[2026-06-05T20:51:55.113389Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-05T20:51:55.114558Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-05T20:51:55.114577Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-05T20:51:55.114583Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-05T20:51:55.114588Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXF8Mo3V'
[2026-06-05T20:51:55.114592Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-05T20:51:55.114597Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-05T20:51:55.114601Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-05T20:51:55.114605Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] [RunParameters] memMb: 1547931
[2026-06-05T20:51:55.114609Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-05T20:51:55.114613Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-05T20:51:55.114616Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-05T20:51:55.114620Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-05T20:51:55.114624Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-05T20:51:55.115092Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-05T20:51:55.115219Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-05T20:51:55.121857Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-05T20:51:55.122752Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-05T20:51:55.122905Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-05T20:51:55.123224Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-05T20:51:55.123389Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.123842Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.123936Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.124010Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.124128Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.124194Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.124369Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.124616Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.125029Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.125257Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.125365Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.125490Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.125561Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.126280Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.126736Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.128738Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.129480Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-05T20:51:55.129553Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.129795Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.129867Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.130065Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.130141Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.130259Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.130329Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.130441Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.130504Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.130620Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.130681Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.130814Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.131094Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.131506Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.131577Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.131707Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.131769Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.131881Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.131941Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.132056Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.132120Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.132228Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.132288Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.132403Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.132583Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.133130Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.133357Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.133800Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.133864Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.133974Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.134037Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.134228Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.134298Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.134414Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.134478Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.134586Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.134648Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.134784Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.134943Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.135358Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.136373Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.136575Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.136661Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.136783Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.136882Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.137006Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.137074Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.137677Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.138200Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.138356Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.138435Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.139030Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.139133Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.139590Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.140276Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.140541Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.140627Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.142356Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.142529Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.143250Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.143325Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.143445Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.143510Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.143629Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.143691Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.143805Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.143866Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.143979Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.144062Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.144178Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.144270Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.144586Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.145167Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.145281Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.145347Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.145456Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.145521Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.145632Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.145695Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.145808Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.145870Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.160782Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.161498Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.161738Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.161857Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.162847Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.162978Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.163051Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.163499Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.163699Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.163886Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.164183Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.164308Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.164387Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-05T20:51:55.167241Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.168507Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0007] Task initiated on local node
[2026-06-05T20:51:55.169723Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0002] Task initiated on local node
[2026-06-05T20:51:55.170462Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.173233Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.173476Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0012] Task initiated on local node
[2026-06-05T20:51:55.174250Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.177313Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.177521Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0003] Task initiated on local node
[2026-06-05T20:51:55.178820Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.181749Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0014] Task initiated on local node
[2026-06-05T20:51:55.185013Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0000] Task initiated on local node
[2026-06-05T20:51:55.190518Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0006] Task initiated on local node
[2026-06-05T20:51:55.191660Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0001] Task initiated on local node
[2026-06-05T20:51:55.254977Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.255033Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.255054Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.255979Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.256308Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.256710Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.261408Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0000] Task initiated on local node
[2026-06-05T20:51:55.262620Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0003] Task initiated on local node
[2026-06-05T20:51:55.265412Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0011] Task initiated on local node
[2026-06-05T20:51:55.266235Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.267270Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.270670Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0004] Task initiated on local node
[2026-06-05T20:51:56.183524Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.184610Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.188294Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0016] Task initiated on local node
[2026-06-05T20:51:56.216923Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.217887Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.221113Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0000] Task initiated on local node
