cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i 659_bR4-T1-TDNA-1_A23MHWWLT4_1.md.bam --algo AlignmentStat 659_bR4-T1-TDNA-1_A23MHWWLT4_1.sentieon.alignment_summary_metrics --algo InsertSizeMetricAlgo 659_bR4-T1-TDNA-1_A23MHWWLT4_1.sentieon.insert_size_metrics --algo QualDistribution 659_bR4-T1-TDNA-1_A23MHWWLT4_1.sentieon.quality_distribution_metrics --algo BaseDistributionByCycle 659_bR4-T1-TDNA-1_A23MHWWLT4_1.sentieon.base_distribution_by_cycle_metrics --algo MeanQualityByCycle 659_bR4-T1-TDNA-1_A23MHWWLT4_1.sentieon.quality_by_cycle_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:15000001, elapsed 13.5s, est remaining 256.0s, peak mem 4823MB, user 316.7s, sys 3.7s, output queue size 146
progress 10% @chr2:94000001, elapsed 27.1s, est remaining 244.0s, peak mem 8143MB, user 709.5s, sys 6.2s, output queue size 117
progress 15% @chr2:240000001, elapsed 40.6s, est remaining 229.8s, peak mem 10530MB, user 1105.5s, sys 8.7s, output queue size 203
progress 20% @chr3:69000001, elapsed 50.9s, est remaining 203.5s, peak mem 10530MB, user 1462.3s, sys 11.5s, output queue size 218
progress 25% @chr4:137000001, elapsed 60.3s, est remaining 180.9s, peak mem 10530MB, user 1760.6s, sys 12.2s, output queue size 302
progress 30% @chr5:97000001, elapsed 68.9s, est remaining 160.7s, peak mem 10779MB, user 2009.0s, sys 13.2s, output queue size 464
progress 35% @chr6:91000001, elapsed 79.5s, est remaining 147.7s, peak mem 10957MB, user 2321.6s, sys 14.2s, output queue size 625
progress 40% @chr7:47000001, elapsed 91.9s, est remaining 137.9s, peak mem 11161MB, user 2671.5s, sys 15.3s, output queue size 786
progress 45% @chr8:82000001, elapsed 108.8s, est remaining 132.9s, peak mem 11347MB, user 3091.2s, sys 16.6s, output queue size 948
progress 50% @chr9:62000001, elapsed 122.1s, est remaining 122.1s, peak mem 11722MB, user 3540.0s, sys 17.9s, output queue size 366
progress 55% @chr10:103000001, elapsed 136.9s, est remaining 112.0s, peak mem 11812MB, user 3988.5s, sys 19.2s, output queue size 527
progress 60% @chr11:76000001, elapsed 150.3s, est remaining 100.2s, peak mem 11812MB, user 4390.2s, sys 20.1s, output queue size 689
progress 65% @chr13:36000001, elapsed 167.7s, est remaining 90.3s, peak mem 11841MB, user 4920.9s, sys 21.2s, output queue size 672
progress 70% @chr14:76000001, elapsed 176.9s, est remaining 75.8s, peak mem 11966MB, user 5208.3s, sys 21.8s, output queue size 833
progress 75% @chr16:42000001, elapsed 192.6s, est remaining 64.2s, peak mem 12168MB, user 5624.7s, sys 22.9s, output queue size 995
progress 80% @chr18:13000001, elapsed 215.4s, est remaining 53.9s, peak mem 12223MB, user 6223.1s, sys 24.5s, output queue size 1157
progress 85% @chr19:10000001, elapsed 237.1s, est remaining 41.8s, peak mem 12345MB, user 7068.6s, sys 26.3s, output queue size 785
progress 90% @chrX:24000001, elapsed 250.2s, est remaining 27.8s, peak mem 12640MB, user 7431.1s, sys 27.4s, output queue size 947
progress 95% @chrY:55000001, elapsed 258.2s, est remaining 13.6s, peak mem 12640MB, user 7673.8s, sys 28.0s, output queue size 1109
progress 100% @chr22:23000001, elapsed 286.2s, est remaining 0.0s, peak mem 12872MB, user 8164.5s, sys 29.2s, output queue size 3635
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 192
algo: AlignmentStat InsertSizeMetricAlgo QualDistribution BaseDistributionByCycle MeanQualityByCycle
license: sentieon:Metrics=31
input file size: 83203675103
reads: 1632923217
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1347.242 user 25.269 sys 1370.490 real
done: 1 calls 0.049 user 0.009 sys 0.059 real
exec_no_coor: 1 calls 0.012 user 0.006 sys 0.024 real
execute: 1 calls 0.004 user 0.003 sys 286.386 real
idle: 749 calls 0.155 user 0.000 sys 714.813 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 13497606144 mem 8166.708 user 29.717 sys 287.849 real