sec, 2.764 real sec [M::process] read 681988 sequences (100000087 bp) in 1.598 CPU sec, 1.654 real sec... sorting block 20, #reads = 1080486 mem = 536879303 peak = 895717376 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (13, 282004, 3, 22) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (204, 301, 1393) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3771) [M::mem_pestat] mean and std.dev: (488.08, 472.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4960) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (206, 326, 452) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 944) [M::mem_pestat] mean and std.dev: (342.24, 166.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1190) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (246, 337, 565) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1203) [M::mem_pestat] mean and std.dev: (377.60, 233.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1522) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 682610 sequences (100000073 bp) in 2.202 CPU sec, 2.343 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (20, 282678, 3, 7) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (242, 400, 582) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1262) [M::mem_pestat] mean and std.dev: (350.59, 140.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1602) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (207, 328, 457) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 957) [M::mem_pestat] mean and std.dev: (345.21, 168.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1207) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] skip orientation RR as there are not enough pairs [M::mem_pestat] skip orientation FF [M::mem_process_seqs] Processed 682058 reads in 136.993 CPU sec, 4.363 real sec [M::mem_process_seqs] Processed 681988 reads in 85.277 CPU sec, 2.685 real sec [M::process] read 681298 sequences (100000137 bp) in 1.715 CPU sec, 1.768 real sec... sorting block 21, #reads = 1080076 mem = 536881080 peak = 895717376 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (13, 282515, 7, 23) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (157, 227, 385) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 841) [M::mem_pestat] mean and std.dev: (252.08, 126.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1069) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (205, 325, 451) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 943) [M::mem_pestat] mean and std.dev: (341.32, 165.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1189) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (206, 245, 387) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 749) [M::mem_pestat] mean and std.dev: (288.32, 155.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 930) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 682168 sequences (100000161 bp) in 2.113 CPU sec, 2.225 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 281846, 2, 11) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (209, 354, 720) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1742) [M::mem_pestat] mean and std.dev: (375.73, 230.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2253) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (211, 332, 451) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 931) [M::mem_pestat] mean and std.dev: (343.84, 161.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1171) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (240, 270, 578) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1254) [M::mem_pestat] mean and std.dev: (400.82, 270.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1592) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 682610 reads in 134.960 CPU sec, 4.290 real sec [M::process] read 680524 sequences (100000209 bp) in 1.491 CPU sec, 1.507 real sec... sorting block 22, #reads = 1080096 mem = 536882077 peak = 895717376 [M::mem_process_seqs] Processed 681298 reads in 85.021 CPU sec, 2.677 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (27, 281976, 3, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (187, 229, 610) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1456) [M::mem_pestat] mean and std.dev: (357.19, 272.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1879) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (207, 327, 446) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 924) [M::mem_pestat] mean and std.dev: (339.31, 161.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1163) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (126, 171, 220) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 408) [M::mem_pestat] mean and std.dev: (167.77, 62.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 502) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 23, #reads = 1079662 mem = 536878391 peak = 946089984 [M::process] read 683030 sequences (100000157 bp) in 2.277 CPU sec, 2.413 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 281393, 0, 17) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (221, 232, 283) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (97, 407) [M::mem_pestat] mean and std.dev: (220.14, 42.60) [M::mem_pestat] low and high boundaries for proper pairs: (35, 469) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (217, 342, 465) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 961) [M::mem_pestat] mean and std.dev: (353.50, 166.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1209) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (233, 452, 452) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 890) [M::mem_pestat] mean and std.dev: (366.76, 124.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1109) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 683178 sequences (100000027 bp) in 1.410 CPU sec, 1.414 real sec... [M::mem_process_seqs] Processed 682168 reads in 133.593 CPU sec, 4.239 real sec [M::mem_process_seqs] Processed 680524 reads in 83.920 CPU sec, 2.648 real sec sorting block 24, #reads = 1080361 mem = 536880269 peak = 946089984 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (25, 282368, 6, 13) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (170, 410, 548) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1304) [M::mem_pestat] mean and std.dev: (321.10, 166.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1682) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (205, 327, 451) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 943) [M::mem_pestat] mean and std.dev: (340.63, 164.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1189) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (171, 249, 556) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1326) [M::mem_pestat] mean and std.dev: (339.15, 274.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1711) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 682114 sequences (100000226 bp) in 2.291 CPU sec, 2.413 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 281948, 8, 19) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (121, 233, 389) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 925) [M::mem_pestat] mean and std.dev: (256.55, 149.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1193) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (203, 323, 448) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 938) [M::mem_pestat] mean and std.dev: (338.16, 164.