File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/eb/1f5f085503d835421cc99efac6cff6/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-gu0s5jqs because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:56:58,035 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:56:58,859 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:56:59,031 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:56:59,997 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:57:00,164 - cnv_pipe.batch.run_model - INFO - Processing cluster 1145 with 167 probes
2026-06-05 20:57:00,566 - cnv_pipe.batch.run_model.cluster1145 - INFO - Child process started for cluster 1145 with 167 probes
2026-06-05 20:57:51,511 - cnv_pipe.batch.run_model.cluster1145 - INFO - Child process finished cluster 1145. Wrote cluster_1145_samples.csv and cluster_1145_params.csv
2026-06-05 20:57:51,512 - cnv_pipe.batch.run_model - INFO - Cluster 1145 finished in 51.35 seconds. Status: SUCCESS