mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-zpq788m5 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:54:04,227 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:54:05,039 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:54:05,208 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:54:06,209 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:54:06,280 - cnv_pipe.batch.run_model - INFO - Processing cluster 113 with 189 probes
2026-06-05 20:54:06,664 - cnv_pipe.batch.run_model.cluster113 - INFO - Child process started for cluster 113 with 189 probes
2026-06-05 20:55:04,355 - cnv_pipe.batch.run_model.cluster113 - INFO - Child process finished cluster 113. Wrote cluster_113_samples.csv and cluster_113_params.csv
2026-06-05 20:55:04,356 - cnv_pipe.batch.run_model - INFO - Cluster 113 finished in 58.08 seconds. Status: SUCCESS