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1183) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (204, 205, 471) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1005) [M::mem_pestat] mean and std.dev: (257.69, 163.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1272) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 681668 sequences (100000277 bp) in 1.420 CPU sec, 1.427 real sec... [M::mem_process_seqs] Processed 683030 reads in 135.935 CPU sec, 4.311 real sec [M::mem_process_seqs] Processed 683178 reads in 86.006 CPU sec, 2.721 real sec sorting block 25, #reads = 1080166 mem = 536879625 peak = 946089984 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (25, 281973, 5, 29) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (255, 327, 571) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1203) [M::mem_pestat] mean and std.dev: (362.59, 170.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1519) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (207, 330, 455) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 951) [M::mem_pestat] mean and std.dev: (343.85, 165.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1199) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (237, 364, 460) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 906) [M::mem_pestat] mean and std.dev: (339.07, 166.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1129) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 681280 sequences (100000071 bp) in 2.354 CPU sec, 2.504 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 282083, 7, 22) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (173, 197, 320) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 614) [M::mem_pestat] mean and std.dev: (232.35, 93.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 761) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (209, 332, 459) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 959) [M::mem_pestat] mean and std.dev: (346.29, 165.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1209) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (236, 300, 312) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (84, 464) [M::mem_pestat] mean and std.dev: (284.64, 67.71) [M::mem_pestat] low and high boundaries for proper pairs: (8, 555) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 682084 sequences (100000267 bp) in 1.470 CPU sec, 1.466 real sec... [M::mem_process_seqs] Processed 682114 reads in 138.012 CPU sec, 4.376 real sec [M::mem_process_seqs] Processed 681668 reads in 86.168 CPU sec, 2.722 real sec sorting block 26, #reads = 1079571 mem = 536876603 peak = 946089984 [M::process] read 682564 sequences (100000213 bp) in 2.456 CPU sec, 2.607 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (14, 282350, 7, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (224, 296, 458) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 926) [M::mem_pestat] mean and std.dev: (392.36, 209.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1232) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (206, 326, 451) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 941) [M::mem_pestat] mean and std.dev: (341.46, 164.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1186) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (155, 480, 526) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1268) [M::mem_pestat] mean and std.dev: (323.82, 170.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1639) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 681976 sequences (100000204 bp) in 1.480 CPU sec, 1.476 real sec... [M::mem_process_seqs] Processed 682084 reads in 81.356 CPU sec, 2.571 real sec sorting block 27, #reads = 1080301 mem = 536878541 peak = 946089984 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 281483, 7, 21) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (218, 352, 848) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2108) [M::mem_pestat] mean and std.dev: (548.00, 553.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2763) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (211, 335, 462) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 964) [M::mem_pestat] mean and std.dev: (348.59, 166.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1215) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (229, 309, 659) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1519) [M::mem_pestat] mean and std.dev: (350.68, 180.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1949) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (29, 282624, 7, 22) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (289, 339, 451) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 775) [M::mem_pestat] mean and std.dev: (349.76, 113.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 937) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (204, 322, 449) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 939) [M::mem_pestat] mean and std.dev: (338.88, 164.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1184) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (215, 319, 495) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1055) [M::mem_pestat] mean and std.dev: (298.58, 137.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1335) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 681280 reads in 217.484 CPU sec, 6.913 real sec [M::mem_process_seqs] Processed 682564 reads in 101.762 CPU sec, 3.232 real sec [M::process] read 683986 sequences (100000218 bp) in 1.945 CPU sec, 1.972 real sec... sorting block 28, #reads = 1078890 mem = 536878701 peak = 1035714560 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 281973, 5, 24) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (327, 331, 566) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1044) [M::mem_pestat] mean and std.dev: (350.20, 160.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1283) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (205, 325, 453) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 949) [M::mem_pestat] mean and std.dev: (341.94, 165.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1197) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (249, 330, 378) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 636) [M::mem_pestat] mean and std.dev: (281.90, 100.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 765) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 684760 sequences (100000213 bp) in 2.507 CPU sec, 2.662 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (24, 283383, 3, 25) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (147, 199, 510) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1236) [M::mem_pestat] mean and std.dev: (281.35, 212.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1599) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (198, 317, 448) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 948) [M::mem_pestat] mean and std.dev: (336.68, 167.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1198) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (249, 265, 527) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1083) [M::mem_pestat] mean and std.dev: (342.74, 234.