mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-itywvklb because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:55:26,983 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:55:27,843 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:55:28,009 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:55:29,004 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:55:29,164 - cnv_pipe.batch.run_model - INFO - Processing cluster 607 with 183 probes
2026-06-05 20:55:29,563 - cnv_pipe.batch.run_model.cluster607 - INFO - Child process started for cluster 607 with 183 probes
2026-06-05 20:56:24,708 - cnv_pipe.batch.run_model.cluster607 - INFO - Child process finished cluster 607. Wrote cluster_607_samples.csv and cluster_607_params.csv
2026-06-05 20:56:24,710 - cnv_pipe.batch.run_model - INFO - Cluster 607 finished in 55.55 seconds. Status: SUCCESS