File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6a/9a274413a913ac66565efdfb354ce4/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-hfzdwonf because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:56:01,904 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:56:02,696 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:56:02,862 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:56:03,779 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:56:03,853 - cnv_pipe.batch.run_model - INFO - Processing cluster 816 with 175 probes
2026-06-05 20:56:04,309 - cnv_pipe.batch.run_model.cluster816 - INFO - Child process started for cluster 816 with 175 probes
2026-06-05 20:56:56,420 - cnv_pipe.batch.run_model.cluster816 - INFO - Child process finished cluster 816. Wrote cluster_816_samples.csv and cluster_816_params.csv
2026-06-05 20:56:56,421 - cnv_pipe.batch.run_model - INFO - Cluster 816 finished in 52.57 seconds. Status: SUCCESS