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1361) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 681976 reads in 138.962 CPU sec, 4.412 real sec [M::process] read 686152 sequences (100000044 bp) in 1.554 CPU sec, 1.570 real sec... sorting block 29, #reads = 1079333 mem = 536879250 peak = 1035714560 [M::mem_process_seqs] Processed 683986 reads in 87.936 CPU sec, 2.775 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (20, 284066, 9, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (138, 235, 571) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1437) [M::mem_pestat] mean and std.dev: (405.45, 352.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1870) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (197, 321, 461) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 989) [M::mem_pestat] mean and std.dev: (341.17, 171.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1253) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (221, 292, 404) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 770) [M::mem_pestat] mean and std.dev: (322.43, 141.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 953) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 30, #reads = 1078475 mem = 536878684 peak = 1035714560 [M::process] read 684406 sequences (100000146 bp) in 2.181 CPU sec, 2.316 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 284754, 10, 27) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (339, 346, 446) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (125, 660) [M::mem_pestat] mean and std.dev: (376.89, 126.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 882) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (191, 310, 445) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 953) [M::mem_pestat] mean and std.dev: (330.67, 166.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1207) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (160, 662, 908) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2404) [M::mem_pestat] mean and std.dev: (568.80, 342.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3152) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (147, 269, 654) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1668) [M::mem_pestat] mean and std.dev: (306.09, 235.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2175) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 685640 sequences (100000010 bp) in 1.490 CPU sec, 1.490 real sec... [M::mem_process_seqs] Processed 684760 reads in 142.749 CPU sec, 4.535 real sec [M::mem_process_seqs] Processed 686152 reads in 89.877 CPU sec, 2.835 real sec sorting block 31, #reads = 1077925 mem = 536880368 peak = 1035714560 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 283523, 1, 24) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (133, 199, 430) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1024) [M::mem_pestat] mean and std.dev: (249.94, 157.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1321) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (198, 321, 454) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 966) [M::mem_pestat] mean and std.dev: (338.29, 167.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1222) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (282, 347, 393) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (60, 615) [M::mem_pestat] mean and std.dev: (306.55, 80.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 726) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 684446 sequences (100000151 bp) in 2.492 CPU sec, 2.615 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (27, 283943, 2, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (192, 265, 656) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1584) [M::mem_pestat] mean and std.dev: (416.74, 327.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2048) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (192, 310, 443) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 945) [M::mem_pestat] mean and std.dev: (329.92, 164.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1196) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (232, 326, 556) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1204) [M::mem_pestat] mean and std.dev: (357.47, 237.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1528) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 683042 sequences (100000006 bp) in 1.470 CPU sec, 1.475 real sec... [M::mem_process_seqs] Processed 684406 reads in 142.102 CPU sec, 4.504 real sec [M::mem_process_seqs] Processed 685640 reads in 90.443 CPU sec, 2.852 real sec sorting block 32, #reads = 1078219 mem = 536878784 peak = 1035714560 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (23, 283523, 9, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (225, 431, 775) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1875) [M::mem_pestat] mean and std.dev: (435.73, 244.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2425) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (198, 320, 454) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 966) [M::mem_pestat] mean and std.dev: (338.12, 167.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1222) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (137, 248, 865) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2321) [M::mem_pestat] mean and std.dev: (317.92, 273.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3049) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 682352 sequences (100000288 bp) in 2.483 CPU sec, 2.607 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (29, 283292, 5, 30) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (169, 239, 409) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 889) [M::mem_pestat] mean and std.dev: (259.48, 114.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1129) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (204, 330, 463) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 981) [M::mem_pestat] mean and std.dev: (345.60, 168.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1240) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (199, 308, 488) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1066) [M::mem_pestat] mean and std.dev: (267.70, 112.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1355) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 681750 sequences (100000115 bp) in 1.480 CPU sec, 1.480 real sec... [M::mem_process_seqs] Processed 684446 reads in 145.176 CPU sec, 4.602 real sec [M::mem_process_seqs] Processed 683042 reads in 90.912 CPU sec, 2.873 real sec sorting block 33, #reads = 1076694 mem = 536878419 peak = 1035714560 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (27, 282908, 1, 27) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (291, 540, 604) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1230) [M::mem_pestat] mean and std.dev: (407.14, 147.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1543) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (206, 329, 458) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 962) [M::mem_pestat] mean and std.dev: (343.52, 165.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1214) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (189, 235, 348) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 666) [M::mem_pestat] mean and std.dev: (242.48, 76.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 825) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 682758 sequences (100000301 bp) in 2.494 CPU sec, 2.632 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (19, 282765, 2, 33) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (334, 456, 610) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1162) [M::mem_pestat] mean and std.dev: (480.05, 308.