[2026-06-05T20:51:56.282274Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.283319Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.286585Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0002] Task initiated on local node
[2026-06-05T20:51:56.397710Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.397801Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.398863Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.399453Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.402955Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0007] Task initiated on local node
[2026-06-05T20:51:56.403739Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0004] Task initiated on local node
[2026-06-05T20:51:56.433251Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.434684Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.437686Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0006] Task initiated on local node
[2026-06-05T20:51:56.466663Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.468288Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.471668Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0015] Task initiated on local node
[2026-06-05T20:51:56.500498Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.502104Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.504995Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0014] Task initiated on local node
[2026-06-05T20:51:56.534183Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.535767Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.538883Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0015] Task initiated on local node
[2026-06-05T20:51:56.567849Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.570034Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.570464Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.573026Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.576741Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0003] Task initiated on local node
[2026-06-05T20:51:56.578471Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0015] Task initiated on local node
[2026-06-05T20:51:57.440437Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.442093Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.445365Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0004] Task initiated on local node
[2026-06-05T20:51:57.506508Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.507936Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.511432Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0013] Task initiated on local node
[2026-06-05T20:51:57.572305Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.573756Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.577249Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0001] Task initiated on local node
[2026-06-05T20:51:57.638410Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.639884Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.643005Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0003] Task initiated on local node
[2026-06-05T20:51:57.704148Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.705593Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.708711Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0014] Task initiated on local node
[2026-06-05T20:51:57.769696Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.771428Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.775204Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0000] Task initiated on local node
[2026-06-05T20:51:57.835954Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.836043Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.837491Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.837819Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.842004Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0012] Task initiated on local node
[2026-06-05T20:51:57.843264Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0001] Task initiated on local node
[2026-06-05T20:51:57.854529Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.855499Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.858559Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0000] Task initiated on local node
[2026-06-05T20:51:57.887676Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.888700Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.892820Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0003] Task initiated on local node
[2026-06-05T20:51:57.895121Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.895995Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.899438Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0008] Task initiated on local node
[2026-06-05T20:51:57.928165Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.929132Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.932165Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0011] Task initiated on local node
[2026-06-05T20:51:57.994804Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.995749Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.999237Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0011] Task initiated on local node
[2026-06-05T20:51:58.060364Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.061338Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.064974Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0004] Task initiated on local node
[2026-06-05T20:51:58.125849Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.126808Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.129793Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0002] Task initiated on local node
[2026-06-05T20:51:58.159374Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.160335Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.163474Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0005] Task initiated on local node
[2026-06-05T20:51:58.274788Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.275729Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.279013Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0005] Task initiated on local node
[2026-06-05T20:51:58.491997Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.492969Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.496245Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0015] Task initiated on local node
[2026-06-05T20:51:58.557580Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.558644Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.561732Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0002] Task initiated on local node
[2026-06-05T20:51:58.823598Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.824865Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.828393Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0013] Task initiated on local node
[2026-06-05T20:51:59.290029Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.290188Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.291635Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.291976Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.295490Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0008] Task initiated on local node
[2026-06-05T20:51:59.296464Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0003] Task initiated on local node
[2026-06-05T20:51:59.356681Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.356830Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.358123Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.358675Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.361978Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0006] Task initiated on local node
[2026-06-05T20:51:59.363435Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0003] Task initiated on local node
[2026-06-05T20:51:59.390968Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.392481Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.395400Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0011] Task initiated on local node
[2026-06-05T20:51:59.396251Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.397352Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.399960Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0016] Task initiated on local node
[2026-06-05T20:51:59.429278Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.430586Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.431092Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.432696Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.436076Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0004] Task initiated on local node
[2026-06-05T20:51:59.437164Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0014] Task initiated on local node
[2026-06-05T20:51:59.496940Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.498204Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.501682Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0001] Task initiated on local node
[2026-06-05T20:51:59.562386Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.563685Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.567416Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0003] Task initiated on local node
[2026-06-05T20:51:59.828217Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.829648Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.832868Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0002] Task initiated on local node
[2026-06-05T20:51:59.893928Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.895323Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.898651Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0007] Task initiated on local node
[2026-06-05T20:52:00.009563Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.010700Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.014048Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0000] Task initiated on local node
[2026-06-05T20:52:00.125062Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.126056Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.129396Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0006] Task initiated on local node
[2026-06-05T20:52:00.158320Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.158401Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.159497Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.159834Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.163835Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0001] Task initiated on local node
[2026-06-05T20:52:00.323998Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.325115Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.328421Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0003] Task initiated on local node
[2026-06-05T20:52:00.389337Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.390660Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.394222Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0012] Task initiated on local node
