File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/89/ca6a70cffeae349c6c5470a365647d/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-vwkq7yz_ because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:55:37,209 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:55:38,207 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:55:38,413 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:55:39,623 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:55:39,698 - cnv_pipe.batch.run_model - INFO - Processing cluster 660 with 138 probes
2026-06-05 20:55:40,148 - cnv_pipe.batch.run_model.cluster660 - INFO - Child process started for cluster 660 with 138 probes
2026-06-05 20:56:29,989 - cnv_pipe.batch.run_model.cluster660 - INFO - Child process finished cluster 660. Wrote cluster_660_samples.csv and cluster_660_params.csv
2026-06-05 20:56:29,990 - cnv_pipe.batch.run_model - INFO - Cluster 660 finished in 50.29 seconds. Status: SUCCESS