File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4f/e57f4f087624288798750cec6477c9/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-uisxzxk1 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:57:57,375 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:57:58,251 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:57:58,429 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:57:59,418 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:57:59,578 - cnv_pipe.batch.run_model - INFO - Processing cluster 755 with 190 probes
2026-06-05 20:57:59,952 - cnv_pipe.batch.run_model.cluster755 - INFO - Child process started for cluster 755 with 190 probes
2026-06-05 20:58:57,900 - cnv_pipe.batch.run_model.cluster755 - INFO - Child process finished cluster 755. Wrote cluster_755_samples.csv and cluster_755_params.csv
2026-06-05 20:58:57,901 - cnv_pipe.batch.run_model - INFO - Cluster 755 finished in 58.32 seconds. Status: SUCCESS