[W::hts_idx_load3] The index file is older than the data file: 1136_4GR-T1-TDNA-1_A23MHWWLT4_1.md.bam.bai ls: cannot access '*.per-base.d4': No such file or directory ls: cannot access '*.quantized.bed.gz': No such file or directory ls: cannot access '*.quantized.bed.gz.csi': No such file or directory ls: cannot access '*.thresholds.bed.gz': No such file or directory ls: cannot access '*.thresholds.bed.gz.csi': No such file or directory