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1713) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (209, 334, 464) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 974) [M::mem_pestat] mean and std.dev: (348.18, 167.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1229) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (206, 353, 453) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 947) [M::mem_pestat] mean and std.dev: (306.57, 109.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1194) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 681946 sequences (100000003 bp) in 1.490 CPU sec, 1.491 real sec... [M::mem_process_seqs] Processed 682352 reads in 146.353 CPU sec, 4.643 real sec sorting block 34, #reads = 1076266 mem = 536878146 peak = 1035714560 [M::mem_process_seqs] Processed 681750 reads in 92.702 CPU sec, 2.931 real sec sorting block 35, #reads = 1075941 mem = 536878816 peak = 1063997440 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (20, 282622, 3, 24) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (168, 239, 390) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 834) [M::mem_pestat] mean and std.dev: (260.26, 120.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1056) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (204, 324, 454) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 954) [M::mem_pestat] mean and std.dev: (340.22, 164.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1204) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (155, 477, 1753) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4949) [M::mem_pestat] mean and std.dev: (789.52, 794.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6547) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 684902 sequences (100000182 bp) in 2.476 CPU sec, 2.598 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (12, 282967, 5, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (231, 236, 1258) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3312) [M::mem_pestat] mean and std.dev: (549.75, 456.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4339) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (206, 329, 462) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 974) [M::mem_pestat] mean and std.dev: (346.07, 168.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1230) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (150, 302, 472) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1116) [M::mem_pestat] mean and std.dev: (316.71, 185.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1438) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 688576 sequences (100000241 bp) in 1.540 CPU sec, 1.541 real sec... [M::mem_process_seqs] Processed 682758 reads in 145.363 CPU sec, 4.607 real sec [M::mem_process_seqs] Processed 681946 reads in 90.016 CPU sec, 2.842 real sec sorting block 36, #reads = 1075156 mem = 536879696 peak = 1063997440 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (10, 284870, 7, 12) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (200, 294, 820) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2060) [M::mem_pestat] mean and std.dev: (482.30, 334.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2680) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (196, 316, 450) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 958) [M::mem_pestat] mean and std.dev: (335.87, 167.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1212) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (151, 203, 283) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 547) [M::mem_pestat] mean and std.dev: (181.40, 61.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 679) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 686794 sequences (100000170 bp) in 2.429 CPU sec, 2.533 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 285733, 2, 29) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (196, 343, 705) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1723) [M::mem_pestat] mean and std.dev: (302.36, 163.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2232) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (185, 297, 425) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 905) [M::mem_pestat] mean and std.dev: (316.85, 158.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1145) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (195, 220, 855) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2175) [M::mem_pestat] mean and std.dev: (413.31, 330.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2835) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 685502 sequences (100000153 bp) in 1.490 CPU sec, 1.490 real sec... [M::mem_process_seqs] Processed 684902 reads in 152.830 CPU sec, 4.854 real sec [M::mem_process_seqs] Processed 688576 reads in 98.694 CPU sec, 3.120 real sec sorting block 37, #reads = 1076385 mem = 536881044 peak = 1063997440 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (22, 284753, 6, 20) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (161, 285, 407) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 899) [M::mem_pestat] mean and std.dev: (302.59, 172.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1145) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (189, 302, 428) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 906) [M::mem_pestat] mean and std.dev: (321.29, 159.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1145) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (225, 241, 409) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 777) [M::mem_pestat] mean and std.dev: (252.94, 85.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 961) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 686390 sequences (100000050 bp) in 2.321 CPU sec, 2.429 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 284551, 4, 29) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (316, 440, 3015) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 8413) [M::mem_pestat] mean and std.dev: (1377.47, 1598.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 11112) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (194, 312, 438) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 926) [M::mem_pestat] mean and std.dev: (328.70, 161.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1170) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (217, 332, 536) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1174) [M::mem_pestat] mean and std.dev: (388.52, 247.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1493) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 683676 sequences (100000009 bp) in 1.480 CPU sec, 1.474 real sec... [M::mem_process_seqs] Processed 686794 reads in 146.945 CPU sec, 4.665 real sec sorting block 38, #reads = 1073062 mem = 536881171 peak = 1063997440 [M::mem_process_seqs] Processed 685502 reads in 91.341 CPU sec, 2.885 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (23, 284792, 6, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (168, 232, 419) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 921) [M::mem_pestat] mean and std.dev: (256.76, 160.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1172) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (191, 306, 433) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 917) [M::mem_pestat] mean and std.dev: (324.60, 161.