File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/05/0caee3c3282ed7a4096359c76d88b6/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-hbgmxgzz because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:57:49,007 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:57:49,832 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:57:49,999 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:57:50,923 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:57:51,098 - cnv_pipe.batch.run_model - INFO - Processing cluster 1454 with 200 probes
2026-06-05 20:57:51,474 - cnv_pipe.batch.run_model.cluster1454 - INFO - Child process started for cluster 1454 with 200 probes
2026-06-05 20:58:51,635 - cnv_pipe.batch.run_model.cluster1454 - INFO - Child process finished cluster 1454. Wrote cluster_1454_samples.csv and cluster_1454_params.csv
2026-06-05 20:58:51,636 - cnv_pipe.batch.run_model - INFO - Cluster 1454 finished in 60.54 seconds. Status: SUCCESS