[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXcFxNyM/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXcFxNyM/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXcFxNyM/chr6_138229684-138229952.bed.gz.tbi
[2026-06-05T20:52:00.554835Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-05T20:52:00.556055Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-05T20:52:00.556075Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-05T20:52:00.556081Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-05T20:52:00.556085Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXcFxNyM'
[2026-06-05T20:52:00.556089Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-05T20:52:00.556094Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-05T20:52:00.556098Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-05T20:52:00.556102Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] [RunParameters] memMb: 1547931
[2026-06-05T20:52:00.556106Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-05T20:52:00.556109Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-05T20:52:00.556113Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-05T20:52:00.556116Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-05T20:52:00.556120Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-05T20:52:00.556759Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-05T20:52:00.556899Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-05T20:52:00.563657Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-05T20:52:00.564388Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-05T20:52:00.564890Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-05T20:52:00.565078Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-05T20:52:00.565244Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.565970Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.566443Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.566563Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.566989Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.567215Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.567328Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.567614Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.567851Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.568785Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.570039Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.570916Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-05T20:52:00.571009Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.571333Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.571616Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.571718Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.571855Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.571938Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.572082Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.572163Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.572401Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.572516Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.572988Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.573231Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.573562Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.573805Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.573944Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.574009Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.574120Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.574187Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.574339Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.574422Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.574572Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.574635Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.574775Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.574888Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.575163Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.575566Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.575699Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.575760Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.575874Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.575936Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.576064Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.576127Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.576232Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.576296Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.576409Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.576542Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.576911Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.577379Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.577502Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.577569Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.577678Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.577738Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.577846Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.577909Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.578016Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.578083Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.578189Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.578250Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.578436Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.578963Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.579086Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.579151Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.579258Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.579327Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.579432Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.579494Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.579604Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.579670Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.579778Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.579839Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.579953Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.580125Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.581892Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.582692Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.583412Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.583489Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.583601Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.583667Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.583777Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.583837Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.583948Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.584008Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.584115Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.584181Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.584292Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.584369Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.584504Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.584600Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.585672Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.586101Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.586276Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.586351Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.586476Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.586544Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.586669Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.586733Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.586847Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.586912Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.587482Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.588248Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.588378Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.588449Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.588575Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.588645Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.588756Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.588819Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.588931Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.588994Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.592314Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.592427Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.592687Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.592754Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.600384Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.607101Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.607975Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.608461Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.608649Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.608883Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.609533Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.609765Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.610273Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.610591Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.611040Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.611453Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.612109Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.614948Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.616118Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.617077Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.617494Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-06-05T20:52:00.618465Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-05T20:52:00.620481Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.621115Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-05T20:52:00.623005Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0002] Task initiated on local node
[2026-06-05T20:52:00.623667Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0009] Task initiated on local node
[2026-06-05T20:52:00.626691Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-06-05T20:52:00.632332Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0010] Task initiated on local node
[2026-06-05T20:52:00.635016Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-06-05T20:52:00.635586Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-06-05T20:52:00.638356Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0010] Task initiated on local node
[2026-06-05T20:52:00.751370Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.751458Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.751488Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.751523Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.753512Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.753897Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.754668Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.756595Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.758984Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0005] Task initiated on local node
[2026-06-05T20:52:00.760647Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0013] Task initiated on local node
[2026-06-05T20:52:00.762441Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0007] Task initiated on local node
[2026-06-05T20:52:00.763595Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0007] Task initiated on local node
[2026-06-05T20:52:01.672951Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.674045Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.676963Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0004] Task initiated on local node
[2026-06-05T20:52:01.788273Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.789510Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.792642Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0000] Task initiated on local node
[2026-06-05T20:52:01.854745Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.855942Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.859294Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0002] Task initiated on local node