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1159) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (142, 232, 325) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 691) [M::mem_pestat] mean and std.dev: (214.79, 76.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 874) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 39, #reads = 1075245 mem = 536879403 peak = 1063997440 [M::process] read 683756 sequences (100000018 bp) in 2.516 CPU sec, 2.618 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (20, 283693, 5, 23) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (207, 547, 917) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2337) [M::mem_pestat] mean and std.dev: (541.40, 287.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3047) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (202, 327, 458) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 970) [M::mem_pestat] mean and std.dev: (342.62, 168.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1226) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (233, 304, 489) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1001) [M::mem_pestat] mean and std.dev: (373.35, 224.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1270) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 682552 sequences (100000043 bp) in 1.490 CPU sec, 1.487 real sec... [M::mem_process_seqs] Processed 686390 reads in 145.207 CPU sec, 4.604 real sec [M::mem_process_seqs] Processed 683676 reads in 92.794 CPU sec, 2.936 real sec sorting block 40, #reads = 1076378 mem = 536877952 peak = 1063997440 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (22, 283584, 5, 38) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (222, 363, 703) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1665) [M::mem_pestat] mean and std.dev: (385.05, 276.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2146) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (201, 324, 455) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 963) [M::mem_pestat] mean and std.dev: (340.99, 168.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1217) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (187, 326, 441) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 949) [M::mem_pestat] mean and std.dev: (308.79, 128.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1203) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 682078 sequences (100000144 bp) in 2.523 CPU sec, 2.629 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (23, 282938, 3, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (176, 249, 338) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 662) [M::mem_pestat] mean and std.dev: (224.89, 78.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 824) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (205, 329, 461) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 973) [M::mem_pestat] mean and std.dev: (345.48, 169.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1229) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (165, 344, 478) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1104) [M::mem_pestat] mean and std.dev: (331.06, 202.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1417) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 682800 sequences (100000285 bp) in 1.470 CPU sec, 1.475 real sec... [M::mem_process_seqs] Processed 683756 reads in 143.728 CPU sec, 4.562 real sec [M::mem_process_seqs] Processed 682552 reads in 91.374 CPU sec, 2.885 real sec sorting block 41, #reads = 1074928 mem = 536878208 peak = 1063997440 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (13, 283147, 9, 21) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (229, 448, 570) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1252) [M::mem_pestat] mean and std.dev: (390.92, 206.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1593) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (208, 333, 467) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 985) [M::mem_pestat] mean and std.dev: (350.17, 171.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1244) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (262, 287, 349) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (88, 523) [M::mem_pestat] mean and std.dev: (277.68, 68.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 610) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 683168 sequences (100000145 bp) in 2.480 CPU sec, 2.560 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (20, 283341, 5, 29) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (208, 449, 865) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2179) [M::mem_pestat] mean and std.dev: (399.94, 259.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2836) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (204, 329, 466) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 990) [M::mem_pestat] mean and std.dev: (347.54, 172.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1252) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (253, 272, 527) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1075) [M::mem_pestat] mean and std.dev: (300.42, 126.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1349) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 686878 sequences (100000040 bp) in 1.460 CPU sec, 1.466 real sec... [M::mem_process_seqs] Processed 682078 reads in 141.919 CPU sec, 4.497 real sec [M::mem_process_seqs] Processed 682800 reads in 89.552 CPU sec, 2.829 real sec sorting block 42, #reads = 1074828 mem = 536883851 peak = 1063997440 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (22, 283818, 2, 25) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (140, 266, 388) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 884) [M::mem_pestat] mean and std.dev: (297.59, 204.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1132) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (202, 324, 462) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 982) [M::mem_pestat] mean and std.dev: (345.01, 172.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1242) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (242, 486, 1277) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3347) [M::mem_pestat] mean and std.dev: (545.62, 421.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4382) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 685034 sequences (100000023 bp) in 2.341 CPU sec, 2.461 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (19, 284377, 7, 19) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (264, 340, 437) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 783) [M::mem_pestat] mean and std.dev: (361.67, 142.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 956) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (190, 305, 434) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 922) [M::mem_pestat] mean and std.dev: (324.08, 161.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1166) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (313, 636, 943) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2203) [M::mem_pestat] mean and std.dev: (693.95, 432.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2833) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 683134 sequences (100000074 bp) in 1.530 CPU sec, 1.522 real sec... [M::mem_process_seqs] Processed 683168 reads in 148.892 CPU sec, 4.728 real sec sorting block 43, #reads = 1076188 mem = 536879424 peak = 1063997440 [M::mem_process_seqs] Processed 686878 reads in 90.639 CPU sec, 2.861 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (26, 284020, 0, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (260, 365, 661) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1463) [M::mem_pestat] mean and std.dev: (453.27, 243.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1864) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (195, 315, 443) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 939) [M::mem_pestat] mean and std.dev: (331.76, 163.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1187) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (169, 276, 540) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1282) [M::mem_pestat] mean and std.dev: (360.07, 237.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1653) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 44, #reads = 1073238 mem = 536879631 peak = 1063997440 [M::process] read 686062 sequences (100000231 bp) in 2.237 CPU sec, 2.345 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (29, 283244, 8, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (215, 284, 325) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 545) [M::mem_pestat] mean and std.dev: (271.59, 96.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 657) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (203, 328, 453) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 953) [M::mem_pestat] mean and std.dev: (340.68, 164.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1203) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (213, 305, 425) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 849) [M::mem_pestat] mean and std.dev: (256.36, 83.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1061) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 685034 reads in 136.391 CPU sec, 4.333 real sec [M::process] read 685102 sequences (100000028 bp) in 1.490 CPU sec, 1.497 real sec... [M::mem_process_seqs] Processed 683134 reads in 86.536 CPU sec, 2.729 real sec sorting block 45, #reads = 1079216 mem = 536879471 peak = 1063997440 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (20, 284343, 2, 22) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (211, 340, 507) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1099) [M::mem_pestat] mean and std.dev: (334.63, 136.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1395) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (192, 306, 430) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 906) [M::mem_pestat] mean and std.dev: (323.71, 158.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1144) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (196, 380, 928) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2392) [M::mem_pestat] mean and std.dev: (601.50, 525.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3124) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 683668 sequences (100000036 bp) in 2.506 CPU sec, 2.626 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (12, 284481, 15, 35) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (331, 331, 445) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (103, 673) [M::mem_pestat] mean and std.dev: (319.09, 112.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 787) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (195, 311, 434) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 912) [M::mem_pestat] mean and std.dev: (327.19, 159.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1151) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (217, 241, 1081) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2809) [M::mem_pestat] mean and std.dev: (660.73, 616.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3673) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (222, 312, 359) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 633) [M::mem_pestat] mean and std.dev: (291.10, 107.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 770) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 684220 sequences (100000110 bp) in 1.430 CPU sec, 1.437 real sec... [M::mem_process_seqs] Processed 686062 reads in 140.422 CPU sec, 4.454 real sec [M::mem_process_seqs] Processed 685102 reads in 88.263 CPU sec, 2.790 real sec sorting block 46, #reads = 1077368 mem = 536878075 peak = 1063997440 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (20, 283639, 8, 23) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (139, 496, 570) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1432) [M::mem_pestat] mean and std.dev: (399.15, 217.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1863) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (202, 325, 452) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 952) [M::mem_pestat] mean and std.dev: (339.20, 164.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1202) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (228, 313, 729) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1731) [M::mem_pestat] mean and std.dev: (464.83, 281.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2232) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 683714 sequences (100000018 bp) in 2.522 CPU sec, 2.640 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (24, 283758, 1, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (261, 496, 866) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2076) [M::mem_pestat] mean and std.dev: (533.79, 317.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2681) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (198, 317, 443) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 933) [M::mem_pestat] mean and std.dev: (332.49, 161.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1178) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (207, 242, 262) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (97, 372) [M::mem_pestat] mean and std.dev: (226.00, 52.30) [M::mem_pestat] low and high boundaries for proper pairs: (17, 435) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 683650 sequences (100000151 bp) in 1.475 CPU sec, 1.479 real sec... [M::mem_process_seqs] Processed 683668 reads in 142.064 CPU sec, 4.505 real sec sorting block 47, #reads = 1078438 mem = 536878616 peak = 1063997440 [M::mem_process_seqs] Processed 684220 reads in 90.483 CPU sec, 2.858 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (30, 283219, 8, 23) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (222, 500, 1069) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2763) [M::mem_pestat] mean and std.dev: (587.97, 396.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3610) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (200, 321, 449) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 947) [M::mem_pestat] mean and std.dev: (336.71, 163.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1196) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (157, 386, 624) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1558) [M::mem_pestat] mean and std.dev: (387.76, 229.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2025) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 48, #reads = 1077011 mem = 536880412 peak = 1063997440 [M::process] read 683576 sequences (100000251 bp) in 2.539 CPU sec, 2.649 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 283540, 4, 28) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (172, 266, 728) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1840) [M::mem_pestat] mean and std.dev: (493.33, 435.