[2026-06-05T20:52:00.605272Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.606260Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.609411Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0000] Task initiated on local node
[2026-06-05T20:52:00.670501Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.671288Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.674269Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0005] Task initiated on local node
[2026-06-05T20:52:00.736026Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.736825Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.739920Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0004] Task initiated on local node
[2026-06-05T20:52:01.152007Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.152751Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.155666Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0002] Task initiated on local node
[2026-06-05T20:52:01.218142Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.218942Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.221909Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0000] Task initiated on local node
[2026-06-05T20:52:01.251350Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.251993Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.255332Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0010] Task initiated on local node
[2026-06-05T20:52:01.316240Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.316989Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.319876Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0000] Task initiated on local node
[2026-06-05T20:52:01.698688Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0005] Task initiated on local node
[2026-06-05T20:52:01.732050Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.732138Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.732164Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.732826Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.734624Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.735227Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.736588Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0001] Task initiated on local node
[2026-06-05T20:52:01.737324Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0002] Task initiated on local node
[2026-06-05T20:52:01.739311Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0012] Task initiated on local node
[2026-06-05T20:52:01.768633Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.768692Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.769265Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.770806Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.772426Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.773061Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0005] Task initiated on local node
[2026-06-05T20:52:01.773191Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0007] Task initiated on local node
[2026-06-05T20:52:01.773580Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.776033Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0008] Task initiated on local node
[2026-06-05T20:52:01.837533Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.837593Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.837621Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.838249Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.838786Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.840481Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.843649Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0008] Task initiated on local node
[2026-06-05T20:52:01.843970Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0010] Task initiated on local node
[2026-06-05T20:52:01.844709Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0010] Task initiated on local node
[2026-06-05T20:52:01.905392Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.905456Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.906032Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.906608Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.909431Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0001] Task initiated on local node
[2026-06-05T20:52:01.910339Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0001] Task initiated on local node
[2026-06-05T20:52:02.070880Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.071527Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.074501Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0002] Task initiated on local node
[2026-06-05T20:52:02.135681Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.136308Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.139242Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0009] Task initiated on local node
[2026-06-05T20:52:02.168281Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.168859Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.171986Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0009] Task initiated on local node
[2026-06-05T20:52:02.233152Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.233790Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.236380Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0009] Task initiated on local node
[2026-06-05T20:52:02.265904Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.266555Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.269326Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0013] Task initiated on local node
[2026-06-05T20:52:02.298615Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.299228Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.302063Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0013] Task initiated on local node
[2026-06-05T20:52:02.363678Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.364306Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.366998Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0004] Task initiated on local node
[2026-06-05T20:52:02.396318Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.396831Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.399279Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0005] Task initiated on local node
[2026-06-05T20:52:02.428800Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.429307Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.431841Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0002] Task initiated on local node
[2026-06-05T20:52:02.493462Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.494009Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.496695Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0002] Task initiated on local node
[2026-06-05T20:52:02.497914Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.498523Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.501400Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0004] Task initiated on local node
[2026-06-05T20:52:02.530528Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.530596Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.562454Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.562932Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.565883Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_002_chr3_0000] Task initiated on local node
[2026-06-05T20:52:02.627367Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.627968Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.630606Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0000] Task initiated on local node
[2026-06-05T20:52:02.635916Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.636395Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.639105Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0001] Task initiated on local node
[2026-06-05T20:52:02.669115Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.669197Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.933442Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.933932Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.936846Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0001] Task initiated on local node
[2026-06-05T20:52:02.998153Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.362549Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.363006Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.365349Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0009] Task initiated on local node
[2026-06-05T20:52:03.396105Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.710360Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.710789Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.712973Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0010] Task initiated on local node
[2026-06-05T20:52:03.742774Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:09.357931Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:09.358352Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:52:09.360905Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0003] Task initiated on local node
[2026-06-05T20:52:09.390331Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:09.390603Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:09.390730Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-05T20:52:09.391228Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-05T20:52:09.392744Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-05T20:52:09.393439Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-05T20:52:09.396137Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-05T20:52:09.397218Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-05T20:52:09.425239Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:09.425292Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:09.425312Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:09.425479Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-05T20:52:09.427053Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-05T20:52:09.428796Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-05T20:52:09.429805Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-05T20:52:09.459528Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:09.459577Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:09.459741Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-05T20:52:09.461800Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-05T20:52:09.491657Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:14.113162Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-05T20:52:28.233410Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-05T20:52:28.233410Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] 
[2026-06-05T20:52:28.233410Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-05T20:52:28.233459Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] 
[2026-06-05T20:52:28.233466Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-05T20:52:28.233474Z] [nf-8011db7a17387f75dacdeef708b7b223-a4662-9knj9] [588_1] [WorkflowRunner] Elapsed time for full workflow: 33 sec