[2026-06-05T20:52:02.020569Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.021890Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.025440Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0008] Task initiated on local node
[2026-06-05T20:52:02.186553Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.187760Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.191155Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-06-05T20:52:02.252423Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.253568Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.256746Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0011] Task initiated on local node
[2026-06-05T20:52:02.318010Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.319237Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.322367Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0012] Task initiated on local node
[2026-06-05T20:52:02.433735Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.434932Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.437757Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0010] Task initiated on local node
[2026-06-05T20:52:02.467086Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.467188Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.468278Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.468810Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.471514Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0002] Task initiated on local node
[2026-06-05T20:52:02.472479Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0002] Task initiated on local node
[2026-06-05T20:52:02.502176Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.503348Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.505977Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0001] Task initiated on local node
[2026-06-05T20:52:02.617640Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.617747Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.618843Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.619320Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.622701Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-06-05T20:52:02.624018Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-06-05T20:52:02.684273Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.684373Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.685445Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.685960Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.688982Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0010] Task initiated on local node
[2026-06-05T20:52:02.690856Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0004] Task initiated on local node
[2026-06-05T20:52:02.718001Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.719035Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.721322Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0013] Task initiated on local node
[2026-06-05T20:52:02.751066Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.752168Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.754822Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0011] Task initiated on local node
[2026-06-05T20:52:02.784177Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.785243Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.788123Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0009] Task initiated on local node
[2026-06-05T20:52:02.949577Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.950647Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.953578Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0004] Task initiated on local node
[2026-06-05T20:52:02.982466Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.983433Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.986242Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0006] Task initiated on local node
[2026-06-05T20:52:02.999373Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.000279Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.003045Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0012] Task initiated on local node
[2026-06-05T20:52:03.415168Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.416101Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.418965Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-06-05T20:52:03.480263Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.480341Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.481230Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.481611Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.484577Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0008] Task initiated on local node
[2026-06-05T20:52:03.485701Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-06-05T20:52:03.515199Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.515289Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.516186Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.516649Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.520087Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_005_chr6_0000] Task initiated on local node
[2026-06-05T20:52:03.520789Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.521415Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0011] Task initiated on local node
[2026-06-05T20:52:03.522211Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.524656Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0009] Task initiated on local node
[2026-06-05T20:52:03.554144Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.554953Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.557420Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0004] Task initiated on local node
[2026-06-05T20:52:03.563080Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.563865Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.566311Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0000] Task initiated on local node
[2026-06-05T20:52:03.627950Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.628807Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.631140Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0007] Task initiated on local node
[2026-06-05T20:52:03.661790Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.661852Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.662635Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.663158Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.665885Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0002] Task initiated on local node
[2026-06-05T20:52:03.666886Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-06-05T20:52:03.696602Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.696663Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.697435Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.697894Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.700452Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0001] Task initiated on local node
[2026-06-05T20:52:03.701357Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0001] Task initiated on local node
[2026-06-05T20:52:03.762135Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.762959Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.765191Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0012] Task initiated on local node
[2026-06-05T20:52:03.794962Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.795764Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.798154Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-06-05T20:52:03.827739Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.828519Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.830881Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0005] Task initiated on local node
[2026-06-05T20:52:03.860448Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.861213Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.864261Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0009] Task initiated on local node
[2026-06-05T20:52:03.893162Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.894005Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.896831Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0000] Task initiated on local node
[2026-06-05T20:52:03.926085Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.926913Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.929355Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0006] Task initiated on local node
[2026-06-05T20:52:04.141162Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.141231Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.142058Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.142570Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.145324Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0006] Task initiated on local node
[2026-06-05T20:52:04.146131Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0007] Task initiated on local node
[2026-06-05T20:52:04.176123Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.176208Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.177012Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.177435Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.180825Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0002] Task initiated on local node
[2026-06-05T20:52:04.182003Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0008] Task initiated on local node
[2026-06-05T20:52:04.210827Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.211664Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.214362Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0001] Task initiated on local node
[2026-06-05T20:52:04.244628Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.245340Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.247686Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-06-05T20:52:04.277283Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.277990Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.280807Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0003] Task initiated on local node
[2026-06-05T20:52:04.392262Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.393044Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.395853Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0012] Task initiated on local node
[2026-06-05T20:52:04.425023Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.425722Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.428631Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-06-05T20:52:04.490084Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.490777Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.492690Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-06-05T20:52:04.522688Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.523378Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.525593Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-06-05T20:52:04.587353Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.588036Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.590176Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0006] Task initiated on local node
[2026-06-05T20:52:04.652036Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.652732Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.654945Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0008] Task initiated on local node
[2026-06-05T20:52:04.817029Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.817104Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.817869Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.819463Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.820452Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0001] Task initiated on local node
[2026-06-05T20:52:04.822505Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0003] Task initiated on local node
[2026-06-05T20:52:04.851736Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.851798Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.852511Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.853042Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.855737Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0004] Task initiated on local node
