File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2e/d0f480141899a2f4ab354afd53dc25/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-7akt5_bq because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:57:02,940 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:57:03,742 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:57:03,908 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:57:05,058 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:57:05,237 - cnv_pipe.batch.run_model - INFO - Processing cluster 1125 with 194 probes
2026-06-05 20:57:05,602 - cnv_pipe.batch.run_model.cluster1125 - INFO - Child process started for cluster 1125 with 194 probes
2026-06-05 20:58:04,598 - cnv_pipe.batch.run_model.cluster1125 - INFO - Child process finished cluster 1125. Wrote cluster_1125_samples.csv and cluster_1125_params.csv
2026-06-05 20:58:04,599 - cnv_pipe.batch.run_model - INFO - Cluster 1125 finished in 59.36 seconds. Status: SUCCESS