mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-6w6ez1r3 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:55:11,867 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:55:12,702 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:55:12,867 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:55:13,937 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:55:14,002 - cnv_pipe.batch.run_model - INFO - Processing cluster 518 with 182 probes
2026-06-05 20:55:14,400 - cnv_pipe.batch.run_model.cluster518 - INFO - Child process started for cluster 518 with 182 probes
2026-06-05 20:56:10,301 - cnv_pipe.batch.run_model.cluster518 - INFO - Child process finished cluster 518. Wrote cluster_518_samples.csv and cluster_518_params.csv
2026-06-05 20:56:10,302 - cnv_pipe.batch.run_model - INFO - Cluster 518 finished in 56.30 seconds. Status: SUCCESS