mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-r4byz7ui because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:55:05,499 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:55:06,342 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:55:06,514 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:55:07,538 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:55:07,721 - cnv_pipe.batch.run_model - INFO - Processing cluster 473 with 177 probes
2026-06-05 20:55:08,107 - cnv_pipe.batch.run_model.cluster473 - INFO - Child process started for cluster 473 with 177 probes
2026-06-05 20:56:01,999 - cnv_pipe.batch.run_model.cluster473 - INFO - Child process finished cluster 473. Wrote cluster_473_samples.csv and cluster_473_params.csv
2026-06-05 20:56:02,000 - cnv_pipe.batch.run_model - INFO - Cluster 473 finished in 54.28 seconds. Status: SUCCESS