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2396) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (201, 324, 456) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 966) [M::mem_pestat] mean and std.dev: (340.41, 166.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1221) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (206, 309, 390) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 758) [M::mem_pestat] mean and std.dev: (294.56, 124.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 942) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 684846 sequences (100000255 bp) in 1.530 CPU sec, 1.531 real sec... [M::mem_process_seqs] Processed 683714 reads in 143.112 CPU sec, 4.536 real sec [M::mem_process_seqs] Processed 683650 reads in 91.134 CPU sec, 2.876 real sec sorting block 49, #reads = 1076789 mem = 536882003 peak = 1063997440 [M::process] read 688992 sequences (100000232 bp) in 2.747 CPU sec, 2.828 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (31, 284128, 8, 19) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (204, 260, 351) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 645) [M::mem_pestat] mean and std.dev: (274.97, 120.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 792) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (195, 311, 444) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 942) [M::mem_pestat] mean and std.dev: (332.73, 166.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1191) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (180, 211, 320) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 600) [M::mem_pestat] mean and std.dev: (211.88, 72.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 740) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 687468 sequences (100000231 bp) in 1.520 CPU sec, 1.519 real sec... [M::mem_process_seqs] Processed 684846 reads in 85.264 CPU sec, 2.677 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 283688, 6, 26) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (249, 331, 627) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1383) [M::mem_pestat] mean and std.dev: (427.10, 234.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1761) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (200, 323, 456) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 968) [M::mem_pestat] mean and std.dev: (340.41, 167.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1224) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (248, 351, 423) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 773) [M::mem_pestat] mean and std.dev: (372.12, 163.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1027) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 285620, 5, 23) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (207, 253, 1373) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3705) [M::mem_pestat] mean and std.dev: (442.89, 488.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4871) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (184, 297, 423) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 901) [M::mem_pestat] mean and std.dev: (314.24, 154.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1140) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (299, 324, 325) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (247, 377) [M::mem_pestat] mean and std.dev: (318.25, 11.12) [M::mem_pestat] low and high boundaries for proper pairs: (221, 403) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 687570 sequences (100000155 bp) in 1.989 CPU sec, 1.991 real sec... [M::mem_process_seqs] Processed 683576 reads in 235.062 CPU sec, 7.437 real sec sorting block 50, #reads = 1072042 mem = 536881288 peak = 1063997440 [M::mem_process_seqs] Processed 688992 reads in 114.122 CPU sec, 3.621 real sec sorting block 51, #reads = 1073969 mem = 536879731 peak = 1091641344 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 285123, 10, 21) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (233, 287, 1027) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2615) [M::mem_pestat] mean and std.dev: (479.29, 333.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3409) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (188, 303, 427) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 905) [M::mem_pestat] mean and std.dev: (318.17, 154.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1144) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (69, 328, 354) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 924) [M::mem_pestat] mean and std.dev: (240.60, 130.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1209) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (289, 362, 399) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (69, 619) [M::mem_pestat] mean and std.dev: (307.95, 111.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 754) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 688036 sequences (100000109 bp) in 2.837 CPU sec, 2.976 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (23, 284877, 5, 22) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (251, 265, 383) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 647) [M::mem_pestat] mean and std.dev: (294.68, 78.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 779) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (188, 303, 431) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 917) [M::mem_pestat] mean and std.dev: (320.73, 157.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1160) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (197, 334, 460) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 986) [M::mem_pestat] mean and std.dev: (317.30, 142.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1249) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 685314 sequences (100000287 bp) in 1.500 CPU sec, 1.504 real sec... [M::mem_process_seqs] Processed 687468 reads in 151.507 CPU sec, 4.799 real sec [M::mem_process_seqs] Processed 687570 reads in 94.858 CPU sec, 2.995 real sec sorting block 52, #reads = 1072321 mem = 536880717 peak = 1091641344 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (14, 285104, 2, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (125, 225, 258) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 524) [M::mem_pestat] mean and std.dev: (177.00, 56.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 657) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (185, 293, 416) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 878) [M::mem_pestat] mean and std.dev: (311.33, 151.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1109) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (181, 200, 329) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 625) [M::mem_pestat] mean and std.dev: (207.62, 76.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 773) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 685680 sequences (100000216 bp) in 2.408 CPU sec, 2.548 real sec... [M::process] read 684490 sequences (100000137 bp) in 1.480 CPU sec, 1.484 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (14, 284013, 6, 17) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (139, 559, 969) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2629) [M::mem_pestat] mean and std.dev: (740.00, 778.