File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/22/cf426c79fa75837ce9ce8127237221/.command.log
Size
1019 bytes
Task
DAQ:CONTROL_METRICS:GERMLINE_METRICS:GERMLINE_CNV_METRICS (germline_control_1)
Attempt

Content

View in new tab 
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/control_truth/na12878/na12878_germline_cnv_dels.bed
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/22/cf426c79fa75837ce9ce8127237221/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/22/cf426c79fa75837ce9ce8127237221/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/01/c4d8c89afb816a01c95b246c375ecc/germline_control_1.vcf.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/01/c4d8c89afb816a01c95b246c375ecc/germline_control_1.vcf.gz.tbi
==> STAGING COMPLETE (5 inputs)

[E::bcf_hdr_parse_line] Could not parse the header line: "##ABNORMAL_PLOIDY_CHR=<chr1:0,chr12:0,chr14:0,chr5:0,chr6:0,chr7:0>"
[E::bcf_hdr_parse_line] Could not parse the header line: "##ABNORMAL_PLOIDY_CHR=<chr1:0,chr12:0,chr14:0,chr5:0,chr6:0,chr7:0>"
[E::bcf_hdr_parse_line] Could not parse the header line: "##ABNORMAL_PLOIDY_CHR=<chr1:0,chr12:0,chr14:0,chr5:0,chr6:0,chr7:0>"