[2026-06-05T20:52:04.856548Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-06-05T20:52:04.886485Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.886546Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.887183Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.888695Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.889413Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0004] Task initiated on local node
[2026-06-05T20:52:04.892130Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0009] Task initiated on local node
[2026-06-05T20:52:04.921443Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.922241Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.924922Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-06-05T20:52:04.955233Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.955928Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.958475Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-06-05T20:52:04.989104Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.989816Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.993100Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-06-05T20:52:05.054492Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:05.055270Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:52:05.057696Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0001] Task initiated on local node
[2026-06-05T20:52:05.087272Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:05.088017Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:52:05.090437Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-06-05T20:52:05.119980Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:05.120670Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-06-05T20:52:05.123275Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0011] Task initiated on local node
[2026-06-05T20:52:05.152649Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:05.153324Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:52:05.155751Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-06-05T20:52:05.217343Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:05.217972Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:52:05.220653Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-06-05T20:52:05.332384Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:05.333091Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-06-05T20:52:05.335981Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0010] Task initiated on local node
[2026-06-05T20:52:05.447241Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:05.447925Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-05T20:52:05.450641Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-06-05T20:52:05.562081Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:05.562730Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:52:05.565129Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0000] Task initiated on local node
[2026-06-05T20:52:05.594637Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:05.595306Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:52:05.597971Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0000] Task initiated on local node
[2026-06-05T20:52:05.709672Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:05.709738Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:05.710384Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:52:05.710822Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:52:05.713891Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0008] Task initiated on local node
[2026-06-05T20:52:05.714903Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0007] Task initiated on local node
[2026-06-05T20:52:05.716276Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:05.716924Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:52:05.719638Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0003] Task initiated on local node
[2026-06-05T20:52:05.748812Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:05.749399Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:52:05.752082Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-06-05T20:52:05.813456Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:05.814147Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:52:05.816793Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0005] Task initiated on local node
[2026-06-05T20:52:06.279306Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.279993Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.282750Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0005] Task initiated on local node
[2026-06-05T20:52:06.344210Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.344277Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.344303Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.344903Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.345466Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.347256Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.348219Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-06-05T20:52:06.350603Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0010] Task initiated on local node
[2026-06-05T20:52:06.355497Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.356175Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.358873Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0011] Task initiated on local node
[2026-06-05T20:52:06.378854Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-06-05T20:52:06.388234Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.388304Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.388333Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.388872Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.390596Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.391181Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.391643Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-06-05T20:52:06.394083Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-06-05T20:52:06.395046Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0009] Task initiated on local node
[2026-06-05T20:52:06.423706Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.423769Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.424269Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.425026Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.428063Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-06-05T20:52:06.428823Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-06-05T20:52:06.458147Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.458215Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.458732Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.459250Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.462197Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-06-05T20:52:06.463371Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0008] Task initiated on local node
[2026-06-05T20:52:06.492528Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.492591Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.492620Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.493143Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.493458Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.493644Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.496327Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0005] Task initiated on local node
[2026-06-05T20:52:06.498058Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0006] Task initiated on local node
[2026-06-05T20:52:06.498875Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-06-05T20:52:06.526010Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.526068Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.526093Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.526592Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.527014Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.527792Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.530668Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-06-05T20:52:06.532221Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0003] Task initiated on local node
[2026-06-05T20:52:06.533121Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0003] Task initiated on local node
[2026-06-05T20:52:06.561427Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.561483Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.561505Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.562052Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.562558Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.565435Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0006] Task initiated on local node
[2026-06-05T20:52:06.566099Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-06-05T20:52:06.580128Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.580627Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.583398Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0007] Task initiated on local node
[2026-06-05T20:52:06.596569Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.596646Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.612439Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.644250Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.644753Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.647216Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0005] Task initiated on local node
[2026-06-05T20:52:06.676644Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.692468Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.692940Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.695150Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0000] Task initiated on local node
[2026-06-05T20:52:06.725540Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.839613Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.840084Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.843061Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0003] Task initiated on local node
[2026-06-05T20:52:06.872008Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:07.286616Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:07.287079Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-06-05T20:52:07.289566Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0011] Task initiated on local node
[2026-06-05T20:52:07.319046Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:07.319334Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:07.319437Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-05T20:52:07.319924Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-05T20:52:07.320537Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-05T20:52:07.323749Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-05T20:52:07.326165Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-05T20:52:07.351515Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-05T20:52:07.354141Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:07.354192Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:07.354215Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:07.354406Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-05T20:52:07.356191Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-05T20:52:07.356775Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-05T20:52:07.358912Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-05T20:52:07.388359Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:07.388407Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:07.388570Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-05T20:52:07.390801Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-05T20:52:07.420587Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:11.191653Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-05T20:52:19.444572Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-05T20:52:19.444572Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] 
[2026-06-05T20:52:19.444572Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-05T20:52:19.444677Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] 
[2026-06-05T20:52:19.444685Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-05T20:52:19.444694Z] [nf-e58f05d5913ed2c2ee9a128d55cdd177-14d24-hbqs8] [588_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec