File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f1/b6166f3b5d493d32eba009903f25e0/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-cdk19v9a because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:57:56,683 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:57:57,560 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:57:57,732 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:57:58,721 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:57:58,798 - cnv_pipe.batch.run_model - INFO - Processing cluster 1322 with 185 probes
2026-06-05 20:57:59,280 - cnv_pipe.batch.run_model.cluster1322 - INFO - Child process started for cluster 1322 with 185 probes
2026-06-05 20:58:57,584 - cnv_pipe.batch.run_model.cluster1322 - INFO - Child process finished cluster 1322. Wrote cluster_1322_samples.csv and cluster_1322_params.csv
2026-06-05 20:58:57,585 - cnv_pipe.batch.run_model - INFO - Cluster 1322 finished in 58.79 seconds. Status: SUCCESS