mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-84f6ffrw because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:55:09,099 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:55:09,953 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:55:10,119 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:55:11,169 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:55:11,239 - cnv_pipe.batch.run_model - INFO - Processing cluster 499 with 170 probes
2026-06-05 20:55:11,616 - cnv_pipe.batch.run_model.cluster499 - INFO - Child process started for cluster 499 with 170 probes
2026-06-05 20:56:02,863 - cnv_pipe.batch.run_model.cluster499 - INFO - Child process finished cluster 499. Wrote cluster_499_samples.csv and cluster_499_params.csv
2026-06-05 20:56:02,864 - cnv_pipe.batch.run_model - INFO - Cluster 499 finished in 51.62 seconds. Status: SUCCESS