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3853) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (195, 312, 434) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 912) [M::mem_pestat] mean and std.dev: (325.90, 156.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1151) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (152, 177, 320) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 656) [M::mem_pestat] mean and std.dev: (203.29, 70.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 824) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 688036 reads in 147.667 CPU sec, 4.683 real sec [M::mem_process_seqs] Processed 685314 reads in 92.269 CPU sec, 2.920 real sec sorting block 53, #reads = 1075504 mem = 536877680 peak = 1091641344 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (25, 283271, 5, 19) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (206, 281, 513) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1127) [M::mem_pestat] mean and std.dev: (356.16, 188.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1434) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (193, 309, 432) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 910) [M::mem_pestat] mean and std.dev: (323.91, 156.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1149) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (229, 274, 749) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1789) [M::mem_pestat] mean and std.dev: (511.89, 472.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2404) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 684236 sequences (100000004 bp) in 2.508 CPU sec, 2.666 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 283687, 4, 26) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (178, 180, 429) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 931) [M::mem_pestat] mean and std.dev: (240.68, 132.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1182) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (197, 313, 437) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 917) [M::mem_pestat] mean and std.dev: (328.41, 158.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1157) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (195, 323, 496) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1098) [M::mem_pestat] mean and std.dev: (316.83, 113.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1399) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 683708 sequences (100000209 bp) in 1.490 CPU sec, 1.488 real sec... [M::mem_process_seqs] Processed 685680 reads in 146.360 CPU sec, 4.644 real sec sorting block 54, #reads = 1075522 mem = 536882187 peak = 1091641344 [M::mem_process_seqs] Processed 684490 reads in 91.437 CPU sec, 2.893 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (19, 283197, 5, 23) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (158, 198, 260) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 464) [M::mem_pestat] mean and std.dev: (197.17, 61.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 566) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (198, 317, 443) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 933) [M::mem_pestat] mean and std.dev: (332.54, 161.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1178) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (134, 294, 327) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 713) [M::mem_pestat] mean and std.dev: (224.40, 101.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 906) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 55, #reads = 1076103 mem = 536878979 peak = 1091641344 [M::process] read 609122 sequences (89080147 bp) in 2.336 CPU sec, 2.475 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (24, 283117, 1, 27) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (237, 376, 581) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1269) [M::mem_pestat] mean and std.dev: (350.05, 150.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1613) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (199, 318, 447) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 943) [M::mem_pestat] mean and std.dev: (335.13, 163.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1191) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (325, 459, 730) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1540) [M::mem_pestat] mean and std.dev: (477.17, 272.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1945) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 684236 reads in 143.777 CPU sec, 4.616 real sec [M::mem_process_seqs] Processed 683708 reads in 89.564 CPU sec, 2.879 real sec sorting block 56, #reads = 1077063 mem = 536880624 peak = 1091641344 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (13, 252782, 3, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (144, 150, 321) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 675) [M::mem_pestat] mean and std.dev: (225.54, 143.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 852) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (199, 317, 450) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 952) [M::mem_pestat] mean and std.dev: (336.80, 166.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1203) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (194, 394, 535) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1217) [M::mem_pestat] mean and std.dev: (352.94, 159.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1558) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 609122 reads in 69.367 CPU sec, 2.290 real sec os version: Linux 6.12.88 cpu vendor: GenuineIntel signature: 000a06d1 features: 1f8bfbff fffab20b extended: f1bf27eb 1b407f7e amd bits: 2c100800 00000121 brand: Intel(R) Xeon(R) 6975P-C threads: 31 algo: bwa-mem license: sentieon:klib=31 reads: 62106298 overall: 69883166720 mem 8575.283 user 297.127 sys 1072.946 real [main] Version: 0.7.17-r1188 [main] CMD: /opt/conda/share/sentieon-202308.03-3/libexec/bwa mem -K 100000000 -Y -R @RG\tID:A23MHWWLT4.1136_3U6-T1-TDNA-1_A23MHWWLT4_1.L008\tPU:L008\tSM:1136_3U6-T1-TDNA-1_A23MHWWLT4_1\tLB:1136_3U6-T1-TDNA-1_A23MHWWLT4_1\tDS:s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta\tPL:ILLUMINA -t 31 ./BWAIndex/Homo_sapiens_assembly38.fasta.64 0003.1136_3U6-T1-TDNA-1_A23MHWWLT4_1_R1.fastq.gz 0003.1136_3U6-T1-TDNA-1_A23MHWWLT4_1_R2.fastq.gz [main] Real time: 1072.980 sec; CPU: 8872.413 sec sorting block 57, #reads = 991182 mem = 494158265 peak = 1091641344 uniq header count 1 merging 58 blocks sw version: sentieon-genomics-202308.03 os version: Linux 6.12.88 cpu vendor: GenuineIntel signature: 000a06d1 features: 1f8bfbff fffab20b extended: f1bf27eb 1b407f7e amd bits: 2c100800 00000121 brand: Intel(R) Xeon(R) 6975P-C threads: 31 max 192 algo: util-sort license: sentieon:util=1 output file size: 3649666861 output reads: 62437720 bam_mem_sort: 58 calls 28.256 user 0.284 sys 28.607 real bam_write: 58 calls 11.842 user 0.475 sys 12.277 real execute: 1 calls 12.776 user 1.004 sys 1094.250 real merge_files: 1 calls 12.760 user 0.982 sys 20.065 real parse_chunk: 927 calls 40.384 user 9.227 sys 50.170 real read_chunk: 2502 calls 17.496 user 18.982 sys 234.111 real sort_block: 1 calls 13.499 user 18.546 sys 227.366 real write_chunk: 1573 calls 12.395 user 0.754 sys 19.257 real overall: 2684489728 mem 781.299 user 35.994 sys 1094.269 real ls: cannot access '*.cram': No such file or directory